Prupe.4G093400_v2.0.a1

Wall-associated receptor kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
OG0000066
Physical Location & Seq
Reverse (-)
4705881 .. 4708801
2921 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G093400.1

Sequence Viewer

Length: 2247 bp
ATGGCCTTACGTGGGGATGGGAGGATGCTCGTTATGCAAGTAATGATATTGATGAGACTGGTTGTAAATCCAACAGCAGCAACAGCTCAAGCCCGGCCTAATTGCCAAGACAAATGTGGTAACCTCACAATCCCATACCCATTTGGCATGGGTGAAGGCTGTTACCTCCGACCAGAATTCAACATCACTTGTAATCAATCCGCCCAACCCCCGTCAGCCCACTGGATGGGCGGTACGAACAGGATTACTAACTTTTCTGTCGCTGATGGCGAGTTGCAAATAATGCTAGACGTAGCCACGGCTTGTTATGACGATTCGGGTGAGGAAACAGAGGACAGCTCTACTTGGCTAGAGCTGCCTCCTCCTTACAGCATGTCCCATACACAAAACAATTTCACCACAGTTGGCTGTGACACTCTAGGAATCTTTGTAGGTGAGCGCTCAGGGGATGGAGGCCCAAAGAAAGAAAAGGTCAAAGCCGGCAACAGCGTCACCTTGTGTGGTGATATTCTTGGCGACGCACTTCCAGACTCTTGCTCTGGATTTGGCTGTTCCCAAGCTTCCATCCCTGGTGGACTGCGAAACATTTCCACTTTTCTTCAAAGCCTGACTACCGGCAATCGAACGGGGATTTATAATCCGTGGTACGCTAAGTACCCTTGCAGCTATGCCTTCATTGTGGAACAAGGCAACTTCTCATTCAACCCCAACACAACTTTTCAAGAACTCAACAACTCAAGGCAGCTTCCAGCAGTTCTGAATTGGGCAGTTGAGGGTGAGTCATGTGATGCAGCTCAACAGAACCCCAACTTTCCATGTAAGGAAAATACCAAGTGTGTTGAACGGACGACCATCGGTGGTCCGCCTGCTTACATTTGCCAGTGCTCGTCAGATATTGATGAGTGCAAGGATTCAAACCCCTGCAGTATTGGAACGTGCATGAATTTTTATGGAGATTATTCTTGTAAATGTCCCAAAGGGTACAAAAACGACGACAAGAATCAAAAGAGTTGCATAGAACACAATCCCAGCAATCGATGGAAGATCATTCTCCTGCCTGTTATTTCATTGGGTGTCAGTGCAGGCCTCTTGGTTTTACTAATTGGAATTTCATGGATATATTGGGGAATGCATAGAAGAAAGATCATGAAACTCAAAGAAAAATACTTTAAAGAAAATGGTGGTTTATTGTTACAACAACAACTTGCTATTCAAGGAAGCCCCATGGAGACAACAAAAATCTTTACGGCAGAAGAACTTGAGAAGGCCACAAACAATTACCATGAAAGTCGAGTCCTTGGTGAAGGAGGATATGGAACGGTTTACAAAGGAGTATTACCAGATAACAAAGTGGTTGCCATAAAGAAGTCAAAAATTGGCGTCTCAACTCAGAAGGAGCAGTTTGTTAATGAGATGATTGTTCTTTCTCAAATCAACCATATAAATGTGGTGAGGCTATTGGGTTGCTGTTTAGAGACACCGGTGCCTTTACTAGTTTACGAGTTCATCACCAATGGCACTCTTTTTGAGCACATTCATAATACAAAGGGCAAAGGATCACCGCTTTCATGGCAATTACGATTGAAGATAGCAGCAGAAACTGCAGGAGCACTAGCATACTTACACTTCTCTACTTCCATGCCAATCATACACAGAGATGTGAAAACAACTAACATACTATTAGATGGGAATTACAGAACAAAAGTGTCAGACTTTGGAGCTTCAAAATTGATTCCACTGGATCAAACTCAACTAACAACTTTAGTACAAGGGACACTCGGATACTTAGACCCTGAGTACTTCTGTTCAAGTCAACTAACAGAAAAGAGTGACGTTTACAGCTTTGGAGTTGTCCTTATGGAGCTACTAACAAGCAAAGTGGCACTTTCTTTTGACAGGCCTGAGAAAGAGAGAAACCTAGCGAGCTTCTTTGTTTGGTCAATGGAGGCGGACCTCTTGAATCAAATTCTTGATGATGAAATAGTCAAGGAGGGAAATATTGAGACAATAAAAAACATGGCCGATCTCGCAAGAAGGTGTGTAAAGTTAAAAGGGGAGGATAGGCCTACCATGAAGGAAGTAGCAATGGAGCTAGAGGGAATGAGAATTATGGCAAAGCATCCATGGGGGAAAGCTGATTGTCCAGAGGAGACCGAGGACTTGCTTGGGTCAGCTAAGTCATATCGTGCTAGTGGATATGACAGCATGCAAATCCAGATGTTAATGCCATATGGTAATGGTCGATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
EGF EGF_CA GUB_WAK_bind Pkinase Pkinase_Tyr WAK hEGF

Protein Analysis

749

Amino Acids

82.76

Weight (kDa)

5.73

Isoelectric Point (pI)

35.98

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000066)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G21210 AT1G21230 AT1G21240 AT1G21240 AT1G21245 AT1G21250 AT1G21270 AT1G22720 AT3G25490
fragaria_vesca FvH4_2g35051 FvH4_2g35051 FvH4_2g35060 FvH4_3g10281 FvH4_3g10285 FvH4_3g10286 FvH4_3g10311 FvH4_3g10311 FvH4_3g10320 FvH4_3g10332 FvH4_3g10340 FvH4_3g10350 FvH4_3g10360 FvH4_3g10390 FvH4_3g10412 FvH4_3g10413 FvH4_3g10461 FvH4_3g10462 FvH4_3g10470 FvH4_3g10510 FvH4_3g10520 FvH4_3g10530 FvH4_3g10550 FvH4_3g10560 FvH4_3g10611 FvH4_3g11730 FvH4_6g53140 FvH4_6g53142 FvH4_7g31880 FvH4_7g31910 FvH4_7g31920
malus_domestica MD05G1269900.v1.1 MD05G1270000.v1.1 MD05G1270200.v1.1 MD05G1270400.v1.1 MD05G1270500.v1.1 MD05G1270600.v1.1 MD05G1270800.v1.1 MD05G1270900.v1.1 MD07G1183800.v1.1 MD08G1107600.v1.1 MD10G1248500.v1.1 MD10G1249200.v1.1 MD10G1249500.v1.1 MD10G1250000.v1.1 MD10G1250500.v1.1 MD10G1250900.v1.1 MD10G1251200.v1.1 MD10G1251400.v1.1 MD13G1004600.v1.1 MD15G1088400.v1.1
prunus_persica Prupe.1G442400_v2.0.a1 Prupe.1G442500_v2.0.a1 Prupe.2G223400_v2.0.a1 Prupe.4G091900_v2.0.a1 Prupe.4G093200_v2.0.a1 Prupe.4G093300_v2.0.a1 Prupe.4G093400_v2.0.a1 Prupe.4G093500_v2.0.a1 Prupe.4G094100_v2.0.a1 Prupe.4G094200_v2.0.a1 Prupe.4G094300_v2.0.a1 Prupe.6G358300_v2.0.a1
pyrus_communis pycom08g08990 pycom10g20660 pycom10g20670 pycom10g20680 pycom10g20710 pycom10g20740 pycom13g00400 pycom15g08290
rosa_chinensis RchiOBHm_Chr1g0326861 RchiOBHm_Chr1g0326871 RchiOBHm_Chr1g0331391 RchiOBHm_Chr1g0336911 RchiOBHm_Chr1g0364001 RchiOBHm_Chr2g0174541 RchiOBHm_Chr2g0175041 RchiOBHm_Chr2g0175101 RchiOBHm_Chr2g0175121 RchiOBHm_Chr3g0486331 RchiOBHm_Chr5g0015581 RchiOBHm_Chr5g0016551 RchiOBHm_Chr5g0016561 RchiOBHm_Chr5g0016581 RchiOBHm_Chr5g0016601 RchiOBHm_Chr5g0016611 RchiOBHm_Chr5g0016641 RchiOBHm_Chr5g0016661 RchiOBHm_Chr5g0016691 RchiOBHm_Chr5g0016701 RchiOBHm_Chr5g0016731 RchiOBHm_Chr5g0016741 RchiOBHm_Chr5g0016811 RchiOBHm_Chr5g0016841 RchiOBHm_Chr5g0016871 RchiOBHm_Chr5g0016881 RchiOBHm_Chr5g0016931 RchiOBHm_Chr5g0017021 RchiOBHm_Chr5g0017041 RchiOBHm_Chr5g0017071 RchiOBHm_Chr5g0017091 RchiOBHm_Chr5g0017121 RchiOBHm_Chr5g0017141 RchiOBHm_Chr5g0017291 RchiOBHm_Chr5g0017321 RchiOBHm_Chr5g0017401 RchiOBHm_Chr5g0019001 RchiOBHm_Chr5g0019071 RchiOBHm_Chr5g0028941 RchiOBHm_Chr5g0052141 RchiOBHm_Chr5g0054721 RchiOBHm_Chr5g0054801 RchiOBHm_Chr5g0054931 RchiOBHm_Chr5g0054941 RchiOBHm_Chr6g0259291 RchiOBHm_Chr6g0292991 RchiOBHm_Chr6g0306911
rosa_laevigata RLG00000009465 RLG00000009468 RLG00000010755 RLG00000011976 RLG00000014541 RLG00000014542 RLG00000015169 RLG00000022308 RLG00000027529 RLG00000029324 RLG00000030244 RLG00000030245 RLG00000032210 RLG00000032211 RLG00000032257 RLG00000032259 RLG00000032260 RLG00000032261 RLG00000032262 RLG00000032268 RLG00000032269 RLG00000032272 RLG00000032282 RLG00000032283 RLG00000032308 RLG00000032413 RLG00000033129 RLG00000034945
rosa_multiflora Rmu_co8241929.1_g000001 Rmu_co8269227.1_g000001 Rmu_co8461259.1_g000001 Rmu_co8495385.1_g000001 Rmu_sc0000028.1_g000003 Rmu_sc0000083.1_g000009 Rmu_sc0000083.1_g000010 Rmu_sc0000083.1_g000031 Rmu_sc0000083.1_g000043 Rmu_sc0000083.1_g000046 Rmu_sc0000083.1_g000047 Rmu_sc0000563.1_g000024 Rmu_sc0000842.1_g000012 Rmu_sc0001235.1_g000001 Rmu_sc0001235.1_g000005 Rmu_sc0001235.1_g000009 Rmu_sc0001235.1_g000015 Rmu_sc0001235.1_g000016 Rmu_sc0001235.1_g000017 Rmu_sc0001473.1_g000036 Rmu_sc0001607.1_g000016 Rmu_sc0001788.1_g000006 Rmu_sc0002018.1_g000008 Rmu_sc0002028.1_g000001 Rmu_sc0002680.1_g000011 Rmu_sc0002798.1_g000023 Rmu_sc0002886.1_g000023 Rmu_sc0002989.1_g000012 Rmu_sc0003064.1_g000009 Rmu_sc0003382.1_g000006 Rmu_sc0003630.1_g000002 Rmu_sc0003630.1_g000047 Rmu_sc0003630.1_g000066 Rmu_sc0003630.1_g000067 Rmu_sc0003649.1_g000010 Rmu_sc0003688.1_g000005 Rmu_sc0003920.1_g000007 Rmu_sc0004765.1_g000007 Rmu_sc0004765.1_g000008 Rmu_sc0004920.1_g000011 Rmu_sc0005223.1_g000008 Rmu_sc0005223.1_g000010 Rmu_sc0005223.1_g000015 Rmu_sc0005223.1_g000016 Rmu_sc0005319.1_g000014 Rmu_sc0005319.1_g000015 Rmu_sc0005319.1_g000018 Rmu_sc0005319.1_g000019 Rmu_sc0005319.1_g000025 Rmu_sc0005418.1_g000007 Rmu_sc0005418.1_g000012 Rmu_sc0006106.1_g000011 Rmu_sc0006914.1_g000012 Rmu_sc0007023.1_g000001 Rmu_sc0007662.1_g000001 Rmu_sc0007920.1_g000002 Rmu_sc0007920.1_g000013 Rmu_sc0008053.1_g000016 Rmu_sc0008053.1_g000017 Rmu_sc0008053.1_g000018 Rmu_sc0008053.1_g000023 Rmu_sc0008053.1_g000050 Rmu_sc0009042.1_g000007 Rmu_sc0009042.1_g000008 Rmu_sc0010642.1_g000008 Rmu_sc0011109.1_g000002 Rmu_sc0011314.1_g000006 Rmu_sc0011974.1_g000006 Rmu_sc0012179.1_g000009 Rmu_sc0015169.1_g000001 Rmu_sc0016368.1_g000002 Rmu_sc0022659.1_g000001 Rmu_sc0027371.1_g000001 Rmu_sc0028213.1_g000001 Rmu_sc0034526.1_g000001 Rmu_sc0039366.1_g000002 Rmu_ssc0000050.1_g000084 Rmu_ssc0000050.1_g000088 Rmu_ssc0000167.1_g000017
rosa_roxburghii Rroxscaffold_1G00011340 Rroxscaffold_1G00025710 Rroxscaffold_1G00025870 Rroxscaffold_1G00026070 Rroxscaffold_1G00026170 Rroxscaffold_1G00026200 Rroxscaffold_1G00026270 Rroxscaffold_1G00050950 Rroxscaffold_1G00058900 Rroxscaffold_1G00060040 Rroxscaffold_1G00060060 Rroxscaffold_1G00060070 Rroxscaffold_1G00060080 Rroxscaffold_1G00060110 Rroxscaffold_1G00060120 Rroxscaffold_1G00060140 Rroxscaffold_1G00060170 Rroxscaffold_1G00060210 Rroxscaffold_1G00060220 Rroxscaffold_1G00060240 Rroxscaffold_1G00060250 Rroxscaffold_1G00060260 Rroxscaffold_1G00060300 Rroxscaffold_1G00060320 Rroxscaffold_1G00060330 Rroxscaffold_1G00060900 Rroxscaffold_1G00060920 Rroxscaffold_1G00073980 Rroxscaffold_2G00077560 Rroxscaffold_2G00077580 Rroxscaffold_2G00146990 Rroxscaffold_3G00236200 Rroxscaffold_3G00236210 Rroxscaffold_3G00236220 Rroxscaffold_4G00292760 Rroxscaffold_4G00315200 Rroxscaffold_4G00315240 Rroxscaffold_4G00326240 Rroxscaffold_4G00328980 Rroxscaffold_5G00341890 Rroxscaffold_7G00161350 Rroxscaffold_7G00174490 Rroxscaffold_7G00206550
rosa_rugosa Rorug01G0093000 Rorug01G0093100 Rorug01G0128800 Rorug01G0312000 Rorug01G0312000 Rorug02G0581100 Rorug03G0224600 Rorug05G0028500 Rorug05G0032700 Rorug05G0032800 Rorug05G0032900 Rorug05G0032900 Rorug05G0033000 Rorug05G0033100 Rorug05G0033300 Rorug05G0033400 Rorug05G0033900 Rorug05G0034900 Rorug05G0035000 Rorug05G0046900 Rorug05G0047500 Rorug05G0047500 Rorug05G0111600 Rorug05G0287900 Rorug05G0288700 Rorug05G0586900 Rorug06G0231700 Rorug06G0354300 Rorug06G0354400
rosa_samantha Rh1DG122200 Rh2DG686800 Rh5BG136600 Rh6AG344500 Rh6BG351900 Rh6CG359000 Rh6CG359100 Rh6CG387600 Rh6CG480500 Rh6DG344600 Rh6DG467400
rosa_wichuraiana Rw0G010250 Rw0G014820 Rw0G021400 Rw0G023100 Rw1G009450 Rw1G012100 Rw1G012180 Rw1G028360 Rw2G054260 Rw3G024370 Rw3G024420 Rw3G024470 Rw5G010850 Rw5G011010 Rw5G011020 Rw5G011050 Rw5G011080 Rw5G011120 Rw5G012300 Rw5G018470 Rw5G033830 Rw6G008930 Rw6G030070

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 636
AccB1I GGYRCC 1 cut(s) 1483
AccB7I CCANNNNNTGG 1 cut(s) 226
AciI CCGC 5 cut(s) 201, 231, 863, 1562, 1949
AclWI GGATC 2 cut(s) 1564, 1749
AcoI YGGCCR 1 cut(s) 2019
AcsI RAATTY 4 cut(s) 176, 943, 1107, 1965
AcyI GRCGYC 1 cut(s) 1380
AdeI CACNNNGTG 1 cut(s) 498
AfaI GTAC 6 cut(s) 235, 647, 656, 983, 1767, 1799
AfeI AGCGCT 1 cut(s) 440
AfiI CCNNNNNNNGG 2 cut(s) 12, 226
AgeI ACCGGT 1 cut(s) 1480
AhlI ACTAGT 1 cut(s) 1492
AjnI CCWGG 1 cut(s) 568
Alw21I GWGCWC 3 cut(s) 887, 1533, 1612
Alw26I GTCTC 6 cut(s) 49, 1223, 1387, 1469, 1997, 2144
AlwI GGATC 2 cut(s) 1564, 1749
AlwNI CAGNNNCTG 1 cut(s) 1601
Aor51HI AGCGCT 1 cut(s) 440
AoxI GGCC 8 cut(s) 3, 95, 454, 1084, 1266, 1898, 2019, 2063
ApeKI GCWGC 6 cut(s) 77, 355, 663, 742, 791, 1592
ApoI RAATTY 4 cut(s) 176, 943, 1107, 1965
AsiGI ACCGGT 1 cut(s) 1480
Asp700I GAANNNNTTC 1 cut(s) 586
AspLEI GCGC 1 cut(s) 441
AspS9I GGNCC 3 cut(s) 455, 860, 1951
AsuC2I CCSGG 1 cut(s) 94
AvaII GGWCC 2 cut(s) 860, 1951
BanI GGYRCC 1 cut(s) 1483
Bbv12I GWGCWC 3 cut(s) 887, 1533, 1612
BbvI GCAGC 6 cut(s) 89, 342, 675, 754, 803, 1604
BccI CCATC 8 cut(s) 11, 220, 260, 443, 572, 860, 1032, 1679
BceAI ACGGC 2 cut(s) 315, 1263
BciT130I CCWGG 1 cut(s) 570
BciVI GTATCC 1 cut(s) 1775
BcnI CCSGG 1 cut(s) 94
BcoDI GTCTC 6 cut(s) 49, 1223, 1387, 1469, 1997, 2144
BcuI ACTAGT 1 cut(s) 1492
BfaI CTAG 8 cut(s) 287, 350, 419, 1493, 1613, 1919, 2093, 2190
BfmI CTRYAG 2 cut(s) 922, 1602
BfoI RGCGCY 1 cut(s) 442
BfuI GTATCC 1 cut(s) 1775
BisI GCNGC 6 cut(s) 78, 356, 664, 743, 792, 1593
BlsI GCNGC 6 cut(s) 79, 357, 665, 744, 793, 1594
BmcAI AGTACT 1 cut(s) 1799
Bme1390I CCNGG 2 cut(s) 94, 570
Bme18I GGWCC 2 cut(s) 860, 1951
BmgT120I GGNCC 3 cut(s) 455, 860, 1951
BmiI GGNNCC 1 cut(s) 1485
BmrFI CCNGG 2 cut(s) 94, 570
BmsI GCATC 3 cut(s) 15, 778, 2128
BplI GAGNNNNNCTC 2 cut(s) 323, 355
Bpu10I CCTNAGC 1 cut(s) 442
BpuEI CTTGAG 3 cut(s) 72, 721, 1280
BpuMI CCSGG 1 cut(s) 94
Bsa29I ATCGAT 1 cut(s) 1036
BsaAI YACGTR 1 cut(s) 11
BsaHI GRCGYC 1 cut(s) 1380
BsaI GGTCTC 1 cut(s) 2144
BsaJI CCNNGG 7 cut(s) 297, 568, 641, 1224, 1297, 2123, 2154
BsaWI WCCGGW 1 cut(s) 1480
Bsc4I CCNNNNNNNGG 2 cut(s) 12, 226
Bse118I RCCGGY 3 cut(s) 479, 614, 1480
Bse1I ACTGG 4 cut(s) 63, 227, 880, 1743
Bse3DI GCAATG 1 cut(s) 2091
BseBI CCWGG 1 cut(s) 570
BseCI ATCGAT 1 cut(s) 1036
BseDI CCNNGG 7 cut(s) 297, 568, 641, 1224, 1297, 2123, 2154
BseGI GGATG 6 cut(s) 22, 30, 231, 454, 564, 2119
BseLI CCNNNNNNNGG 2 cut(s) 12, 226
BseMI GCAATG 1 cut(s) 2091
BseMII CTCAG 4 cut(s) 456, 1403, 1785, 1893
BseNI ACTGG 4 cut(s) 63, 227, 880, 1743
BseRI GAGGAG 2 cut(s) 351, 2162
BseXI GCAGC 6 cut(s) 89, 342, 675, 754, 803, 1604
BseYI CCCAGC 1 cut(s) 1028
BsgI GTGCAG 1 cut(s) 1101
BshFI GGCC 8 cut(s) 5, 97, 456, 1086, 1268, 1900, 2021, 2065
BshNI GGYRCC 1 cut(s) 1483
BshTI ACCGGT 1 cut(s) 1480
BshVI ATCGAT 1 cut(s) 1036
BsiHKAI GWGCWC 3 cut(s) 887, 1533, 1612
BsiSI CCGG 4 cut(s) 94, 480, 615, 1481
BslFI GGGAC 3 cut(s) 361, 957, 1786
BslI CCNNNNNNNGG 2 cut(s) 12, 226
BsmAI GTCTC 6 cut(s) 49, 1223, 1387, 1469, 1997, 2144
BsmBI CGTCTC 1 cut(s) 1387
BsmFI GGGAC 3 cut(s) 361, 957, 1786
BsmI GAATGC 1 cut(s) 1134
BsnI GGCC 8 cut(s) 5, 97, 456, 1086, 1268, 1900, 2021, 2065
Bso31I GGTCTC 1 cut(s) 2144
Bsp1286I GDGCHC 3 cut(s) 887, 1533, 1612
Bsp143I GATC 5 cut(s) 1044, 1143, 1556, 1741, 2023
Bsp19I CCATGG 2 cut(s) 1224, 2123
BspACI CCGC 5 cut(s) 201, 231, 863, 1562, 1949
BspANI GGCC 8 cut(s) 5, 97, 456, 1086, 1268, 1900, 2021, 2065
BspCNI CTCAG 4 cut(s) 455, 1402, 1786, 1894
BspDI ATCGAT 1 cut(s) 1036
BspHI TCATGA 1 cut(s) 1146
BspLI GGNNCC 1 cut(s) 1485
BspMAI CTGCAG 2 cut(s) 926, 1606
BspPI GGATC 2 cut(s) 1564, 1749
BspT107I GGYRCC 1 cut(s) 1483
BspTNI GGTCTC 1 cut(s) 2144
BsrDI GCAATG 1 cut(s) 2091
BsrFI RCCGGY 3 cut(s) 479, 614, 1480
BsrI ACTGG 4 cut(s) 63, 227, 880, 1743
BssAI RCCGGY 3 cut(s) 479, 614, 1480
BssECI CCNNGG 7 cut(s) 297, 568, 641, 1224, 1297, 2123, 2154
BssMI GATC 5 cut(s) 1044, 1143, 1556, 1741, 2023
BssNI GRCGYC 1 cut(s) 1380
BssT1I CCWWGG 3 cut(s) 1224, 1297, 2123
Bst2UI CCWGG 1 cut(s) 570
Bst4CI ACNGT 2 cut(s) 403, 1321
BstACI GRCGYC 1 cut(s) 1380
BstAPI GCANNNNNTGC 2 cut(s) 283, 1601
BstBAI YACGTR 1 cut(s) 11
BstC8I GCNNGC 5 cut(s) 481, 867, 1084, 1924, 2207
BstDEI CTNAG 7 cut(s) 442, 651, 1389, 1786, 1794, 1902, 2175
BstDSI CCRYGG 4 cut(s) 297, 641, 1224, 2123
BstEII GGTNACC 1 cut(s) 119
BstF5I GGATG 6 cut(s) 22, 30, 231, 454, 564, 2119
BstH2I RGCGCY 1 cut(s) 442
BstHHI GCGC 1 cut(s) 441
BstKTI GATC 5 cut(s) 1047, 1146, 1559, 1744, 2026
BstMAI GTCTC 6 cut(s) 49, 1223, 1387, 1469, 1997, 2144
BstMBI GATC 5 cut(s) 1044, 1143, 1556, 1741, 2023
BstMWI GCNNNNNNNGC 7 cut(s) 34, 83, 283, 355, 1570, 1601, 2027
BstNI CCWGG 1 cut(s) 570
BstNSI RCATGY 2 cut(s) 376, 2209
BstPI GGTNACC 1 cut(s) 119
BstSCI CCNGG 2 cut(s) 92, 568
BstSFI CTRYAG 2 cut(s) 922, 1602
BstV1I GCAGC 6 cut(s) 89, 342, 675, 754, 803, 1604
Bsu15I ATCGAT 1 cut(s) 1036
BsuI GTATCC 1 cut(s) 1775
BsuRI GGCC 8 cut(s) 5, 97, 456, 1086, 1268, 1900, 2021, 2065
BsuTUI ATCGAT 1 cut(s) 1036
BtgI CCRYGG 4 cut(s) 297, 641, 1224, 2123
BtsCI GGATG 6 cut(s) 22, 30, 231, 454, 564, 2119
BtsIMutI CAGTG 4 cut(s) 220, 887, 1084, 1736
Cac8I GCNNGC 5 cut(s) 481, 867, 1084, 1924, 2207
CaiI CAGNNNCTG 1 cut(s) 1601
CciI TCATGA 1 cut(s) 1146
CfoI GCGC 1 cut(s) 441
Cfr10I RCCGGY 3 cut(s) 479, 614, 1480
Cfr13I GGNCC 3 cut(s) 455, 860, 1951
ClaI ATCGAT 1 cut(s) 1036
CseI GACGC 3 cut(s) 478, 527, 1369
Csp6I GTAC 6 cut(s) 234, 646, 655, 982, 1766, 1798
CspAI ACCGGT 1 cut(s) 1480
CspCI CAANNNNNGTGG 2 cut(s) 1860, 1895
CviQI GTAC 6 cut(s) 234, 646, 655, 982, 1766, 1798
DdeI CTNAG 7 cut(s) 442, 651, 1389, 1786, 1794, 1902, 2175
DpnI GATC 5 cut(s) 1046, 1145, 1558, 1743, 2025
DpnII GATC 5 cut(s) 1044, 1143, 1556, 1741, 2023
DraI TTTAAA 1 cut(s) 1171
DraIII CACNNNGTG 1 cut(s) 498
EaeI YGGCCR 1 cut(s) 2019
EciI GGCGGA 3 cut(s) 190, 852, 1964
Eco130I CCWWGG 3 cut(s) 1224, 1297, 2123
Eco147I AGGCCT 3 cut(s) 1086, 1900, 2065
Eco31I GGTCTC 1 cut(s) 2144
Eco47I GGWCC 2 cut(s) 860, 1951
Eco47III AGCGCT 1 cut(s) 440
Eco91I GGTNACC 1 cut(s) 119
EcoO65I GGTNACC 1 cut(s) 119
EcoRI GAATTC 1 cut(s) 176
EcoRII CCWGG 1 cut(s) 568
EcoT14I CCWWGG 3 cut(s) 1224, 1297, 2123
EcoT22I ATGCAT 1 cut(s) 1134
ErhI CCWWGG 3 cut(s) 1224, 1297, 2123
Esp3I CGTCTC 1 cut(s) 1387
FalI AAGNNNNNCTT 2 cut(s) 1869, 1901
FaqI GGGAC 3 cut(s) 361, 957, 1786
FauNDI CATATG 1 cut(s) 2230
Fnu4HI GCNGC 6 cut(s) 78, 356, 664, 743, 792, 1593
FokI GGATG 6 cut(s) 29, 37, 238, 461, 551, 2106
Fsp4HI GCNGC 6 cut(s) 78, 356, 664, 743, 792, 1593
FspBI CTAG 8 cut(s) 287, 350, 419, 1493, 1613, 1919, 2093, 2190
GlaI GCGC 1 cut(s) 440
GluI GCNGC 6 cut(s) 78, 356, 664, 743, 792, 1593
GsaI CCCAGC 1 cut(s) 1032
HaeII RGCGCY 1 cut(s) 442
HaeIII GGCC 8 cut(s) 5, 97, 456, 1086, 1268, 1900, 2021, 2065
HapII CCGG 4 cut(s) 94, 480, 615, 1481
HgaI GACGC 3 cut(s) 478, 527, 1369
HhaI GCGC 1 cut(s) 441
Hin1I GRCGYC 1 cut(s) 1380
Hin6I GCGC 1 cut(s) 439
HinP1I GCGC 1 cut(s) 439
HincII GTYRAC 1 cut(s) 1814
HindII GTYRAC 1 cut(s) 1814
HindIII AAGCTT 1 cut(s) 558
HinfI GANTC 9 cut(s) 314, 423, 530, 779, 911, 1000, 1293, 1732, 1960
HpaII CCGG 4 cut(s) 94, 480, 615, 1481
Hpy166II GTNNAC 5 cut(s) 575, 1324, 1498, 1814, 1837
Hpy188I TCNGA 6 cut(s) 170, 759, 892, 1392, 1711, 1781
Hpy188III TCNNGA 8 cut(s) 527, 540, 722, 1147, 1957, 1970, 2144, 2215
Hpy8I GTNNAC 5 cut(s) 575, 1324, 1498, 1814, 1837
Hpy99I CGWCG 2 cut(s) 521, 995
HpyAV CCTTC 7 cut(s) 149, 682, 1258, 1298, 1387, 2028, 2068
HpyCH4III ACNGT 2 cut(s) 403, 1321
HpyCH4IV ACGT 4 cut(s) 10, 291, 935, 1833
HpyF10VI GCNNNNNNNGC 7 cut(s) 34, 83, 283, 355, 1570, 1601, 2027
HpyF3I CTNAG 7 cut(s) 442, 651, 1389, 1786, 1794, 1902, 2175
HpySE526I ACGT 4 cut(s) 10, 291, 935, 1833
Hsp92I GRCGYC 1 cut(s) 1380
HspAI GCGC 1 cut(s) 439
KroI GCCGGC 1 cut(s) 479
KroNI GCCGGC 1 cut(s) 481
Kzo9I GATC 5 cut(s) 1044, 1143, 1556, 1741, 2023
LmnI GCTCC 5 cut(s) 1396, 1607, 1718, 1861, 2089
Lsp1109I GCAGC 6 cut(s) 89, 342, 675, 754, 803, 1604
LweI GCATC 3 cut(s) 15, 778, 2128
MaeI CTAG 8 cut(s) 287, 350, 419, 1493, 1613, 1919, 2093, 2190
MaeII ACGT 4 cut(s) 10, 291, 935, 1833
MaeIII GTNAC 6 cut(s) 119, 161, 410, 490, 1191, 1829
MalI GATC 5 cut(s) 1046, 1145, 1558, 1743, 2025
MboI GATC 5 cut(s) 1044, 1143, 1556, 1741, 2023
MboII GAAGA 5 cut(s) 590, 1054, 1149, 1265, 1597
MhlI GDGCHC 3 cut(s) 887, 1533, 1612
MlyI GAGTC 3 cut(s) 524, 788, 1302
MmeI TCCRAC 2 cut(s) 95, 193
Mph1103I ATGCAT 1 cut(s) 1134
MroNI GCCGGC 1 cut(s) 479
MroXI GAANNNNTTC 1 cut(s) 586
MseI TTAA 4 cut(s) 1170, 1407, 2048, 2222
MslI CAYNNNNRTG 2 cut(s) 1443, 1656
MspI CCGG 4 cut(s) 94, 480, 615, 1481
MspR9I CCNGG 2 cut(s) 94, 570
Mva1269I GAATGC 1 cut(s) 1134
MvaI CCWGG 1 cut(s) 570
MwoI GCNNNNNNNGC 7 cut(s) 34, 83, 283, 355, 1570, 1601, 2027
NaeI GCCGGC 1 cut(s) 481
NciI CCSGG 1 cut(s) 94
NcoI CCATGG 2 cut(s) 1224, 2123
NdeI CATATG 1 cut(s) 2230
NdeII GATC 5 cut(s) 1044, 1143, 1556, 1741, 2023
NgoMIV GCCGGC 1 cut(s) 479
NlaIV GGNNCC 1 cut(s) 1485
NmuCI GTSAC 3 cut(s) 410, 490, 1829
NsiI ATGCAT 1 cut(s) 1134
NspI RCATGY 2 cut(s) 376, 2209
PaeI GCATGC 1 cut(s) 2209
PagI TCATGA 1 cut(s) 1146
PceI AGGCCT 3 cut(s) 1086, 1900, 2065
PcsI WCGNNNNNNNCGW 1 cut(s) 267
PctI GAATGC 1 cut(s) 1134
PdiI GCCGGC 1 cut(s) 481
PdmI GAANNNNTTC 1 cut(s) 586
PfeI GAWTC 6 cut(s) 314, 423, 911, 1000, 1732, 1960
PflMI CCANNNNNTGG 1 cut(s) 226
PinAI ACCGGT 1 cut(s) 1480
PkrI GCNGC 6 cut(s) 79, 357, 665, 744, 793, 1594
PleI GAGTC 3 cut(s) 524, 787, 1301
PpsI GAGTC 3 cut(s) 524, 787, 1301
Ppu21I YACGTR 1 cut(s) 11
PsiI TTATAA 1 cut(s) 636
Psp6I CCWGG 1 cut(s) 568
PspEI GGTNACC 1 cut(s) 119
PspFI CCCAGC 1 cut(s) 1028
PspGI CCWGG 1 cut(s) 568
PspN4I GGNNCC 1 cut(s) 1485
PspPI GGNCC 3 cut(s) 455, 860, 1951
PstI CTGCAG 2 cut(s) 926, 1606
PstNI CAGNNNCTG 1 cut(s) 1601
RsaI GTAC 6 cut(s) 235, 647, 656, 983, 1767, 1799
RsaNI GTAC 6 cut(s) 234, 646, 655, 982, 1766, 1798
RseI CAYNNNNRTG 2 cut(s) 1443, 1656
SaqAI TTAA 4 cut(s) 1170, 1407, 2048, 2222
SatI GCNGC 6 cut(s) 78, 356, 664, 743, 792, 1593
Sau3AI GATC 5 cut(s) 1044, 1143, 1556, 1741, 2023
Sau96I GGNCC 3 cut(s) 455, 860, 1951
ScaI AGTACT 1 cut(s) 1799
SchI GAGTC 3 cut(s) 524, 788, 1302
ScrFI CCNGG 2 cut(s) 94, 570
SduI GDGCHC 3 cut(s) 887, 1533, 1612
SfaNI GCATC 3 cut(s) 15, 778, 2128
SfcI CTRYAG 2 cut(s) 922, 1602
SgrAI CRCCGGYG 1 cut(s) 1480
SinI GGWCC 2 cut(s) 860, 1951
SmiMI CAYNNNNRTG 2 cut(s) 1443, 1656
SmlI CTYRAG 3 cut(s) 87, 736, 1259
SmoI CTYRAG 3 cut(s) 87, 736, 1259
SpeI ACTAGT 1 cut(s) 1492
SphI GCATGC 1 cut(s) 2209
SseBI AGGCCT 3 cut(s) 1086, 1900, 2065
SsiI CCGC 5 cut(s) 201, 231, 863, 1562, 1949
SspI AATATT 1 cut(s) 1999
SspMI CTAG 8 cut(s) 287, 350, 419, 1493, 1613, 1919, 2093, 2190
StuI AGGCCT 3 cut(s) 1086, 1900, 2065
StyD4I CCNGG 2 cut(s) 92, 568
StyI CCWWGG 3 cut(s) 1224, 1297, 2123
TaaI ACNGT 2 cut(s) 403, 1321
TaiI ACGT 4 cut(s) 13, 294, 938, 1836
TaqI TCGA 4 cut(s) 622, 1036, 1291, 2242
TaqII GACCGA 1 cut(s) 2168
TatI WGTACW 2 cut(s) 1765, 1797
TfiI GAWTC 6 cut(s) 314, 423, 911, 1000, 1732, 1960
Tru1I TTAA 4 cut(s) 1170, 1407, 2048, 2222
Tru9I TTAA 4 cut(s) 1170, 1407, 2048, 2222
TscAI CASTG 4 cut(s) 227, 887, 1084, 1743
TseFI GTSAC 3 cut(s) 410, 490, 1829
TseI GCWGC 6 cut(s) 77, 355, 663, 742, 791, 1592
Tsp45I GTSAC 3 cut(s) 410, 490, 1829
TspGWI ACGGA 2 cut(s) 630, 859
TspRI CASTG 4 cut(s) 227, 887, 1084, 1743
Van91I CCANNNNNTGG 1 cut(s) 226
VpaK11BI GGWCC 2 cut(s) 860, 1951
XapI RAATTY 4 cut(s) 176, 943, 1107, 1965
XceI RCATGY 2 cut(s) 376, 2209
XcmI CCANNNNNNNNNTGG 1 cut(s) 113
XmnI GAANNNNTTC 1 cut(s) 586
XspI CTAG 8 cut(s) 287, 350, 419, 1493, 1613, 1919, 2093, 2190
ZrmI AGTACT 1 cut(s) 1799
Zsp2I ATGCAT 1 cut(s) 1134
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.