RLG00000032262

Wall-associated receptor kinase

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
Physical Location & Seq
Reverse (-)
12727805 .. 12730084
2280 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000032262

Sequence Viewer

Length: 1632 bp
ATGCAATTCATACTGGCAGCGATACTGGTTCTCTTCACATTTGCAGCCGCGGCCGAAGAAGCAGTAGCAGCTGAAGCTGTCCTGCCTCAAGCCAAGCCTGGCTGCACTGACCGCTGTGGCAACCTCACCATTCCATATCCATTTGGCATAGAGCCTGATTGTTACATGACCAAAGACTTTTCTGTTCGTTGTAACACATCCACTAAACCCCCGACAGCAATGTGGGATGATAGTCCCATCGCTGTTAACAACATATACCTGGCTGAAGGTGAGATGCAAATAGCGCAGTACGTAGCCTACGATTGCTATGACAGCCAGGGCTGGACTAATTCCAGCAAACCATTTCTCGCCGTGCCTCCTTTCATCATCTCTCATACTAGAAACAAGTTCATTGCCATTGGTTGCGATGCTTATGCACTTTTCAGAGGTTACCGTGCAGACGAAGAGAGGTACGTGACCGGATGCATGTCCATATGTGACAACCTTGACAGCGTTGAACAGTCTTGCTCCGGGGTTGGGTGTTGCCAAACTGACATCCCTAGAGGACTTAAGAACTACACTCTCAGACTGGATAGCTACTATAATCATACATACATACTGGACTTCAATCCACGCAGCTATGCCTTCATTGTGGAAGAAGGCCAGTTTACCTTTTCCCCGAATACAAGTTTTGAAGAACTTGCCAACACTGAAAAGCTTCCCGCGATTCTTAATTGGGAAATTGGGGAAGGGCCATGTGATGAAGCTCAAAAGAAAGATGATTATGCATGCAAGGGAAATAGTAAGTGTGTCAATCGGAACATCAGCGATGAGCGATCTGGTTATATTTGTCACTGCCAGCCGGGTTATCAAGGGAACCCCTACCTCCCTGATGGTTGCCAAGATATTGACGAGTGCAAGGTTTCAAAACCATGCACCAATGGAAGGTGTGAAAATTCACCTGGAAGTTACTCTTGTTTGTGTGACAAAGGGTACAGAACCAATGGAACCAATAATCAAAGTTGTATTGAGGTTCCCAAAAATCAACCAAAGACCACGCTCGTGCTCCTGCTTATTGTATCATTGAGTGTAACTGGCGGCTTCTTAGTTTTATTTGTTGGAATTTCATGGATATGTTGCGGAATAAAGAACAGAAAATTCATGAAACTCAAAGAAAAGTACTTTAAAGAGAATGGTGGCTTATTGTTACTACAGAAACTCGCTAATAATGGAGGCTCAGTGGAGACAACAAAAATATTCACCACAGAAGAACTAGAGAAGGCAACAAACAATTACCATGAGAGTAGAGTCCTTGGAGAAGGAGGCTACGGAACAGTTTATAAAGGGGTACTACTTGACAACACAGTGGTTGCCATAAAGAAGTCCAGAGGTGGTACCTCGATCCAGAATGAACAGTTTGTTAATGAGGTGGTTGTTCTTTCCCAAATCAACCACAGAAATGTGGTGAAGCTACTAGGTTGTTGTTTAGAGACAGCAGTACCTTTACTAGTATACAAGTTTGTCACCCATGGCACTTTATATGAGCACATTCATAGAAAAAGATCACTACTGTCATTCGAACTACGAATGAAGATAGCTGTTGAAACAGTAGGAGCACTTGCTAGAATCAAATATGGACTTGTCACATTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

544

Amino Acids

60.31

Weight (kDa)

6.14

Isoelectric Point (pI)

36.33

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GUB_WAK_bind PF13947 35 - 95 7.3e-10 Wall-associated receptor kinase galacturonan-binding
EGF_CA PF07645 295 - 335 6.1e-08 Calcium-binding EGF domain
Pkinase PF00069 425 - 534 7.8e-14 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 428 - 530 1.2e-17 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000066)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G21210 AT1G21230 AT1G21240 AT1G21240 AT1G21245 AT1G21250 AT1G21270 AT1G22720 AT3G25490
fragaria_vesca FvH4_2g35051 FvH4_2g35051 FvH4_2g35060 FvH4_3g10281 FvH4_3g10285 FvH4_3g10286 FvH4_3g10311 FvH4_3g10311 FvH4_3g10320 FvH4_3g10332 FvH4_3g10340 FvH4_3g10350 FvH4_3g10360 FvH4_3g10390 FvH4_3g10412 FvH4_3g10413 FvH4_3g10461 FvH4_3g10462 FvH4_3g10470 FvH4_3g10510 FvH4_3g10520 FvH4_3g10530 FvH4_3g10550 FvH4_3g10560 FvH4_3g10611 FvH4_3g11730 FvH4_6g53140 FvH4_6g53142 FvH4_7g31880 FvH4_7g31910 FvH4_7g31920
malus_domestica MD05G1269900.v1.1 MD05G1270000.v1.1 MD05G1270200.v1.1 MD05G1270400.v1.1 MD05G1270500.v1.1 MD05G1270600.v1.1 MD05G1270800.v1.1 MD05G1270900.v1.1 MD07G1183800.v1.1 MD08G1107600.v1.1 MD10G1248500.v1.1 MD10G1249200.v1.1 MD10G1249500.v1.1 MD10G1250000.v1.1 MD10G1250500.v1.1 MD10G1250900.v1.1 MD10G1251200.v1.1 MD10G1251400.v1.1 MD13G1004600.v1.1 MD15G1088400.v1.1
prunus_persica Prupe.1G442400_v2.0.a1 Prupe.1G442500_v2.0.a1 Prupe.2G223400_v2.0.a1 Prupe.4G091900_v2.0.a1 Prupe.4G093200_v2.0.a1 Prupe.4G093300_v2.0.a1 Prupe.4G093400_v2.0.a1 Prupe.4G093500_v2.0.a1 Prupe.4G094100_v2.0.a1 Prupe.4G094200_v2.0.a1 Prupe.4G094300_v2.0.a1 Prupe.6G358300_v2.0.a1
pyrus_communis pycom08g08990 pycom10g20660 pycom10g20670 pycom10g20680 pycom10g20710 pycom10g20740 pycom13g00400 pycom15g08290
rosa_chinensis RchiOBHm_Chr1g0326861 RchiOBHm_Chr1g0326871 RchiOBHm_Chr1g0331391 RchiOBHm_Chr1g0336911 RchiOBHm_Chr1g0364001 RchiOBHm_Chr2g0174541 RchiOBHm_Chr2g0175041 RchiOBHm_Chr2g0175101 RchiOBHm_Chr2g0175121 RchiOBHm_Chr3g0486331 RchiOBHm_Chr5g0015581 RchiOBHm_Chr5g0016551 RchiOBHm_Chr5g0016561 RchiOBHm_Chr5g0016581 RchiOBHm_Chr5g0016601 RchiOBHm_Chr5g0016611 RchiOBHm_Chr5g0016641 RchiOBHm_Chr5g0016661 RchiOBHm_Chr5g0016691 RchiOBHm_Chr5g0016701 RchiOBHm_Chr5g0016731 RchiOBHm_Chr5g0016741 RchiOBHm_Chr5g0016811 RchiOBHm_Chr5g0016841 RchiOBHm_Chr5g0016871 RchiOBHm_Chr5g0016881 RchiOBHm_Chr5g0016931 RchiOBHm_Chr5g0017021 RchiOBHm_Chr5g0017041 RchiOBHm_Chr5g0017071 RchiOBHm_Chr5g0017091 RchiOBHm_Chr5g0017121 RchiOBHm_Chr5g0017141 RchiOBHm_Chr5g0017291 RchiOBHm_Chr5g0017321 RchiOBHm_Chr5g0017401 RchiOBHm_Chr5g0019001 RchiOBHm_Chr5g0019071 RchiOBHm_Chr5g0028941 RchiOBHm_Chr5g0052141 RchiOBHm_Chr5g0054721 RchiOBHm_Chr5g0054801 RchiOBHm_Chr5g0054931 RchiOBHm_Chr5g0054941 RchiOBHm_Chr6g0259291 RchiOBHm_Chr6g0292991 RchiOBHm_Chr6g0306911
rosa_laevigata RLG00000009465 RLG00000009468 RLG00000010755 RLG00000011976 RLG00000014541 RLG00000014542 RLG00000015169 RLG00000022308 RLG00000027529 RLG00000029324 RLG00000030244 RLG00000030245 RLG00000032210 RLG00000032211 RLG00000032257 RLG00000032259 RLG00000032260 RLG00000032261 RLG00000032262 RLG00000032268 RLG00000032269 RLG00000032272 RLG00000032282 RLG00000032283 RLG00000032308 RLG00000032413 RLG00000033129 RLG00000034945
rosa_multiflora Rmu_co8241929.1_g000001 Rmu_co8269227.1_g000001 Rmu_co8461259.1_g000001 Rmu_co8495385.1_g000001 Rmu_sc0000028.1_g000003 Rmu_sc0000083.1_g000009 Rmu_sc0000083.1_g000010 Rmu_sc0000083.1_g000031 Rmu_sc0000083.1_g000043 Rmu_sc0000083.1_g000046 Rmu_sc0000083.1_g000047 Rmu_sc0000563.1_g000024 Rmu_sc0000842.1_g000012 Rmu_sc0001235.1_g000001 Rmu_sc0001235.1_g000005 Rmu_sc0001235.1_g000009 Rmu_sc0001235.1_g000015 Rmu_sc0001235.1_g000016 Rmu_sc0001235.1_g000017 Rmu_sc0001473.1_g000036 Rmu_sc0001607.1_g000016 Rmu_sc0001788.1_g000006 Rmu_sc0002018.1_g000008 Rmu_sc0002028.1_g000001 Rmu_sc0002680.1_g000011 Rmu_sc0002798.1_g000023 Rmu_sc0002886.1_g000023 Rmu_sc0002989.1_g000012 Rmu_sc0003064.1_g000009 Rmu_sc0003382.1_g000006 Rmu_sc0003630.1_g000002 Rmu_sc0003630.1_g000047 Rmu_sc0003630.1_g000066 Rmu_sc0003630.1_g000067 Rmu_sc0003649.1_g000010 Rmu_sc0003688.1_g000005 Rmu_sc0003920.1_g000007 Rmu_sc0004765.1_g000007 Rmu_sc0004765.1_g000008 Rmu_sc0004920.1_g000011 Rmu_sc0005223.1_g000008 Rmu_sc0005223.1_g000010 Rmu_sc0005223.1_g000015 Rmu_sc0005223.1_g000016 Rmu_sc0005319.1_g000014 Rmu_sc0005319.1_g000015 Rmu_sc0005319.1_g000018 Rmu_sc0005319.1_g000019 Rmu_sc0005319.1_g000025 Rmu_sc0005418.1_g000007 Rmu_sc0005418.1_g000012 Rmu_sc0006106.1_g000011 Rmu_sc0006914.1_g000012 Rmu_sc0007023.1_g000001 Rmu_sc0007662.1_g000001 Rmu_sc0007920.1_g000002 Rmu_sc0007920.1_g000013 Rmu_sc0008053.1_g000016 Rmu_sc0008053.1_g000017 Rmu_sc0008053.1_g000018 Rmu_sc0008053.1_g000023 Rmu_sc0008053.1_g000050 Rmu_sc0009042.1_g000007 Rmu_sc0009042.1_g000008 Rmu_sc0010642.1_g000008 Rmu_sc0011109.1_g000002 Rmu_sc0011314.1_g000006 Rmu_sc0011974.1_g000006 Rmu_sc0012179.1_g000009 Rmu_sc0015169.1_g000001 Rmu_sc0016368.1_g000002 Rmu_sc0022659.1_g000001 Rmu_sc0027371.1_g000001 Rmu_sc0028213.1_g000001 Rmu_sc0034526.1_g000001 Rmu_sc0039366.1_g000002 Rmu_ssc0000050.1_g000084 Rmu_ssc0000050.1_g000088 Rmu_ssc0000167.1_g000017
rosa_roxburghii Rroxscaffold_1G00011340 Rroxscaffold_1G00025710 Rroxscaffold_1G00025870 Rroxscaffold_1G00026070 Rroxscaffold_1G00026170 Rroxscaffold_1G00026200 Rroxscaffold_1G00026270 Rroxscaffold_1G00050950 Rroxscaffold_1G00058900 Rroxscaffold_1G00060040 Rroxscaffold_1G00060060 Rroxscaffold_1G00060070 Rroxscaffold_1G00060080 Rroxscaffold_1G00060110 Rroxscaffold_1G00060120 Rroxscaffold_1G00060140 Rroxscaffold_1G00060170 Rroxscaffold_1G00060210 Rroxscaffold_1G00060220 Rroxscaffold_1G00060240 Rroxscaffold_1G00060250 Rroxscaffold_1G00060260 Rroxscaffold_1G00060300 Rroxscaffold_1G00060320 Rroxscaffold_1G00060330 Rroxscaffold_1G00060900 Rroxscaffold_1G00060920 Rroxscaffold_1G00073980 Rroxscaffold_2G00077560 Rroxscaffold_2G00077580 Rroxscaffold_2G00146990 Rroxscaffold_3G00236200 Rroxscaffold_3G00236210 Rroxscaffold_3G00236220 Rroxscaffold_4G00292760 Rroxscaffold_4G00315200 Rroxscaffold_4G00315240 Rroxscaffold_4G00326240 Rroxscaffold_4G00328980 Rroxscaffold_5G00341890 Rroxscaffold_7G00161350 Rroxscaffold_7G00174490 Rroxscaffold_7G00206550
rosa_rugosa Rorug01G0093000 Rorug01G0093100 Rorug01G0128800 Rorug01G0312000 Rorug01G0312000 Rorug02G0581100 Rorug03G0224600 Rorug05G0028500 Rorug05G0032700 Rorug05G0032800 Rorug05G0032900 Rorug05G0032900 Rorug05G0033000 Rorug05G0033100 Rorug05G0033300 Rorug05G0033400 Rorug05G0033900 Rorug05G0034900 Rorug05G0035000 Rorug05G0046900 Rorug05G0047500 Rorug05G0047500 Rorug05G0111600 Rorug05G0287900 Rorug05G0288700 Rorug05G0586900 Rorug06G0231700 Rorug06G0354300 Rorug06G0354400
rosa_samantha Rh1DG122200 Rh2DG686800 Rh5BG136600 Rh6AG344500 Rh6BG351900 Rh6CG359000 Rh6CG359100 Rh6CG387600 Rh6CG480500 Rh6DG344600 Rh6DG467400
rosa_wichuraiana Rw0G010250 Rw0G014820 Rw0G021400 Rw0G023100 Rw1G009450 Rw1G012100 Rw1G012180 Rw1G028360 Rw2G054260 Rw3G024370 Rw3G024420 Rw3G024470 Rw5G010850 Rw5G011010 Rw5G011020 Rw5G011050 Rw5G011080 Rw5G011120 Rw5G012300 Rw5G018470 Rw5G033830 Rw6G008930 Rw6G030070

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1320
Acc65I GGTACC 1 cut(s) 1373
AccB1I GGYRCC 1 cut(s) 1373
AccI GTMKAC 1 cut(s) 1491
AccII CGCG 2 cut(s) 50, 704
AciI CCGC 6 cut(s) 48, 50, 112, 702, 1077, 1119
AclWI GGATC 1 cut(s) 1375
AcoI YGGCCR 1 cut(s) 51
AcsI RAATTY 3 cut(s) 934, 1101, 1136
AcuI CTGAAG 2 cut(s) 93, 285
AfaI GTAC 7 cut(s) 290, 452, 974, 1160, 1329, 1375, 1479
AfiI CCNNNNNNNGG 2 cut(s) 516, 924
AflII CTTAAG 1 cut(s) 548
AgsI TTSAA 5 cut(s) 497, 607, 674, 906, 1583
AhlI ACTAGT 1 cut(s) 1486
AjnI CCWGG 4 cut(s) 97, 258, 315, 940
AleI CACNNNNGTG 1 cut(s) 1040
AluBI AGCT 8 cut(s) 71, 77, 576, 618, 697, 746, 1450, 1577
AluI AGCT 8 cut(s) 71, 77, 576, 618, 697, 746, 1450, 1577
Alw21I GWGCWC 3 cut(s) 1047, 1527, 1597
Alw26I GTCTC 2 cut(s) 1217, 1463
AlwI GGATC 1 cut(s) 1375
AoxI GGCC 3 cut(s) 51, 640, 731
ApeKI GCWGC 5 cut(s) 17, 44, 68, 102, 615
ApoI RAATTY 3 cut(s) 934, 1101, 1136
Asp700I GAANNNNTTC 1 cut(s) 696
Asp718I GGTACC 1 cut(s) 1373
AspLEI GCGC 1 cut(s) 286
AspS9I GGNCC 1 cut(s) 731
AsuC2I CCSGG 2 cut(s) 511, 843
AsuHPI GGTGA 6 cut(s) 118, 281, 930, 1231, 1456, 1495
AsuII TTCGAA 1 cut(s) 1557
BaeI ACNNNNGTAYC 2 cut(s) 1461, 1494
BanI GGYRCC 1 cut(s) 1373
BauI CACGAG 1 cut(s) 1040
Bbv12I GWGCWC 3 cut(s) 1047, 1527, 1597
BbvI GCAGC 5 cut(s) 29, 56, 80, 89, 627
BccI CCATC 2 cut(s) 245, 866
BceAI ACGGC 1 cut(s) 335
BcgI CGANNNNNNTGC 2 cut(s) 395, 429
BciT130I CCWGG 4 cut(s) 99, 260, 317, 942
BcnI CCSGG 2 cut(s) 511, 843
BcoDI GTCTC 2 cut(s) 1217, 1463
BcuI ACTAGT 1 cut(s) 1486
BfaI CTAG 6 cut(s) 378, 540, 1253, 1454, 1487, 1602
BfmI CTRYAG 1 cut(s) 1190
BfrI CTTAAG 1 cut(s) 548
BisI GCNGC 8 cut(s) 18, 45, 48, 51, 69, 103, 616, 1078
BlsI GCNGC 8 cut(s) 19, 46, 49, 52, 70, 104, 617, 1079
BmcAI AGTACT 1 cut(s) 1160
Bme1390I CCNGG 6 cut(s) 99, 260, 317, 511, 843, 942
BmgT120I GGNCC 1 cut(s) 731
BmiI GGNNCC 4 cut(s) 857, 988, 1014, 1375
BmrFI CCNGG 6 cut(s) 99, 260, 317, 511, 843, 942
BmsI GCATC 3 cut(s) 264, 397, 452
Bpu14I TTCGAA 1 cut(s) 1557
BpuEI CTTGAG 1 cut(s) 72
BpuMI CCSGG 2 cut(s) 511, 843
BsaAI YACGTR 2 cut(s) 292, 454
BsaJI CCNNGG 5 cut(s) 48, 316, 510, 1291, 1507
BsaWI WCCGGW 1 cut(s) 458
BsaXI ACNNNNNCTCC 2 cut(s) 1203, 1233
Bsc4I CCNNNNNNNGG 2 cut(s) 516, 924
Bse1I ACTGG 6 cut(s) 18, 30, 573, 603, 643, 1078
Bse3DI GCAATG 2 cut(s) 225, 390
BseBI CCWGG 4 cut(s) 99, 260, 317, 942
BseDI CCNNGG 5 cut(s) 48, 316, 510, 1291, 1507
BseGI GGATG 4 cut(s) 197, 232, 467, 534
BseLI CCNNNNNNNGG 2 cut(s) 516, 924
BseMI GCAATG 2 cut(s) 225, 390
BseMII CTCAG 2 cut(s) 577, 1230
BseNI ACTGG 6 cut(s) 18, 30, 573, 603, 643, 1078
BseX3I CGGCCG 1 cut(s) 51
BseXI GCAGC 5 cut(s) 29, 56, 80, 89, 627
BsgI GTGCAG 2 cut(s) 88, 456
Bsh1236I CGCG 2 cut(s) 50, 704
Bsh1285I CGRYCG 1 cut(s) 54
BshFI GGCC 3 cut(s) 53, 642, 733
BshNI GGYRCC 1 cut(s) 1373
BsiEI CGRYCG 1 cut(s) 54
BsiHKAI GWGCWC 3 cut(s) 1047, 1527, 1597
BsiSI CCGG 3 cut(s) 459, 510, 842
BslFI GGGAC 1 cut(s) 219
BslI CCNNNNNNNGG 2 cut(s) 516, 924
BsmAI GTCTC 2 cut(s) 1217, 1463
BsmFI GGGAC 1 cut(s) 219
BsnI GGCC 3 cut(s) 53, 642, 733
Bsp119I TTCGAA 1 cut(s) 1557
Bsp1286I GDGCHC 3 cut(s) 1047, 1527, 1597
Bsp143I GATC 3 cut(s) 815, 1380, 1541
Bsp19I CCATGG 1 cut(s) 1507
BspACI CCGC 6 cut(s) 48, 50, 112, 702, 1077, 1119
BspANI GGCC 3 cut(s) 53, 642, 733
BspCNI CTCAG 2 cut(s) 576, 1229
BspFNI CGCG 2 cut(s) 50, 704
BspHI TCATGA 1 cut(s) 1140
BspLI GGNNCC 4 cut(s) 857, 988, 1014, 1375
BspPI GGATC 1 cut(s) 1375
BspT104I TTCGAA 1 cut(s) 1557
BspT107I GGYRCC 1 cut(s) 1373
BspTI CTTAAG 1 cut(s) 548
BsrDI GCAATG 2 cut(s) 225, 390
BsrI ACTGG 6 cut(s) 18, 30, 573, 603, 643, 1078
BssECI CCNNGG 5 cut(s) 48, 316, 510, 1291, 1507
BssMI GATC 3 cut(s) 815, 1380, 1541
BssNAI GTATAC 1 cut(s) 1492
BssSI CACGAG 1 cut(s) 1040
BssT1I CCWWGG 2 cut(s) 1291, 1507
Bst1107I GTATAC 1 cut(s) 1492
Bst2BI CACGAG 1 cut(s) 1040
Bst2UI CCWGG 4 cut(s) 99, 260, 317, 942
Bst4CI ACNGT 7 cut(s) 434, 501, 1315, 1345, 1395, 1551, 1588
Bst6I CTCTTC 2 cut(s) 38, 438
BstAFI CTTAAG 1 cut(s) 548
BstBAI YACGTR 2 cut(s) 292, 454
BstBI TTCGAA 1 cut(s) 1557
BstC8I GCNNGC 2 cut(s) 769, 839
BstDEI CTNAG 3 cut(s) 563, 1084, 1216
BstDSI CCRYGG 2 cut(s) 48, 1507
BstEII GGTNACC 1 cut(s) 428
BstF5I GGATG 4 cut(s) 197, 232, 467, 534
BstFNI CGCG 2 cut(s) 50, 704
BstHHI GCGC 1 cut(s) 286
BstKTI GATC 3 cut(s) 818, 1383, 1544
BstMAI GTCTC 2 cut(s) 1217, 1463
BstMBI GATC 3 cut(s) 815, 1380, 1541
BstMCI CGRYCG 1 cut(s) 54
BstMWI GCNNNNNNNGC 7 cut(s) 50, 59, 68, 74, 111, 283, 312
BstNI CCWGG 4 cut(s) 99, 260, 317, 942
BstNSI RCATGY 2 cut(s) 469, 771
BstPI GGTNACC 1 cut(s) 428
BstSCI CCNGG 6 cut(s) 97, 258, 315, 509, 841, 940
BstSFI CTRYAG 1 cut(s) 1190
BstSNI TACGTA 1 cut(s) 292
BstUI CGCG 2 cut(s) 50, 704
BstV1I GCAGC 5 cut(s) 29, 56, 80, 89, 627
BstZ17I GTATAC 1 cut(s) 1492
BstZI CGGCCG 1 cut(s) 51
BsuRI GGCC 3 cut(s) 53, 642, 733
BtgI CCRYGG 2 cut(s) 48, 1507
BtgZI GCGATG 3 cut(s) 223, 420, 822
BtsCI GGATG 4 cut(s) 197, 232, 467, 534
BtsI GCAGTG 1 cut(s) 832
BtsIMutI CAGTG 5 cut(s) 105, 687, 832, 1224, 1350
Cac8I GCNNGC 2 cut(s) 769, 839
CciI TCATGA 1 cut(s) 1140
CfoI GCGC 1 cut(s) 286
Cfr13I GGNCC 1 cut(s) 731
Cfr42I CCGCGG 1 cut(s) 51
Csp6I GTAC 7 cut(s) 289, 451, 973, 1159, 1328, 1374, 1478
CviAII CATG 9 cut(s) 166, 466, 735, 768, 912, 1107, 1141, 1277, 1508
CviQI GTAC 7 cut(s) 289, 451, 973, 1159, 1328, 1374, 1478
DdeI CTNAG 3 cut(s) 563, 1084, 1216
DpnI GATC 3 cut(s) 817, 1382, 1543
DpnII GATC 3 cut(s) 815, 1380, 1541
DraI TTTAAA 1 cut(s) 1165
EaeI YGGCCR 1 cut(s) 51
EagI CGGCCG 1 cut(s) 51
Eam1104I CTCTTC 2 cut(s) 38, 438
EarI CTCTTC 2 cut(s) 38, 438
EclXI CGGCCG 1 cut(s) 51
Eco105I TACGTA 1 cut(s) 292
Eco130I CCWWGG 2 cut(s) 1291, 1507
Eco52I CGGCCG 1 cut(s) 51
Eco57I CTGAAG 2 cut(s) 93, 285
Eco91I GGTNACC 1 cut(s) 428
EcoO65I GGTNACC 1 cut(s) 428
EcoRII CCWGG 4 cut(s) 97, 258, 315, 940
EcoT14I CCWWGG 2 cut(s) 1291, 1507
EcoT22I ATGCAT 2 cut(s) 467, 769
ErhI CCWWGG 2 cut(s) 1291, 1507
FaeI CATG 9 cut(s) 169, 469, 738, 771, 915, 1110, 1144, 1280, 1511
FalI AAGNNNNNCTT 2 cut(s) 937, 969
FaqI GGGAC 1 cut(s) 219
FatI CATG 9 cut(s) 165, 465, 734, 767, 911, 1106, 1140, 1276, 1507
FauI CCCGC 1 cut(s) 709
FauNDI CATATG 1 cut(s) 473
FblI GTMKAC 1 cut(s) 1491
Fnu4HI GCNGC 8 cut(s) 18, 45, 48, 51, 69, 103, 616, 1078
FokI GGATG 4 cut(s) 184, 239, 474, 521
Fsp4HI GCNGC 8 cut(s) 18, 45, 48, 51, 69, 103, 616, 1078
FspBI CTAG 6 cut(s) 378, 540, 1253, 1454, 1487, 1602
GlaI GCGC 1 cut(s) 285
GluI GCNGC 8 cut(s) 18, 45, 48, 51, 69, 103, 616, 1078
HaeIII GGCC 3 cut(s) 53, 642, 733
HapII CCGG 3 cut(s) 459, 510, 842
HhaI GCGC 1 cut(s) 286
Hin1II CATG 9 cut(s) 169, 469, 738, 771, 915, 1110, 1144, 1280, 1511
Hin6I GCGC 1 cut(s) 284
HinP1I GCGC 1 cut(s) 284
HincII GTYRAC 1 cut(s) 247
HindII GTYRAC 1 cut(s) 247
HindIII AAGCTT 1 cut(s) 695
HinfI GANTC 3 cut(s) 706, 1287, 1605
HpaI GTTAAC 1 cut(s) 247
HpaII CCGG 3 cut(s) 459, 510, 842
HphI GGTGA 6 cut(s) 118, 281, 930, 1231, 1456, 1495
Hpy166II GTNNAC 3 cut(s) 247, 648, 1492
Hpy188I TCNGA 3 cut(s) 425, 566, 798
Hpy188III TCNNGA 3 cut(s) 1141, 1365, 1384
Hpy8I GTNNAC 3 cut(s) 247, 648, 1492
HpyAV CCTTC 7 cut(s) 260, 632, 634, 722, 918, 1252, 1292
HpyCH4III ACNGT 7 cut(s) 434, 501, 1315, 1345, 1395, 1551, 1588
HpyCH4IV ACGT 2 cut(s) 291, 453
HpyF10VI GCNNNNNNNGC 7 cut(s) 50, 59, 68, 74, 111, 283, 312
HpyF3I CTNAG 3 cut(s) 563, 1084, 1216
HpySE526I ACGT 2 cut(s) 291, 453
Hsp92II CATG 9 cut(s) 169, 469, 738, 771, 915, 1110, 1144, 1280, 1511
HspAI GCGC 1 cut(s) 284
KpnI GGTACC 1 cut(s) 1377
KspAI GTTAAC 1 cut(s) 247
KspI CCGCGG 1 cut(s) 51
Kzo9I GATC 3 cut(s) 815, 1380, 1541
LmnI GCTCC 3 cut(s) 512, 1050, 1592
Lsp1109I GCAGC 5 cut(s) 29, 56, 80, 89, 627
LweI GCATC 3 cut(s) 264, 397, 452
MaeI CTAG 6 cut(s) 378, 540, 1253, 1454, 1487, 1602
MaeII ACGT 2 cut(s) 291, 453
MalI GATC 3 cut(s) 817, 1382, 1543
MboI GATC 3 cut(s) 815, 1380, 1541
MboII GAAGA 7 cut(s) 25, 68, 455, 647, 686, 1259, 1582
MhlI GDGCHC 3 cut(s) 1047, 1527, 1597
MluCI AATT 8 cut(s) 5, 328, 712, 720, 934, 1101, 1136, 1270
MlyI GAGTC 1 cut(s) 1296
MmeI TCCRAC 1 cut(s) 1078
Mph1103I ATGCAT 2 cut(s) 467, 769
MroXI GAANNNNTTC 1 cut(s) 696
MseI TTAA 6 cut(s) 246, 549, 711, 1164, 1401, 1630
MslI CAYNNNNRTG 3 cut(s) 1040, 1111, 1437
MspA1I CMGCKG 3 cut(s) 50, 71, 114
MspCI CTTAAG 1 cut(s) 548
MspI CCGG 3 cut(s) 459, 510, 842
MspR9I CCNGG 6 cut(s) 99, 260, 317, 511, 843, 942
MvaI CCWGG 4 cut(s) 99, 260, 317, 942
MvnI CGCG 2 cut(s) 50, 704
MwoI GCNNNNNNNGC 7 cut(s) 50, 59, 68, 74, 111, 283, 312
NciI CCSGG 2 cut(s) 511, 843
NcoI CCATGG 1 cut(s) 1507
NdeI CATATG 1 cut(s) 473
NdeII GATC 3 cut(s) 815, 1380, 1541
NlaIII CATG 9 cut(s) 169, 469, 738, 771, 915, 1110, 1144, 1280, 1511
NlaIV GGNNCC 4 cut(s) 857, 988, 1014, 1375
NmuCI GTSAC 6 cut(s) 454, 476, 830, 962, 1501, 1621
NsiI ATGCAT 2 cut(s) 467, 769
NspI RCATGY 2 cut(s) 469, 771
NspV TTCGAA 1 cut(s) 1557
OliI CACNNNNGTG 1 cut(s) 1040
PaeI GCATGC 1 cut(s) 771
PagI TCATGA 1 cut(s) 1140
PcsI WCGNNNNNNNCGW 1 cut(s) 297
PdmI GAANNNNTTC 1 cut(s) 696
PfeI GAWTC 2 cut(s) 706, 1605
PkrI GCNGC 8 cut(s) 19, 46, 49, 52, 70, 104, 617, 1079
PleI GAGTC 1 cut(s) 1295
PpsI GAGTC 1 cut(s) 1295
Ppu21I YACGTR 2 cut(s) 292, 454
PsiI TTATAA 1 cut(s) 1320
Psp6I CCWGG 4 cut(s) 97, 258, 315, 940
PspEI GGTNACC 1 cut(s) 428
PspGI CCWGG 4 cut(s) 97, 258, 315, 940
PspN4I GGNNCC 4 cut(s) 857, 988, 1014, 1375
PspPI GGNCC 1 cut(s) 731
PvuII CAGCTG 1 cut(s) 71
RsaI GTAC 7 cut(s) 290, 452, 974, 1160, 1329, 1375, 1479
RsaNI GTAC 7 cut(s) 289, 451, 973, 1159, 1328, 1374, 1478
RseI CAYNNNNRTG 3 cut(s) 1040, 1111, 1437
SacII CCGCGG 1 cut(s) 51
SaqAI TTAA 6 cut(s) 246, 549, 711, 1164, 1401, 1630
SatI GCNGC 8 cut(s) 18, 45, 48, 51, 69, 103, 616, 1078
Sau3AI GATC 3 cut(s) 815, 1380, 1541
Sau96I GGNCC 1 cut(s) 731
ScaI AGTACT 1 cut(s) 1160
SchI GAGTC 1 cut(s) 1296
ScrFI CCNGG 6 cut(s) 99, 260, 317, 511, 843, 942
SduI GDGCHC 3 cut(s) 1047, 1527, 1597
SfaNI GCATC 3 cut(s) 264, 397, 452
SfcI CTRYAG 1 cut(s) 1190
Sfr303I CCGCGG 1 cut(s) 51
SfuI TTCGAA 1 cut(s) 1557
SgrBI CCGCGG 1 cut(s) 51
SmiMI CAYNNNNRTG 3 cut(s) 1040, 1111, 1437
SmlI CTYRAG 2 cut(s) 87, 548
SmoI CTYRAG 2 cut(s) 87, 548
SnaBI TACGTA 1 cut(s) 292
SpeI ACTAGT 1 cut(s) 1486
SphI GCATGC 1 cut(s) 771
Sse9I AATT 8 cut(s) 5, 328, 712, 720, 934, 1101, 1136, 1270
SsiI CCGC 6 cut(s) 48, 50, 112, 702, 1077, 1119
SspI AATATT 1 cut(s) 1236
SspMI CTAG 6 cut(s) 378, 540, 1253, 1454, 1487, 1602
StyD4I CCNGG 6 cut(s) 97, 258, 315, 509, 841, 940
StyI CCWWGG 2 cut(s) 1291, 1507
TaaI ACNGT 7 cut(s) 434, 501, 1315, 1345, 1395, 1551, 1588
TaiI ACGT 2 cut(s) 294, 456
TaqI TCGA 2 cut(s) 1379, 1557
TasI AATT 8 cut(s) 5, 328, 712, 720, 934, 1101, 1136, 1270
TatI WGTACW 1 cut(s) 1158
TauI GCSGC 3 cut(s) 50, 53, 1080
TfiI GAWTC 2 cut(s) 706, 1605
Tru1I TTAA 6 cut(s) 246, 549, 711, 1164, 1401, 1630
Tru9I TTAA 6 cut(s) 246, 549, 711, 1164, 1401, 1630
TscAI CASTG 5 cut(s) 112, 694, 839, 1224, 1350
TseFI GTSAC 6 cut(s) 454, 476, 830, 962, 1501, 1621
TseI GCWGC 5 cut(s) 17, 44, 68, 102, 615
Tsp45I GTSAC 6 cut(s) 454, 476, 830, 962, 1501, 1621
TspGWI ACGGA 1 cut(s) 1323
TspRI CASTG 5 cut(s) 112, 694, 839, 1224, 1350
Vha464I CTTAAG 1 cut(s) 548
XapI RAATTY 3 cut(s) 934, 1101, 1136
XceI RCATGY 2 cut(s) 469, 771
XmiI GTMKAC 1 cut(s) 1491
XmnI GAANNNNTTC 1 cut(s) 696
XspI CTAG 6 cut(s) 378, 540, 1253, 1454, 1487, 1602
ZrmI AGTACT 1 cut(s) 1160
Zsp2I ATGCAT 2 cut(s) 467, 769
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.