Rroxscaffold_1G00011340

Wall-associated receptor kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
OG0000066
Physical Location & Seq
Forward (+)
14313752 .. 14315150
1399 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00011340.1

Sequence Viewer

Length: 1095 bp
ATGGCTTTGCGACTCTCATTGGTGGCAGTCCTACTCCTGTTATCGGCGGCTTGTACTACTACGACAATAGCAGCTCCAGCTCAAGCCCTGCCTGACTGCTCAGACAAGTGCGCATGCGGCAATCTCACAATTCCGTATCCATTTGGCATGGAGAAGGCTTGTTACCTGCGAGAAGAATTCTTTATCAATTGTAACCATACTACCCAACCACCAACAGCATACTTGGGGAAAAGCAACATAAGTGTTACTAACATTTCTCTTGATGACGGTGAGTTGCGAATATTAAACTTCATAGCTCCAGATTGCTATGACGCCCATGGCATTAATATGACGTCTAGATTGTCTTCTCAGCTCACATTGCCTCTTCCTTATACGATCTCTAATACTAAAAACAGATTCATTGCCGTTGGTTGTGACACTTATGCAATTTTACAAGGCTTCCGAGGGAAAGAAAAGTTCATTACCGGGTGCATGACCGTATGCGACAGCCTCGACAACGTCCATAAGAACTCTTGCTCCGGCTCGGGGTGTTGCCAGACTGACATCCCCACTGGAATGCACAATGCTACTATGAATTTGGATAGCTACTTCAATCATTCGAGTGTGTGGGATTTTAACCCCTGCAGCTACGCCTTCATTGCAGAGCAGGGGCAGTTCAGTTTCTCCCGTACCATTTTTGAACAAATGAATAGCACTAAACGGCTGCCAATGGTTCTTAATTGGGCCATTGGGAATGACACAGACCCCTGTGATGAAGCTCAAAAGAGGAAGGATTTCGTTTGCAAGGCTAAGAGCAGATGCGTCAACAGGCCTAACAAAGGGTCTATAGGTTACTTGTGCCAGTGCTTGCCTGGTTACGAAGGAAACCCCTATCATCCAGATGGTTGCCAAGATATCAATGAGTGCAGTGCTTCAAACCCTTGTCAGTTTGGAGAGTGCTTAAATTCACCTCCAGGAAGTTACTCTTGTTTATGTCGCAAAGGTTACAAAAACGACCACATGAATGACAAGATTTGCATAAAAGACGATTCCAAAAAGATCGTACTCCTGCGTATTGTTTCATTGGGTATGTATACTTTCATATTATCTGCCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
EGF_CA GUB_WAK_bind Pkinase Pkinase_Tyr WAK

Protein Analysis

364

Amino Acids

40.12

Weight (kDa)

6.63

Isoelectric Point (pI)

40.18

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GUB_WAK_bind PF13947 33 - 95 1.9e-10 Wall-associated receptor kinase galacturonan-binding
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000066)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G21210 AT1G21230 AT1G21240 AT1G21240 AT1G21245 AT1G21250 AT1G21270 AT1G22720 AT3G25490
fragaria_vesca FvH4_2g35051 FvH4_2g35051 FvH4_2g35060 FvH4_3g10281 FvH4_3g10285 FvH4_3g10286 FvH4_3g10311 FvH4_3g10311 FvH4_3g10320 FvH4_3g10332 FvH4_3g10340 FvH4_3g10350 FvH4_3g10360 FvH4_3g10390 FvH4_3g10412 FvH4_3g10413 FvH4_3g10461 FvH4_3g10462 FvH4_3g10470 FvH4_3g10510 FvH4_3g10520 FvH4_3g10530 FvH4_3g10550 FvH4_3g10560 FvH4_3g10611 FvH4_3g11730 FvH4_6g53140 FvH4_6g53142 FvH4_7g31880 FvH4_7g31910 FvH4_7g31920
malus_domestica MD05G1269900.v1.1 MD05G1270000.v1.1 MD05G1270200.v1.1 MD05G1270400.v1.1 MD05G1270500.v1.1 MD05G1270600.v1.1 MD05G1270800.v1.1 MD05G1270900.v1.1 MD07G1183800.v1.1 MD08G1107600.v1.1 MD10G1248500.v1.1 MD10G1249200.v1.1 MD10G1249500.v1.1 MD10G1250000.v1.1 MD10G1250500.v1.1 MD10G1250900.v1.1 MD10G1251200.v1.1 MD10G1251400.v1.1 MD13G1004600.v1.1 MD15G1088400.v1.1
prunus_persica Prupe.1G442400_v2.0.a1 Prupe.1G442500_v2.0.a1 Prupe.2G223400_v2.0.a1 Prupe.4G091900_v2.0.a1 Prupe.4G093200_v2.0.a1 Prupe.4G093300_v2.0.a1 Prupe.4G093400_v2.0.a1 Prupe.4G093500_v2.0.a1 Prupe.4G094100_v2.0.a1 Prupe.4G094200_v2.0.a1 Prupe.4G094300_v2.0.a1 Prupe.6G358300_v2.0.a1
pyrus_communis pycom08g08990 pycom10g20660 pycom10g20670 pycom10g20680 pycom10g20710 pycom10g20740 pycom13g00400 pycom15g08290
rosa_chinensis RchiOBHm_Chr1g0326861 RchiOBHm_Chr1g0326871 RchiOBHm_Chr1g0331391 RchiOBHm_Chr1g0336911 RchiOBHm_Chr1g0364001 RchiOBHm_Chr2g0174541 RchiOBHm_Chr2g0175041 RchiOBHm_Chr2g0175101 RchiOBHm_Chr2g0175121 RchiOBHm_Chr3g0486331 RchiOBHm_Chr5g0015581 RchiOBHm_Chr5g0016551 RchiOBHm_Chr5g0016561 RchiOBHm_Chr5g0016581 RchiOBHm_Chr5g0016601 RchiOBHm_Chr5g0016611 RchiOBHm_Chr5g0016641 RchiOBHm_Chr5g0016661 RchiOBHm_Chr5g0016691 RchiOBHm_Chr5g0016701 RchiOBHm_Chr5g0016731 RchiOBHm_Chr5g0016741 RchiOBHm_Chr5g0016811 RchiOBHm_Chr5g0016841 RchiOBHm_Chr5g0016871 RchiOBHm_Chr5g0016881 RchiOBHm_Chr5g0016931 RchiOBHm_Chr5g0017021 RchiOBHm_Chr5g0017041 RchiOBHm_Chr5g0017071 RchiOBHm_Chr5g0017091 RchiOBHm_Chr5g0017121 RchiOBHm_Chr5g0017141 RchiOBHm_Chr5g0017291 RchiOBHm_Chr5g0017321 RchiOBHm_Chr5g0017401 RchiOBHm_Chr5g0019001 RchiOBHm_Chr5g0019071 RchiOBHm_Chr5g0028941 RchiOBHm_Chr5g0052141 RchiOBHm_Chr5g0054721 RchiOBHm_Chr5g0054801 RchiOBHm_Chr5g0054931 RchiOBHm_Chr5g0054941 RchiOBHm_Chr6g0259291 RchiOBHm_Chr6g0292991 RchiOBHm_Chr6g0306911
rosa_laevigata RLG00000009465 RLG00000009468 RLG00000010755 RLG00000011976 RLG00000014541 RLG00000014542 RLG00000015169 RLG00000022308 RLG00000027529 RLG00000029324 RLG00000030244 RLG00000030245 RLG00000032210 RLG00000032211 RLG00000032257 RLG00000032259 RLG00000032260 RLG00000032261 RLG00000032262 RLG00000032268 RLG00000032269 RLG00000032272 RLG00000032282 RLG00000032283 RLG00000032308 RLG00000032413 RLG00000033129 RLG00000034945
rosa_multiflora Rmu_co8241929.1_g000001 Rmu_co8269227.1_g000001 Rmu_co8461259.1_g000001 Rmu_co8495385.1_g000001 Rmu_sc0000028.1_g000003 Rmu_sc0000083.1_g000009 Rmu_sc0000083.1_g000010 Rmu_sc0000083.1_g000031 Rmu_sc0000083.1_g000043 Rmu_sc0000083.1_g000046 Rmu_sc0000083.1_g000047 Rmu_sc0000563.1_g000024 Rmu_sc0000842.1_g000012 Rmu_sc0001235.1_g000001 Rmu_sc0001235.1_g000005 Rmu_sc0001235.1_g000009 Rmu_sc0001235.1_g000015 Rmu_sc0001235.1_g000016 Rmu_sc0001235.1_g000017 Rmu_sc0001473.1_g000036 Rmu_sc0001607.1_g000016 Rmu_sc0001788.1_g000006 Rmu_sc0002018.1_g000008 Rmu_sc0002028.1_g000001 Rmu_sc0002680.1_g000011 Rmu_sc0002798.1_g000023 Rmu_sc0002886.1_g000023 Rmu_sc0002989.1_g000012 Rmu_sc0003064.1_g000009 Rmu_sc0003382.1_g000006 Rmu_sc0003630.1_g000002 Rmu_sc0003630.1_g000047 Rmu_sc0003630.1_g000066 Rmu_sc0003630.1_g000067 Rmu_sc0003649.1_g000010 Rmu_sc0003688.1_g000005 Rmu_sc0003920.1_g000007 Rmu_sc0004765.1_g000007 Rmu_sc0004765.1_g000008 Rmu_sc0004920.1_g000011 Rmu_sc0005223.1_g000008 Rmu_sc0005223.1_g000010 Rmu_sc0005223.1_g000015 Rmu_sc0005223.1_g000016 Rmu_sc0005319.1_g000014 Rmu_sc0005319.1_g000015 Rmu_sc0005319.1_g000018 Rmu_sc0005319.1_g000019 Rmu_sc0005319.1_g000025 Rmu_sc0005418.1_g000007 Rmu_sc0005418.1_g000012 Rmu_sc0006106.1_g000011 Rmu_sc0006914.1_g000012 Rmu_sc0007023.1_g000001 Rmu_sc0007662.1_g000001 Rmu_sc0007920.1_g000002 Rmu_sc0007920.1_g000013 Rmu_sc0008053.1_g000016 Rmu_sc0008053.1_g000017 Rmu_sc0008053.1_g000018 Rmu_sc0008053.1_g000023 Rmu_sc0008053.1_g000050 Rmu_sc0009042.1_g000007 Rmu_sc0009042.1_g000008 Rmu_sc0010642.1_g000008 Rmu_sc0011109.1_g000002 Rmu_sc0011314.1_g000006 Rmu_sc0011974.1_g000006 Rmu_sc0012179.1_g000009 Rmu_sc0015169.1_g000001 Rmu_sc0016368.1_g000002 Rmu_sc0022659.1_g000001 Rmu_sc0027371.1_g000001 Rmu_sc0028213.1_g000001 Rmu_sc0034526.1_g000001 Rmu_sc0039366.1_g000002 Rmu_ssc0000050.1_g000084 Rmu_ssc0000050.1_g000088 Rmu_ssc0000167.1_g000017
rosa_roxburghii Rroxscaffold_1G00011340 Rroxscaffold_1G00025710 Rroxscaffold_1G00025870 Rroxscaffold_1G00026070 Rroxscaffold_1G00026170 Rroxscaffold_1G00026200 Rroxscaffold_1G00026270 Rroxscaffold_1G00050950 Rroxscaffold_1G00058900 Rroxscaffold_1G00060040 Rroxscaffold_1G00060060 Rroxscaffold_1G00060070 Rroxscaffold_1G00060080 Rroxscaffold_1G00060110 Rroxscaffold_1G00060120 Rroxscaffold_1G00060140 Rroxscaffold_1G00060170 Rroxscaffold_1G00060210 Rroxscaffold_1G00060220 Rroxscaffold_1G00060240 Rroxscaffold_1G00060250 Rroxscaffold_1G00060260 Rroxscaffold_1G00060300 Rroxscaffold_1G00060320 Rroxscaffold_1G00060330 Rroxscaffold_1G00060900 Rroxscaffold_1G00060920 Rroxscaffold_1G00073980 Rroxscaffold_2G00077560 Rroxscaffold_2G00077580 Rroxscaffold_2G00146990 Rroxscaffold_3G00236200 Rroxscaffold_3G00236210 Rroxscaffold_3G00236220 Rroxscaffold_4G00292760 Rroxscaffold_4G00315200 Rroxscaffold_4G00315240 Rroxscaffold_4G00326240 Rroxscaffold_4G00328980 Rroxscaffold_5G00341890 Rroxscaffold_7G00161350 Rroxscaffold_7G00174490 Rroxscaffold_7G00206550
rosa_rugosa Rorug01G0093000 Rorug01G0093100 Rorug01G0128800 Rorug01G0312000 Rorug01G0312000 Rorug02G0581100 Rorug03G0224600 Rorug05G0028500 Rorug05G0032700 Rorug05G0032800 Rorug05G0032900 Rorug05G0032900 Rorug05G0033000 Rorug05G0033100 Rorug05G0033300 Rorug05G0033400 Rorug05G0033900 Rorug05G0034900 Rorug05G0035000 Rorug05G0046900 Rorug05G0047500 Rorug05G0047500 Rorug05G0111600 Rorug05G0287900 Rorug05G0288700 Rorug05G0586900 Rorug06G0231700 Rorug06G0354300 Rorug06G0354400
rosa_samantha Rh1DG122200 Rh2DG686800 Rh5BG136600 Rh6AG344500 Rh6BG351900 Rh6CG359000 Rh6CG359100 Rh6CG387600 Rh6CG480500 Rh6DG344600 Rh6DG467400
rosa_wichuraiana Rw0G010250 Rw0G014820 Rw0G021400 Rw0G023100 Rw1G009450 Rw1G012100 Rw1G012180 Rw1G028360 Rw2G054260 Rw3G024370 Rw3G024420 Rw3G024470 Rw5G010850 Rw5G011010 Rw5G011020 Rw5G011050 Rw5G011080 Rw5G011120 Rw5G012300 Rw5G018470 Rw5G033830 Rw6G008930 Rw6G030070

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 335
Acc16I TGCGCA 1 cut(s) 112
Acc36I ACCTGC 1 cut(s) 174
AccI GTMKAC 1 cut(s) 1073
AciI CCGC 2 cut(s) 47, 117
AcsI RAATTY 3 cut(s) 176, 574, 943
AcyI GRCGYC 2 cut(s) 312, 332
AfaI GTAC 3 cut(s) 55, 670, 1044
AfiI CCNNNNNNNGG 3 cut(s) 43, 525, 818
AgsI TTSAA 3 cut(s) 592, 680, 915
AjnI CCWGG 2 cut(s) 850, 952
AloI GAACNNNNNNTCC 2 cut(s) 500, 532
AluBI AGCT 7 cut(s) 74, 80, 296, 352, 585, 627, 758
AluI AGCT 7 cut(s) 74, 80, 296, 352, 585, 627, 758
Ama87I CYCGRG 1 cut(s) 523
AoxI GGCC 2 cut(s) 723, 809
ApeKI GCWGC 3 cut(s) 71, 624, 703
ApoI RAATTY 3 cut(s) 176, 574, 943
AseI ATTAAT 1 cut(s) 324
Asp700I GAANNNNTTC 1 cut(s) 773
AspLEI GCGC 1 cut(s) 113
AspS9I GGNCC 1 cut(s) 723
AsuC2I CCSGG 1 cut(s) 466
AsuHPI GGTGA 2 cut(s) 281, 939
AvaI CYCGRG 1 cut(s) 523
BarI GAAGNNNNNNTAC 2 cut(s) 146, 178
BbsI GAAGAC 1 cut(s) 336
BbvI GCAGC 3 cut(s) 83, 636, 690
BccI CCATC 1 cut(s) 875
BceAI ACGGC 2 cut(s) 389, 716
BciT130I CCWGG 2 cut(s) 852, 954
BciVI GTATCC 1 cut(s) 147
BcnI CCSGG 1 cut(s) 466
BfaI CTAG 1 cut(s) 336
BfmI CTRYAG 2 cut(s) 622, 825
BfuAI ACCTGC 1 cut(s) 174
BfuI GTATCC 1 cut(s) 147
BisI GCNGC 5 cut(s) 48, 72, 118, 625, 704
BlsI GCNGC 5 cut(s) 49, 73, 119, 626, 705
Bme1390I CCNGG 3 cut(s) 466, 852, 954
BmeT110I CYCGRG 1 cut(s) 523
BmgT120I GGNCC 1 cut(s) 723
BmrFI CCNGG 3 cut(s) 466, 852, 954
BmsI GCATC 1 cut(s) 788
BpiI GAAGAC 1 cut(s) 336
BpmI CTGGAG 3 cut(s) 60, 282, 936
BpuEI CTTGAG 1 cut(s) 66
BpuMI CCSGG 1 cut(s) 466
BsaHI GRCGYC 2 cut(s) 312, 332
BsaJI CCNNGG 2 cut(s) 316, 442
BsaXI ACNNNNNCTCC 2 cut(s) 500, 530
Bsc4I CCNNNNNNNGG 3 cut(s) 43, 525, 818
Bse1I ACTGG 2 cut(s) 556, 841
Bse3DI GCAATG 3 cut(s) 356, 399, 636
BseBI CCWGG 2 cut(s) 852, 954
BseDI CCNNGG 2 cut(s) 316, 442
BseGI GGATG 2 cut(s) 543, 874
BseLI CCNNNNNNNGG 3 cut(s) 43, 525, 818
BseMI GCAATG 3 cut(s) 356, 399, 636
BseMII CTCAG 2 cut(s) 114, 362
BseNI ACTGG 2 cut(s) 556, 841
BseXI GCAGC 3 cut(s) 83, 636, 690
BsgI GTGCAG 1 cut(s) 925
BshFI GGCC 2 cut(s) 725, 811
BsiHKCI CYCGRG 1 cut(s) 523
BsiSI CCGG 2 cut(s) 465, 519
BslI CCNNNNNNNGG 3 cut(s) 43, 525, 818
BsmI GAATGC 1 cut(s) 561
BsnI GGCC 2 cut(s) 725, 811
BsoBI CYCGRG 1 cut(s) 523
Bsp143I GATC 2 cut(s) 375, 1038
Bsp19I CCATGG 1 cut(s) 316
BspACI CCGC 2 cut(s) 47, 117
BspANI GGCC 2 cut(s) 725, 811
BspCNI CTCAG 2 cut(s) 113, 361
BspMAI CTGCAG 1 cut(s) 626
BspMI ACCTGC 1 cut(s) 174
BsrDI GCAATG 3 cut(s) 356, 399, 636
BsrI ACTGG 2 cut(s) 556, 841
BssECI CCNNGG 2 cut(s) 316, 442
BssMI GATC 2 cut(s) 375, 1038
BssNAI GTATAC 1 cut(s) 1074
BssNI GRCGYC 2 cut(s) 312, 332
BssT1I CCWWGG 1 cut(s) 316
Bst1107I GTATAC 1 cut(s) 1074
Bst2UI CCWGG 2 cut(s) 852, 954
Bst4CI ACNGT 2 cut(s) 269, 478
Bst6I CTCTTC 1 cut(s) 369
BstACI GRCGYC 2 cut(s) 312, 332
BstC8I GCNNGC 2 cut(s) 115, 848
BstDEI CTNAG 3 cut(s) 100, 348, 789
BstDSI CCRYGG 1 cut(s) 316
BstENI CCTNNNNNAGG 1 cut(s) 816
BstF5I GGATG 2 cut(s) 543, 874
BstHHI GCGC 1 cut(s) 113
BstKTI GATC 2 cut(s) 378, 1041
BstMBI GATC 2 cut(s) 375, 1038
BstMWI GCNNNNNNNGC 4 cut(s) 77, 117, 358, 638
BstNI CCWGG 2 cut(s) 852, 954
BstNSI RCATGY 1 cut(s) 117
BstSCI CCNGG 3 cut(s) 464, 850, 952
BstSFI CTRYAG 2 cut(s) 622, 825
BstV1I GCAGC 3 cut(s) 83, 636, 690
BstV2I GAAGAC 1 cut(s) 336
BstZ17I GTATAC 1 cut(s) 1074
BsuI GTATCC 1 cut(s) 147
BsuRI GGCC 2 cut(s) 725, 811
BtgI CCRYGG 1 cut(s) 316
BtsCI GGATG 2 cut(s) 543, 874
BtsI GCAGTG 1 cut(s) 913
BtsIMutI CAGTG 3 cut(s) 549, 848, 913
BveI ACCTGC 1 cut(s) 174
Cac8I GCNNGC 2 cut(s) 115, 848
CfoI GCGC 1 cut(s) 113
Cfr13I GGNCC 1 cut(s) 723
CseI GACGC 2 cut(s) 320, 790
Csp6I GTAC 3 cut(s) 54, 669, 1043
CviAII CATG 5 cut(s) 114, 148, 317, 472, 1000
CviQI GTAC 3 cut(s) 54, 669, 1043
DdeI CTNAG 3 cut(s) 100, 348, 789
DpnI GATC 2 cut(s) 377, 1040
DpnII GATC 2 cut(s) 375, 1038
Eam1104I CTCTTC 1 cut(s) 369
EarI CTCTTC 1 cut(s) 369
Eco130I CCWWGG 1 cut(s) 316
Eco147I AGGCCT 1 cut(s) 811
Eco32I GATATC 1 cut(s) 895
Eco88I CYCGRG 1 cut(s) 523
EcoNI CCTNNNNNAGG 1 cut(s) 816
EcoRI GAATTC 1 cut(s) 176
EcoRII CCWGG 2 cut(s) 850, 952
EcoRV GATATC 1 cut(s) 895
EcoT14I CCWWGG 1 cut(s) 316
ErhI CCWWGG 1 cut(s) 316
FaeI CATG 5 cut(s) 117, 151, 320, 475, 1003
FalI AAGNNNNNCTT 2 cut(s) 949, 981
FatI CATG 5 cut(s) 113, 147, 316, 471, 999
FblI GTMKAC 1 cut(s) 1073
Fnu4HI GCNGC 5 cut(s) 48, 72, 118, 625, 704
FokI GGATG 2 cut(s) 530, 861
Fsp4HI GCNGC 5 cut(s) 48, 72, 118, 625, 704
FspAI RTGCGCAY 1 cut(s) 112
FspBI CTAG 1 cut(s) 336
FspI TGCGCA 1 cut(s) 112
GlaI GCGC 1 cut(s) 112
GluI GCNGC 5 cut(s) 48, 72, 118, 625, 704
GsuI CTGGAG 3 cut(s) 60, 282, 936
HaeIII GGCC 2 cut(s) 725, 811
HapII CCGG 2 cut(s) 465, 519
HgaI GACGC 2 cut(s) 320, 790
HhaI GCGC 1 cut(s) 113
Hin1I GRCGYC 2 cut(s) 312, 332
Hin1II CATG 5 cut(s) 117, 151, 320, 475, 1003
Hin6I GCGC 1 cut(s) 111
HinP1I GCGC 1 cut(s) 111
HincII GTYRAC 1 cut(s) 805
HindII GTYRAC 1 cut(s) 805
HinfI GANTC 3 cut(s) 12, 396, 1028
HpaII CCGG 2 cut(s) 465, 519
HphI GGTGA 2 cut(s) 281, 939
Hpy166II GTNNAC 2 cut(s) 805, 1074
Hpy188I TCNGA 2 cut(s) 103, 443
Hpy188III TCNNGA 4 cut(s) 260, 299, 336, 878
Hpy8I GTNNAC 2 cut(s) 805, 1074
HpyAV CCTTC 4 cut(s) 148, 643, 763, 854
HpyCH4III ACNGT 2 cut(s) 269, 478
HpyCH4IV ACGT 2 cut(s) 332, 498
HpyCH4V TGCA 8 cut(s) 425, 471, 559, 624, 641, 783, 906, 1017
HpyF10VI GCNNNNNNNGC 4 cut(s) 77, 117, 358, 638
HpyF3I CTNAG 3 cut(s) 100, 348, 789
HpySE526I ACGT 2 cut(s) 332, 498
Hsp92I GRCGYC 2 cut(s) 312, 332
Hsp92II CATG 5 cut(s) 117, 151, 320, 475, 1003
HspAI GCGC 1 cut(s) 111
Kzo9I GATC 2 cut(s) 375, 1038
LmnI GCTCC 3 cut(s) 79, 301, 521
Lsp1109I GCAGC 3 cut(s) 83, 636, 690
LweI GCATC 1 cut(s) 788
MaeI CTAG 1 cut(s) 336
MaeII ACGT 2 cut(s) 332, 498
MaeIII GTNAC 8 cut(s) 161, 191, 244, 413, 830, 854, 959, 983
MalI GATC 2 cut(s) 377, 1040
MboI GATC 2 cut(s) 375, 1038
MboII GAAGA 3 cut(s) 185, 336, 356
MfeI CAATTG 1 cut(s) 187
MluCI AATT 7 cut(s) 129, 176, 187, 426, 574, 718, 943
MlyI GAGTC 1 cut(s) 6
MnlI CCTC 5 cut(s) 372, 437, 500, 759, 960
MroXI GAANNNNTTC 1 cut(s) 773
MseI TTAA 5 cut(s) 284, 324, 615, 717, 941
MslI CAYNNNNRTG 5 cut(s) 326, 554, 600, 879, 1002
MspI CCGG 2 cut(s) 465, 519
MspR9I CCNGG 3 cut(s) 466, 852, 954
MunI CAATTG 1 cut(s) 187
Mva1269I GAATGC 1 cut(s) 561
MvaI CCWGG 2 cut(s) 852, 954
MwoI GCNNNNNNNGC 4 cut(s) 77, 117, 358, 638
NciI CCSGG 1 cut(s) 466
NcoI CCATGG 1 cut(s) 316
NdeII GATC 2 cut(s) 375, 1038
NlaIII CATG 5 cut(s) 117, 151, 320, 475, 1003
NmuCI GTSAC 1 cut(s) 413
NsbI TGCGCA 1 cut(s) 112
NspI RCATGY 1 cut(s) 117
PaeI GCATGC 1 cut(s) 117
PceI AGGCCT 1 cut(s) 811
PctI GAATGC 1 cut(s) 561
PdmI GAANNNNTTC 1 cut(s) 773
PfeI GAWTC 2 cut(s) 396, 1028
PflFI GACNNNGTC 1 cut(s) 497
PfoI TCCNGGA 1 cut(s) 952
PkrI GCNGC 5 cut(s) 49, 73, 119, 626, 705
PleI GAGTC 1 cut(s) 6
PpsI GAGTC 1 cut(s) 6
PshBI ATTAAT 1 cut(s) 324
Psp6I CCWGG 2 cut(s) 850, 952
PspGI CCWGG 2 cut(s) 850, 952
PspPI GGNCC 1 cut(s) 723
PstI CTGCAG 1 cut(s) 626
PsyI GACNNNGTC 1 cut(s) 497
RsaI GTAC 3 cut(s) 55, 670, 1044
RsaNI GTAC 3 cut(s) 54, 669, 1043
RseI CAYNNNNRTG 5 cut(s) 326, 554, 600, 879, 1002
SaqAI TTAA 5 cut(s) 284, 324, 615, 717, 941
SatI GCNGC 5 cut(s) 48, 72, 118, 625, 704
Sau3AI GATC 2 cut(s) 375, 1038
Sau96I GGNCC 1 cut(s) 723
SchI GAGTC 1 cut(s) 6
ScrFI CCNGG 3 cut(s) 466, 852, 954
SfaNI GCATC 1 cut(s) 788
SfcI CTRYAG 2 cut(s) 622, 825
SmiMI CAYNNNNRTG 5 cut(s) 326, 554, 600, 879, 1002
SmlI CTYRAG 1 cut(s) 81
SmoI CTYRAG 1 cut(s) 81
SphI GCATGC 1 cut(s) 117
Sse9I AATT 7 cut(s) 129, 176, 187, 426, 574, 718, 943
SseBI AGGCCT 1 cut(s) 811
SsiI CCGC 2 cut(s) 47, 117
SspI AATATT 1 cut(s) 282
SspMI CTAG 1 cut(s) 336
StuI AGGCCT 1 cut(s) 811
StyD4I CCNGG 3 cut(s) 464, 850, 952
StyI CCWWGG 1 cut(s) 316
TaaI ACNGT 2 cut(s) 269, 478
TaiI ACGT 2 cut(s) 335, 501
TaqI TCGA 2 cut(s) 492, 599
TasI AATT 7 cut(s) 129, 176, 187, 426, 574, 718, 943
TatI WGTACW 1 cut(s) 53
TauI GCSGC 2 cut(s) 50, 120
TfiI GAWTC 2 cut(s) 396, 1028
Tru1I TTAA 5 cut(s) 284, 324, 615, 717, 941
Tru9I TTAA 5 cut(s) 284, 324, 615, 717, 941
TscAI CASTG 3 cut(s) 556, 848, 913
TseFI GTSAC 1 cut(s) 413
TseI GCWGC 3 cut(s) 71, 624, 703
Tsp45I GTSAC 1 cut(s) 413
TspGWI ACGGA 1 cut(s) 123
TspRI CASTG 3 cut(s) 556, 848, 913
Tth111I GACNNNGTC 1 cut(s) 497
VspI ATTAAT 1 cut(s) 324
XagI CCTNNNNNAGG 1 cut(s) 816
XapI RAATTY 3 cut(s) 176, 574, 943
XbaI TCTAGA 1 cut(s) 335
XceI RCATGY 1 cut(s) 117
XcmI CCANNNNNNNNNTGG 1 cut(s) 848
XmiI GTMKAC 1 cut(s) 1073
XmnI GAANNNNTTC 1 cut(s) 773
XspI CTAG 1 cut(s) 336
ZraI GACGTC 1 cut(s) 333
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.