Rmu_sc0007920.1_g000013

Wall-associated receptor kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0007920.1
OG0000066
Physical Location & Seq
Reverse (-)
32323 .. 34393
2071 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0007920.1_g000013.1.cds

Sequence Viewer

Length: 1890 bp
atgtctatgaggataaagaaaatgtttttgctgcaattggtgctggttgcaatagaggtgctactagtatcatcccaaagagagggttgcccagacaaatgtggcaatgttagcattccctatccgttcggaacaagaaagggttgttactatgatgaggatttcctcattacttgtaataacgcaagttataaccctccgaagccatttcttcgagtaagtgacattgaggtcacaaacatatcgattgatgggaagctctacattactcaagacatagccatggcttgttataccaaatcaggtgtgccctgggaaggcaactacagcccttatctttctttgaaaaagttctacatctcagacaccgataacaaattcataggcgttggttgcgacacctatgcccaaattaggggcttccagggtacaaaccatgagtacacaggtgggtgcttttcgaaatgtaatagcactgaatttctctccacttattcatgctctggcataggctgttgccaaacacctattgctaaaggaatgacttactttgacataaacgtaagcagctacgaaaaccaagcgcaagtttggtacttcaatccctgcagctatgcttttcttgtccaagagggtaagttcaatttcacctccgacatgttgagtgatttaagaaatatctctcagtttcccgtggttctcgattggtcaattggaaatgagacatgcagccagatcaagaaaaatgcgtgtaaggggaatagcaagtgtttggctgttgagaatgggctcgggtatcgctgcaagtgcaacgaaggttacgaagggaatccatacctaaatggctgcactgacattaacgaatgcgaggatccggtaattgccaaaaagtgcaaacaaagatgcataaatacagaggggaactatacttgtgcttgccacaaggggtaccataacaatggcacagcagactcggtagattgtatcgctgaccaaaaatttgttcaaattatagctggactcggtgttggcctcatatccttattaataggcagctcctggttgtacttggtctacaaaagatggaagctcatgaagctaaaggagaagttcttcatccaaaatggaggtttgttgttaaagcaacagctttcggaacgacaaggtggtgccactaaccaaactaccaaaatcttcaccgaagaccaacttaagaaggctaccaaccatttcagtgaagccagaatcgttggcaaaggaggttttggtacagtctacaaagggattatagcagatgaaagagctaaggaaacagtggttgcaattaagaaatccaaacttgtggatcgaagccaaatagagcaattcattaatgaagtactggtgctttcccaaatcaatcacaggaatgtggtgaagcttttgggttgttgtttcgagacagaagtcccactactagtttatgagtttgtcaccaatggtacgctattcgactacatccacaacaaaagcaaggcatccaactttccttgggaaattcgtttaaggatagctgcagaaactgctggagtgctatcacacttgcactctgaagcttctattcccatcattcacagagatgtcaagtccacaaacatactcttggatgataatcttaccgcaaaagtgtctgatttcggtgcctcgagattggttccgtcagatcaagctcagctatctacaatggtgcaaggaacggtagggtatttggatcctgaatacttacagacgagccagttgacggacaagagtgatgtctatagctttggggttgttctggtggaactactaacaggaaagaaggcgctttcgttcgacaagccggagaaggagagaattctagatttctag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
EGF_CA GUB_WAK_bind Pkinase WAK

Protein Analysis

629

Amino Acids

70.25

Weight (kDa)

7.35

Isoelectric Point (pI)

29.31

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000066)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G21210 AT1G21230 AT1G21240 AT1G21240 AT1G21245 AT1G21250 AT1G21270 AT1G22720 AT3G25490
fragaria_vesca FvH4_2g35051 FvH4_2g35051 FvH4_2g35060 FvH4_3g10281 FvH4_3g10285 FvH4_3g10286 FvH4_3g10311 FvH4_3g10311 FvH4_3g10320 FvH4_3g10332 FvH4_3g10340 FvH4_3g10350 FvH4_3g10360 FvH4_3g10390 FvH4_3g10412 FvH4_3g10413 FvH4_3g10461 FvH4_3g10462 FvH4_3g10470 FvH4_3g10510 FvH4_3g10520 FvH4_3g10530 FvH4_3g10550 FvH4_3g10560 FvH4_3g10611 FvH4_3g11730 FvH4_6g53140 FvH4_6g53142 FvH4_7g31880 FvH4_7g31910 FvH4_7g31920
malus_domestica MD05G1269900.v1.1 MD05G1270000.v1.1 MD05G1270200.v1.1 MD05G1270400.v1.1 MD05G1270500.v1.1 MD05G1270600.v1.1 MD05G1270800.v1.1 MD05G1270900.v1.1 MD07G1183800.v1.1 MD08G1107600.v1.1 MD10G1248500.v1.1 MD10G1249200.v1.1 MD10G1249500.v1.1 MD10G1250000.v1.1 MD10G1250500.v1.1 MD10G1250900.v1.1 MD10G1251200.v1.1 MD10G1251400.v1.1 MD13G1004600.v1.1 MD15G1088400.v1.1
prunus_persica Prupe.1G442400_v2.0.a1 Prupe.1G442500_v2.0.a1 Prupe.2G223400_v2.0.a1 Prupe.4G091900_v2.0.a1 Prupe.4G093200_v2.0.a1 Prupe.4G093300_v2.0.a1 Prupe.4G093400_v2.0.a1 Prupe.4G093500_v2.0.a1 Prupe.4G094100_v2.0.a1 Prupe.4G094200_v2.0.a1 Prupe.4G094300_v2.0.a1 Prupe.6G358300_v2.0.a1
pyrus_communis pycom08g08990 pycom10g20660 pycom10g20670 pycom10g20680 pycom10g20710 pycom10g20740 pycom13g00400 pycom15g08290
rosa_chinensis RchiOBHm_Chr1g0326861 RchiOBHm_Chr1g0326871 RchiOBHm_Chr1g0331391 RchiOBHm_Chr1g0336911 RchiOBHm_Chr1g0364001 RchiOBHm_Chr2g0174541 RchiOBHm_Chr2g0175041 RchiOBHm_Chr2g0175101 RchiOBHm_Chr2g0175121 RchiOBHm_Chr3g0486331 RchiOBHm_Chr5g0015581 RchiOBHm_Chr5g0016551 RchiOBHm_Chr5g0016561 RchiOBHm_Chr5g0016581 RchiOBHm_Chr5g0016601 RchiOBHm_Chr5g0016611 RchiOBHm_Chr5g0016641 RchiOBHm_Chr5g0016661 RchiOBHm_Chr5g0016691 RchiOBHm_Chr5g0016701 RchiOBHm_Chr5g0016731 RchiOBHm_Chr5g0016741 RchiOBHm_Chr5g0016811 RchiOBHm_Chr5g0016841 RchiOBHm_Chr5g0016871 RchiOBHm_Chr5g0016881 RchiOBHm_Chr5g0016931 RchiOBHm_Chr5g0017021 RchiOBHm_Chr5g0017041 RchiOBHm_Chr5g0017071 RchiOBHm_Chr5g0017091 RchiOBHm_Chr5g0017121 RchiOBHm_Chr5g0017141 RchiOBHm_Chr5g0017291 RchiOBHm_Chr5g0017321 RchiOBHm_Chr5g0017401 RchiOBHm_Chr5g0019001 RchiOBHm_Chr5g0019071 RchiOBHm_Chr5g0028941 RchiOBHm_Chr5g0052141 RchiOBHm_Chr5g0054721 RchiOBHm_Chr5g0054801 RchiOBHm_Chr5g0054931 RchiOBHm_Chr5g0054941 RchiOBHm_Chr6g0259291 RchiOBHm_Chr6g0292991 RchiOBHm_Chr6g0306911
rosa_laevigata RLG00000009465 RLG00000009468 RLG00000010755 RLG00000011976 RLG00000014541 RLG00000014542 RLG00000015169 RLG00000022308 RLG00000027529 RLG00000029324 RLG00000030244 RLG00000030245 RLG00000032210 RLG00000032211 RLG00000032257 RLG00000032259 RLG00000032260 RLG00000032261 RLG00000032262 RLG00000032268 RLG00000032269 RLG00000032272 RLG00000032282 RLG00000032283 RLG00000032308 RLG00000032413 RLG00000033129 RLG00000034945
rosa_multiflora Rmu_co8241929.1_g000001 Rmu_co8269227.1_g000001 Rmu_co8461259.1_g000001 Rmu_co8495385.1_g000001 Rmu_sc0000028.1_g000003 Rmu_sc0000083.1_g000009 Rmu_sc0000083.1_g000010 Rmu_sc0000083.1_g000031 Rmu_sc0000083.1_g000043 Rmu_sc0000083.1_g000046 Rmu_sc0000083.1_g000047 Rmu_sc0000563.1_g000024 Rmu_sc0000842.1_g000012 Rmu_sc0001235.1_g000001 Rmu_sc0001235.1_g000005 Rmu_sc0001235.1_g000009 Rmu_sc0001235.1_g000015 Rmu_sc0001235.1_g000016 Rmu_sc0001235.1_g000017 Rmu_sc0001473.1_g000036 Rmu_sc0001607.1_g000016 Rmu_sc0001788.1_g000006 Rmu_sc0002018.1_g000008 Rmu_sc0002028.1_g000001 Rmu_sc0002680.1_g000011 Rmu_sc0002798.1_g000023 Rmu_sc0002886.1_g000023 Rmu_sc0002989.1_g000012 Rmu_sc0003064.1_g000009 Rmu_sc0003382.1_g000006 Rmu_sc0003630.1_g000002 Rmu_sc0003630.1_g000047 Rmu_sc0003630.1_g000066 Rmu_sc0003630.1_g000067 Rmu_sc0003649.1_g000010 Rmu_sc0003688.1_g000005 Rmu_sc0003920.1_g000007 Rmu_sc0004765.1_g000007 Rmu_sc0004765.1_g000008 Rmu_sc0004920.1_g000011 Rmu_sc0005223.1_g000008 Rmu_sc0005223.1_g000010 Rmu_sc0005223.1_g000015 Rmu_sc0005223.1_g000016 Rmu_sc0005319.1_g000014 Rmu_sc0005319.1_g000015 Rmu_sc0005319.1_g000018 Rmu_sc0005319.1_g000019 Rmu_sc0005319.1_g000025 Rmu_sc0005418.1_g000007 Rmu_sc0005418.1_g000012 Rmu_sc0006106.1_g000011 Rmu_sc0006914.1_g000012 Rmu_sc0007023.1_g000001 Rmu_sc0007662.1_g000001 Rmu_sc0007920.1_g000002 Rmu_sc0007920.1_g000013 Rmu_sc0008053.1_g000016 Rmu_sc0008053.1_g000017 Rmu_sc0008053.1_g000018 Rmu_sc0008053.1_g000023 Rmu_sc0008053.1_g000050 Rmu_sc0009042.1_g000007 Rmu_sc0009042.1_g000008 Rmu_sc0010642.1_g000008 Rmu_sc0011109.1_g000002 Rmu_sc0011314.1_g000006 Rmu_sc0011974.1_g000006 Rmu_sc0012179.1_g000009 Rmu_sc0015169.1_g000001 Rmu_sc0016368.1_g000002 Rmu_sc0022659.1_g000001 Rmu_sc0027371.1_g000001 Rmu_sc0028213.1_g000001 Rmu_sc0034526.1_g000001 Rmu_sc0039366.1_g000002 Rmu_ssc0000050.1_g000084 Rmu_ssc0000050.1_g000088 Rmu_ssc0000167.1_g000017
rosa_roxburghii Rroxscaffold_1G00011340 Rroxscaffold_1G00025710 Rroxscaffold_1G00025870 Rroxscaffold_1G00026070 Rroxscaffold_1G00026170 Rroxscaffold_1G00026200 Rroxscaffold_1G00026270 Rroxscaffold_1G00050950 Rroxscaffold_1G00058900 Rroxscaffold_1G00060040 Rroxscaffold_1G00060060 Rroxscaffold_1G00060070 Rroxscaffold_1G00060080 Rroxscaffold_1G00060110 Rroxscaffold_1G00060120 Rroxscaffold_1G00060140 Rroxscaffold_1G00060170 Rroxscaffold_1G00060210 Rroxscaffold_1G00060220 Rroxscaffold_1G00060240 Rroxscaffold_1G00060250 Rroxscaffold_1G00060260 Rroxscaffold_1G00060300 Rroxscaffold_1G00060320 Rroxscaffold_1G00060330 Rroxscaffold_1G00060900 Rroxscaffold_1G00060920 Rroxscaffold_1G00073980 Rroxscaffold_2G00077560 Rroxscaffold_2G00077580 Rroxscaffold_2G00146990 Rroxscaffold_3G00236200 Rroxscaffold_3G00236210 Rroxscaffold_3G00236220 Rroxscaffold_4G00292760 Rroxscaffold_4G00315200 Rroxscaffold_4G00315240 Rroxscaffold_4G00326240 Rroxscaffold_4G00328980 Rroxscaffold_5G00341890 Rroxscaffold_7G00161350 Rroxscaffold_7G00174490 Rroxscaffold_7G00206550
rosa_rugosa Rorug01G0093000 Rorug01G0093100 Rorug01G0128800 Rorug01G0312000 Rorug01G0312000 Rorug02G0581100 Rorug03G0224600 Rorug05G0028500 Rorug05G0032700 Rorug05G0032800 Rorug05G0032900 Rorug05G0032900 Rorug05G0033000 Rorug05G0033100 Rorug05G0033300 Rorug05G0033400 Rorug05G0033900 Rorug05G0034900 Rorug05G0035000 Rorug05G0046900 Rorug05G0047500 Rorug05G0047500 Rorug05G0111600 Rorug05G0287900 Rorug05G0288700 Rorug05G0586900 Rorug06G0231700 Rorug06G0354300 Rorug06G0354400
rosa_samantha Rh1DG122200 Rh2DG686800 Rh5BG136600 Rh6AG344500 Rh6BG351900 Rh6CG359000 Rh6CG359100 Rh6CG387600 Rh6CG480500 Rh6DG344600 Rh6DG467400
rosa_wichuraiana Rw0G010250 Rw0G014820 Rw0G021400 Rw0G023100 Rw1G009450 Rw1G012100 Rw1G012180 Rw1G028360 Rw2G054260 Rw3G024370 Rw3G024420 Rw3G024470 Rw5G010850 Rw5G011010 Rw5G011020 Rw5G011050 Rw5G011080 Rw5G011120 Rw5G012300 Rw5G018470 Rw5G033830 Rw6G008930 Rw6G030070

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 192
AasI GACNNNNNNGTC 1 cut(s) 230
Acc65I GGTACC 1 cut(s) 948
AccB1I GGYRCC 3 cut(s) 948, 1169, 1679
AccI GTMKAC 2 cut(s) 1074, 1275
AciI CCGC 1 cut(s) 1659
AclWI GGATC 5 cut(s) 866, 879, 1353, 1745, 1758
AcsI RAATTY 5 cut(s) 377, 479, 998, 1536, 1875
AcuI CTGAAG 1 cut(s) 1611
AfaI GTAC 8 cut(s) 430, 443, 596, 950, 1067, 1270, 1380, 1483
AfiI CCNNNNNNNGG 5 cut(s) 82, 317, 414, 415, 1780
AflII CTTAAG 1 cut(s) 1211
AflIII ACRYGT 1 cut(s) 657
AgsI TTSAA 4 cut(s) 346, 601, 643, 1007
AhlI ACTAGT 2 cut(s) 64, 1456
AjnI CCWGG 3 cut(s) 311, 423, 1058
AjuI GAANNNNNNNTTGG 2 cut(s) 987, 1019
Alw26I GTCTC 2 cut(s) 716, 1433
AlwI GGATC 5 cut(s) 866, 879, 1353, 1745, 1758
AlwNI CAGNNNCTG 2 cut(s) 1059, 1562
Ama87I CYCGRG 2 cut(s) 791, 1684
AoxI GGCC 1 cut(s) 1030
ApeKI GCWGC 8 cut(s) 31, 567, 609, 729, 801, 846, 1053, 1553
ApoI RAATTY 5 cut(s) 377, 479, 998, 1536, 1875
ArsI GACNNNNNNTTYG 2 cut(s) 983, 1015
AseI ATTAAT 2 cut(s) 1046, 1371
Asp700I GAANNNNTTC 2 cut(s) 350, 1112
Asp718I GGTACC 1 cut(s) 948
AspLEI GCGC 2 cut(s) 586, 1846
AsuHPI GGTGA 4 cut(s) 640, 1189, 1426, 1465
AsuII TTCGAA 1 cut(s) 461
AvaI CYCGRG 2 cut(s) 791, 1684
BaeGI GKGCMC 1 cut(s) 312
BamHI GGATCC 2 cut(s) 871, 1750
BanI GGYRCC 3 cut(s) 948, 1169, 1679
BanII GRGCYC 1 cut(s) 792
BarI GAAGNNNNNNTAC 2 cut(s) 1437, 1469
BbsI GAAGAC 1 cut(s) 1209
BbvI GCAGC 8 cut(s) 18, 579, 621, 741, 788, 833, 1065, 1540
BccI CCATC 3 cut(s) 245, 1077, 1613
BcgI CGANNNNNNTGC 2 cut(s) 386, 420
BciT130I CCWGG 3 cut(s) 313, 425, 1060
BcoDI GTCTC 2 cut(s) 716, 1433
BcuI ACTAGT 2 cut(s) 64, 1456
BfaI CTAG 4 cut(s) 65, 1457, 1880, 1888
BfmI CTRYAG 4 cut(s) 325, 607, 1554, 1798
BfoI RGCGCY 1 cut(s) 1847
BfrI CTTAAG 1 cut(s) 1211
BisI GCNGC 8 cut(s) 32, 568, 610, 730, 802, 847, 1054, 1554
BlpI GCTNAGC 1 cut(s) 1710
BlsI GCNGC 8 cut(s) 33, 569, 611, 731, 803, 848, 1055, 1555
BmcAI AGTACT 1 cut(s) 1380
Bme1390I CCNGG 3 cut(s) 313, 425, 1060
BmeT110I CYCGRG 2 cut(s) 791, 1684
BmiI GGNNCC 6 cut(s) 873, 950, 1171, 1681, 1695, 1752
BmrFI CCNGG 3 cut(s) 313, 425, 1060
BmsI GCATC 2 cut(s) 893, 1526
BoxI GACNNNNGTC 1 cut(s) 1445
BpiI GAAGAC 1 cut(s) 1209
BpmI CTGGAG 1 cut(s) 1587
Bpu10I CCTNAGC 1 cut(s) 1305
Bpu1102I GCTNAGC 1 cut(s) 1710
Bpu14I TTCGAA 1 cut(s) 461
BpuEI CTTGAG 1 cut(s) 255
Bsa29I ATCGAT 1 cut(s) 245
BsaBI GATNNNNATC 1 cut(s) 1650
BsaJI CCNNGG 6 cut(s) 282, 311, 312, 424, 693, 1529
BsaWI WCCGGW 1 cut(s) 874
Bsc4I CCNNNNNNNGG 5 cut(s) 82, 317, 414, 415, 1780
Bse1I ACTGG 2 cut(s) 1386, 1774
Bse3DI GCAATG 1 cut(s) 112
Bse8I GATNNNNATC 1 cut(s) 1650
BseBI CCWGG 3 cut(s) 313, 425, 1060
BseCI ATCGAT 1 cut(s) 245
BseDI CCNNGG 6 cut(s) 282, 311, 312, 424, 693, 1529
BseGI GGATG 5 cut(s) 71, 1116, 1497, 1517, 1651
BseJI GATNNNNATC 1 cut(s) 1650
BseLI CCNNNNNNNGG 5 cut(s) 82, 317, 414, 415, 1780
BseMI GCAATG 1 cut(s) 112
BseMII CTCAG 3 cut(s) 375, 698, 1724
BseNI ACTGG 2 cut(s) 1386, 1774
BseSI GKGCMC 1 cut(s) 312
BseXI GCAGC 8 cut(s) 18, 579, 621, 741, 788, 833, 1065, 1540
BsgI GTGCAG 1 cut(s) 832
BshFI GGCC 1 cut(s) 1032
BshNI GGYRCC 3 cut(s) 948, 1169, 1679
BshVI ATCGAT 1 cut(s) 245
BsiHKCI CYCGRG 2 cut(s) 791, 1684
BsiSI CCGG 2 cut(s) 875, 1862
BslFI GGGAC 1 cut(s) 1433
BslI CCNNNNNNNGG 5 cut(s) 82, 317, 414, 415, 1780
BsmAI GTCTC 2 cut(s) 716, 1433
BsmFI GGGAC 1 cut(s) 1433
BsmI GAATGC 2 cut(s) 114, 869
BsnI GGCC 1 cut(s) 1032
BsoBI CYCGRG 2 cut(s) 791, 1684
Bsp119I TTCGAA 1 cut(s) 461
Bsp1286I GDGCHC 2 cut(s) 312, 792
Bsp143I GATC 5 cut(s) 735, 871, 1345, 1702, 1750
Bsp1720I GCTNAGC 1 cut(s) 1710
Bsp19I CCATGG 1 cut(s) 282
BspACI CCGC 1 cut(s) 1659
BspANI GGCC 1 cut(s) 1032
BspCNI CTCAG 3 cut(s) 374, 697, 1723
BspDI ATCGAT 1 cut(s) 245
BspHI TCATGA 1 cut(s) 1092
BspLI GGNNCC 6 cut(s) 873, 950, 1171, 1681, 1695, 1752
BspMAI CTGCAG 2 cut(s) 611, 1558
BspPI GGATC 5 cut(s) 866, 879, 1353, 1745, 1758
BspT104I TTCGAA 1 cut(s) 461
BspT107I GGYRCC 3 cut(s) 948, 1169, 1679
BspTI CTTAAG 1 cut(s) 1211
BsrDI GCAATG 1 cut(s) 112
BsrI ACTGG 2 cut(s) 1386, 1774
BssECI CCNNGG 6 cut(s) 282, 311, 312, 424, 693, 1529
BssMI GATC 5 cut(s) 735, 871, 1345, 1702, 1750
BssT1I CCWWGG 2 cut(s) 282, 1529
Bst2UI CCWGG 3 cut(s) 313, 425, 1060
Bst4CI ACNGT 3 cut(s) 1273, 1315, 1738
BstAFI CTTAAG 1 cut(s) 1211
BstAPI GCANNNNNTGC 2 cut(s) 40, 1562
BstBI TTCGAA 1 cut(s) 461
BstC8I GCNNGC 1 cut(s) 937
BstDEI CTNAG 4 cut(s) 361, 684, 1305, 1710
BstDSI CCRYGG 2 cut(s) 282, 693
BstF5I GGATG 5 cut(s) 71, 1116, 1497, 1517, 1651
BstH2I RGCGCY 1 cut(s) 1847
BstHHI GCGC 2 cut(s) 586, 1846
BstKTI GATC 5 cut(s) 738, 874, 1348, 1705, 1753
BstMAI GTCTC 2 cut(s) 716, 1433
BstMBI GATC 5 cut(s) 735, 871, 1345, 1702, 1750
BstMWI GCNNNNNNNGC 7 cut(s) 40, 111, 327, 393, 807, 1096, 1562
BstNI CCWGG 3 cut(s) 313, 425, 1060
BstNSI RCATGY 2 cut(s) 661, 729
BstPAI GACNNNNGTC 1 cut(s) 1445
BstSCI CCNGG 3 cut(s) 311, 423, 1058
BstSFI CTRYAG 4 cut(s) 325, 607, 1554, 1798
BstSLI GKGCMC 1 cut(s) 312
BstV1I GCAGC 8 cut(s) 18, 579, 621, 741, 788, 833, 1065, 1540
BstV2I GAAGAC 1 cut(s) 1209
BstX2I RGATCY 2 cut(s) 871, 1750
BstXI CCANNNNNNTGG 2 cut(s) 959, 1342
BstYI RGATCY 2 cut(s) 871, 1750
Bsu15I ATCGAT 1 cut(s) 245
BsuRI GGCC 1 cut(s) 1032
BsuTUI ATCGAT 1 cut(s) 245
BtgI CCRYGG 2 cut(s) 282, 693
BtsCI GGATG 5 cut(s) 71, 1116, 1497, 1517, 1651
BtsIMutI CAGTG 4 cut(s) 474, 849, 1240, 1320
Cac8I GCNNGC 1 cut(s) 937
CaiI CAGNNNCTG 2 cut(s) 1059, 1562
CciI TCATGA 1 cut(s) 1092
CfoI GCGC 2 cut(s) 586, 1846
ClaI ATCGAT 1 cut(s) 245
Csp6I GTAC 8 cut(s) 429, 442, 595, 949, 1066, 1269, 1379, 1482
CviAII CATG 6 cut(s) 283, 437, 498, 658, 726, 1093
CviQI GTAC 8 cut(s) 429, 442, 595, 949, 1066, 1269, 1379, 1482
DdeI CTNAG 4 cut(s) 361, 684, 1305, 1710
DpnI GATC 5 cut(s) 737, 873, 1347, 1704, 1752
DpnII GATC 5 cut(s) 735, 871, 1345, 1702, 1750
DrdI GACNNNNNNGTC 1 cut(s) 230
DseDI GACNNNNNNGTC 1 cut(s) 230
Eco130I CCWWGG 2 cut(s) 282, 1529
Eco24I GRGCYC 1 cut(s) 792
Eco57I CTGAAG 1 cut(s) 1611
Eco88I CYCGRG 2 cut(s) 791, 1684
EcoRI GAATTC 1 cut(s) 1875
EcoRII CCWGG 3 cut(s) 311, 423, 1058
EcoT14I CCWWGG 2 cut(s) 282, 1529
EcoT22I ATGCAT 1 cut(s) 908
EcoT38I GRGCYC 1 cut(s) 792
ErhI CCWWGG 2 cut(s) 282, 1529
FaeI CATG 6 cut(s) 286, 440, 501, 661, 729, 1096
FalI AAGNNNNNCTT 2 cut(s) 1194, 1226
FaqI GGGAC 1 cut(s) 1433
FatI CATG 6 cut(s) 282, 436, 497, 657, 725, 1092
FblI GTMKAC 2 cut(s) 1074, 1275
Fnu4HI GCNGC 8 cut(s) 32, 568, 610, 730, 802, 847, 1054, 1554
FokI GGATG 5 cut(s) 58, 1103, 1484, 1504, 1658
FriOI GRGCYC 1 cut(s) 792
Fsp4HI GCNGC 8 cut(s) 32, 568, 610, 730, 802, 847, 1054, 1554
FspBI CTAG 4 cut(s) 65, 1457, 1880, 1888
GlaI GCGC 2 cut(s) 585, 1845
GluI GCNGC 8 cut(s) 32, 568, 610, 730, 802, 847, 1054, 1554
GsuI CTGGAG 1 cut(s) 1587
HaeII RGCGCY 1 cut(s) 1847
HaeIII GGCC 1 cut(s) 1032
HapII CCGG 2 cut(s) 875, 1862
HhaI GCGC 2 cut(s) 586, 1846
Hin1II CATG 6 cut(s) 286, 440, 501, 661, 729, 1096
Hin6I GCGC 2 cut(s) 584, 1844
HinP1I GCGC 2 cut(s) 584, 1844
HincII GTYRAC 1 cut(s) 1779
HindII GTYRAC 1 cut(s) 1779
HindIII AAGCTT 2 cut(s) 1418, 1593
HinfI GANTC 4 cut(s) 829, 971, 1020, 1245
HpaII CCGG 2 cut(s) 875, 1862
HphI GGTGA 4 cut(s) 640, 1189, 1426, 1465
Hpy166II GTNNAC 5 cut(s) 444, 1075, 1276, 1629, 1779
Hpy188I TCNGA 8 cut(s) 131, 201, 364, 655, 1156, 1591, 1672, 1702
Hpy188III TCNNGA 8 cut(s) 272, 701, 739, 1093, 1438, 1686, 1754, 1880
Hpy8I GTNNAC 5 cut(s) 444, 1075, 1276, 1629, 1779
HpyAV CCTTC 6 cut(s) 311, 809, 818, 1210, 1834, 1861
HpyCH4III ACNGT 3 cut(s) 1273, 1315, 1738
HpyCH4IV ACGT 1 cut(s) 561
HpyF10VI GCNNNNNNNGC 7 cut(s) 40, 111, 327, 393, 807, 1096, 1562
HpyF3I CTNAG 4 cut(s) 361, 684, 1305, 1710
HpySE526I ACGT 1 cut(s) 561
Hsp92II CATG 6 cut(s) 286, 440, 501, 661, 729, 1096
HspAI GCGC 2 cut(s) 584, 1844
KpnI GGTACC 1 cut(s) 952
Kzo9I GATC 5 cut(s) 735, 871, 1345, 1702, 1750
LmnI GCTCC 1 cut(s) 1061
Lsp1109I GCAGC 8 cut(s) 18, 579, 621, 741, 788, 833, 1065, 1540
LweI GCATC 2 cut(s) 893, 1526
MaeI CTAG 4 cut(s) 65, 1457, 1880, 1888
MaeII ACGT 1 cut(s) 561
MaeIII GTNAC 5 cut(s) 146, 221, 232, 818, 1471
MalI GATC 5 cut(s) 737, 873, 1347, 1704, 1752
MboI GATC 5 cut(s) 735, 871, 1345, 1702, 1750
MboII GAAGA 4 cut(s) 203, 1105, 1186, 1214
MfeI CAATTG 2 cut(s) 35, 711
MflI RGATCY 2 cut(s) 871, 1750
MhlI GDGCHC 2 cut(s) 312, 792
MlyI GAGTC 2 cut(s) 965, 1014
MmeI TCCRAC 2 cut(s) 678, 1545
Mph1103I ATGCAT 1 cut(s) 908
MroXI GAANNNNTTC 2 cut(s) 350, 1112
MseI TTAA 8 cut(s) 671, 858, 1046, 1139, 1212, 1326, 1371, 1544
MslI CAYNNNNRTG 5 cut(s) 281, 957, 1233, 1407, 1617
MspCI CTTAAG 1 cut(s) 1211
MspI CCGG 2 cut(s) 875, 1862
MspR9I CCNGG 3 cut(s) 313, 425, 1060
MunI CAATTG 2 cut(s) 35, 711
Mva1269I GAATGC 2 cut(s) 114, 869
MvaI CCWGG 3 cut(s) 313, 425, 1060
MwoI GCNNNNNNNGC 7 cut(s) 40, 111, 327, 393, 807, 1096, 1562
NcoI CCATGG 1 cut(s) 282
NdeII GATC 5 cut(s) 735, 871, 1345, 1702, 1750
NlaIII CATG 6 cut(s) 286, 440, 501, 661, 729, 1096
NlaIV GGNNCC 6 cut(s) 873, 950, 1171, 1681, 1695, 1752
NmuCI GTSAC 3 cut(s) 221, 232, 1471
NsiI ATGCAT 1 cut(s) 908
NspI RCATGY 2 cut(s) 661, 729
NspV TTCGAA 1 cut(s) 461
PaeR7I CTCGAG 1 cut(s) 1684
PagI TCATGA 1 cut(s) 1092
PasI CCCWGGG 1 cut(s) 312
PciI ACATGT 1 cut(s) 657
PcsI WCGNNNNNNNCGW 1 cut(s) 819
PctI GAATGC 2 cut(s) 114, 869
PdmI GAANNNNTTC 2 cut(s) 350, 1112
PfeI GAWTC 2 cut(s) 829, 1245
PkrI GCNGC 8 cut(s) 33, 569, 611, 731, 803, 848, 1055, 1555
PleI GAGTC 2 cut(s) 965, 1014
PpsI GAGTC 2 cut(s) 965, 1014
PscI ACATGT 1 cut(s) 657
PshAI GACNNNNGTC 1 cut(s) 1445
PshBI ATTAAT 2 cut(s) 1046, 1371
PsiI TTATAA 1 cut(s) 192
Psp6I CCWGG 3 cut(s) 311, 423, 1058
PspGI CCWGG 3 cut(s) 311, 423, 1058
PspN4I GGNNCC 6 cut(s) 873, 950, 1171, 1681, 1695, 1752
PstI CTGCAG 2 cut(s) 611, 1558
PstNI CAGNNNCTG 2 cut(s) 1059, 1562
PsuI RGATCY 2 cut(s) 871, 1750
RsaI GTAC 8 cut(s) 430, 443, 596, 950, 1067, 1270, 1380, 1483
RsaNI GTAC 8 cut(s) 429, 442, 595, 949, 1066, 1269, 1379, 1482
RseI CAYNNNNRTG 5 cut(s) 281, 957, 1233, 1407, 1617
SaqAI TTAA 8 cut(s) 671, 858, 1046, 1139, 1212, 1326, 1371, 1544
SatI GCNGC 8 cut(s) 32, 568, 610, 730, 802, 847, 1054, 1554
Sau3AI GATC 5 cut(s) 735, 871, 1345, 1702, 1750
ScaI AGTACT 1 cut(s) 1380
SchI GAGTC 2 cut(s) 965, 1014
ScrFI CCNGG 3 cut(s) 313, 425, 1060
SduI GDGCHC 2 cut(s) 312, 792
SfaNI GCATC 2 cut(s) 893, 1526
SfcI CTRYAG 4 cut(s) 325, 607, 1554, 1798
Sfr274I CTCGAG 1 cut(s) 1684
SfuI TTCGAA 1 cut(s) 461
SlaI CTCGAG 1 cut(s) 1684
SmiMI CAYNNNNRTG 5 cut(s) 281, 957, 1233, 1407, 1617
SmlI CTYRAG 3 cut(s) 270, 1211, 1684
SmoI CTYRAG 3 cut(s) 270, 1211, 1684
SpeI ACTAGT 2 cut(s) 64, 1456
SsiI CCGC 1 cut(s) 1659
SspMI CTAG 4 cut(s) 65, 1457, 1880, 1888
StyD4I CCNGG 3 cut(s) 311, 423, 1058
StyI CCWWGG 2 cut(s) 282, 1529
TaaI ACNGT 3 cut(s) 1273, 1315, 1738
TaiI ACGT 1 cut(s) 564
TaqI TCGA 9 cut(s) 214, 245, 461, 702, 1348, 1437, 1491, 1685, 1854
TatI WGTACW 3 cut(s) 441, 1065, 1378
TfiI GAWTC 2 cut(s) 829, 1245
Tru1I TTAA 8 cut(s) 671, 858, 1046, 1139, 1212, 1326, 1371, 1544
Tru9I TTAA 8 cut(s) 671, 858, 1046, 1139, 1212, 1326, 1371, 1544
TscAI CASTG 4 cut(s) 481, 856, 1240, 1320
TseFI GTSAC 3 cut(s) 221, 232, 1471
TseI GCWGC 8 cut(s) 31, 567, 609, 729, 801, 846, 1053, 1553
Tsp45I GTSAC 3 cut(s) 221, 232, 1471
TspDTI ATGAA 7 cut(s) 370, 486, 1105, 1109, 1311, 1357, 1389
TspGWI ACGGA 3 cut(s) 114, 1686, 1796
TspRI CASTG 4 cut(s) 481, 856, 1240, 1320
Vha464I CTTAAG 1 cut(s) 1211
VspI ATTAAT 2 cut(s) 1046, 1371
XapI RAATTY 5 cut(s) 377, 479, 998, 1536, 1875
XbaI TCTAGA 1 cut(s) 1879
XceI RCATGY 2 cut(s) 661, 729
XhoI CTCGAG 1 cut(s) 1684
XmiI GTMKAC 2 cut(s) 1074, 1275
XmnI GAANNNNTTC 2 cut(s) 350, 1112
XspI CTAG 4 cut(s) 65, 1457, 1880, 1888
ZrmI AGTACT 1 cut(s) 1380
Zsp2I ATGCAT 1 cut(s) 908
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.