Rmu_sc0005319.1_g000014

Wall-associated receptor kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0005319.1
OG0000066
Physical Location & Seq
Forward (+)
65144 .. 67981
2838 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0005319.1_g000014.1.cds

Sequence Viewer

Length: 2268 bp
atgtcgatcatcgtcttgcaattcccattggcggcagtcctactcctgttatcgttggctagtactaccaaagcaacagctgctgctaaagccctgtccggctgctctgacaagtgcggcaatctcacaattccatatccatttggcatgaagaaggaatgcttcctgcaagaagaattctttatcaattgcaaccattcgacccaaccgccaacggcatatttgatggacggcaatgtagttgttactaacatatctcttgatgacggtgagttgcgaatattaaatttagtagctcgtgattgttacgatgcgcagggtccaactatcagcacccaggctagtctcaccctgcctcttccttatacgatctctgatgctaaaaacagattcattgccgttggttgtgacactaacacatttctcggaggcttcatcgaaaaccagccgttctacacaggatgctcgtccatatgctacagcctcgacagcgttgataataactcttgctccggtgttgggtgttgcgagactaaaatccccaacgggttgtacaatcagacggtgcagttgaatagctactacaaccattcgtatgtattgaagtttaacccctgcagctacgccttcgttgtggaacaaggccagttcaatttctcccctgcgagttttatagacctgaagaacaccaaaaggcttccgatggttcttaattgggcaattgggaatgacaaagactcttgtgatgaagctcaaaagacggagcagttcgcttgcaaggctaaaagcaggtgcttcaacaggcctgacaatgggtccataggttacttatgccaatgcttgcctggttacgaaggaaacccctaccatccagatggttgccaagatattgatgagtgcgaggttccaaacctctgccatcatggaaagtgctcaaattcacgaggaaattactcttgttcatgtcacaaaggatacaaacacgacggcaggaatgacaggatctgcatcaaaaaagtctcaaagatggaagtcctgcttattgtttcattgggtgcaagtgtgggcttcttggttttattccttggaatttcgtggatatgttggggaatgaagaaaagagacttcattaaactcaaagaaaagtacttcaaagagaatggtggcttattgttactgcaacaactcgctagtcatggaagctcgatgaagacaacaaaaatctttactgctgaagaacttgagaaggcaacaaacaactatcatgagagtagagtccttggagaaggaggttatggaacagtttacaaaggtatactgccggatgacacaatggttgccataaagaagtcgaaaggtggtgccctaacccagagtgatcagtttgttaacgaggtgattgtcctttctcaaatcaaccacaggaatgtggtaaagctattaggttgttgtttagaaacagaagcgcctttactagtatatgaattcattacccatggcactctttatgagcatattcataaaaaaggatcgtcactcccatttgaattacgaatgaagatagcaactcaaagcgcggaagcgctgtcccacttacactcctcaatttccacaccaataatacatcgagatgtgaaaacatcaaatattttgttagatgatgattatacggcaaaagtgtcagattttggagcttcccgattggttccttcaggtcaaactgatatacaaactttagtgcttgggacatttggatacctggaccctgaatatctgcaatcaaaccaactaacagaaaagagtgatgtttacagctttggagttgtcctagtggagctactaacaagcaaagtgccggtttctaaagatagatccttagcaagcatctttcttgcttccatggaagaagattggttgaatcaaattcttgatgatgacatagtgaatgaggaaaacattgagacggtaaagaaagtggccaatctggcaaaaagatgcttgagggtaaaaggggaggaaaggcctaccatgaaagaaattgcgaaagagttggaggaaatgagtgtcacggtaaaacatccatggggatttaatgctaatttttgcgaagaagagaatgaatacttgcttcgatcatttaattcagacgcttacgttgtgggtaatgaagaaggtgattgcagttctagtggtctaaccagtcgtacgaccactgcgtatgatagcatgcaaatcgaacagttaatgccacatgatggtggacgatag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
EGF_CA GUB_WAK_bind Pkinase Pkinase_Tyr WAK

Protein Analysis

755

Amino Acids

83.66

Weight (kDa)

5.54

Isoelectric Point (pI)

37.8

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000066)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G21210 AT1G21230 AT1G21240 AT1G21240 AT1G21245 AT1G21250 AT1G21270 AT1G22720 AT3G25490
fragaria_vesca FvH4_2g35051 FvH4_2g35051 FvH4_2g35060 FvH4_3g10281 FvH4_3g10285 FvH4_3g10286 FvH4_3g10311 FvH4_3g10311 FvH4_3g10320 FvH4_3g10332 FvH4_3g10340 FvH4_3g10350 FvH4_3g10360 FvH4_3g10390 FvH4_3g10412 FvH4_3g10413 FvH4_3g10461 FvH4_3g10462 FvH4_3g10470 FvH4_3g10510 FvH4_3g10520 FvH4_3g10530 FvH4_3g10550 FvH4_3g10560 FvH4_3g10611 FvH4_3g11730 FvH4_6g53140 FvH4_6g53142 FvH4_7g31880 FvH4_7g31910 FvH4_7g31920
malus_domestica MD05G1269900.v1.1 MD05G1270000.v1.1 MD05G1270200.v1.1 MD05G1270400.v1.1 MD05G1270500.v1.1 MD05G1270600.v1.1 MD05G1270800.v1.1 MD05G1270900.v1.1 MD07G1183800.v1.1 MD08G1107600.v1.1 MD10G1248500.v1.1 MD10G1249200.v1.1 MD10G1249500.v1.1 MD10G1250000.v1.1 MD10G1250500.v1.1 MD10G1250900.v1.1 MD10G1251200.v1.1 MD10G1251400.v1.1 MD13G1004600.v1.1 MD15G1088400.v1.1
prunus_persica Prupe.1G442400_v2.0.a1 Prupe.1G442500_v2.0.a1 Prupe.2G223400_v2.0.a1 Prupe.4G091900_v2.0.a1 Prupe.4G093200_v2.0.a1 Prupe.4G093300_v2.0.a1 Prupe.4G093400_v2.0.a1 Prupe.4G093500_v2.0.a1 Prupe.4G094100_v2.0.a1 Prupe.4G094200_v2.0.a1 Prupe.4G094300_v2.0.a1 Prupe.6G358300_v2.0.a1
pyrus_communis pycom08g08990 pycom10g20660 pycom10g20670 pycom10g20680 pycom10g20710 pycom10g20740 pycom13g00400 pycom15g08290
rosa_chinensis RchiOBHm_Chr1g0326861 RchiOBHm_Chr1g0326871 RchiOBHm_Chr1g0331391 RchiOBHm_Chr1g0336911 RchiOBHm_Chr1g0364001 RchiOBHm_Chr2g0174541 RchiOBHm_Chr2g0175041 RchiOBHm_Chr2g0175101 RchiOBHm_Chr2g0175121 RchiOBHm_Chr3g0486331 RchiOBHm_Chr5g0015581 RchiOBHm_Chr5g0016551 RchiOBHm_Chr5g0016561 RchiOBHm_Chr5g0016581 RchiOBHm_Chr5g0016601 RchiOBHm_Chr5g0016611 RchiOBHm_Chr5g0016641 RchiOBHm_Chr5g0016661 RchiOBHm_Chr5g0016691 RchiOBHm_Chr5g0016701 RchiOBHm_Chr5g0016731 RchiOBHm_Chr5g0016741 RchiOBHm_Chr5g0016811 RchiOBHm_Chr5g0016841 RchiOBHm_Chr5g0016871 RchiOBHm_Chr5g0016881 RchiOBHm_Chr5g0016931 RchiOBHm_Chr5g0017021 RchiOBHm_Chr5g0017041 RchiOBHm_Chr5g0017071 RchiOBHm_Chr5g0017091 RchiOBHm_Chr5g0017121 RchiOBHm_Chr5g0017141 RchiOBHm_Chr5g0017291 RchiOBHm_Chr5g0017321 RchiOBHm_Chr5g0017401 RchiOBHm_Chr5g0019001 RchiOBHm_Chr5g0019071 RchiOBHm_Chr5g0028941 RchiOBHm_Chr5g0052141 RchiOBHm_Chr5g0054721 RchiOBHm_Chr5g0054801 RchiOBHm_Chr5g0054931 RchiOBHm_Chr5g0054941 RchiOBHm_Chr6g0259291 RchiOBHm_Chr6g0292991 RchiOBHm_Chr6g0306911
rosa_laevigata RLG00000009465 RLG00000009468 RLG00000010755 RLG00000011976 RLG00000014541 RLG00000014542 RLG00000015169 RLG00000022308 RLG00000027529 RLG00000029324 RLG00000030244 RLG00000030245 RLG00000032210 RLG00000032211 RLG00000032257 RLG00000032259 RLG00000032260 RLG00000032261 RLG00000032262 RLG00000032268 RLG00000032269 RLG00000032272 RLG00000032282 RLG00000032283 RLG00000032308 RLG00000032413 RLG00000033129 RLG00000034945
rosa_multiflora Rmu_co8241929.1_g000001 Rmu_co8269227.1_g000001 Rmu_co8461259.1_g000001 Rmu_co8495385.1_g000001 Rmu_sc0000028.1_g000003 Rmu_sc0000083.1_g000009 Rmu_sc0000083.1_g000010 Rmu_sc0000083.1_g000031 Rmu_sc0000083.1_g000043 Rmu_sc0000083.1_g000046 Rmu_sc0000083.1_g000047 Rmu_sc0000563.1_g000024 Rmu_sc0000842.1_g000012 Rmu_sc0001235.1_g000001 Rmu_sc0001235.1_g000005 Rmu_sc0001235.1_g000009 Rmu_sc0001235.1_g000015 Rmu_sc0001235.1_g000016 Rmu_sc0001235.1_g000017 Rmu_sc0001473.1_g000036 Rmu_sc0001607.1_g000016 Rmu_sc0001788.1_g000006 Rmu_sc0002018.1_g000008 Rmu_sc0002028.1_g000001 Rmu_sc0002680.1_g000011 Rmu_sc0002798.1_g000023 Rmu_sc0002886.1_g000023 Rmu_sc0002989.1_g000012 Rmu_sc0003064.1_g000009 Rmu_sc0003382.1_g000006 Rmu_sc0003630.1_g000002 Rmu_sc0003630.1_g000047 Rmu_sc0003630.1_g000066 Rmu_sc0003630.1_g000067 Rmu_sc0003649.1_g000010 Rmu_sc0003688.1_g000005 Rmu_sc0003920.1_g000007 Rmu_sc0004765.1_g000007 Rmu_sc0004765.1_g000008 Rmu_sc0004920.1_g000011 Rmu_sc0005223.1_g000008 Rmu_sc0005223.1_g000010 Rmu_sc0005223.1_g000015 Rmu_sc0005223.1_g000016 Rmu_sc0005319.1_g000014 Rmu_sc0005319.1_g000015 Rmu_sc0005319.1_g000018 Rmu_sc0005319.1_g000019 Rmu_sc0005319.1_g000025 Rmu_sc0005418.1_g000007 Rmu_sc0005418.1_g000012 Rmu_sc0006106.1_g000011 Rmu_sc0006914.1_g000012 Rmu_sc0007023.1_g000001 Rmu_sc0007662.1_g000001 Rmu_sc0007920.1_g000002 Rmu_sc0007920.1_g000013 Rmu_sc0008053.1_g000016 Rmu_sc0008053.1_g000017 Rmu_sc0008053.1_g000018 Rmu_sc0008053.1_g000023 Rmu_sc0008053.1_g000050 Rmu_sc0009042.1_g000007 Rmu_sc0009042.1_g000008 Rmu_sc0010642.1_g000008 Rmu_sc0011109.1_g000002 Rmu_sc0011314.1_g000006 Rmu_sc0011974.1_g000006 Rmu_sc0012179.1_g000009 Rmu_sc0015169.1_g000001 Rmu_sc0016368.1_g000002 Rmu_sc0022659.1_g000001 Rmu_sc0027371.1_g000001 Rmu_sc0028213.1_g000001 Rmu_sc0034526.1_g000001 Rmu_sc0039366.1_g000002 Rmu_ssc0000050.1_g000084 Rmu_ssc0000050.1_g000088 Rmu_ssc0000167.1_g000017
rosa_roxburghii Rroxscaffold_1G00011340 Rroxscaffold_1G00025710 Rroxscaffold_1G00025870 Rroxscaffold_1G00026070 Rroxscaffold_1G00026170 Rroxscaffold_1G00026200 Rroxscaffold_1G00026270 Rroxscaffold_1G00050950 Rroxscaffold_1G00058900 Rroxscaffold_1G00060040 Rroxscaffold_1G00060060 Rroxscaffold_1G00060070 Rroxscaffold_1G00060080 Rroxscaffold_1G00060110 Rroxscaffold_1G00060120 Rroxscaffold_1G00060140 Rroxscaffold_1G00060170 Rroxscaffold_1G00060210 Rroxscaffold_1G00060220 Rroxscaffold_1G00060240 Rroxscaffold_1G00060250 Rroxscaffold_1G00060260 Rroxscaffold_1G00060300 Rroxscaffold_1G00060320 Rroxscaffold_1G00060330 Rroxscaffold_1G00060900 Rroxscaffold_1G00060920 Rroxscaffold_1G00073980 Rroxscaffold_2G00077560 Rroxscaffold_2G00077580 Rroxscaffold_2G00146990 Rroxscaffold_3G00236200 Rroxscaffold_3G00236210 Rroxscaffold_3G00236220 Rroxscaffold_4G00292760 Rroxscaffold_4G00315200 Rroxscaffold_4G00315240 Rroxscaffold_4G00326240 Rroxscaffold_4G00328980 Rroxscaffold_5G00341890 Rroxscaffold_7G00161350 Rroxscaffold_7G00174490 Rroxscaffold_7G00206550
rosa_rugosa Rorug01G0093000 Rorug01G0093100 Rorug01G0128800 Rorug01G0312000 Rorug01G0312000 Rorug02G0581100 Rorug03G0224600 Rorug05G0028500 Rorug05G0032700 Rorug05G0032800 Rorug05G0032900 Rorug05G0032900 Rorug05G0033000 Rorug05G0033100 Rorug05G0033300 Rorug05G0033400 Rorug05G0033900 Rorug05G0034900 Rorug05G0035000 Rorug05G0046900 Rorug05G0047500 Rorug05G0047500 Rorug05G0111600 Rorug05G0287900 Rorug05G0288700 Rorug05G0586900 Rorug06G0231700 Rorug06G0354300 Rorug06G0354400
rosa_samantha Rh1DG122200 Rh2DG686800 Rh5BG136600 Rh6AG344500 Rh6BG351900 Rh6CG359000 Rh6CG359100 Rh6CG387600 Rh6CG480500 Rh6DG344600 Rh6DG467400
rosa_wichuraiana Rw0G010250 Rw0G014820 Rw0G021400 Rw0G023100 Rw1G009450 Rw1G012100 Rw1G012180 Rw1G028360 Rw2G054260 Rw3G024370 Rw3G024420 Rw3G024470 Rw5G010850 Rw5G011010 Rw5G011020 Rw5G011050 Rw5G011080 Rw5G011120 Rw5G012300 Rw5G018470 Rw5G033830 Rw6G008930 Rw6G030070

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 780
Acc16I TGCGCA 1 cut(s) 315
Acc36I ACCTGC 1 cut(s) 780
AccB1I GGYRCC 1 cut(s) 1361
AccB7I CCANNNNNTGG 1 cut(s) 2255
AccI GTMKAC 1 cut(s) 1315
AccII CGCG 1 cut(s) 1577
AciI CCGC 4 cut(s) 32, 117, 209, 1577
AclWI GGATC 3 cut(s) 1010, 1537, 1866
AcoI YGGCCR 1 cut(s) 1977
AcsI RAATTY 6 cut(s) 176, 286, 937, 1089, 1484, 1923
AcuI CTGAAG 3 cut(s) 701, 1254, 1695
AfaI GTAC 4 cut(s) 64, 554, 1148, 2206
AfeI AGCGCT 1 cut(s) 1584
AfiI CCNNNNNNNGG 4 cut(s) 31, 519, 812, 2255
AgsI TTSAA 7 cut(s) 574, 604, 652, 799, 1153, 1547, 1918
AhdI GACNNNNNGTC 1 cut(s) 814
AhlI ACTAGT 1 cut(s) 1474
AjnI CCWGG 3 cut(s) 336, 844, 1758
Alw21I GWGCWC 1 cut(s) 935
Alw26I GTCTC 5 cut(s) 350, 524, 1024, 1116, 1955
AlwI GGATC 3 cut(s) 1010, 1537, 1866
AlwNI CAGNNNCTG 2 cut(s) 83, 1005
Aor51HI AGCGCT 1 cut(s) 1584
AoxI GGCC 4 cut(s) 643, 803, 1977, 2021
ApeKI GCWGC 4 cut(s) 80, 83, 102, 618
ApoI RAATTY 6 cut(s) 176, 286, 937, 1089, 1484, 1923
AspLEI GCGC 4 cut(s) 316, 1468, 1577, 1585
AspS9I GGNCC 3 cut(s) 320, 816, 1762
AsuHPI GGTGA 4 cut(s) 281, 340, 1408, 2186
AvaII GGWCC 3 cut(s) 320, 816, 1762
BaeGI GKGCMC 1 cut(s) 1366
BalI TGGCCA 1 cut(s) 1979
BanI GGYRCC 1 cut(s) 1361
BarI GAAGNNNNNNTAC 2 cut(s) 1455, 1487
BauI CACGAG 2 cut(s) 297, 942
BbsI GAAGAC 1 cut(s) 1217
Bbv12I GWGCWC 1 cut(s) 935
BbvI GCAGC 4 cut(s) 67, 70, 89, 630
BccI CCATC 7 cut(s) 220, 697, 869, 876, 927, 1021, 2249
BceAI ACGGC 6 cut(s) 231, 247, 383, 433, 1003, 1686
BcgI CGANNNNNNTGC 2 cut(s) 2215, 2249
BciT130I CCWGG 3 cut(s) 338, 846, 1760
BciVI GTATCC 2 cut(s) 968, 1748
BclI TGATCA 1 cut(s) 1378
BcoDI GTCTC 5 cut(s) 350, 524, 1024, 1116, 1955
BcuI ACTAGT 1 cut(s) 1474
BfaI CTAG 6 cut(s) 60, 342, 1191, 1475, 1829, 2187
BfmI CTRYAG 2 cut(s) 478, 616
BfoI RGCGCY 2 cut(s) 1469, 1586
BfuAI ACCTGC 1 cut(s) 780
BfuI GTATCC 2 cut(s) 968, 1748
BglI GCCNNNNNGGC 1 cut(s) 1985
BisI GCNGC 6 cut(s) 33, 81, 84, 103, 118, 619
BlsI GCNGC 6 cut(s) 34, 82, 85, 104, 119, 620
BmcAI AGTACT 2 cut(s) 64, 1148
Bme1390I CCNGG 3 cut(s) 338, 846, 1760
Bme18I GGWCC 3 cut(s) 320, 816, 1762
BmeRI GACNNNNNGTC 1 cut(s) 814
BmgT120I GGNCC 3 cut(s) 320, 816, 1762
BmiI GGNNCC 6 cut(s) 321, 817, 906, 1363, 1707, 1764
BmrFI CCNGG 3 cut(s) 338, 846, 1760
BmsI GCATC 6 cut(s) 301, 367, 452, 1017, 1893, 1985
BpiI GAAGAC 1 cut(s) 1217
Bpu10I CCTNAGC 1 cut(s) 1876
BpuEI CTTGAG 2 cut(s) 1262, 2020
BsaBI GATNNNNATC 1 cut(s) 1007
BsaJI CCNNGG 6 cut(s) 336, 1084, 1279, 1495, 1899, 2081
BsaWI WCCGGW 1 cut(s) 512
BsaXI ACNNNNNCTCC 4 cut(s) 494, 524, 1583, 1613
Bsc4I CCNNNNNNNGG 4 cut(s) 31, 519, 812, 2255
Bse118I RCCGGY 1 cut(s) 1855
Bse1I ACTGG 2 cut(s) 646, 2199
Bse3DI GCAATG 2 cut(s) 241, 393
Bse8I GATNNNNATC 1 cut(s) 1007
BseBI CCWGG 3 cut(s) 338, 846, 1760
BseDI CCNNGG 6 cut(s) 336, 1084, 1279, 1495, 1899, 2081
BseGI GGATG 4 cut(s) 467, 868, 1330, 2077
BseJI GATNNNNATC 1 cut(s) 1007
BseLI CCNNNNNNNGG 4 cut(s) 31, 519, 812, 2255
BseMI GCAATG 2 cut(s) 241, 393
BseNI ACTGG 2 cut(s) 646, 2199
BseRI GAGGAG 1 cut(s) 1591
BseSI GKGCMC 1 cut(s) 1366
BseXI GCAGC 4 cut(s) 67, 70, 89, 630
BsgI GTGCAG 1 cut(s) 587
Bsh1236I CGCG 1 cut(s) 1577
BshFI GGCC 4 cut(s) 645, 805, 1979, 2023
BshNI GGYRCC 1 cut(s) 1361
BsiHKAI GWGCWC 1 cut(s) 935
BsiSI CCGG 4 cut(s) 99, 513, 1322, 1856
BsiWI CGTACG 1 cut(s) 2204
BslFI GGGAC 2 cut(s) 1573, 1759
BslI CCNNNNNNNGG 4 cut(s) 31, 519, 812, 2255
BsmAI GTCTC 5 cut(s) 350, 524, 1024, 1116, 1955
BsmBI CGTCTC 1 cut(s) 1955
BsmFI GGGAC 2 cut(s) 1573, 1759
BsmI GAATGC 1 cut(s) 164
BsnI GGCC 4 cut(s) 645, 805, 1979, 2023
Bsp1286I GDGCHC 2 cut(s) 935, 1366
Bsp1407I TGTACA 1 cut(s) 552
Bsp143I GATC 7 cut(s) 6, 369, 1002, 1378, 1529, 1871, 2132
Bsp19I CCATGG 3 cut(s) 1495, 1899, 2081
BspACI CCGC 4 cut(s) 32, 117, 209, 1577
BspANI GGCC 4 cut(s) 645, 805, 1979, 2023
BspFNI CGCG 1 cut(s) 1577
BspHI TCATGA 1 cut(s) 1264
BspLI GGNNCC 6 cut(s) 321, 817, 906, 1363, 1707, 1764
BspMAI CTGCAG 1 cut(s) 620
BspMI ACCTGC 1 cut(s) 780
BspPI GGATC 3 cut(s) 1010, 1537, 1866
BspT107I GGYRCC 1 cut(s) 1361
BsrDI GCAATG 2 cut(s) 241, 393
BsrFI RCCGGY 1 cut(s) 1855
BsrGI TGTACA 1 cut(s) 552
BsrI ACTGG 2 cut(s) 646, 2199
BssAI RCCGGY 1 cut(s) 1855
BssECI CCNNGG 6 cut(s) 336, 1084, 1279, 1495, 1899, 2081
BssMI GATC 7 cut(s) 6, 369, 1002, 1378, 1529, 1871, 2132
BssNAI GTATAC 1 cut(s) 1316
BssSI CACGAG 2 cut(s) 297, 942
BssT1I CCWWGG 5 cut(s) 1084, 1279, 1495, 1899, 2081
Bst1107I GTATAC 1 cut(s) 1316
Bst2BI CACGAG 2 cut(s) 297, 942
Bst2UI CCWGG 3 cut(s) 338, 846, 1760
Bst4CI ACNGT 6 cut(s) 269, 565, 1303, 1966, 2071, 2241
Bst6I CTCTTC 2 cut(s) 363, 2106
BstAPI GCANNNNNTGC 1 cut(s) 80
BstAUI TGTACA 1 cut(s) 552
BstC8I GCNNGC 4 cut(s) 775, 842, 1882, 2228
BstDEI CTNAG 1 cut(s) 1876
BstDSI CCRYGG 3 cut(s) 1495, 1899, 2081
BstF5I GGATG 4 cut(s) 467, 868, 1330, 2077
BstFNI CGCG 1 cut(s) 1577
BstH2I RGCGCY 2 cut(s) 1469, 1586
BstHHI GCGC 4 cut(s) 316, 1468, 1577, 1585
BstKTI GATC 7 cut(s) 9, 372, 1005, 1381, 1532, 1874, 2135
BstMAI GTCTC 5 cut(s) 350, 524, 1024, 1116, 1955
BstMBI GATC 7 cut(s) 6, 369, 1002, 1378, 1529, 1871, 2132
BstMWI GCNNNNNNNGC 5 cut(s) 80, 89, 489, 779, 1985
BstNI CCWGG 3 cut(s) 338, 846, 1760
BstNSI RCATGY 1 cut(s) 2230
BstSCI CCNGG 3 cut(s) 336, 844, 1758
BstSFI CTRYAG 2 cut(s) 478, 616
BstSLI GKGCMC 1 cut(s) 1366
BstUI CGCG 1 cut(s) 1577
BstV1I GCAGC 4 cut(s) 67, 70, 89, 630
BstV2I GAAGAC 1 cut(s) 1217
BstX2I RGATCY 2 cut(s) 1002, 1871
BstXI CCANNNNNNTGG 1 cut(s) 875
BstYI RGATCY 2 cut(s) 1002, 1871
BstZ17I GTATAC 1 cut(s) 1316
BsuI GTATCC 2 cut(s) 968, 1748
BsuRI GGCC 4 cut(s) 645, 805, 1979, 2023
BtgI CCRYGG 3 cut(s) 1495, 1899, 2081
BtsCI GGATG 4 cut(s) 467, 868, 1330, 2077
BtsI GCAGTG 1 cut(s) 2211
BtsIMutI CAGTG 1 cut(s) 2211
BveI ACCTGC 1 cut(s) 780
Cac8I GCNNGC 4 cut(s) 775, 842, 1882, 2228
CaiI CAGNNNCTG 2 cut(s) 83, 1005
CciI TCATGA 1 cut(s) 1264
CfoI GCGC 4 cut(s) 316, 1468, 1577, 1585
Cfr10I RCCGGY 1 cut(s) 1855
Cfr13I GGNCC 3 cut(s) 320, 816, 1762
CseI GACGC 1 cut(s) 2156
Csp6I GTAC 4 cut(s) 63, 553, 1147, 2205
CviQI GTAC 4 cut(s) 63, 553, 1147, 2205
DdeI CTNAG 1 cut(s) 1876
DpnI GATC 7 cut(s) 8, 371, 1004, 1380, 1531, 1873, 2134
DpnII GATC 7 cut(s) 6, 369, 1002, 1378, 1529, 1871, 2132
DriI GACNNNNNGTC 1 cut(s) 814
EaeI YGGCCR 1 cut(s) 1977
Eam1104I CTCTTC 2 cut(s) 363, 2106
Eam1105I GACNNNNNGTC 1 cut(s) 814
EarI CTCTTC 2 cut(s) 363, 2106
Eco130I CCWWGG 5 cut(s) 1084, 1279, 1495, 1899, 2081
Eco147I AGGCCT 2 cut(s) 805, 2023
Eco47I GGWCC 3 cut(s) 320, 816, 1762
Eco47III AGCGCT 1 cut(s) 1584
Eco57I CTGAAG 3 cut(s) 701, 1254, 1695
EcoRI GAATTC 2 cut(s) 176, 1484
EcoRII CCWGG 3 cut(s) 336, 844, 1758
EcoT14I CCWWGG 5 cut(s) 1084, 1279, 1495, 1899, 2081
ErhI CCWWGG 5 cut(s) 1084, 1279, 1495, 1899, 2081
Esp3I CGTCTC 1 cut(s) 1955
FalI AAGNNNNNCTT 4 cut(s) 146, 178, 1023, 1055
FaqI GGGAC 2 cut(s) 1573, 1759
FauNDI CATATG 1 cut(s) 473
FbaI TGATCA 1 cut(s) 1378
FblI GTMKAC 1 cut(s) 1315
Fnu4HI GCNGC 6 cut(s) 33, 81, 84, 103, 118, 619
FokI GGATG 4 cut(s) 474, 855, 1337, 2064
Fsp4HI GCNGC 6 cut(s) 33, 81, 84, 103, 118, 619
FspBI CTAG 6 cut(s) 60, 342, 1191, 1475, 1829, 2187
FspI TGCGCA 1 cut(s) 315
GlaI GCGC 4 cut(s) 315, 1467, 1576, 1584
GluI GCNGC 6 cut(s) 33, 81, 84, 103, 118, 619
HaeII RGCGCY 2 cut(s) 1469, 1586
HaeIII GGCC 4 cut(s) 645, 805, 1979, 2023
HapII CCGG 4 cut(s) 99, 513, 1322, 1856
HgaI GACGC 1 cut(s) 2156
HhaI GCGC 4 cut(s) 316, 1468, 1577, 1585
Hin6I GCGC 4 cut(s) 314, 1466, 1575, 1583
HinP1I GCGC 4 cut(s) 314, 1466, 1575, 1583
HincII GTYRAC 1 cut(s) 1390
HindII GTYRAC 1 cut(s) 1390
HinfI GANTC 4 cut(s) 390, 737, 1275, 1918
HpaI GTTAAC 1 cut(s) 1390
HpaII CCGG 4 cut(s) 99, 513, 1322, 1856
HphI GGTGA 4 cut(s) 281, 340, 1408, 2186
Hpy166II GTNNAC 5 cut(s) 1306, 1316, 1390, 1810, 2261
Hpy188I TCNGA 7 cut(s) 109, 376, 428, 561, 702, 1684, 2146
Hpy188III TCNNGA 8 cut(s) 260, 299, 872, 942, 1265, 1628, 1698, 1928
Hpy8I GTNNAC 5 cut(s) 1306, 1316, 1390, 1810, 2261
Hpy99I CGWCG 1 cut(s) 989
HpyAV CCTTC 7 cut(s) 148, 637, 848, 1240, 1280, 1719, 2165
HpyCH4III ACNGT 6 cut(s) 269, 565, 1303, 1966, 2071, 2241
HpyCH4IV ACGT 1 cut(s) 2154
HpyF10VI GCNNNNNNNGC 5 cut(s) 80, 89, 489, 779, 1985
HpyF3I CTNAG 1 cut(s) 1876
HpySE526I ACGT 1 cut(s) 2154
HspAI GCGC 4 cut(s) 314, 1466, 1575, 1583
Ksp22I TGATCA 1 cut(s) 1378
KspAI GTTAAC 1 cut(s) 1390
Kzo9I GATC 7 cut(s) 6, 369, 1002, 1378, 1529, 1871, 2132
LmnI GCTCC 4 cut(s) 515, 763, 1691, 1834
Lsp1109I GCAGC 4 cut(s) 67, 70, 89, 630
LweI GCATC 6 cut(s) 301, 367, 452, 1017, 1893, 1985
MaeI CTAG 6 cut(s) 60, 342, 1191, 1475, 1829, 2187
MaeII ACGT 1 cut(s) 2154
MaeIII GTNAC 9 cut(s) 244, 305, 407, 824, 848, 965, 1173, 1533, 2065
MalI GATC 7 cut(s) 8, 371, 1004, 1380, 1531, 1873, 2134
MboI GATC 7 cut(s) 6, 369, 1002, 1378, 1529, 1871, 2132
MfeI CAATTG 2 cut(s) 187, 720
MflI RGATCY 2 cut(s) 1002, 1871
MhlI GDGCHC 2 cut(s) 935, 1366
MlsI TGGCCA 1 cut(s) 1979
MluNI TGGCCA 1 cut(s) 1979
MlyI GAGTC 2 cut(s) 731, 1284
MmeI TCCRAC 2 cut(s) 347, 2031
Mox20I TGGCCA 1 cut(s) 1979
MscI TGGCCA 1 cut(s) 1979
MseI TTAA 8 cut(s) 284, 609, 711, 1131, 1389, 2091, 2139, 2243
MslI CAYNNNNRTG 5 cut(s) 594, 873, 1425, 1629, 2256
Msp20I TGGCCA 1 cut(s) 1979
MspA1I CMGCKG 1 cut(s) 80
MspI CCGG 4 cut(s) 99, 513, 1322, 1856
MspR9I CCNGG 3 cut(s) 338, 846, 1760
MunI CAATTG 2 cut(s) 187, 720
Mva1269I GAATGC 1 cut(s) 164
MvaI CCWGG 3 cut(s) 338, 846, 1760
MvnI CGCG 1 cut(s) 1577
MwoI GCNNNNNNNGC 5 cut(s) 80, 89, 489, 779, 1985
NcoI CCATGG 3 cut(s) 1495, 1899, 2081
NdeI CATATG 1 cut(s) 473
NdeII GATC 7 cut(s) 6, 369, 1002, 1378, 1529, 1871, 2132
NlaIV GGNNCC 6 cut(s) 321, 817, 906, 1363, 1707, 1764
NmuCI GTSAC 4 cut(s) 407, 965, 1533, 2065
NsbI TGCGCA 1 cut(s) 315
NspI RCATGY 1 cut(s) 2230
PaeI GCATGC 1 cut(s) 2230
PagI TCATGA 1 cut(s) 1264
PaqCI CACCTGC 1 cut(s) 780
PceI AGGCCT 2 cut(s) 805, 2023
PcsI WCGNNNNNNNCGW 1 cut(s) 2213
PctI GAATGC 1 cut(s) 164
PfeI GAWTC 2 cut(s) 390, 1918
Pfl23II CGTACG 1 cut(s) 2204
PflMI CCANNNNNTGG 1 cut(s) 2255
PkrI GCNGC 6 cut(s) 34, 82, 85, 104, 119, 620
PleI GAGTC 2 cut(s) 731, 1283
PpsI GAGTC 2 cut(s) 731, 1283
Psp6I CCWGG 3 cut(s) 336, 844, 1758
PspGI CCWGG 3 cut(s) 336, 844, 1758
PspLI CGTACG 1 cut(s) 2204
PspN4I GGNNCC 6 cut(s) 321, 817, 906, 1363, 1707, 1764
PspPI GGNCC 3 cut(s) 320, 816, 1762
PstI CTGCAG 1 cut(s) 620
PstNI CAGNNNCTG 2 cut(s) 83, 1005
PsuI RGATCY 2 cut(s) 1002, 1871
PvuII CAGCTG 1 cut(s) 80
RsaI GTAC 4 cut(s) 64, 554, 1148, 2206
RsaNI GTAC 4 cut(s) 63, 553, 1147, 2205
RseI CAYNNNNRTG 5 cut(s) 594, 873, 1425, 1629, 2256
SaqAI TTAA 8 cut(s) 284, 609, 711, 1131, 1389, 2091, 2139, 2243
SatI GCNGC 6 cut(s) 33, 81, 84, 103, 118, 619
Sau3AI GATC 7 cut(s) 6, 369, 1002, 1378, 1529, 1871, 2132
Sau96I GGNCC 3 cut(s) 320, 816, 1762
ScaI AGTACT 2 cut(s) 64, 1148
SchI GAGTC 2 cut(s) 731, 1284
ScrFI CCNGG 3 cut(s) 338, 846, 1760
SduI GDGCHC 2 cut(s) 935, 1366
SfaNI GCATC 6 cut(s) 301, 367, 452, 1017, 1893, 1985
SfcI CTRYAG 2 cut(s) 478, 616
SinI GGWCC 3 cut(s) 320, 816, 1762
SmiMI CAYNNNNRTG 5 cut(s) 594, 873, 1425, 1629, 2256
SmlI CTYRAG 2 cut(s) 1241, 1999
SmoI CTYRAG 2 cut(s) 1241, 1999
SpeI ACTAGT 1 cut(s) 1474
SphI GCATGC 1 cut(s) 2230
SseBI AGGCCT 2 cut(s) 805, 2023
SsiI CCGC 4 cut(s) 32, 117, 209, 1577
SspI AATATT 2 cut(s) 282, 1648
SspMI CTAG 6 cut(s) 60, 342, 1191, 1475, 1829, 2187
StuI AGGCCT 2 cut(s) 805, 2023
StyD4I CCNGG 3 cut(s) 336, 844, 1758
StyI CCWWGG 5 cut(s) 1084, 1279, 1495, 1899, 2081
TaaI ACNGT 6 cut(s) 269, 565, 1303, 1966, 2071, 2241
TaiI ACGT 1 cut(s) 2157
TaqI TCGA 9 cut(s) 5, 200, 438, 486, 1205, 1352, 1627, 2131, 2235
TatI WGTACW 3 cut(s) 62, 552, 1146
TauI GCSGC 2 cut(s) 35, 120
TfiI GAWTC 2 cut(s) 390, 1918
Tru1I TTAA 8 cut(s) 284, 609, 711, 1131, 1389, 2091, 2139, 2243
Tru9I TTAA 8 cut(s) 284, 609, 711, 1131, 1389, 2091, 2139, 2243
TscAI CASTG 1 cut(s) 2218
TseFI GTSAC 4 cut(s) 407, 965, 1533, 2065
TseI GCWGC 4 cut(s) 80, 83, 102, 618
Tsp45I GTSAC 4 cut(s) 407, 965, 1533, 2065
TspGWI ACGGA 1 cut(s) 776
TspRI CASTG 1 cut(s) 2218
Van91I CCANNNNNTGG 1 cut(s) 2255
VpaK11BI GGWCC 3 cut(s) 320, 816, 1762
XapI RAATTY 6 cut(s) 176, 286, 937, 1089, 1484, 1923
XceI RCATGY 1 cut(s) 2230
XcmI CCANNNNNNNNNTGG 1 cut(s) 842
XmiI GTMKAC 1 cut(s) 1315
XspI CTAG 6 cut(s) 60, 342, 1191, 1475, 1829, 2187
ZrmI AGTACT 2 cut(s) 64, 1148
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.