FvH4_3g10311

Wall-associated receptor kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
OG0000066
Physical Location & Seq
Reverse (-)
6021099 .. 6023333
2235 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g10311.t2

Sequence Viewer

Length: 798 bp
ATGCAATTCATATTGGTGGTGGTACTGGTTCTCCTCGCATTTACGGCCGCAGGCAAAGAAGCAGAAGCAGCTGAAGCCCTCCCGCCTCAAGCGCTTCATGGCTGCTCTGACAAGTGCGGTGATCTCACAGTTCCATATCCATTTGGCATGGAGGAGGGTTGTTACCTGGGAGATGAATTCTTTATTTATTGCAACCGTTCGACCCAATCAGCATCTCCATACACTATATCTGATGCCCAAAACAAGTTCTACGCCGTTGGTTGTGACACTATTGCAGCCATGGGCAGCTTCCGAGGGGAAAAAGAAGTCATTACTGGGTGCATTTCAGTATGCAACAGCCTCAGCAGTGTTAATAAGAACTCTTGCTCTGGCATTGGGTGTTGCCAGGTTAACATCCCCAGTGGACTGATCGATCTCACTTTCGAGTTGAGAAGCTTCTACAATCATACGAATGTATCTGAGTTTAACCCCTGCAGCTACGCCTTCATTGCAGAGCAAGACCGGTTCAATTTTAACTCTTCTAGTTTTGAACAACTGAAAGGCATTGAACGGCTTCCAATGGTTCTTAATTGGGCCATTGTGAATGACACAGATCCCTGCGATGAGGCTCAGAACAGGAAGGGTTCCGCATGCAAGGCTAATAGCAAGTGCTTCAACCCAGCTATCAATGAGTCTGTAGGTTACTTGTGCCAGTGCTTGCCTGGTTATGAAGGAAACCCGTACCACCCAGATGGTTGCAAAGGTGAAAAATTATCTTTGATTTACCTATTCAGCTACTATTATATCAATATAAATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
EGF_CA GUB_WAK_bind Pkinase Pkinase_Tyr WAK

Protein Analysis

266

Amino Acids

29.06

Weight (kDa)

4.7

Isoelectric Point (pI)

35.56

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GUB_WAK_bind PF13947 35 - 95 3.3e-10 Wall-associated receptor kinase galacturonan-binding
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000066)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G21210 AT1G21230 AT1G21240 AT1G21240 AT1G21245 AT1G21250 AT1G21270 AT1G22720 AT3G25490
fragaria_vesca FvH4_2g35051 FvH4_2g35051 FvH4_2g35060 FvH4_3g10281 FvH4_3g10285 FvH4_3g10286 FvH4_3g10311 FvH4_3g10311 FvH4_3g10320 FvH4_3g10332 FvH4_3g10340 FvH4_3g10350 FvH4_3g10360 FvH4_3g10390 FvH4_3g10412 FvH4_3g10413 FvH4_3g10461 FvH4_3g10462 FvH4_3g10470 FvH4_3g10510 FvH4_3g10520 FvH4_3g10530 FvH4_3g10550 FvH4_3g10560 FvH4_3g10611 FvH4_3g11730 FvH4_6g53140 FvH4_6g53142 FvH4_7g31880 FvH4_7g31910 FvH4_7g31920
malus_domestica MD05G1269900.v1.1 MD05G1270000.v1.1 MD05G1270200.v1.1 MD05G1270400.v1.1 MD05G1270500.v1.1 MD05G1270600.v1.1 MD05G1270800.v1.1 MD05G1270900.v1.1 MD07G1183800.v1.1 MD08G1107600.v1.1 MD10G1248500.v1.1 MD10G1249200.v1.1 MD10G1249500.v1.1 MD10G1250000.v1.1 MD10G1250500.v1.1 MD10G1250900.v1.1 MD10G1251200.v1.1 MD10G1251400.v1.1 MD13G1004600.v1.1 MD15G1088400.v1.1
prunus_persica Prupe.1G442400_v2.0.a1 Prupe.1G442500_v2.0.a1 Prupe.2G223400_v2.0.a1 Prupe.4G091900_v2.0.a1 Prupe.4G093200_v2.0.a1 Prupe.4G093300_v2.0.a1 Prupe.4G093400_v2.0.a1 Prupe.4G093500_v2.0.a1 Prupe.4G094100_v2.0.a1 Prupe.4G094200_v2.0.a1 Prupe.4G094300_v2.0.a1 Prupe.6G358300_v2.0.a1
pyrus_communis pycom08g08990 pycom10g20660 pycom10g20670 pycom10g20680 pycom10g20710 pycom10g20740 pycom13g00400 pycom15g08290
rosa_chinensis RchiOBHm_Chr1g0326861 RchiOBHm_Chr1g0326871 RchiOBHm_Chr1g0331391 RchiOBHm_Chr1g0336911 RchiOBHm_Chr1g0364001 RchiOBHm_Chr2g0174541 RchiOBHm_Chr2g0175041 RchiOBHm_Chr2g0175101 RchiOBHm_Chr2g0175121 RchiOBHm_Chr3g0486331 RchiOBHm_Chr5g0015581 RchiOBHm_Chr5g0016551 RchiOBHm_Chr5g0016561 RchiOBHm_Chr5g0016581 RchiOBHm_Chr5g0016601 RchiOBHm_Chr5g0016611 RchiOBHm_Chr5g0016641 RchiOBHm_Chr5g0016661 RchiOBHm_Chr5g0016691 RchiOBHm_Chr5g0016701 RchiOBHm_Chr5g0016731 RchiOBHm_Chr5g0016741 RchiOBHm_Chr5g0016811 RchiOBHm_Chr5g0016841 RchiOBHm_Chr5g0016871 RchiOBHm_Chr5g0016881 RchiOBHm_Chr5g0016931 RchiOBHm_Chr5g0017021 RchiOBHm_Chr5g0017041 RchiOBHm_Chr5g0017071 RchiOBHm_Chr5g0017091 RchiOBHm_Chr5g0017121 RchiOBHm_Chr5g0017141 RchiOBHm_Chr5g0017291 RchiOBHm_Chr5g0017321 RchiOBHm_Chr5g0017401 RchiOBHm_Chr5g0019001 RchiOBHm_Chr5g0019071 RchiOBHm_Chr5g0028941 RchiOBHm_Chr5g0052141 RchiOBHm_Chr5g0054721 RchiOBHm_Chr5g0054801 RchiOBHm_Chr5g0054931 RchiOBHm_Chr5g0054941 RchiOBHm_Chr6g0259291 RchiOBHm_Chr6g0292991 RchiOBHm_Chr6g0306911
rosa_laevigata RLG00000009465 RLG00000009468 RLG00000010755 RLG00000011976 RLG00000014541 RLG00000014542 RLG00000015169 RLG00000022308 RLG00000027529 RLG00000029324 RLG00000030244 RLG00000030245 RLG00000032210 RLG00000032211 RLG00000032257 RLG00000032259 RLG00000032260 RLG00000032261 RLG00000032262 RLG00000032268 RLG00000032269 RLG00000032272 RLG00000032282 RLG00000032283 RLG00000032308 RLG00000032413 RLG00000033129 RLG00000034945
rosa_multiflora Rmu_co8241929.1_g000001 Rmu_co8269227.1_g000001 Rmu_co8461259.1_g000001 Rmu_co8495385.1_g000001 Rmu_sc0000028.1_g000003 Rmu_sc0000083.1_g000009 Rmu_sc0000083.1_g000010 Rmu_sc0000083.1_g000031 Rmu_sc0000083.1_g000043 Rmu_sc0000083.1_g000046 Rmu_sc0000083.1_g000047 Rmu_sc0000563.1_g000024 Rmu_sc0000842.1_g000012 Rmu_sc0001235.1_g000001 Rmu_sc0001235.1_g000005 Rmu_sc0001235.1_g000009 Rmu_sc0001235.1_g000015 Rmu_sc0001235.1_g000016 Rmu_sc0001235.1_g000017 Rmu_sc0001473.1_g000036 Rmu_sc0001607.1_g000016 Rmu_sc0001788.1_g000006 Rmu_sc0002018.1_g000008 Rmu_sc0002028.1_g000001 Rmu_sc0002680.1_g000011 Rmu_sc0002798.1_g000023 Rmu_sc0002886.1_g000023 Rmu_sc0002989.1_g000012 Rmu_sc0003064.1_g000009 Rmu_sc0003382.1_g000006 Rmu_sc0003630.1_g000002 Rmu_sc0003630.1_g000047 Rmu_sc0003630.1_g000066 Rmu_sc0003630.1_g000067 Rmu_sc0003649.1_g000010 Rmu_sc0003688.1_g000005 Rmu_sc0003920.1_g000007 Rmu_sc0004765.1_g000007 Rmu_sc0004765.1_g000008 Rmu_sc0004920.1_g000011 Rmu_sc0005223.1_g000008 Rmu_sc0005223.1_g000010 Rmu_sc0005223.1_g000015 Rmu_sc0005223.1_g000016 Rmu_sc0005319.1_g000014 Rmu_sc0005319.1_g000015 Rmu_sc0005319.1_g000018 Rmu_sc0005319.1_g000019 Rmu_sc0005319.1_g000025 Rmu_sc0005418.1_g000007 Rmu_sc0005418.1_g000012 Rmu_sc0006106.1_g000011 Rmu_sc0006914.1_g000012 Rmu_sc0007023.1_g000001 Rmu_sc0007662.1_g000001 Rmu_sc0007920.1_g000002 Rmu_sc0007920.1_g000013 Rmu_sc0008053.1_g000016 Rmu_sc0008053.1_g000017 Rmu_sc0008053.1_g000018 Rmu_sc0008053.1_g000023 Rmu_sc0008053.1_g000050 Rmu_sc0009042.1_g000007 Rmu_sc0009042.1_g000008 Rmu_sc0010642.1_g000008 Rmu_sc0011109.1_g000002 Rmu_sc0011314.1_g000006 Rmu_sc0011974.1_g000006 Rmu_sc0012179.1_g000009 Rmu_sc0015169.1_g000001 Rmu_sc0016368.1_g000002 Rmu_sc0022659.1_g000001 Rmu_sc0027371.1_g000001 Rmu_sc0028213.1_g000001 Rmu_sc0034526.1_g000001 Rmu_sc0039366.1_g000002 Rmu_ssc0000050.1_g000084 Rmu_ssc0000050.1_g000088 Rmu_ssc0000167.1_g000017
rosa_roxburghii Rroxscaffold_1G00011340 Rroxscaffold_1G00025710 Rroxscaffold_1G00025870 Rroxscaffold_1G00026070 Rroxscaffold_1G00026170 Rroxscaffold_1G00026200 Rroxscaffold_1G00026270 Rroxscaffold_1G00050950 Rroxscaffold_1G00058900 Rroxscaffold_1G00060040 Rroxscaffold_1G00060060 Rroxscaffold_1G00060070 Rroxscaffold_1G00060080 Rroxscaffold_1G00060110 Rroxscaffold_1G00060120 Rroxscaffold_1G00060140 Rroxscaffold_1G00060170 Rroxscaffold_1G00060210 Rroxscaffold_1G00060220 Rroxscaffold_1G00060240 Rroxscaffold_1G00060250 Rroxscaffold_1G00060260 Rroxscaffold_1G00060300 Rroxscaffold_1G00060320 Rroxscaffold_1G00060330 Rroxscaffold_1G00060900 Rroxscaffold_1G00060920 Rroxscaffold_1G00073980 Rroxscaffold_2G00077560 Rroxscaffold_2G00077580 Rroxscaffold_2G00146990 Rroxscaffold_3G00236200 Rroxscaffold_3G00236210 Rroxscaffold_3G00236220 Rroxscaffold_4G00292760 Rroxscaffold_4G00315200 Rroxscaffold_4G00315240 Rroxscaffold_4G00326240 Rroxscaffold_4G00328980 Rroxscaffold_5G00341890 Rroxscaffold_7G00161350 Rroxscaffold_7G00174490 Rroxscaffold_7G00206550
rosa_rugosa Rorug01G0093000 Rorug01G0093100 Rorug01G0128800 Rorug01G0312000 Rorug01G0312000 Rorug02G0581100 Rorug03G0224600 Rorug05G0028500 Rorug05G0032700 Rorug05G0032800 Rorug05G0032900 Rorug05G0032900 Rorug05G0033000 Rorug05G0033100 Rorug05G0033300 Rorug05G0033400 Rorug05G0033900 Rorug05G0034900 Rorug05G0035000 Rorug05G0046900 Rorug05G0047500 Rorug05G0047500 Rorug05G0111600 Rorug05G0287900 Rorug05G0288700 Rorug05G0586900 Rorug06G0231700 Rorug06G0354300 Rorug06G0354400
rosa_samantha Rh1DG122200 Rh2DG686800 Rh5BG136600 Rh6AG344500 Rh6BG351900 Rh6CG359000 Rh6CG359100 Rh6CG387600 Rh6CG480500 Rh6DG344600 Rh6DG467400
rosa_wichuraiana Rw0G010250 Rw0G014820 Rw0G021400 Rw0G023100 Rw1G009450 Rw1G012100 Rw1G012180 Rw1G028360 Rw2G054260 Rw3G024370 Rw3G024420 Rw3G024470 Rw5G010850 Rw5G011010 Rw5G011020 Rw5G011050 Rw5G011080 Rw5G011120 Rw5G012300 Rw5G018470 Rw5G033830 Rw6G008930 Rw6G030070

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 4 cut(s) 48, 83, 117, 627
AclWI GGATC 1 cut(s) 587
AcoI YGGCCR 1 cut(s) 45
AcsI RAATTY 1 cut(s) 176
AcuI CTGAAG 1 cut(s) 93
AfaI GTAC 2 cut(s) 24, 722
AfeI AGCGCT 1 cut(s) 93
AgeI ACCGGT 1 cut(s) 501
AgsI TTSAA 4 cut(s) 508, 530, 548, 655
AjnI CCWGG 3 cut(s) 165, 384, 700
AluBI AGCT 6 cut(s) 71, 288, 435, 477, 662, 774
AluI AGCT 6 cut(s) 71, 288, 435, 477, 662, 774
AlwI GGATC 1 cut(s) 587
Aor51HI AGCGCT 1 cut(s) 93
AoxI GGCC 2 cut(s) 45, 573
ApeKI GCWGC 5 cut(s) 68, 102, 275, 285, 474
ApoI RAATTY 1 cut(s) 176
AsiGI ACCGGT 1 cut(s) 501
Asp700I GAANNNNTTC 1 cut(s) 552
AspLEI GCGC 1 cut(s) 94
AspS9I GGNCC 1 cut(s) 573
AsuHPI GGTGA 2 cut(s) 131, 755
BaeI ACNNNNGTAYC 2 cut(s) 438, 471
BbvCI CCTCAGC 1 cut(s) 341
BbvI GCAGC 5 cut(s) 80, 89, 287, 297, 486
BccI CCATC 1 cut(s) 725
BceAI ACGGC 3 cut(s) 60, 239, 566
BciT130I CCWGG 3 cut(s) 167, 386, 702
BfaI CTAG 1 cut(s) 522
BfmI CTRYAG 2 cut(s) 472, 675
BfoI RGCGCY 1 cut(s) 95
BisI GCNGC 6 cut(s) 48, 69, 103, 276, 286, 475
BlsI GCNGC 6 cut(s) 49, 70, 104, 277, 287, 476
Bme1390I CCNGG 3 cut(s) 167, 386, 702
BmgT120I GGNCC 1 cut(s) 573
BmiI GGNNCC 1 cut(s) 625
BmrFI CCNGG 3 cut(s) 167, 386, 702
BmrI ACTGGG 2 cut(s) 324, 393
BmsI GCATC 2 cut(s) 221, 223
BmuI ACTGGG 2 cut(s) 324, 393
Bpu10I CCTNAGC 1 cut(s) 341
BpuEI CTTGAG 1 cut(s) 72
Bsa29I ATCGAT 1 cut(s) 411
BsaJI CCNNGG 3 cut(s) 166, 279, 292
BsaWI WCCGGW 1 cut(s) 501
BsaXI ACNNNNNCTCC 2 cut(s) 15, 45
Bse118I RCCGGY 1 cut(s) 501
Bse1I ACTGG 4 cut(s) 30, 319, 399, 691
Bse3DI GCAATG 1 cut(s) 486
BseBI CCWGG 3 cut(s) 167, 386, 702
BseCI ATCGAT 1 cut(s) 411
BseDI CCNNGG 3 cut(s) 166, 279, 292
BseGI GGATG 1 cut(s) 393
BseMI GCAATG 1 cut(s) 486
BseMII CTCAG 3 cut(s) 355, 450, 623
BseNI ACTGG 4 cut(s) 30, 319, 399, 691
BseRI GAGGAG 2 cut(s) 23, 167
BseX3I CGGCCG 1 cut(s) 45
BseXI GCAGC 5 cut(s) 80, 89, 287, 297, 486
BseYI CCCAGC 1 cut(s) 658
Bsh1285I CGRYCG 1 cut(s) 48
BshFI GGCC 2 cut(s) 47, 575
BshTI ACCGGT 1 cut(s) 501
BshVI ATCGAT 1 cut(s) 411
BsiEI CGRYCG 1 cut(s) 48
BsiSI CCGG 1 cut(s) 502
BsnI GGCC 2 cut(s) 47, 575
Bsp143I GATC 4 cut(s) 121, 408, 412, 592
Bsp19I CCATGG 1 cut(s) 279
BspACI CCGC 4 cut(s) 48, 83, 117, 627
BspANI GGCC 2 cut(s) 47, 575
BspCNI CTCAG 3 cut(s) 354, 451, 622
BspDI ATCGAT 1 cut(s) 411
BspLI GGNNCC 1 cut(s) 625
BspMAI CTGCAG 1 cut(s) 476
BspPI GGATC 1 cut(s) 587
BsrDI GCAATG 1 cut(s) 486
BsrFI RCCGGY 1 cut(s) 501
BsrI ACTGG 4 cut(s) 30, 319, 399, 691
BssAI RCCGGY 1 cut(s) 501
BssECI CCNNGG 3 cut(s) 166, 279, 292
BssMI GATC 4 cut(s) 121, 408, 412, 592
BssT1I CCWWGG 1 cut(s) 279
Bst2UI CCWGG 3 cut(s) 167, 386, 702
Bst4CI ACNGT 2 cut(s) 130, 197
Bst6I CTCTTC 1 cut(s) 523
BstC8I GCNNGC 3 cut(s) 52, 631, 698
BstDEI CTNAG 3 cut(s) 341, 459, 609
BstDSI CCRYGG 1 cut(s) 279
BstF5I GGATG 1 cut(s) 393
BstH2I RGCGCY 1 cut(s) 95
BstHHI GCGC 1 cut(s) 94
BstKTI GATC 4 cut(s) 124, 411, 415, 595
BstMBI GATC 4 cut(s) 121, 408, 412, 592
BstMCI CGRYCG 1 cut(s) 48
BstMWI GCNNNNNNNGC 6 cut(s) 44, 68, 74, 91, 488, 635
BstNI CCWGG 3 cut(s) 167, 386, 702
BstNSI RCATGY 1 cut(s) 633
BstSCI CCNGG 3 cut(s) 165, 384, 700
BstSFI CTRYAG 2 cut(s) 472, 675
BstV1I GCAGC 5 cut(s) 80, 89, 287, 297, 486
BstX2I RGATCY 1 cut(s) 592
BstXI CCANNNNNNTGG 1 cut(s) 731
BstYI RGATCY 1 cut(s) 592
BstZI CGGCCG 1 cut(s) 45
Bsu15I ATCGAT 1 cut(s) 411
BsuRI GGCC 2 cut(s) 47, 575
BsuTUI ATCGAT 1 cut(s) 411
BtgI CCRYGG 1 cut(s) 279
BtgZI GCGATG 1 cut(s) 615
BtsCI GGATG 1 cut(s) 393
BtsI GCAGTG 1 cut(s) 352
BtsIMutI CAGTG 3 cut(s) 352, 406, 698
Cac8I GCNNGC 3 cut(s) 52, 631, 698
CfoI GCGC 1 cut(s) 94
Cfr10I RCCGGY 1 cut(s) 501
Cfr13I GGNCC 1 cut(s) 573
ClaI ATCGAT 1 cut(s) 411
Csp6I GTAC 2 cut(s) 23, 721
CspAI ACCGGT 1 cut(s) 501
CviAII CATG 4 cut(s) 98, 148, 280, 630
CviQI GTAC 2 cut(s) 23, 721
DdeI CTNAG 3 cut(s) 341, 459, 609
DpnI GATC 4 cut(s) 123, 410, 414, 594
DpnII GATC 4 cut(s) 121, 408, 412, 592
EaeI YGGCCR 1 cut(s) 45
EagI CGGCCG 1 cut(s) 45
Eam1104I CTCTTC 1 cut(s) 523
EarI CTCTTC 1 cut(s) 523
EclXI CGGCCG 1 cut(s) 45
Eco130I CCWWGG 1 cut(s) 279
Eco47III AGCGCT 1 cut(s) 93
Eco52I CGGCCG 1 cut(s) 45
Eco57I CTGAAG 1 cut(s) 93
EcoRI GAATTC 1 cut(s) 176
EcoRII CCWGG 3 cut(s) 165, 384, 700
EcoT14I CCWWGG 1 cut(s) 279
ErhI CCWWGG 1 cut(s) 279
FaeI CATG 4 cut(s) 101, 151, 283, 633
FatI CATG 4 cut(s) 97, 147, 279, 629
FauI CCCGC 1 cut(s) 90
Fnu4HI GCNGC 6 cut(s) 48, 69, 103, 276, 286, 475
FokI GGATG 1 cut(s) 380
Fsp4HI GCNGC 6 cut(s) 48, 69, 103, 276, 286, 475
FspBI CTAG 1 cut(s) 522
GlaI GCGC 1 cut(s) 93
GluI GCNGC 6 cut(s) 48, 69, 103, 276, 286, 475
GsaI CCCAGC 1 cut(s) 662
HaeII RGCGCY 1 cut(s) 95
HaeIII GGCC 2 cut(s) 47, 575
HapII CCGG 1 cut(s) 502
HhaI GCGC 1 cut(s) 94
Hin1II CATG 4 cut(s) 101, 151, 283, 633
Hin6I GCGC 1 cut(s) 92
HinP1I GCGC 1 cut(s) 92
HincII GTYRAC 1 cut(s) 391
HindII GTYRAC 1 cut(s) 391
HindIII AAGCTT 1 cut(s) 433
HinfI GANTC 1 cut(s) 671
HpaI GTTAAC 1 cut(s) 391
HpaII CCGG 1 cut(s) 502
HphI GGTGA 2 cut(s) 131, 755
Hpy166II GTNNAC 2 cut(s) 391, 404
Hpy188I TCNGA 5 cut(s) 109, 232, 293, 460, 612
Hpy8I GTNNAC 2 cut(s) 391, 404
HpyAV CCTTC 3 cut(s) 493, 613, 704
HpyCH4III ACNGT 2 cut(s) 130, 197
HpyCH4V TGCA 9 cut(s) 4, 192, 275, 321, 333, 474, 491, 633, 738
HpyF10VI GCNNNNNNNGC 6 cut(s) 44, 68, 74, 91, 488, 635
HpyF3I CTNAG 3 cut(s) 341, 459, 609
Hsp92II CATG 4 cut(s) 101, 151, 283, 633
HspAI GCGC 1 cut(s) 92
KspAI GTTAAC 1 cut(s) 391
Kzo9I GATC 4 cut(s) 121, 408, 412, 592
Lsp1109I GCAGC 5 cut(s) 80, 89, 287, 297, 486
LweI GCATC 2 cut(s) 221, 223
MaeI CTAG 1 cut(s) 522
MaeIII GTNAC 3 cut(s) 161, 263, 680
MalI GATC 4 cut(s) 123, 410, 414, 594
MboI GATC 4 cut(s) 121, 408, 412, 592
MboII GAAGA 1 cut(s) 510
MflI RGATCY 1 cut(s) 592
MluCI AATT 6 cut(s) 5, 176, 508, 568, 749, 793
MlyI GAGTC 1 cut(s) 680
MnlI CCTC 8 cut(s) 44, 89, 96, 145, 148, 287, 350, 598
MroXI GAANNNNTTC 1 cut(s) 552
MseI TTAA 6 cut(s) 351, 390, 465, 513, 567, 796
MslI CAYNNNNRTG 3 cut(s) 14, 450, 729
MspA1I CMGCKG 1 cut(s) 71
MspI CCGG 1 cut(s) 502
MspR9I CCNGG 3 cut(s) 167, 386, 702
MvaI CCWGG 3 cut(s) 167, 386, 702
MwoI GCNNNNNNNGC 6 cut(s) 44, 68, 74, 91, 488, 635
NcoI CCATGG 1 cut(s) 279
NdeII GATC 4 cut(s) 121, 408, 412, 592
NlaIII CATG 4 cut(s) 101, 151, 283, 633
NlaIV GGNNCC 1 cut(s) 625
NmuCI GTSAC 1 cut(s) 263
NspI RCATGY 1 cut(s) 633
PaeI GCATGC 1 cut(s) 633
PdmI GAANNNNTTC 1 cut(s) 552
PinAI ACCGGT 1 cut(s) 501
PkrI GCNGC 6 cut(s) 49, 70, 104, 277, 287, 476
PleI GAGTC 1 cut(s) 679
PpsI GAGTC 1 cut(s) 679
Psp6I CCWGG 3 cut(s) 165, 384, 700
PspFI CCCAGC 1 cut(s) 658
PspGI CCWGG 3 cut(s) 165, 384, 700
PspN4I GGNNCC 1 cut(s) 625
PspPI GGNCC 1 cut(s) 573
PstI CTGCAG 1 cut(s) 476
PsuI RGATCY 1 cut(s) 592
PvuII CAGCTG 1 cut(s) 71
RsaI GTAC 2 cut(s) 24, 722
RsaNI GTAC 2 cut(s) 23, 721
RseI CAYNNNNRTG 3 cut(s) 14, 450, 729
SaqAI TTAA 6 cut(s) 351, 390, 465, 513, 567, 796
SatI GCNGC 6 cut(s) 48, 69, 103, 276, 286, 475
Sau3AI GATC 4 cut(s) 121, 408, 412, 592
Sau96I GGNCC 1 cut(s) 573
SchI GAGTC 1 cut(s) 680
ScrFI CCNGG 3 cut(s) 167, 386, 702
SfaNI GCATC 2 cut(s) 221, 223
SfcI CTRYAG 2 cut(s) 472, 675
SmiMI CAYNNNNRTG 3 cut(s) 14, 450, 729
SmlI CTYRAG 1 cut(s) 87
SmoI CTYRAG 1 cut(s) 87
SphI GCATGC 1 cut(s) 633
Sse9I AATT 6 cut(s) 5, 176, 508, 568, 749, 793
SsiI CCGC 4 cut(s) 48, 83, 117, 627
SspMI CTAG 1 cut(s) 522
StyD4I CCNGG 3 cut(s) 165, 384, 700
StyI CCWWGG 1 cut(s) 279
TaaI ACNGT 2 cut(s) 130, 197
TaqI TCGA 3 cut(s) 200, 411, 423
TasI AATT 6 cut(s) 5, 176, 508, 568, 749, 793
TauI GCSGC 1 cut(s) 50
Tru1I TTAA 6 cut(s) 351, 390, 465, 513, 567, 796
Tru9I TTAA 6 cut(s) 351, 390, 465, 513, 567, 796
TscAI CASTG 3 cut(s) 352, 406, 698
TseFI GTSAC 1 cut(s) 263
TseI GCWGC 5 cut(s) 68, 102, 275, 285, 474
Tsp45I GTSAC 1 cut(s) 263
TspDTI ATGAA 4 cut(s) 86, 189, 475, 723
TspRI CASTG 3 cut(s) 352, 406, 698
XapI RAATTY 1 cut(s) 176
XceI RCATGY 1 cut(s) 633
XcmI CCANNNNNNNNNTGG 1 cut(s) 698
XmnI GAANNNNTTC 1 cut(s) 552
XspI CTAG 1 cut(s) 522
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.