Prupe.4G094100_v2.0.a1

Wall-associated receptor kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
OG0000066
Physical Location & Seq
Reverse (-)
4741372 .. 4744411
3040 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G094100.1

Sequence Viewer

Length: 2259 bp
ATGGCCTTCCACTACTGCTTACTTGGGGTGCTTATGCCACTCTCATTGCTAATTGCACAAGCAGCTGCAATAACAGAAGGACCTCAATCAGCCCACCCTAACTGCCCTTACCACTGTGGTAACCTCACAATTCCGTATCCATTTGGCATGGGTGAAGCCTGTTACCTCCGACCAGAATTCAACATCACTTGTGATCAATCCACCCAACCGCCGTCAGCCTACTGGATGGGCGGTATGAACAGGATTACCAACTTTTCTGTGGCTGATGGCGAGTTGCAAATAATGCTAGATGTAGCCATGGATTGTTATGATGATTCGGGTGAGGAAACAGTGGACATCTTTACTTCGCTAGAGCTGCCTCCTCCTTACTGCATGTCCCATACACGAAACAATTTCACCACAGTAGGCTGTGACACTATAGGAACCTTTTTAGGTGAGCGCTCAGGGGATGGAGGCCCAAAGAAAGAAAAGTTCGAAGTCGGCAACAGCGTCACCATGTGTGATGATATTCTTGGCGACGCACTTCCAGACTCTTGCTCTGGAATTGGCTGTTCCCAAGCTTCCATCCCTGGTGGACTGCGAAACATATCCACTTTTCTTCAAAGCCTGACTGTCGGCAATCGAACGGGGATTGATAATCCGTGGTACGCTAAGTACCCTTGCAGCTATGCCTTCATTGTGGAACAAGGCAACTTCTCATTCAACCCCAACACAACTTTTCAAGAACTCAACAACTCAAGGCAGCTTCCAGCCGTTCTGAATTGGGCAGTTGAGGGTGAGTCATGTCATGCAGCTCAACAGAACCACAACTTTCCATGCAAGGAAAATGCCAAGTGTGTCGAACGGACGACCATCGGTGGTCCGCCTGCTTACATCTGCCAGTGCTCGTCAGGTTATCGAGGGAACCCGTACCTCCTAGATAGTTGCCAAGATATTGATGAGTGCAAGGAGTCAAACCCTTGCAGTATTGGAACGTGCATAAATTTACCTGGAGATTATTCTTGTAAATGTCCCGAAGGGTACAAAAACGACGGCATGAATCAAAAGAGTTGCATCAAACACAATCCCAGCTCAGACCAAAAAAAACATAATCCCAGCAATCGATGGAAGATCATTCTCCTGGCTGTTATTTCATTGGGTGTCACTAGTGCAAGCCTCTTGGTTTTACTAATTGGAATTTCATGGATATATTGGGGAATGCATAGAAGAAGGCTCATGAAACTCAAAGAAAAATACTTTAAAGAAAATGGTGGCTTATTGTTACAACAACAACTTGCTAGTCAAGGAAGTTCCATGGAGACAACCAAAATTTTTGCAGCAGAAGCACTTGAAAAGGCCACAGACAATTACCATGAAAGTAGAGTTGTTGGTGAAGGGGGTTATGGAATAGTTTACAAAGGAATATTTGCAGATAACAAAGTGGTTGCCATAAAGAAGTCAAAAGTTGGCGTTCCAGCTCAGAAAGAGCAGTTTGTAAATGAGGTGATTGTTCTTTCTCAAATCAATCATAGAAATGTAGTGAGGCTTCTAGGTTGCTGTTTAGAGACACCGGTGCCTTTACTAGTTTATGAATACATCACCAATGACACTCTTTTTCATCACATTCATGGTAAAAAGAGCGAAGGGTTATCACTTTCATGGGAATTAAGATTGAAGATTGCCGCAGAAACTGCAGGAGCTTTAGCATACTTACACTCCTCTACTTCTACACCAATCATACATCGAGATGTGAAATCAATGAATATACTGTTAGATGACAATTACACGGCAAAAGTGTCGGATTTTGGTGCTTCGCGCTTAGTTCCTATGGATCAAACTCAAGAAACAACTCTAGTGCAAGGGACACGCGGATACTTAGATCCTGAATACCTCCATTCAAACCGACTAACACAAAAGAGTGATGTCTATAGTTTTGGAGTTGTCCTGATGGAGCTACTAACAAGCAAATTAGCTGAAGGAAATATTGAGACCCTAAAAAATGTAGCGAATCTCGCAAAAAGATGTGTCAGTTTAAAAGGGGAGGAAAGACCTACCATGAAAGAGGTAGCCTCAGAGCTAGAGGGGATGAGAATAATGGCAAAGCATCCATTGGAAAGTTCTAATTACGGTCCTGAAGAGACTGTGCACTTGCTAGGGTCACCTTCAAACACGAATTCTGTGGATGTTAGAGGCGATTGTGGTTCTAGTACTACTGGTGCAACTTATGGGCATGACAGTATGCAAATCCAAATGTTAATGTCATATAATGATGGGAGATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
EGF EGF_CA GUB_WAK_bind Pkinase Pkinase_Tyr WAK

Protein Analysis

753

Amino Acids

82.65

Weight (kDa)

5.71

Isoelectric Point (pI)

39.47

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000066)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G21210 AT1G21230 AT1G21240 AT1G21240 AT1G21245 AT1G21250 AT1G21270 AT1G22720 AT3G25490
fragaria_vesca FvH4_2g35051 FvH4_2g35051 FvH4_2g35060 FvH4_3g10281 FvH4_3g10285 FvH4_3g10286 FvH4_3g10311 FvH4_3g10311 FvH4_3g10320 FvH4_3g10332 FvH4_3g10340 FvH4_3g10350 FvH4_3g10360 FvH4_3g10390 FvH4_3g10412 FvH4_3g10413 FvH4_3g10461 FvH4_3g10462 FvH4_3g10470 FvH4_3g10510 FvH4_3g10520 FvH4_3g10530 FvH4_3g10550 FvH4_3g10560 FvH4_3g10611 FvH4_3g11730 FvH4_6g53140 FvH4_6g53142 FvH4_7g31880 FvH4_7g31910 FvH4_7g31920
malus_domestica MD05G1269900.v1.1 MD05G1270000.v1.1 MD05G1270200.v1.1 MD05G1270400.v1.1 MD05G1270500.v1.1 MD05G1270600.v1.1 MD05G1270800.v1.1 MD05G1270900.v1.1 MD07G1183800.v1.1 MD08G1107600.v1.1 MD10G1248500.v1.1 MD10G1249200.v1.1 MD10G1249500.v1.1 MD10G1250000.v1.1 MD10G1250500.v1.1 MD10G1250900.v1.1 MD10G1251200.v1.1 MD10G1251400.v1.1 MD13G1004600.v1.1 MD15G1088400.v1.1
prunus_persica Prupe.1G442400_v2.0.a1 Prupe.1G442500_v2.0.a1 Prupe.2G223400_v2.0.a1 Prupe.4G091900_v2.0.a1 Prupe.4G093200_v2.0.a1 Prupe.4G093300_v2.0.a1 Prupe.4G093400_v2.0.a1 Prupe.4G093500_v2.0.a1 Prupe.4G094100_v2.0.a1 Prupe.4G094200_v2.0.a1 Prupe.4G094300_v2.0.a1 Prupe.6G358300_v2.0.a1
pyrus_communis pycom08g08990 pycom10g20660 pycom10g20670 pycom10g20680 pycom10g20710 pycom10g20740 pycom13g00400 pycom15g08290
rosa_chinensis RchiOBHm_Chr1g0326861 RchiOBHm_Chr1g0326871 RchiOBHm_Chr1g0331391 RchiOBHm_Chr1g0336911 RchiOBHm_Chr1g0364001 RchiOBHm_Chr2g0174541 RchiOBHm_Chr2g0175041 RchiOBHm_Chr2g0175101 RchiOBHm_Chr2g0175121 RchiOBHm_Chr3g0486331 RchiOBHm_Chr5g0015581 RchiOBHm_Chr5g0016551 RchiOBHm_Chr5g0016561 RchiOBHm_Chr5g0016581 RchiOBHm_Chr5g0016601 RchiOBHm_Chr5g0016611 RchiOBHm_Chr5g0016641 RchiOBHm_Chr5g0016661 RchiOBHm_Chr5g0016691 RchiOBHm_Chr5g0016701 RchiOBHm_Chr5g0016731 RchiOBHm_Chr5g0016741 RchiOBHm_Chr5g0016811 RchiOBHm_Chr5g0016841 RchiOBHm_Chr5g0016871 RchiOBHm_Chr5g0016881 RchiOBHm_Chr5g0016931 RchiOBHm_Chr5g0017021 RchiOBHm_Chr5g0017041 RchiOBHm_Chr5g0017071 RchiOBHm_Chr5g0017091 RchiOBHm_Chr5g0017121 RchiOBHm_Chr5g0017141 RchiOBHm_Chr5g0017291 RchiOBHm_Chr5g0017321 RchiOBHm_Chr5g0017401 RchiOBHm_Chr5g0019001 RchiOBHm_Chr5g0019071 RchiOBHm_Chr5g0028941 RchiOBHm_Chr5g0052141 RchiOBHm_Chr5g0054721 RchiOBHm_Chr5g0054801 RchiOBHm_Chr5g0054931 RchiOBHm_Chr5g0054941 RchiOBHm_Chr6g0259291 RchiOBHm_Chr6g0292991 RchiOBHm_Chr6g0306911
rosa_laevigata RLG00000009465 RLG00000009468 RLG00000010755 RLG00000011976 RLG00000014541 RLG00000014542 RLG00000015169 RLG00000022308 RLG00000027529 RLG00000029324 RLG00000030244 RLG00000030245 RLG00000032210 RLG00000032211 RLG00000032257 RLG00000032259 RLG00000032260 RLG00000032261 RLG00000032262 RLG00000032268 RLG00000032269 RLG00000032272 RLG00000032282 RLG00000032283 RLG00000032308 RLG00000032413 RLG00000033129 RLG00000034945
rosa_multiflora Rmu_co8241929.1_g000001 Rmu_co8269227.1_g000001 Rmu_co8461259.1_g000001 Rmu_co8495385.1_g000001 Rmu_sc0000028.1_g000003 Rmu_sc0000083.1_g000009 Rmu_sc0000083.1_g000010 Rmu_sc0000083.1_g000031 Rmu_sc0000083.1_g000043 Rmu_sc0000083.1_g000046 Rmu_sc0000083.1_g000047 Rmu_sc0000563.1_g000024 Rmu_sc0000842.1_g000012 Rmu_sc0001235.1_g000001 Rmu_sc0001235.1_g000005 Rmu_sc0001235.1_g000009 Rmu_sc0001235.1_g000015 Rmu_sc0001235.1_g000016 Rmu_sc0001235.1_g000017 Rmu_sc0001473.1_g000036 Rmu_sc0001607.1_g000016 Rmu_sc0001788.1_g000006 Rmu_sc0002018.1_g000008 Rmu_sc0002028.1_g000001 Rmu_sc0002680.1_g000011 Rmu_sc0002798.1_g000023 Rmu_sc0002886.1_g000023 Rmu_sc0002989.1_g000012 Rmu_sc0003064.1_g000009 Rmu_sc0003382.1_g000006 Rmu_sc0003630.1_g000002 Rmu_sc0003630.1_g000047 Rmu_sc0003630.1_g000066 Rmu_sc0003630.1_g000067 Rmu_sc0003649.1_g000010 Rmu_sc0003688.1_g000005 Rmu_sc0003920.1_g000007 Rmu_sc0004765.1_g000007 Rmu_sc0004765.1_g000008 Rmu_sc0004920.1_g000011 Rmu_sc0005223.1_g000008 Rmu_sc0005223.1_g000010 Rmu_sc0005223.1_g000015 Rmu_sc0005223.1_g000016 Rmu_sc0005319.1_g000014 Rmu_sc0005319.1_g000015 Rmu_sc0005319.1_g000018 Rmu_sc0005319.1_g000019 Rmu_sc0005319.1_g000025 Rmu_sc0005418.1_g000007 Rmu_sc0005418.1_g000012 Rmu_sc0006106.1_g000011 Rmu_sc0006914.1_g000012 Rmu_sc0007023.1_g000001 Rmu_sc0007662.1_g000001 Rmu_sc0007920.1_g000002 Rmu_sc0007920.1_g000013 Rmu_sc0008053.1_g000016 Rmu_sc0008053.1_g000017 Rmu_sc0008053.1_g000018 Rmu_sc0008053.1_g000023 Rmu_sc0008053.1_g000050 Rmu_sc0009042.1_g000007 Rmu_sc0009042.1_g000008 Rmu_sc0010642.1_g000008 Rmu_sc0011109.1_g000002 Rmu_sc0011314.1_g000006 Rmu_sc0011974.1_g000006 Rmu_sc0012179.1_g000009 Rmu_sc0015169.1_g000001 Rmu_sc0016368.1_g000002 Rmu_sc0022659.1_g000001 Rmu_sc0027371.1_g000001 Rmu_sc0028213.1_g000001 Rmu_sc0034526.1_g000001 Rmu_sc0039366.1_g000002 Rmu_ssc0000050.1_g000084 Rmu_ssc0000050.1_g000088 Rmu_ssc0000167.1_g000017
rosa_roxburghii Rroxscaffold_1G00011340 Rroxscaffold_1G00025710 Rroxscaffold_1G00025870 Rroxscaffold_1G00026070 Rroxscaffold_1G00026170 Rroxscaffold_1G00026200 Rroxscaffold_1G00026270 Rroxscaffold_1G00050950 Rroxscaffold_1G00058900 Rroxscaffold_1G00060040 Rroxscaffold_1G00060060 Rroxscaffold_1G00060070 Rroxscaffold_1G00060080 Rroxscaffold_1G00060110 Rroxscaffold_1G00060120 Rroxscaffold_1G00060140 Rroxscaffold_1G00060170 Rroxscaffold_1G00060210 Rroxscaffold_1G00060220 Rroxscaffold_1G00060240 Rroxscaffold_1G00060250 Rroxscaffold_1G00060260 Rroxscaffold_1G00060300 Rroxscaffold_1G00060320 Rroxscaffold_1G00060330 Rroxscaffold_1G00060900 Rroxscaffold_1G00060920 Rroxscaffold_1G00073980 Rroxscaffold_2G00077560 Rroxscaffold_2G00077580 Rroxscaffold_2G00146990 Rroxscaffold_3G00236200 Rroxscaffold_3G00236210 Rroxscaffold_3G00236220 Rroxscaffold_4G00292760 Rroxscaffold_4G00315200 Rroxscaffold_4G00315240 Rroxscaffold_4G00326240 Rroxscaffold_4G00328980 Rroxscaffold_5G00341890 Rroxscaffold_7G00161350 Rroxscaffold_7G00174490 Rroxscaffold_7G00206550
rosa_rugosa Rorug01G0093000 Rorug01G0093100 Rorug01G0128800 Rorug01G0312000 Rorug01G0312000 Rorug02G0581100 Rorug03G0224600 Rorug05G0028500 Rorug05G0032700 Rorug05G0032800 Rorug05G0032900 Rorug05G0032900 Rorug05G0033000 Rorug05G0033100 Rorug05G0033300 Rorug05G0033400 Rorug05G0033900 Rorug05G0034900 Rorug05G0035000 Rorug05G0046900 Rorug05G0047500 Rorug05G0047500 Rorug05G0111600 Rorug05G0287900 Rorug05G0288700 Rorug05G0586900 Rorug06G0231700 Rorug06G0354300 Rorug06G0354400
rosa_samantha Rh1DG122200 Rh2DG686800 Rh5BG136600 Rh6AG344500 Rh6BG351900 Rh6CG359000 Rh6CG359100 Rh6CG387600 Rh6CG480500 Rh6DG344600 Rh6DG467400
rosa_wichuraiana Rw0G010250 Rw0G014820 Rw0G021400 Rw0G023100 Rw1G009450 Rw1G012100 Rw1G012180 Rw1G028360 Rw2G054260 Rw3G024370 Rw3G024420 Rw3G024470 Rw5G010850 Rw5G011010 Rw5G011020 Rw5G011050 Rw5G011080 Rw5G011120 Rw5G012300 Rw5G018470 Rw5G033830 Rw6G008930 Rw6G030070

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1552
AccII CGCG 2 cut(s) 1795, 1848
AciI CCGC 5 cut(s) 209, 231, 863, 1662, 1848
AclWI GGATC 2 cut(s) 1818, 1853
AcsI RAATTY 5 cut(s) 176, 982, 1176, 1308, 2152
AcuI CTGAAG 2 cut(s) 1974, 2133
AdeI CACNNNGTG 1 cut(s) 498
AfaI GTAC 5 cut(s) 647, 656, 911, 1022, 2188
AfeI AGCGCT 1 cut(s) 440
AgeI ACCGGT 1 cut(s) 1549
AgsI TTSAA 8 cut(s) 181, 602, 703, 722, 1331, 1654, 1878, 2145
AhlI ACTAGT 2 cut(s) 1145, 1561
AjnI CCWGG 3 cut(s) 568, 988, 1119
Alw21I GWGCWC 2 cut(s) 887, 2127
Alw26I GTCTC 4 cut(s) 1292, 1538, 1961, 2111
Alw44I GTGCAC 1 cut(s) 2123
AlwI GGATC 2 cut(s) 1818, 1853
AlwNI CAGNNNCTG 1 cut(s) 1670
Aor51HI AGCGCT 1 cut(s) 440
AoxI GGCC 3 cut(s) 3, 454, 1335
ApaLI GTGCAC 1 cut(s) 2123
ApeKI GCWGC 7 cut(s) 62, 65, 355, 663, 742, 791, 1316
ApoI RAATTY 5 cut(s) 176, 982, 1176, 1308, 2152
AsiGI ACCGGT 1 cut(s) 1549
AspLEI GCGC 2 cut(s) 441, 1797
AspS9I GGNCC 4 cut(s) 80, 455, 860, 2108
AsuII TTCGAA 1 cut(s) 474
AvaII GGWCC 3 cut(s) 80, 860, 2108
BaeGI GKGCMC 1 cut(s) 2127
BanI GGYRCC 1 cut(s) 1552
BarI GAAGNNNNNNTAC 2 cut(s) 1509, 1541
Bbv12I GWGCWC 2 cut(s) 887, 2127
BbvI GCAGC 7 cut(s) 52, 74, 342, 675, 754, 803, 1328
BccI CCATC 8 cut(s) 220, 260, 443, 572, 860, 1098, 1921, 2243
BceAI ACGGC 4 cut(s) 196, 737, 1048, 1782
BcgI CGANNNNNNTGC 2 cut(s) 1758, 1792
BciT130I CCWGG 3 cut(s) 570, 990, 1121
BciVI GTATCC 2 cut(s) 147, 1844
BclI TGATCA 1 cut(s) 193
BcoDI GTCTC 4 cut(s) 1292, 1538, 1961, 2111
BcuI ACTAGT 2 cut(s) 1145, 1561
BfmI CTRYAG 3 cut(s) 417, 1671, 1906
BfoI RGCGCY 1 cut(s) 442
BfuI GTATCC 2 cut(s) 147, 1844
BisI GCNGC 8 cut(s) 63, 66, 356, 664, 743, 792, 1317, 1662
BlsI GCNGC 8 cut(s) 64, 67, 357, 665, 744, 793, 1318, 1663
BmcAI AGTACT 1 cut(s) 2188
Bme1390I CCNGG 3 cut(s) 570, 990, 1121
Bme18I GGWCC 3 cut(s) 80, 860, 2108
BmgT120I GGNCC 4 cut(s) 80, 455, 860, 2108
BmiI GGNNCC 3 cut(s) 424, 905, 1554
BmrFI CCNGG 3 cut(s) 570, 990, 1121
BmsI GCATC 2 cut(s) 1062, 2092
BplI GAGNNNNNCTC 2 cut(s) 2033, 2065
BpmI CTGGAG 1 cut(s) 1011
Bpu10I CCTNAGC 1 cut(s) 442
Bpu14I TTCGAA 1 cut(s) 474
BpuEI CTTGAG 2 cut(s) 721, 1803
Bsa29I ATCGAT 1 cut(s) 1102
BsaI GGTCTC 1 cut(s) 1961
BsaJI CCNNGG 4 cut(s) 297, 568, 641, 1293
BsaWI WCCGGW 1 cut(s) 1549
BsaXI ACNNNNNCTCC 2 cut(s) 1679, 1709
Bse118I RCCGGY 1 cut(s) 1549
Bse1I ACTGG 3 cut(s) 227, 880, 2197
Bse3DI GCAATG 1 cut(s) 44
BseBI CCWGG 3 cut(s) 570, 990, 1121
BseCI ATCGAT 1 cut(s) 1102
BseDI CCNNGG 4 cut(s) 297, 568, 641, 1293
BseGI GGATG 6 cut(s) 231, 454, 564, 2070, 2083, 2167
BseMI GCAATG 1 cut(s) 44
BseMII CTCAG 4 cut(s) 456, 1086, 1472, 2064
BseNI ACTGG 3 cut(s) 227, 880, 2197
BseRI GAGGAG 2 cut(s) 351, 1687
BseSI GKGCMC 1 cut(s) 2127
BseXI GCAGC 7 cut(s) 52, 74, 342, 675, 754, 803, 1328
BseYI CCCAGC 2 cut(s) 1067, 1094
Bsh1236I CGCG 2 cut(s) 1795, 1848
BshFI GGCC 3 cut(s) 5, 456, 1337
BshNI GGYRCC 1 cut(s) 1552
BshTI ACCGGT 1 cut(s) 1549
BshVI ATCGAT 1 cut(s) 1102
BsiHKAI GWGCWC 2 cut(s) 887, 2127
BsiSI CCGG 1 cut(s) 1550
BslFI GGGAC 3 cut(s) 361, 996, 1855
BsmAI GTCTC 4 cut(s) 1292, 1538, 1961, 2111
BsmFI GGGAC 3 cut(s) 361, 996, 1855
BsmI GAATGC 1 cut(s) 1203
BsnI GGCC 3 cut(s) 5, 456, 1337
Bso31I GGTCTC 1 cut(s) 1961
Bsp119I TTCGAA 1 cut(s) 474
Bsp1286I GDGCHC 2 cut(s) 887, 2127
Bsp143I GATC 4 cut(s) 193, 1110, 1810, 1858
Bsp19I CCATGG 2 cut(s) 297, 1293
BspACI CCGC 5 cut(s) 209, 231, 863, 1662, 1848
BspANI GGCC 3 cut(s) 5, 456, 1337
BspCNI CTCAG 4 cut(s) 455, 1085, 1471, 2063
BspDI ATCGAT 1 cut(s) 1102
BspFNI CGCG 2 cut(s) 1795, 1848
BspHI TCATGA 1 cut(s) 1215
BspLI GGNNCC 3 cut(s) 424, 905, 1554
BspMAI CTGCAG 1 cut(s) 1675
BspPI GGATC 2 cut(s) 1818, 1853
BspT104I TTCGAA 1 cut(s) 474
BspT107I GGYRCC 1 cut(s) 1552
BspTNI GGTCTC 1 cut(s) 1961
BsrDI GCAATG 1 cut(s) 44
BsrFI RCCGGY 1 cut(s) 1549
BsrI ACTGG 3 cut(s) 227, 880, 2197
BssAI RCCGGY 1 cut(s) 1549
BssECI CCNNGG 4 cut(s) 297, 568, 641, 1293
BssMI GATC 4 cut(s) 193, 1110, 1810, 1858
BssT1I CCWWGG 2 cut(s) 297, 1293
Bst2UI CCWGG 3 cut(s) 570, 990, 1121
Bst4CI ACNGT 8 cut(s) 116, 331, 403, 613, 1749, 2108, 2122, 2216
Bst6I CTCTTC 1 cut(s) 2109
BstAPI GCANNNNNTGC 2 cut(s) 283, 1670
BstBI TTCGAA 1 cut(s) 474
BstC8I GCNNGC 2 cut(s) 867, 1153
BstDEI CTNAG 7 cut(s) 442, 651, 1072, 1458, 1798, 1855, 2050
BstDSI CCRYGG 3 cut(s) 297, 641, 1293
BstEII GGTNACC 2 cut(s) 119, 2136
BstF5I GGATG 6 cut(s) 231, 454, 564, 2070, 2083, 2167
BstFNI CGCG 2 cut(s) 1795, 1848
BstH2I RGCGCY 1 cut(s) 442
BstHHI GCGC 2 cut(s) 441, 1797
BstKTI GATC 4 cut(s) 196, 1113, 1813, 1861
BstMAI GTCTC 4 cut(s) 1292, 1538, 1961, 2111
BstMBI GATC 4 cut(s) 193, 1110, 1810, 1858
BstMWI GCNNNNNNNGC 6 cut(s) 62, 283, 355, 1322, 1670, 1991
BstNI CCWGG 3 cut(s) 570, 990, 1121
BstNSI RCATGY 1 cut(s) 376
BstPI GGTNACC 2 cut(s) 119, 2136
BstSCI CCNGG 3 cut(s) 568, 988, 1119
BstSFI CTRYAG 3 cut(s) 417, 1671, 1906
BstSLI GKGCMC 1 cut(s) 2127
BstUI CGCG 2 cut(s) 1795, 1848
BstV1I GCAGC 7 cut(s) 52, 74, 342, 675, 754, 803, 1328
BstX2I RGATCY 1 cut(s) 1858
BstYI RGATCY 1 cut(s) 1858
Bsu15I ATCGAT 1 cut(s) 1102
BsuI GTATCC 2 cut(s) 147, 1844
BsuRI GGCC 3 cut(s) 5, 456, 1337
BsuTUI ATCGAT 1 cut(s) 1102
BtgI CCRYGG 3 cut(s) 297, 641, 1293
BtsCI GGATG 6 cut(s) 231, 454, 564, 2070, 2083, 2167
BtsIMutI CAGTG 3 cut(s) 112, 336, 887
Cac8I GCNNGC 2 cut(s) 867, 1153
CaiI CAGNNNCTG 1 cut(s) 1670
CciI TCATGA 1 cut(s) 1215
CfoI GCGC 2 cut(s) 441, 1797
Cfr10I RCCGGY 1 cut(s) 1549
Cfr13I GGNCC 4 cut(s) 80, 455, 860, 2108
ClaI ATCGAT 1 cut(s) 1102
CseI GACGC 2 cut(s) 478, 527
Csp6I GTAC 5 cut(s) 646, 655, 910, 1021, 2187
CspAI ACCGGT 1 cut(s) 1549
CspCI CAANNNNNGTGG 2 cut(s) 27, 62
CviQI GTAC 5 cut(s) 646, 655, 910, 1021, 2187
DdeI CTNAG 7 cut(s) 442, 651, 1072, 1458, 1798, 1855, 2050
DpnI GATC 4 cut(s) 195, 1112, 1812, 1860
DpnII GATC 4 cut(s) 193, 1110, 1810, 1858
DraI TTTAAA 2 cut(s) 1240, 2013
DraIII CACNNNGTG 1 cut(s) 498
Eam1104I CTCTTC 1 cut(s) 2109
EarI CTCTTC 1 cut(s) 2109
EciI GGCGGA 1 cut(s) 852
Eco130I CCWWGG 2 cut(s) 297, 1293
Eco31I GGTCTC 1 cut(s) 1961
Eco47I GGWCC 3 cut(s) 80, 860, 2108
Eco47III AGCGCT 1 cut(s) 440
Eco57I CTGAAG 2 cut(s) 1974, 2133
Eco91I GGTNACC 2 cut(s) 119, 2136
EcoO109I RGGNCCY 1 cut(s) 80
EcoO65I GGTNACC 2 cut(s) 119, 2136
EcoRI GAATTC 2 cut(s) 176, 2152
EcoRII CCWGG 3 cut(s) 568, 988, 1119
EcoT14I CCWWGG 2 cut(s) 297, 1293
EcoT22I ATGCAT 1 cut(s) 1203
ErhI CCWWGG 2 cut(s) 297, 1293
FaqI GGGAC 3 cut(s) 361, 996, 1855
FbaI TGATCA 1 cut(s) 193
Fnu4HI GCNGC 8 cut(s) 63, 66, 356, 664, 743, 792, 1317, 1662
FokI GGATG 6 cut(s) 238, 461, 551, 2070, 2077, 2174
Fsp4HI GCNGC 8 cut(s) 63, 66, 356, 664, 743, 792, 1317, 1662
GlaI GCGC 2 cut(s) 440, 1796
GluI GCNGC 8 cut(s) 63, 66, 356, 664, 743, 792, 1317, 1662
GsaI CCCAGC 2 cut(s) 1071, 1098
GsuI CTGGAG 1 cut(s) 1011
HaeII RGCGCY 1 cut(s) 442
HaeIII GGCC 3 cut(s) 5, 456, 1337
HapII CCGG 1 cut(s) 1550
HgaI GACGC 2 cut(s) 478, 527
HhaI GCGC 2 cut(s) 441, 1797
Hin6I GCGC 2 cut(s) 439, 1795
HinP1I GCGC 2 cut(s) 439, 1795
HindIII AAGCTT 1 cut(s) 558
HinfI GANTC 6 cut(s) 314, 530, 779, 950, 1039, 1987
HpaII CCGG 1 cut(s) 1550
Hpy166II GTNNAC 4 cut(s) 334, 575, 1393, 2125
Hpy188I TCNGA 6 cut(s) 170, 759, 1075, 1461, 1780, 2053
Hpy8I GTNNAC 4 cut(s) 334, 575, 1393, 2125
Hpy99I CGWCG 2 cut(s) 521, 1034
HpyAV CCTTC 9 cut(s) 16, 71, 682, 1010, 1203, 1367, 1616, 1949, 2151
HpyCH4III ACNGT 8 cut(s) 116, 331, 403, 613, 1749, 2108, 2122, 2216
HpyCH4IV ACGT 1 cut(s) 974
HpyF10VI GCNNNNNNNGC 6 cut(s) 62, 283, 355, 1322, 1670, 1991
HpyF3I CTNAG 7 cut(s) 442, 651, 1072, 1458, 1798, 1855, 2050
HpySE526I ACGT 1 cut(s) 974
HspAI GCGC 2 cut(s) 439, 1795
Ksp22I TGATCA 1 cut(s) 193
Kzo9I GATC 4 cut(s) 193, 1110, 1810, 1858
LmnI GCTCC 2 cut(s) 1676, 1930
Lsp1109I GCAGC 7 cut(s) 52, 74, 342, 675, 754, 803, 1328
LweI GCATC 2 cut(s) 1062, 2092
MaeII ACGT 1 cut(s) 974
MaeIII GTNAC 7 cut(s) 119, 161, 410, 490, 1141, 1260, 2136
MalI GATC 4 cut(s) 195, 1112, 1812, 1860
MboI GATC 4 cut(s) 193, 1110, 1810, 1858
MboII GAAGA 5 cut(s) 590, 1120, 1218, 1666, 2126
MflI RGATCY 1 cut(s) 1858
MhlI GDGCHC 2 cut(s) 887, 2127
MlyI GAGTC 3 cut(s) 524, 788, 959
MmeI TCCRAC 2 cut(s) 193, 1758
Mph1103I ATGCAT 1 cut(s) 1203
MseI TTAA 4 cut(s) 1239, 1646, 2012, 2234
MslI CAYNNNNRTG 4 cut(s) 1512, 1605, 1636, 1725
MspA1I CMGCKG 1 cut(s) 65
MspI CCGG 1 cut(s) 1550
MspR9I CCNGG 3 cut(s) 570, 990, 1121
Mva1269I GAATGC 1 cut(s) 1203
MvaI CCWGG 3 cut(s) 570, 990, 1121
MvnI CGCG 2 cut(s) 1795, 1848
MwoI GCNNNNNNNGC 6 cut(s) 62, 283, 355, 1322, 1670, 1991
NcoI CCATGG 2 cut(s) 297, 1293
NdeII GATC 4 cut(s) 193, 1110, 1810, 1858
NlaIV GGNNCC 3 cut(s) 424, 905, 1554
NmuCI GTSAC 4 cut(s) 410, 490, 1141, 2136
NsiI ATGCAT 1 cut(s) 1203
NspI RCATGY 1 cut(s) 376
NspV TTCGAA 1 cut(s) 474
PagI TCATGA 1 cut(s) 1215
PcsI WCGNNNNNNNCGW 1 cut(s) 486
PctI GAATGC 1 cut(s) 1203
PfeI GAWTC 3 cut(s) 314, 1039, 1987
PinAI ACCGGT 1 cut(s) 1549
PkrI GCNGC 8 cut(s) 64, 67, 357, 665, 744, 793, 1318, 1663
PleI GAGTC 3 cut(s) 524, 787, 958
PpsI GAGTC 3 cut(s) 524, 787, 958
PpuMI RGGWCCY 1 cut(s) 80
Psp5II RGGWCCY 1 cut(s) 80
Psp6I CCWGG 3 cut(s) 568, 988, 1119
PspEI GGTNACC 2 cut(s) 119, 2136
PspFI CCCAGC 2 cut(s) 1067, 1094
PspGI CCWGG 3 cut(s) 568, 988, 1119
PspN4I GGNNCC 3 cut(s) 424, 905, 1554
PspPI GGNCC 4 cut(s) 80, 455, 860, 2108
PspPPI RGGWCCY 1 cut(s) 80
PstI CTGCAG 1 cut(s) 1675
PstNI CAGNNNCTG 1 cut(s) 1670
PsuI RGATCY 1 cut(s) 1858
PvuII CAGCTG 1 cut(s) 65
RsaI GTAC 5 cut(s) 647, 656, 911, 1022, 2188
RsaNI GTAC 5 cut(s) 646, 655, 910, 1021, 2187
RseI CAYNNNNRTG 4 cut(s) 1512, 1605, 1636, 1725
SaqAI TTAA 4 cut(s) 1239, 1646, 2012, 2234
SatI GCNGC 8 cut(s) 63, 66, 356, 664, 743, 792, 1317, 1662
Sau3AI GATC 4 cut(s) 193, 1110, 1810, 1858
Sau96I GGNCC 4 cut(s) 80, 455, 860, 2108
ScaI AGTACT 1 cut(s) 2188
SchI GAGTC 3 cut(s) 524, 788, 959
ScrFI CCNGG 3 cut(s) 570, 990, 1121
SduI GDGCHC 2 cut(s) 887, 2127
SfaNI GCATC 2 cut(s) 1062, 2092
SfcI CTRYAG 3 cut(s) 417, 1671, 1906
SfuI TTCGAA 1 cut(s) 474
SgrAI CRCCGGYG 1 cut(s) 1549
SinI GGWCC 3 cut(s) 80, 860, 2108
SmiMI CAYNNNNRTG 4 cut(s) 1512, 1605, 1636, 1725
SmlI CTYRAG 2 cut(s) 736, 1818
SmoI CTYRAG 2 cut(s) 736, 1818
SpeI ACTAGT 2 cut(s) 1145, 1561
SsiI CCGC 5 cut(s) 209, 231, 863, 1662, 1848
SspI AATATT 2 cut(s) 1404, 1963
StyD4I CCNGG 3 cut(s) 568, 988, 1119
StyI CCWWGG 2 cut(s) 297, 1293
TaaI ACNGT 8 cut(s) 116, 331, 403, 613, 1749, 2108, 2122, 2216
TaiI ACGT 1 cut(s) 977
TaqI TCGA 6 cut(s) 474, 622, 840, 898, 1102, 1723
TatI WGTACW 1 cut(s) 2186
TauI GCSGC 1 cut(s) 1664
TfiI GAWTC 3 cut(s) 314, 1039, 1987
Tru1I TTAA 4 cut(s) 1239, 1646, 2012, 2234
Tru9I TTAA 4 cut(s) 1239, 1646, 2012, 2234
TscAI CASTG 3 cut(s) 119, 336, 887
TseFI GTSAC 4 cut(s) 410, 490, 1141, 2136
TseI GCWGC 7 cut(s) 62, 65, 355, 663, 742, 791, 1316
Tsp45I GTSAC 4 cut(s) 410, 490, 1141, 2136
TspGWI ACGGA 3 cut(s) 123, 630, 859
TspRI CASTG 3 cut(s) 119, 336, 887
VneI GTGCAC 1 cut(s) 2123
VpaK11BI GGWCC 3 cut(s) 80, 860, 2108
XapI RAATTY 5 cut(s) 176, 982, 1176, 1308, 2152
XceI RCATGY 1 cut(s) 376
XcmI CCANNNNNNNNNTGG 1 cut(s) 256
ZrmI AGTACT 1 cut(s) 2188
Zsp2I ATGCAT 1 cut(s) 1203
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.