RchiOBHm_Chr2g0174541

Wall-associated receptor kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
OG0000066
Physical Location & Seq
Forward (+)
87096717 .. 87098776
2060 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ54169

Sequence Viewer

Length: 1392 bp
ATGATGGTGCAAAGACTCCACCCAAAACGTTGCCGCAGCAGCAGCATAGCAGAAACCATAGCCGACATCGAAGAACTCCTTACCGAAATCCTTGTGCATGTGCCAGCTAAACCACTGGTCCGCTTCAAATGCGTCTCCAAGCATTGGCTCTCTCTTATTTCCGACCCTAAATTCTGTCACCGCCACACCCTTCAAAACCCAAACACTCCCATCTGCGCCGTCTTCTGTGACACATCCCACCACCCCTTTCGTTTCATCCCTCTTGATGATCATGATCACATGATTCACATGCGTGGAACTAGTACTATCTTTGTTGGCATCTTTGTTCTGCTGTTTGGAATTTGGTTGATACGTCGTGCAAAGATGAAAAGAATGAAGGGCAGCAAACTCAGGCAGAAGTACTTTAGTCACAAAGAGGATATATTGTTACAACATCAATTGGCCAATCATGAGGCATATGCTGAGAGAAGAATGAAAATCTTTACTTTCAAAGAACTTCAGAAGGCAACAAATAATTTCGATCCCCATAAGAAAATTGGTCAAGGAGTTCTTGGATCAGTTTACCAAGGATACTGCCAGATAAAACAGTGGCTCTTAGGCTGTTGTTTACAGACACGCAAGCCTTTACTGGTTTACGAGTACTTCTCCAATATTGGCACTCTTTATAACCACACATATGGGAGAGAATCATCACCATTTTCATTGCAACTGCGAATGAAAATAGCTGTAGAAACCGCAGCTGCACTGGCATACTTGCACTCCTCCACTTCCAAGCCCGTAATCATACACAAAAACGTGAAGACAATGAACATACTATTAGATGATAAATACATAGTAAAACTGACAGACTCCGGATTTTCACCACTCCGGGGGTGCATTAAAATGCAAAGGACACTCGGATACATAGAACCTGAATGTCTTCATTCAAACACATTAATAGGAAAAAGCGACGTGTACAGCTTTGGAGTTGTCTTAGCGGAGCTAATAACAAGCAGGAGGGCAGCTACTCCCCATAGGCCTGAGGCAGAAAGAAGCCTGGCATATGTCTTTGCTAGGGCAATTGAGGGCGACATCGGGGACTTGCATGAAATTCTGGATGAAAAAATTCTTGTGGGAGACATAGAAATGGTGGAAAAAGTGGCAGATTTGGCATATAGATGCATAAGGGAAAGAGGGGAGGAAAGACCTTCCATGAAAGAAGTAGCCATGGAAGTACTTGAGGCATTGCGAATTATGGCCAAGCATCCAGAGGGCATGCTTAGTTTCTCTGAGTCTCCCGAAAGGACTGAGCACTTTGTTACACCACCTTCAAACGCTTACGTTGTTGATGTTAGAGGTGAAGGCTTTGATGGTGGCTCTAGCTTAAGGTTAATAAAAAACTTGACTTTATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
GUB_WAK_bind Pkinase Pkinase_Tyr WAK

Protein Analysis

463

Amino Acids

52.92

Weight (kDa)

9.02

Isoelectric Point (pI)

45.74

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 24 - 60 3e-07 F-box domain
PK_Tyr_Ser-Thr PF07714 198 - 403 7.9e-22 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 200 - 402 2.8e-19 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000066)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G21210 AT1G21230 AT1G21240 AT1G21240 AT1G21245 AT1G21250 AT1G21270 AT1G22720 AT3G25490
fragaria_vesca FvH4_2g35051 FvH4_2g35051 FvH4_2g35060 FvH4_3g10281 FvH4_3g10285 FvH4_3g10286 FvH4_3g10311 FvH4_3g10311 FvH4_3g10320 FvH4_3g10332 FvH4_3g10340 FvH4_3g10350 FvH4_3g10360 FvH4_3g10390 FvH4_3g10412 FvH4_3g10413 FvH4_3g10461 FvH4_3g10462 FvH4_3g10470 FvH4_3g10510 FvH4_3g10520 FvH4_3g10530 FvH4_3g10550 FvH4_3g10560 FvH4_3g10611 FvH4_3g11730 FvH4_6g53140 FvH4_6g53142 FvH4_7g31880 FvH4_7g31910 FvH4_7g31920
malus_domestica MD05G1269900.v1.1 MD05G1270000.v1.1 MD05G1270200.v1.1 MD05G1270400.v1.1 MD05G1270500.v1.1 MD05G1270600.v1.1 MD05G1270800.v1.1 MD05G1270900.v1.1 MD07G1183800.v1.1 MD08G1107600.v1.1 MD10G1248500.v1.1 MD10G1249200.v1.1 MD10G1249500.v1.1 MD10G1250000.v1.1 MD10G1250500.v1.1 MD10G1250900.v1.1 MD10G1251200.v1.1 MD10G1251400.v1.1 MD13G1004600.v1.1 MD15G1088400.v1.1
prunus_persica Prupe.1G442400_v2.0.a1 Prupe.1G442500_v2.0.a1 Prupe.2G223400_v2.0.a1 Prupe.4G091900_v2.0.a1 Prupe.4G093200_v2.0.a1 Prupe.4G093300_v2.0.a1 Prupe.4G093400_v2.0.a1 Prupe.4G093500_v2.0.a1 Prupe.4G094100_v2.0.a1 Prupe.4G094200_v2.0.a1 Prupe.4G094300_v2.0.a1 Prupe.6G358300_v2.0.a1
pyrus_communis pycom08g08990 pycom10g20660 pycom10g20670 pycom10g20680 pycom10g20710 pycom10g20740 pycom13g00400 pycom15g08290
rosa_chinensis RchiOBHm_Chr1g0326861 RchiOBHm_Chr1g0326871 RchiOBHm_Chr1g0331391 RchiOBHm_Chr1g0336911 RchiOBHm_Chr1g0364001 RchiOBHm_Chr2g0174541 RchiOBHm_Chr2g0175041 RchiOBHm_Chr2g0175101 RchiOBHm_Chr2g0175121 RchiOBHm_Chr3g0486331 RchiOBHm_Chr5g0015581 RchiOBHm_Chr5g0016551 RchiOBHm_Chr5g0016561 RchiOBHm_Chr5g0016581 RchiOBHm_Chr5g0016601 RchiOBHm_Chr5g0016611 RchiOBHm_Chr5g0016641 RchiOBHm_Chr5g0016661 RchiOBHm_Chr5g0016691 RchiOBHm_Chr5g0016701 RchiOBHm_Chr5g0016731 RchiOBHm_Chr5g0016741 RchiOBHm_Chr5g0016811 RchiOBHm_Chr5g0016841 RchiOBHm_Chr5g0016871 RchiOBHm_Chr5g0016881 RchiOBHm_Chr5g0016931 RchiOBHm_Chr5g0017021 RchiOBHm_Chr5g0017041 RchiOBHm_Chr5g0017071 RchiOBHm_Chr5g0017091 RchiOBHm_Chr5g0017121 RchiOBHm_Chr5g0017141 RchiOBHm_Chr5g0017291 RchiOBHm_Chr5g0017321 RchiOBHm_Chr5g0017401 RchiOBHm_Chr5g0019001 RchiOBHm_Chr5g0019071 RchiOBHm_Chr5g0028941 RchiOBHm_Chr5g0052141 RchiOBHm_Chr5g0054721 RchiOBHm_Chr5g0054801 RchiOBHm_Chr5g0054931 RchiOBHm_Chr5g0054941 RchiOBHm_Chr6g0259291 RchiOBHm_Chr6g0292991 RchiOBHm_Chr6g0306911
rosa_laevigata RLG00000009465 RLG00000009468 RLG00000010755 RLG00000011976 RLG00000014541 RLG00000014542 RLG00000015169 RLG00000022308 RLG00000027529 RLG00000029324 RLG00000030244 RLG00000030245 RLG00000032210 RLG00000032211 RLG00000032257 RLG00000032259 RLG00000032260 RLG00000032261 RLG00000032262 RLG00000032268 RLG00000032269 RLG00000032272 RLG00000032282 RLG00000032283 RLG00000032308 RLG00000032413 RLG00000033129 RLG00000034945
rosa_multiflora Rmu_co8241929.1_g000001 Rmu_co8269227.1_g000001 Rmu_co8461259.1_g000001 Rmu_co8495385.1_g000001 Rmu_sc0000028.1_g000003 Rmu_sc0000083.1_g000009 Rmu_sc0000083.1_g000010 Rmu_sc0000083.1_g000031 Rmu_sc0000083.1_g000043 Rmu_sc0000083.1_g000046 Rmu_sc0000083.1_g000047 Rmu_sc0000563.1_g000024 Rmu_sc0000842.1_g000012 Rmu_sc0001235.1_g000001 Rmu_sc0001235.1_g000005 Rmu_sc0001235.1_g000009 Rmu_sc0001235.1_g000015 Rmu_sc0001235.1_g000016 Rmu_sc0001235.1_g000017 Rmu_sc0001473.1_g000036 Rmu_sc0001607.1_g000016 Rmu_sc0001788.1_g000006 Rmu_sc0002018.1_g000008 Rmu_sc0002028.1_g000001 Rmu_sc0002680.1_g000011 Rmu_sc0002798.1_g000023 Rmu_sc0002886.1_g000023 Rmu_sc0002989.1_g000012 Rmu_sc0003064.1_g000009 Rmu_sc0003382.1_g000006 Rmu_sc0003630.1_g000002 Rmu_sc0003630.1_g000047 Rmu_sc0003630.1_g000066 Rmu_sc0003630.1_g000067 Rmu_sc0003649.1_g000010 Rmu_sc0003688.1_g000005 Rmu_sc0003920.1_g000007 Rmu_sc0004765.1_g000007 Rmu_sc0004765.1_g000008 Rmu_sc0004920.1_g000011 Rmu_sc0005223.1_g000008 Rmu_sc0005223.1_g000010 Rmu_sc0005223.1_g000015 Rmu_sc0005223.1_g000016 Rmu_sc0005319.1_g000014 Rmu_sc0005319.1_g000015 Rmu_sc0005319.1_g000018 Rmu_sc0005319.1_g000019 Rmu_sc0005319.1_g000025 Rmu_sc0005418.1_g000007 Rmu_sc0005418.1_g000012 Rmu_sc0006106.1_g000011 Rmu_sc0006914.1_g000012 Rmu_sc0007023.1_g000001 Rmu_sc0007662.1_g000001 Rmu_sc0007920.1_g000002 Rmu_sc0007920.1_g000013 Rmu_sc0008053.1_g000016 Rmu_sc0008053.1_g000017 Rmu_sc0008053.1_g000018 Rmu_sc0008053.1_g000023 Rmu_sc0008053.1_g000050 Rmu_sc0009042.1_g000007 Rmu_sc0009042.1_g000008 Rmu_sc0010642.1_g000008 Rmu_sc0011109.1_g000002 Rmu_sc0011314.1_g000006 Rmu_sc0011974.1_g000006 Rmu_sc0012179.1_g000009 Rmu_sc0015169.1_g000001 Rmu_sc0016368.1_g000002 Rmu_sc0022659.1_g000001 Rmu_sc0027371.1_g000001 Rmu_sc0028213.1_g000001 Rmu_sc0034526.1_g000001 Rmu_sc0039366.1_g000002 Rmu_ssc0000050.1_g000084 Rmu_ssc0000050.1_g000088 Rmu_ssc0000167.1_g000017
rosa_roxburghii Rroxscaffold_1G00011340 Rroxscaffold_1G00025710 Rroxscaffold_1G00025870 Rroxscaffold_1G00026070 Rroxscaffold_1G00026170 Rroxscaffold_1G00026200 Rroxscaffold_1G00026270 Rroxscaffold_1G00050950 Rroxscaffold_1G00058900 Rroxscaffold_1G00060040 Rroxscaffold_1G00060060 Rroxscaffold_1G00060070 Rroxscaffold_1G00060080 Rroxscaffold_1G00060110 Rroxscaffold_1G00060120 Rroxscaffold_1G00060140 Rroxscaffold_1G00060170 Rroxscaffold_1G00060210 Rroxscaffold_1G00060220 Rroxscaffold_1G00060240 Rroxscaffold_1G00060250 Rroxscaffold_1G00060260 Rroxscaffold_1G00060300 Rroxscaffold_1G00060320 Rroxscaffold_1G00060330 Rroxscaffold_1G00060900 Rroxscaffold_1G00060920 Rroxscaffold_1G00073980 Rroxscaffold_2G00077560 Rroxscaffold_2G00077580 Rroxscaffold_2G00146990 Rroxscaffold_3G00236200 Rroxscaffold_3G00236210 Rroxscaffold_3G00236220 Rroxscaffold_4G00292760 Rroxscaffold_4G00315200 Rroxscaffold_4G00315240 Rroxscaffold_4G00326240 Rroxscaffold_4G00328980 Rroxscaffold_5G00341890 Rroxscaffold_7G00161350 Rroxscaffold_7G00174490 Rroxscaffold_7G00206550
rosa_rugosa Rorug01G0093000 Rorug01G0093100 Rorug01G0128800 Rorug01G0312000 Rorug01G0312000 Rorug02G0581100 Rorug03G0224600 Rorug05G0028500 Rorug05G0032700 Rorug05G0032800 Rorug05G0032900 Rorug05G0032900 Rorug05G0033000 Rorug05G0033100 Rorug05G0033300 Rorug05G0033400 Rorug05G0033900 Rorug05G0034900 Rorug05G0035000 Rorug05G0046900 Rorug05G0047500 Rorug05G0047500 Rorug05G0111600 Rorug05G0287900 Rorug05G0288700 Rorug05G0586900 Rorug06G0231700 Rorug06G0354300 Rorug06G0354400
rosa_samantha Rh1DG122200 Rh2DG686800 Rh5BG136600 Rh6AG344500 Rh6BG351900 Rh6CG359000 Rh6CG359100 Rh6CG387600 Rh6CG480500 Rh6DG344600 Rh6DG467400
rosa_wichuraiana Rw0G010250 Rw0G014820 Rw0G021400 Rw0G023100 Rw1G009450 Rw1G012100 Rw1G012180 Rw1G028360 Rw2G054260 Rw3G024370 Rw3G024420 Rw3G024470 Rw5G010850 Rw5G011010 Rw5G011020 Rw5G011050 Rw5G011080 Rw5G011120 Rw5G012300 Rw5G018470 Rw5G033830 Rw6G008930 Rw6G030070

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 666
AccB7I CCANNNNNTGG 1 cut(s) 144
AccIII TCCGGA 1 cut(s) 851
AciI CCGC 5 cut(s) 34, 121, 181, 735, 977
AclI AACGTT 1 cut(s) 28
AclWI GGATC 2 cut(s) 515, 562
AcoI YGGCCR 2 cut(s) 441, 1236
AcsI RAATTY 4 cut(s) 170, 339, 1089, 1104
AcuI CTGAAG 1 cut(s) 482
AfaI GTAC 5 cut(s) 304, 401, 641, 956, 1215
AfiI CCNNNNNNNGG 2 cut(s) 144, 869
AflII CTTAAG 1 cut(s) 1363
AflIII ACRYGT 1 cut(s) 951
AgsI TTSAA 5 cut(s) 127, 194, 490, 927, 1311
AhlI ACTAGT 1 cut(s) 299
AjiI CACGTC 1 cut(s) 952
AjnI CCWGG 1 cut(s) 1035
AleI CACNNNNGTG 1 cut(s) 291
AluBI AGCT 7 cut(s) 107, 725, 740, 960, 982, 1004, 1362
AluI AGCT 7 cut(s) 107, 725, 740, 960, 982, 1004, 1362
Alw21I GWGCWC 1 cut(s) 1293
Alw26I GTCTC 3 cut(s) 139, 1110, 1278
AlwI GGATC 2 cut(s) 515, 562
Aor13HI TCCGGA 1 cut(s) 851
AoxI GGCC 3 cut(s) 441, 1016, 1236
ApeKI GCWGC 7 cut(s) 36, 39, 42, 381, 737, 740, 1001
ApoI RAATTY 4 cut(s) 170, 339, 1089, 1104
AseI ATTAAT 1 cut(s) 935
Asp700I GAANNNNTTC 2 cut(s) 918, 1104
AspLEI GCGC 1 cut(s) 218
AspS9I GGNCC 1 cut(s) 118
AsuC2I CCSGG 1 cut(s) 869
AsuHPI GGTGA 4 cut(s) 170, 684, 852, 1349
AvaII GGWCC 1 cut(s) 118
AxyI CCTNAGG 1 cut(s) 1020
BalI TGGCCA 2 cut(s) 443, 1238
BbsI GAAGAC 3 cut(s) 214, 806, 911
Bbv12I GWGCWC 1 cut(s) 1293
BbvI GCAGC 7 cut(s) 48, 51, 54, 393, 727, 749, 1013
BccI CCATC 2 cut(s) 218, 1343
BceAI ACGGC 1 cut(s) 203
BciT130I CCWGG 1 cut(s) 1037
BciVI GTATCC 2 cut(s) 563, 893
BclI TGATCA 2 cut(s) 268, 274
BcnI CCSGG 1 cut(s) 869
BcoDI GTCTC 3 cut(s) 139, 1110, 1278
BcuI ACTAGT 1 cut(s) 299
BfaI CTAG 3 cut(s) 300, 1053, 1359
BfmI CTRYAG 1 cut(s) 726
BfrI CTTAAG 1 cut(s) 1363
BfuI GTATCC 2 cut(s) 563, 893
BisI GCNGC 8 cut(s) 34, 37, 40, 43, 382, 738, 741, 1002
BlsI GCNGC 8 cut(s) 35, 38, 41, 44, 383, 739, 742, 1003
BmcAI AGTACT 4 cut(s) 304, 401, 641, 1215
Bme1390I CCNGG 2 cut(s) 869, 1037
Bme18I GGWCC 1 cut(s) 118
BmgBI CACGTC 1 cut(s) 952
BmgT120I GGNCC 1 cut(s) 118
BmrFI CCNGG 2 cut(s) 869, 1037
BmsI GCATC 3 cut(s) 327, 1148, 1252
BpiI GAAGAC 3 cut(s) 214, 806, 911
BplI GAGNNNNNCTC 2 cut(s) 629, 661
BpuEI CTTGAG 1 cut(s) 1238
BpuMI CCSGG 1 cut(s) 869
BsaBI GATNNNNATC 1 cut(s) 273
BsaJI CCNNGG 3 cut(s) 565, 868, 1206
BsaWI WCCGGW 1 cut(s) 851
BsaXI ACNNNNNCTCC 2 cut(s) 743, 773
Bsc4I CCNNNNNNNGG 2 cut(s) 144, 869
Bse1I ACTGG 3 cut(s) 120, 633, 750
Bse21I CCTNAGG 1 cut(s) 1020
Bse3DI GCAATG 2 cut(s) 701, 1223
Bse8I GATNNNNATC 1 cut(s) 273
BseAI TCCGGA 1 cut(s) 851
BseBI CCWGG 1 cut(s) 1037
BseDI CCNNGG 3 cut(s) 565, 868, 1206
BseGI GGATG 4 cut(s) 233, 255, 1102, 1243
BseJI GATNNNNATC 1 cut(s) 273
BseLI CCNNNNNNNGG 2 cut(s) 144, 869
BseMI GCAATG 2 cut(s) 701, 1223
BseMII CTCAG 5 cut(s) 403, 453, 1011, 1260, 1278
BseNI ACTGG 3 cut(s) 120, 633, 750
BseRI GAGGAG 1 cut(s) 751
BseXI GCAGC 7 cut(s) 48, 51, 54, 393, 727, 749, 1013
BsgI GTGCAG 1 cut(s) 726
BshFI GGCC 3 cut(s) 443, 1018, 1238
BsiHKAI GWGCWC 1 cut(s) 1293
BsiSI CCGG 2 cut(s) 852, 868
BslFI GGGAC 1 cut(s) 1091
BslI CCNNNNNNNGG 2 cut(s) 144, 869
BsmAI GTCTC 3 cut(s) 139, 1110, 1278
BsmBI CGTCTC 1 cut(s) 139
BsmFI GGGAC 1 cut(s) 1091
BsnI GGCC 3 cut(s) 443, 1018, 1238
Bsp1286I GDGCHC 1 cut(s) 1293
Bsp13I TCCGGA 1 cut(s) 851
Bsp1407I TGTACA 1 cut(s) 954
Bsp143I GATC 4 cut(s) 268, 274, 520, 554
Bsp19I CCATGG 1 cut(s) 1206
BspACI CCGC 5 cut(s) 34, 121, 181, 735, 977
BspANI GGCC 3 cut(s) 443, 1018, 1238
BspCNI CTCAG 5 cut(s) 402, 454, 1012, 1261, 1279
BspEI TCCGGA 1 cut(s) 851
BspHI TCATGA 2 cut(s) 271, 448
BspPI GGATC 2 cut(s) 515, 562
BspTI CTTAAG 1 cut(s) 1363
BsrDI GCAATG 2 cut(s) 701, 1223
BsrGI TGTACA 1 cut(s) 954
BsrI ACTGG 3 cut(s) 120, 633, 750
BssECI CCNNGG 3 cut(s) 565, 868, 1206
BssMI GATC 4 cut(s) 268, 274, 520, 554
BssT1I CCWWGG 2 cut(s) 565, 1206
Bst2UI CCWGG 1 cut(s) 1037
Bst4CI ACNGT 1 cut(s) 588
BstAFI CTTAAG 1 cut(s) 1363
BstAUI TGTACA 1 cut(s) 954
BstC8I GCNNGC 3 cut(s) 105, 620, 1256
BstDEI CTNAG 8 cut(s) 389, 462, 595, 973, 1020, 1259, 1269, 1287
BstDSI CCRYGG 1 cut(s) 1206
BstF5I GGATG 4 cut(s) 233, 255, 1102, 1243
BstHHI GCGC 1 cut(s) 218
BstKTI GATC 4 cut(s) 271, 277, 523, 557
BstMAI GTCTC 3 cut(s) 139, 1110, 1278
BstMBI GATC 4 cut(s) 268, 274, 520, 554
BstMWI GCNNNNNNNGC 5 cut(s) 39, 42, 129, 746, 1148
BstNI CCWGG 1 cut(s) 1037
BstNSI RCATGY 3 cut(s) 101, 292, 1258
BstSCI CCNGG 2 cut(s) 867, 1035
BstSFI CTRYAG 1 cut(s) 726
BstV1I GCAGC 7 cut(s) 48, 51, 54, 393, 727, 749, 1013
BstV2I GAAGAC 3 cut(s) 214, 806, 911
BstXI CCANNNNNNTGG 1 cut(s) 677
Bsu36I CCTNAGG 1 cut(s) 1020
BsuI GTATCC 2 cut(s) 563, 893
BsuRI GGCC 3 cut(s) 443, 1018, 1238
BtgI CCRYGG 1 cut(s) 1206
BtrI CACGTC 1 cut(s) 952
BtsCI GGATG 4 cut(s) 233, 255, 1102, 1243
BtsIMutI CAGTG 3 cut(s) 113, 593, 743
Cac8I GCNNGC 3 cut(s) 105, 620, 1256
CciI TCATGA 2 cut(s) 271, 448
CfoI GCGC 1 cut(s) 218
Cfr13I GGNCC 1 cut(s) 118
CseI GACGC 1 cut(s) 121
Csp6I GTAC 5 cut(s) 303, 400, 640, 955, 1214
CviAII CATG 9 cut(s) 98, 272, 280, 289, 449, 1085, 1192, 1207, 1255
CviQI GTAC 5 cut(s) 303, 400, 640, 955, 1214
DdeI CTNAG 8 cut(s) 389, 462, 595, 973, 1020, 1259, 1269, 1287
DpnI GATC 4 cut(s) 270, 276, 522, 556
DpnII GATC 4 cut(s) 268, 274, 520, 554
EaeI YGGCCR 2 cut(s) 441, 1236
Eco130I CCWWGG 2 cut(s) 565, 1206
Eco147I AGGCCT 1 cut(s) 1018
Eco47I GGWCC 1 cut(s) 118
Eco57I CTGAAG 1 cut(s) 482
Eco81I CCTNAGG 1 cut(s) 1020
EcoRII CCWGG 1 cut(s) 1035
EcoT14I CCWWGG 2 cut(s) 565, 1206
EcoT22I ATGCAT 1 cut(s) 1163
ErhI CCWWGG 2 cut(s) 565, 1206
Esp3I CGTCTC 1 cut(s) 139
FaeI CATG 9 cut(s) 101, 275, 283, 292, 452, 1088, 1195, 1210, 1258
FalI AAGNNNNNCTT 4 cut(s) 63, 95, 534, 566
FaqI GGGAC 1 cut(s) 1091
FatI CATG 9 cut(s) 97, 271, 279, 288, 448, 1084, 1191, 1206, 1254
FauNDI CATATG 3 cut(s) 457, 676, 1042
FbaI TGATCA 2 cut(s) 268, 274
Fnu4HI GCNGC 8 cut(s) 34, 37, 40, 43, 382, 738, 741, 1002
FokI GGATG 4 cut(s) 220, 242, 1109, 1230
Fsp4HI GCNGC 8 cut(s) 34, 37, 40, 43, 382, 738, 741, 1002
FspBI CTAG 3 cut(s) 300, 1053, 1359
GlaI GCGC 1 cut(s) 217
GluI GCNGC 8 cut(s) 34, 37, 40, 43, 382, 738, 741, 1002
HaeIII GGCC 3 cut(s) 443, 1018, 1238
HapII CCGG 2 cut(s) 852, 868
HgaI GACGC 1 cut(s) 121
HhaI GCGC 1 cut(s) 218
Hin1II CATG 9 cut(s) 101, 275, 283, 292, 452, 1088, 1195, 1210, 1258
Hin6I GCGC 1 cut(s) 216
HinP1I GCGC 1 cut(s) 216
HinfI GANTC 5 cut(s) 15, 283, 686, 848, 1271
HpaII CCGG 2 cut(s) 852, 868
HphI GGTGA 4 cut(s) 170, 684, 852, 1349
Hpy166II GTNNAC 4 cut(s) 562, 608, 634, 955
Hpy188I TCNGA 4 cut(s) 163, 501, 899, 1270
Hpy188III TCNNGA 7 cut(s) 263, 272, 449, 852, 1094, 1247, 1277
Hpy8I GTNNAC 4 cut(s) 562, 608, 634, 955
Hpy99I CGWCG 2 cut(s) 357, 953
HpyAV CCTTC 6 cut(s) 200, 370, 496, 1197, 1317, 1334
HpyCH4III ACNGT 1 cut(s) 588
HpyCH4IV ACGT 5 cut(s) 28, 352, 795, 951, 1320
HpyF10VI GCNNNNNNNGC 5 cut(s) 39, 42, 129, 746, 1148
HpyF3I CTNAG 8 cut(s) 389, 462, 595, 973, 1020, 1259, 1269, 1287
HpySE526I ACGT 5 cut(s) 28, 352, 795, 951, 1320
Hsp92II CATG 9 cut(s) 101, 275, 283, 292, 452, 1088, 1195, 1210, 1258
HspAI GCGC 1 cut(s) 216
Kpn2I TCCGGA 1 cut(s) 851
Ksp22I TGATCA 2 cut(s) 268, 274
Kzo9I GATC 4 cut(s) 268, 274, 520, 554
LmnI GCTCC 1 cut(s) 979
Lsp1109I GCAGC 7 cut(s) 48, 51, 54, 393, 727, 749, 1013
LweI GCATC 3 cut(s) 327, 1148, 1252
MaeI CTAG 3 cut(s) 300, 1053, 1359
MaeII ACGT 5 cut(s) 28, 352, 795, 951, 1320
MaeIII GTNAC 5 cut(s) 176, 227, 407, 426, 1297
MalI GATC 4 cut(s) 270, 276, 522, 556
MboI GATC 4 cut(s) 268, 274, 520, 554
MboII GAAGA 5 cut(s) 83, 214, 480, 811, 911
MfeI CAATTG 2 cut(s) 437, 1059
MhlI GDGCHC 1 cut(s) 1293
MlsI TGGCCA 2 cut(s) 443, 1238
MluCI AATT 9 cut(s) 170, 339, 437, 514, 534, 1059, 1089, 1104, 1230
MluNI TGGCCA 2 cut(s) 443, 1238
MlyI GAGTC 3 cut(s) 9, 842, 1280
MmeI TCCRAC 1 cut(s) 186
Mox20I TGGCCA 2 cut(s) 443, 1238
Mph1103I ATGCAT 1 cut(s) 1163
MroI TCCGGA 1 cut(s) 851
MroXI GAANNNNTTC 2 cut(s) 918, 1104
MscI TGGCCA 2 cut(s) 443, 1238
MseI TTAA 4 cut(s) 879, 935, 1364, 1370
MslI CAYNNNNRTG 5 cut(s) 291, 675, 881, 1124, 1156
Msp20I TGGCCA 2 cut(s) 443, 1238
MspA1I CMGCKG 1 cut(s) 740
MspCI CTTAAG 1 cut(s) 1363
MspI CCGG 2 cut(s) 852, 868
MspR9I CCNGG 2 cut(s) 869, 1037
MunI CAATTG 2 cut(s) 437, 1059
MvaI CCWGG 1 cut(s) 1037
MwoI GCNNNNNNNGC 5 cut(s) 39, 42, 129, 746, 1148
NciI CCSGG 1 cut(s) 869
NcoI CCATGG 1 cut(s) 1206
NdeI CATATG 3 cut(s) 457, 676, 1042
NdeII GATC 4 cut(s) 268, 274, 520, 554
NlaIII CATG 9 cut(s) 101, 275, 283, 292, 452, 1088, 1195, 1210, 1258
NmuCI GTSAC 3 cut(s) 176, 227, 407
NsiI ATGCAT 1 cut(s) 1163
NspI RCATGY 3 cut(s) 101, 292, 1258
OliI CACNNNNGTG 1 cut(s) 291
PaeI GCATGC 1 cut(s) 1258
PagI TCATGA 2 cut(s) 271, 448
PceI AGGCCT 1 cut(s) 1018
PdmI GAANNNNTTC 2 cut(s) 918, 1104
PfeI GAWTC 2 cut(s) 283, 686
PflMI CCANNNNNTGG 1 cut(s) 144
PkrI GCNGC 8 cut(s) 35, 38, 41, 44, 383, 739, 742, 1003
PleI GAGTC 3 cut(s) 9, 842, 1279
PpsI GAGTC 3 cut(s) 9, 842, 1279
PshBI ATTAAT 1 cut(s) 935
PsiI TTATAA 1 cut(s) 666
Psp1406I AACGTT 1 cut(s) 28
Psp6I CCWGG 1 cut(s) 1035
PspGI CCWGG 1 cut(s) 1035
PspPI GGNCC 1 cut(s) 118
PvuII CAGCTG 1 cut(s) 740
RsaI GTAC 5 cut(s) 304, 401, 641, 956, 1215
RsaNI GTAC 5 cut(s) 303, 400, 640, 955, 1214
RseI CAYNNNNRTG 5 cut(s) 291, 675, 881, 1124, 1156
SaqAI TTAA 4 cut(s) 879, 935, 1364, 1370
SatI GCNGC 8 cut(s) 34, 37, 40, 43, 382, 738, 741, 1002
Sau3AI GATC 4 cut(s) 268, 274, 520, 554
Sau96I GGNCC 1 cut(s) 118
ScaI AGTACT 4 cut(s) 304, 401, 641, 1215
SchI GAGTC 3 cut(s) 9, 842, 1280
ScrFI CCNGG 2 cut(s) 869, 1037
SduI GDGCHC 1 cut(s) 1293
SfaNI GCATC 3 cut(s) 327, 1148, 1252
SfcI CTRYAG 1 cut(s) 726
SinI GGWCC 1 cut(s) 118
SmiMI CAYNNNNRTG 5 cut(s) 291, 675, 881, 1124, 1156
SmlI CTYRAG 2 cut(s) 1217, 1363
SmoI CTYRAG 2 cut(s) 1217, 1363
SpeI ACTAGT 1 cut(s) 299
SphI GCATGC 1 cut(s) 1258
Sse9I AATT 9 cut(s) 170, 339, 437, 514, 534, 1059, 1089, 1104, 1230
SseBI AGGCCT 1 cut(s) 1018
SsiI CCGC 5 cut(s) 34, 121, 181, 735, 977
SspI AATATT 1 cut(s) 652
SspMI CTAG 3 cut(s) 300, 1053, 1359
StuI AGGCCT 1 cut(s) 1018
StyD4I CCNGG 2 cut(s) 867, 1035
StyI CCWWGG 2 cut(s) 565, 1206
TaaI ACNGT 1 cut(s) 588
TaiI ACGT 5 cut(s) 31, 355, 798, 954, 1323
TaqI TCGA 2 cut(s) 69, 519
TasI AATT 9 cut(s) 170, 339, 437, 514, 534, 1059, 1089, 1104, 1230
TatI WGTACW 5 cut(s) 302, 399, 639, 954, 1213
TauI GCSGC 1 cut(s) 36
TfiI GAWTC 2 cut(s) 283, 686
Tru1I TTAA 4 cut(s) 879, 935, 1364, 1370
Tru9I TTAA 4 cut(s) 879, 935, 1364, 1370
TscAI CASTG 3 cut(s) 120, 593, 750
TseFI GTSAC 3 cut(s) 176, 227, 407
TseI GCWGC 7 cut(s) 36, 39, 42, 381, 737, 740, 1001
Tsp45I GTSAC 3 cut(s) 176, 227, 407
TspRI CASTG 3 cut(s) 120, 593, 750
Van91I CCANNNNNTGG 1 cut(s) 144
Vha464I CTTAAG 1 cut(s) 1363
VpaK11BI GGWCC 1 cut(s) 118
VspI ATTAAT 1 cut(s) 935
XapI RAATTY 4 cut(s) 170, 339, 1089, 1104
XceI RCATGY 3 cut(s) 101, 292, 1258
XcmI CCANNNNNNNNNTGG 1 cut(s) 533
XmnI GAANNNNTTC 2 cut(s) 918, 1104
XspI CTAG 3 cut(s) 300, 1053, 1359
ZrmI AGTACT 4 cut(s) 304, 401, 641, 1215
Zsp2I ATGCAT 1 cut(s) 1163
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.