Rmu_co8269227.1_g000001

Wall-associated receptor kinase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_co8269227.1
Physical Location & Seq
Reverse (-)
2 .. 738
737 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_co8269227.1_g000001.1.cds

Sequence Viewer

Length: 614 bp
ctgcctcttccttacacgatctccagttccaaaagcaagttctatgccgttggttgtgacgttcgtgcaattatacaaggcttccgaggaggagaagagttgatgaccgggtgcatatccgtatgcaacagccttgacaacgtcgataagaactcttgctccggcgctgggtgttgccagactaacatcccctgcggactaaagaatacgtcggtcaaggtggataggtacaaaaataatttgagagtaagggattttaacccctgcagctacgcctttattgtagaacaaggccagtttaatttctcccctgcgagttttaaagagctgaaaaacactgaaaagcttccaatggttcttaattgggcaattgggaaggacacaaatccctgtaatgaagctcaaaagaggaaggatttcatatgcacggctaatagcaggtgcgtcaaccctaacagggggtcagtaggttacttgtgccggtgcttgcctggttatgaaggaaacccttaccacccaggtggttgccaagatattgatgagtgcagggcttcaaacccctgccagaacggacggtgcttaaatactccacctccaggaaaatactcttgttc
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

205

Amino Acids

22.45

Weight (kDa)

8.61

Isoelectric Point (pI)

23.06

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000066)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G21210 AT1G21230 AT1G21240 AT1G21240 AT1G21245 AT1G21250 AT1G21270 AT1G22720 AT3G25490
fragaria_vesca FvH4_2g35051 FvH4_2g35051 FvH4_2g35060 FvH4_3g10281 FvH4_3g10285 FvH4_3g10286 FvH4_3g10311 FvH4_3g10311 FvH4_3g10320 FvH4_3g10332 FvH4_3g10340 FvH4_3g10350 FvH4_3g10360 FvH4_3g10390 FvH4_3g10412 FvH4_3g10413 FvH4_3g10461 FvH4_3g10462 FvH4_3g10470 FvH4_3g10510 FvH4_3g10520 FvH4_3g10530 FvH4_3g10550 FvH4_3g10560 FvH4_3g10611 FvH4_3g11730 FvH4_6g53140 FvH4_6g53142 FvH4_7g31880 FvH4_7g31910 FvH4_7g31920
malus_domestica MD05G1269900.v1.1 MD05G1270000.v1.1 MD05G1270200.v1.1 MD05G1270400.v1.1 MD05G1270500.v1.1 MD05G1270600.v1.1 MD05G1270800.v1.1 MD05G1270900.v1.1 MD07G1183800.v1.1 MD08G1107600.v1.1 MD10G1248500.v1.1 MD10G1249200.v1.1 MD10G1249500.v1.1 MD10G1250000.v1.1 MD10G1250500.v1.1 MD10G1250900.v1.1 MD10G1251200.v1.1 MD10G1251400.v1.1 MD13G1004600.v1.1 MD15G1088400.v1.1
prunus_persica Prupe.1G442400_v2.0.a1 Prupe.1G442500_v2.0.a1 Prupe.2G223400_v2.0.a1 Prupe.4G091900_v2.0.a1 Prupe.4G093200_v2.0.a1 Prupe.4G093300_v2.0.a1 Prupe.4G093400_v2.0.a1 Prupe.4G093500_v2.0.a1 Prupe.4G094100_v2.0.a1 Prupe.4G094200_v2.0.a1 Prupe.4G094300_v2.0.a1 Prupe.6G358300_v2.0.a1
pyrus_communis pycom08g08990 pycom10g20660 pycom10g20670 pycom10g20680 pycom10g20710 pycom10g20740 pycom13g00400 pycom15g08290
rosa_chinensis RchiOBHm_Chr1g0326861 RchiOBHm_Chr1g0326871 RchiOBHm_Chr1g0331391 RchiOBHm_Chr1g0336911 RchiOBHm_Chr1g0364001 RchiOBHm_Chr2g0174541 RchiOBHm_Chr2g0175041 RchiOBHm_Chr2g0175101 RchiOBHm_Chr2g0175121 RchiOBHm_Chr3g0486331 RchiOBHm_Chr5g0015581 RchiOBHm_Chr5g0016551 RchiOBHm_Chr5g0016561 RchiOBHm_Chr5g0016581 RchiOBHm_Chr5g0016601 RchiOBHm_Chr5g0016611 RchiOBHm_Chr5g0016641 RchiOBHm_Chr5g0016661 RchiOBHm_Chr5g0016691 RchiOBHm_Chr5g0016701 RchiOBHm_Chr5g0016731 RchiOBHm_Chr5g0016741 RchiOBHm_Chr5g0016811 RchiOBHm_Chr5g0016841 RchiOBHm_Chr5g0016871 RchiOBHm_Chr5g0016881 RchiOBHm_Chr5g0016931 RchiOBHm_Chr5g0017021 RchiOBHm_Chr5g0017041 RchiOBHm_Chr5g0017071 RchiOBHm_Chr5g0017091 RchiOBHm_Chr5g0017121 RchiOBHm_Chr5g0017141 RchiOBHm_Chr5g0017291 RchiOBHm_Chr5g0017321 RchiOBHm_Chr5g0017401 RchiOBHm_Chr5g0019001 RchiOBHm_Chr5g0019071 RchiOBHm_Chr5g0028941 RchiOBHm_Chr5g0052141 RchiOBHm_Chr5g0054721 RchiOBHm_Chr5g0054801 RchiOBHm_Chr5g0054931 RchiOBHm_Chr5g0054941 RchiOBHm_Chr6g0259291 RchiOBHm_Chr6g0292991 RchiOBHm_Chr6g0306911
rosa_laevigata RLG00000009465 RLG00000009468 RLG00000010755 RLG00000011976 RLG00000014541 RLG00000014542 RLG00000015169 RLG00000022308 RLG00000027529 RLG00000029324 RLG00000030244 RLG00000030245 RLG00000032210 RLG00000032211 RLG00000032257 RLG00000032259 RLG00000032260 RLG00000032261 RLG00000032262 RLG00000032268 RLG00000032269 RLG00000032272 RLG00000032282 RLG00000032283 RLG00000032308 RLG00000032413 RLG00000033129 RLG00000034945
rosa_multiflora Rmu_co8241929.1_g000001 Rmu_co8269227.1_g000001 Rmu_co8461259.1_g000001 Rmu_co8495385.1_g000001 Rmu_sc0000028.1_g000003 Rmu_sc0000083.1_g000009 Rmu_sc0000083.1_g000010 Rmu_sc0000083.1_g000031 Rmu_sc0000083.1_g000043 Rmu_sc0000083.1_g000046 Rmu_sc0000083.1_g000047 Rmu_sc0000563.1_g000024 Rmu_sc0000842.1_g000012 Rmu_sc0001235.1_g000001 Rmu_sc0001235.1_g000005 Rmu_sc0001235.1_g000009 Rmu_sc0001235.1_g000015 Rmu_sc0001235.1_g000016 Rmu_sc0001235.1_g000017 Rmu_sc0001473.1_g000036 Rmu_sc0001607.1_g000016 Rmu_sc0001788.1_g000006 Rmu_sc0002018.1_g000008 Rmu_sc0002028.1_g000001 Rmu_sc0002680.1_g000011 Rmu_sc0002798.1_g000023 Rmu_sc0002886.1_g000023 Rmu_sc0002989.1_g000012 Rmu_sc0003064.1_g000009 Rmu_sc0003382.1_g000006 Rmu_sc0003630.1_g000002 Rmu_sc0003630.1_g000047 Rmu_sc0003630.1_g000066 Rmu_sc0003630.1_g000067 Rmu_sc0003649.1_g000010 Rmu_sc0003688.1_g000005 Rmu_sc0003920.1_g000007 Rmu_sc0004765.1_g000007 Rmu_sc0004765.1_g000008 Rmu_sc0004920.1_g000011 Rmu_sc0005223.1_g000008 Rmu_sc0005223.1_g000010 Rmu_sc0005223.1_g000015 Rmu_sc0005223.1_g000016 Rmu_sc0005319.1_g000014 Rmu_sc0005319.1_g000015 Rmu_sc0005319.1_g000018 Rmu_sc0005319.1_g000019 Rmu_sc0005319.1_g000025 Rmu_sc0005418.1_g000007 Rmu_sc0005418.1_g000012 Rmu_sc0006106.1_g000011 Rmu_sc0006914.1_g000012 Rmu_sc0007023.1_g000001 Rmu_sc0007662.1_g000001 Rmu_sc0007920.1_g000002 Rmu_sc0007920.1_g000013 Rmu_sc0008053.1_g000016 Rmu_sc0008053.1_g000017 Rmu_sc0008053.1_g000018 Rmu_sc0008053.1_g000023 Rmu_sc0008053.1_g000050 Rmu_sc0009042.1_g000007 Rmu_sc0009042.1_g000008 Rmu_sc0010642.1_g000008 Rmu_sc0011109.1_g000002 Rmu_sc0011314.1_g000006 Rmu_sc0011974.1_g000006 Rmu_sc0012179.1_g000009 Rmu_sc0015169.1_g000001 Rmu_sc0016368.1_g000002 Rmu_sc0022659.1_g000001 Rmu_sc0027371.1_g000001 Rmu_sc0028213.1_g000001 Rmu_sc0034526.1_g000001 Rmu_sc0039366.1_g000002 Rmu_ssc0000050.1_g000084 Rmu_ssc0000050.1_g000088 Rmu_ssc0000167.1_g000017
rosa_roxburghii Rroxscaffold_1G00011340 Rroxscaffold_1G00025710 Rroxscaffold_1G00025870 Rroxscaffold_1G00026070 Rroxscaffold_1G00026170 Rroxscaffold_1G00026200 Rroxscaffold_1G00026270 Rroxscaffold_1G00050950 Rroxscaffold_1G00058900 Rroxscaffold_1G00060040 Rroxscaffold_1G00060060 Rroxscaffold_1G00060070 Rroxscaffold_1G00060080 Rroxscaffold_1G00060110 Rroxscaffold_1G00060120 Rroxscaffold_1G00060140 Rroxscaffold_1G00060170 Rroxscaffold_1G00060210 Rroxscaffold_1G00060220 Rroxscaffold_1G00060240 Rroxscaffold_1G00060250 Rroxscaffold_1G00060260 Rroxscaffold_1G00060300 Rroxscaffold_1G00060320 Rroxscaffold_1G00060330 Rroxscaffold_1G00060900 Rroxscaffold_1G00060920 Rroxscaffold_1G00073980 Rroxscaffold_2G00077560 Rroxscaffold_2G00077580 Rroxscaffold_2G00146990 Rroxscaffold_3G00236200 Rroxscaffold_3G00236210 Rroxscaffold_3G00236220 Rroxscaffold_4G00292760 Rroxscaffold_4G00315200 Rroxscaffold_4G00315240 Rroxscaffold_4G00326240 Rroxscaffold_4G00328980 Rroxscaffold_5G00341890 Rroxscaffold_7G00161350 Rroxscaffold_7G00174490 Rroxscaffold_7G00206550
rosa_rugosa Rorug01G0093000 Rorug01G0093100 Rorug01G0128800 Rorug01G0312000 Rorug01G0312000 Rorug02G0581100 Rorug03G0224600 Rorug05G0028500 Rorug05G0032700 Rorug05G0032800 Rorug05G0032900 Rorug05G0032900 Rorug05G0033000 Rorug05G0033100 Rorug05G0033300 Rorug05G0033400 Rorug05G0033900 Rorug05G0034900 Rorug05G0035000 Rorug05G0046900 Rorug05G0047500 Rorug05G0047500 Rorug05G0111600 Rorug05G0287900 Rorug05G0288700 Rorug05G0586900 Rorug06G0231700 Rorug06G0354300 Rorug06G0354400
rosa_samantha Rh1DG122200 Rh2DG686800 Rh5BG136600 Rh6AG344500 Rh6BG351900 Rh6CG359000 Rh6CG359100 Rh6CG387600 Rh6CG480500 Rh6DG344600 Rh6DG467400
rosa_wichuraiana Rw0G010250 Rw0G014820 Rw0G021400 Rw0G023100 Rw1G009450 Rw1G012100 Rw1G012180 Rw1G028360 Rw2G054260 Rw3G024370 Rw3G024420 Rw3G024470 Rw5G010850 Rw5G011010 Rw5G011020 Rw5G011050 Rw5G011080 Rw5G011120 Rw5G012300 Rw5G018470 Rw5G033830 Rw6G008930 Rw6G030070

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 429
Acc36I ACCTGC 1 cut(s) 429
AciI CCGC 1 cut(s) 195
AfaI GTAC 1 cut(s) 230
AfiI CCNNNNNNNGG 4 cut(s) 168, 457, 458, 596
AgsI TTSAA 1 cut(s) 555
AjnI CCWGG 3 cut(s) 490, 517, 595
AjuI GAANNNNNNNTTGG 2 cut(s) 23, 55
AleI CACNNNNGTG 1 cut(s) 519
AloI GAACNNNNNNTCC 2 cut(s) 143, 175
AluBI AGCT 4 cut(s) 270, 328, 346, 401
AluI AGCT 4 cut(s) 270, 328, 346, 401
AoxI GGCC 1 cut(s) 292
ApeKI GCWGC 1 cut(s) 267
Asp700I GAANNNNTTC 2 cut(s) 345, 416
AspLEI GCGC 1 cut(s) 167
AsuC2I CCSGG 1 cut(s) 109
BbvI GCAGC 1 cut(s) 279
BceAI ACGGC 2 cut(s) 32, 444
BciT130I CCWGG 3 cut(s) 492, 519, 597
BcnI CCSGG 1 cut(s) 109
BfmI CTRYAG 1 cut(s) 265
BfoI RGCGCY 1 cut(s) 168
BfuAI ACCTGC 1 cut(s) 429
BisI GCNGC 1 cut(s) 268
BlsI GCNGC 1 cut(s) 269
Bme1390I CCNGG 4 cut(s) 109, 492, 519, 597
BmrFI CCNGG 4 cut(s) 109, 492, 519, 597
BpmI CTGGAG 2 cut(s) 7, 579
BpuMI CCSGG 1 cut(s) 109
BsaJI CCNNGG 2 cut(s) 85, 517
BsaXI ACNNNNNCTCC 6 cut(s) 5, 35, 143, 173, 577, 607
Bsc4I CCNNNNNNNGG 4 cut(s) 168, 457, 458, 596
Bse118I RCCGGY 1 cut(s) 480
Bse1I ACTGG 2 cut(s) 24, 295
BseBI CCWGG 3 cut(s) 492, 519, 597
BseDI CCNNGG 2 cut(s) 85, 517
BseGI GGATG 1 cut(s) 186
BseLI CCNNNNNNNGG 4 cut(s) 168, 457, 458, 596
BseNI ACTGG 2 cut(s) 24, 295
BseRI GAGGAG 2 cut(s) 102, 105
BseXI GCAGC 1 cut(s) 279
BseYI CCCAGC 1 cut(s) 167
BsgI GTGCAG 1 cut(s) 565
BshFI GGCC 1 cut(s) 294
BsiSI CCGG 3 cut(s) 108, 162, 481
BslI CCNNNNNNNGG 4 cut(s) 168, 457, 458, 596
BsnI GGCC 1 cut(s) 294
Bsp143I GATC 1 cut(s) 18
BspACI CCGC 1 cut(s) 195
BspANI GGCC 1 cut(s) 294
BspMAI CTGCAG 1 cut(s) 269
BspMI ACCTGC 1 cut(s) 429
BsrFI RCCGGY 1 cut(s) 480
BsrI ACTGG 2 cut(s) 24, 295
BssAI RCCGGY 1 cut(s) 480
BssECI CCNNGG 2 cut(s) 85, 517
BssMI GATC 1 cut(s) 18
Bst2UI CCWGG 3 cut(s) 492, 519, 597
Bst4CI ACNGT 1 cut(s) 576
Bst6I CTCTTC 2 cut(s) 12, 90
BstC8I GCNNGC 1 cut(s) 488
BstF5I GGATG 1 cut(s) 186
BstH2I RGCGCY 1 cut(s) 168
BstHHI GCGC 1 cut(s) 167
BstKTI GATC 1 cut(s) 21
BstMBI GATC 1 cut(s) 18
BstNI CCWGG 3 cut(s) 492, 519, 597
BstSCI CCNGG 4 cut(s) 107, 490, 517, 595
BstSFI CTRYAG 1 cut(s) 265
BstV1I GCAGC 1 cut(s) 279
BstXI CCANNNNNNTGG 1 cut(s) 521
BsuRI GGCC 1 cut(s) 294
BtsCI GGATG 1 cut(s) 186
BtsIMutI CAGTG 1 cut(s) 336
BveI ACCTGC 1 cut(s) 429
Cac8I GCNNGC 1 cut(s) 488
CfoI GCGC 1 cut(s) 167
Cfr10I RCCGGY 1 cut(s) 480
CseI GACGC 1 cut(s) 433
Csp6I GTAC 1 cut(s) 229
CviJI RGCY 9 cut(s) 81, 132, 270, 294, 328, 346, 401, 431, 551
CviKI_1 RGCY 9 cut(s) 81, 132, 270, 294, 328, 346, 401, 431, 551
CviQI GTAC 1 cut(s) 229
DpnI GATC 1 cut(s) 20
DpnII GATC 1 cut(s) 18
DraI TTTAAA 1 cut(s) 322
Eam1104I CTCTTC 2 cut(s) 12, 90
EarI CTCTTC 2 cut(s) 12, 90
EcoRII CCWGG 3 cut(s) 490, 517, 595
FaiI YATR 7 cut(s) 45, 74, 116, 124, 422, 424, 498
FauNDI CATATG 1 cut(s) 422
Fnu4HI GCNGC 1 cut(s) 268
FokI GGATG 1 cut(s) 173
Fsp4HI GCNGC 1 cut(s) 268
GlaI GCGC 1 cut(s) 166
GluI GCNGC 1 cut(s) 268
GsaI CCCAGC 1 cut(s) 171
GsuI CTGGAG 2 cut(s) 7, 579
HaeII RGCGCY 1 cut(s) 168
HaeIII GGCC 1 cut(s) 294
HapII CCGG 3 cut(s) 108, 162, 481
HgaI GACGC 1 cut(s) 433
HhaI GCGC 1 cut(s) 167
Hin6I GCGC 1 cut(s) 165
HinP1I GCGC 1 cut(s) 165
HincII GTYRAC 1 cut(s) 448
HindII GTYRAC 1 cut(s) 448
HindIII AAGCTT 1 cut(s) 344
HpaII CCGG 3 cut(s) 108, 162, 481
Hpy166II GTNNAC 1 cut(s) 448
Hpy188I TCNGA 1 cut(s) 86
Hpy8I GTNNAC 1 cut(s) 448
Hpy99I CGWCG 2 cut(s) 146, 214
HpyAV CCTTC 3 cut(s) 370, 406, 494
HpyCH4III ACNGT 1 cut(s) 576
HpyCH4IV ACGT 3 cut(s) 60, 141, 209
HpyCH4V TGCA 6 cut(s) 68, 114, 126, 267, 426, 546
HpySE526I ACGT 3 cut(s) 60, 141, 209
HspAI GCGC 1 cut(s) 165
Kzo9I GATC 1 cut(s) 18
LmnI GCTCC 1 cut(s) 164
Lsp1109I GCAGC 1 cut(s) 279
MaeII ACGT 3 cut(s) 60, 141, 209
MaeIII GTNAC 2 cut(s) 56, 470
MalI GATC 1 cut(s) 20
MboI GATC 1 cut(s) 18
MboII GAAGA 1 cut(s) 107
MfeI CAATTG 1 cut(s) 369
MluCI AATT 5 cut(s) 69, 238, 301, 361, 369
MnlI CCTC 5 cut(s) 15, 80, 83, 402, 603
MroXI GAANNNNTTC 2 cut(s) 345, 416
MseI TTAA 5 cut(s) 258, 300, 321, 360, 581
MslI CAYNNNNRTG 1 cut(s) 519
MspI CCGG 3 cut(s) 108, 162, 481
MspR9I CCNGG 4 cut(s) 109, 492, 519, 597
MunI CAATTG 1 cut(s) 369
MvaI CCWGG 3 cut(s) 492, 519, 597
NciI CCSGG 1 cut(s) 109
NdeI CATATG 1 cut(s) 422
NdeII GATC 1 cut(s) 18
NmuCI GTSAC 1 cut(s) 56
OliI CACNNNNGTG 1 cut(s) 519
PaqCI CACCTGC 1 cut(s) 429
PdmI GAANNNNTTC 2 cut(s) 345, 416
PflFI GACNNNGTC 1 cut(s) 140
PfoI TCCNGGA 1 cut(s) 595
PkrI GCNGC 1 cut(s) 269
Psp6I CCWGG 3 cut(s) 490, 517, 595
PspFI CCCAGC 1 cut(s) 167
PspGI CCWGG 3 cut(s) 490, 517, 595
PstI CTGCAG 1 cut(s) 269
PsyI GACNNNGTC 1 cut(s) 140
RsaI GTAC 1 cut(s) 230
RsaNI GTAC 1 cut(s) 229
RseI CAYNNNNRTG 1 cut(s) 519
SaqAI TTAA 5 cut(s) 258, 300, 321, 360, 581
SatI GCNGC 1 cut(s) 268
Sau3AI GATC 1 cut(s) 18
ScrFI CCNGG 4 cut(s) 109, 492, 519, 597
SfcI CTRYAG 1 cut(s) 265
SmiMI CAYNNNNRTG 1 cut(s) 519
Sse9I AATT 5 cut(s) 69, 238, 301, 361, 369
SsiI CCGC 1 cut(s) 195
StyD4I CCNGG 4 cut(s) 107, 490, 517, 595
TaaI ACNGT 1 cut(s) 576
TaiI ACGT 3 cut(s) 63, 144, 212
TaqI TCGA 1 cut(s) 144
TaqII GACCGA 1 cut(s) 202
TasI AATT 5 cut(s) 69, 238, 301, 361, 369
Tru1I TTAA 5 cut(s) 258, 300, 321, 360, 581
Tru9I TTAA 5 cut(s) 258, 300, 321, 360, 581
TscAI CASTG 1 cut(s) 343
TseFI GTSAC 1 cut(s) 56
TseI GCWGC 1 cut(s) 267
Tsp45I GTSAC 1 cut(s) 56
TspDTI ATGAA 3 cut(s) 409, 411, 513
TspGWI ACGGA 2 cut(s) 109, 585
TspRI CASTG 1 cut(s) 343
Tth111I GACNNNGTC 1 cut(s) 140
XmnI GAANNNNTTC 2 cut(s) 345, 416
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.