Wall-associated receptor kinase
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| GUB_WAK_bind | PF13947 | 39 - 98 | 1.6e-10 | Wall-associated receptor kinase galacturonan-binding |
| EGF_CA | PF07645 | 311 - 350 | 2.7e-07 | Calcium-binding EGF domain |
| Pkinase | PF00069 | 436 - 703 | 4e-48 | Protein kinase domain |
| PK_Tyr_Ser-Thr | PF07714 | 440 - 706 | 2.4e-50 | Protein tyrosine and serine/threonine kinase |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 182, 2240 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 862 |
| Acc65I | GGTACC | 2 cut(s) | 392, 447 |
| AccB1I | GGYRCC | 2 cut(s) | 392, 447 |
| AccI | GTMKAC | 1 cut(s) | 1781 |
| AccII | CGCG | 1 cut(s) | 770 |
| AciI | CCGC | 5 cut(s) | 92, 451, 1152, 1586, 1931 |
| AclWI | GGATC | 1 cut(s) | 1639 |
| AcoI | YGGCCR | 3 cut(s) | 54, 273, 2052 |
| AcsI | RAATTY | 6 cut(s) | 291, 646, 985, 1237, 1714, 1949 |
| AcuI | CTGAAG | 3 cut(s) | 807, 1178, 1811 |
| AfaI | GTAC | 8 cut(s) | 233, 394, 449, 479, 642, 1009, 1193, 1808 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 19, 558, 587, 642, 2300 |
| AflII | CTTAAG | 1 cut(s) | 1283 |
| AflIII | ACRYGT | 3 cut(s) | 774, 1004, 1010 |
| AgeI | ACCGGT | 1 cut(s) | 247 |
| AjnI | CCWGG | 2 cut(s) | 109, 889 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1079, 1111 |
| AleI | CACNNNNGTG | 1 cut(s) | 1206 |
| Alw21I | GWGCWC | 1 cut(s) | 1677 |
| Alw26I | GTCTC | 2 cut(s) | 1108, 1496 |
| Alw44I | GTGCAC | 1 cut(s) | 1673 |
| AlwI | GGATC | 1 cut(s) | 1639 |
| AoxI | GGCC | 6 cut(s) | 54, 273, 1290, 2052, 2087, 2305 |
| ApaLI | GTGCAC | 1 cut(s) | 1673 |
| ApeKI | GCWGC | 8 cut(s) | 31, 62, 482, 660, 966, 1256, 1691, 2179 |
| ApoI | RAATTY | 6 cut(s) | 291, 646, 985, 1237, 1714, 1949 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1064, 1096 |
| AseI | ATTAAT | 1 cut(s) | 1434 |
| AsiGI | ACCGGT | 1 cut(s) | 247 |
| Asp700I | GAANNNNTTC | 4 cut(s) | 741, 1022, 1193, 1824 |
| Asp718I | GGTACC | 2 cut(s) | 392, 447 |
| AspLEI | GCGC | 1 cut(s) | 823 |
| AspS9I | GGNCC | 5 cut(s) | 245, 958, 1247, 1583, 1813 |
| AsuC2I | CCSGG | 1 cut(s) | 487 |
| AsuHPI | GGTGA | 7 cut(s) | 190, 373, 1337, 1453, 1489, 2234, 2243 |
| AsuII | TTCGAA | 1 cut(s) | 2025 |
| AvaII | GGWCC | 5 cut(s) | 245, 958, 1247, 1583, 1813 |
| AxyI | CCTNAGG | 1 cut(s) | 1926 |
| BaeGI | GKGCMC | 2 cut(s) | 1408, 1677 |
| BalI | TGGCCA | 2 cut(s) | 56, 2054 |
| BanI | GGYRCC | 2 cut(s) | 392, 447 |
| Bbv12I | GWGCWC | 1 cut(s) | 1677 |
| BbvI | GCAGC | 8 cut(s) | 43, 49, 494, 672, 978, 1268, 1703, 2191 |
| BccI | CCATC | 6 cut(s) | 13, 225, 392, 914, 986, 2294 |
| BceAI | ACGGC | 2 cut(s) | 398, 1558 |
| BciT130I | CCWGG | 2 cut(s) | 111, 891 |
| BcnI | CCSGG | 1 cut(s) | 487 |
| BcoDI | GTCTC | 2 cut(s) | 1108, 1496 |
| BfaI | CTAG | 4 cut(s) | 1272, 1487, 1982, 2117 |
| BfmI | CTRYAG | 3 cut(s) | 63, 582, 964 |
| BfrI | CTTAAG | 1 cut(s) | 1283 |
| BglII | AGATCT | 1 cut(s) | 1765 |
| BisI | GCNGC | 8 cut(s) | 32, 63, 483, 661, 967, 1257, 1692, 2180 |
| BlpI | GCTNAGC | 1 cut(s) | 1942 |
| BlsI | GCNGC | 8 cut(s) | 33, 64, 484, 662, 968, 1258, 1693, 2181 |
| BmcAI | AGTACT | 1 cut(s) | 1193 |
| Bme1390I | CCNGG | 3 cut(s) | 111, 487, 891 |
| Bme18I | GGWCC | 5 cut(s) | 245, 958, 1247, 1583, 1813 |
| BmgT120I | GGNCC | 5 cut(s) | 245, 958, 1247, 1583, 1813 |
| BmiI | GGNNCC | 7 cut(s) | 394, 449, 905, 960, 1584, 1758, 1815 |
| BmrFI | CCNGG | 3 cut(s) | 111, 487, 891 |
| BmsI | GCATC | 6 cut(s) | 104, 647, 1653, 2155, 2155, 2274 |
| BoxI | GACNNNNGTC | 1 cut(s) | 20 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1942 |
| Bpu14I | TTCGAA | 1 cut(s) | 2025 |
| BpuEI | CTTGAG | 1 cut(s) | 1236 |
| BpuMI | CCSGG | 1 cut(s) | 487 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1770 |
| BsaI | GGTCTC | 1 cut(s) | 1496 |
| BsaJI | CCNNGG | 5 cut(s) | 270, 356, 898, 1095, 2150 |
| BsaWI | WCCGGW | 3 cut(s) | 12, 247, 2259 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 19, 558, 587, 642, 2300 |
| Bse118I | RCCGGY | 2 cut(s) | 247, 551 |
| Bse1I | ACTGG | 4 cut(s) | 880, 1641, 1710, 2244 |
| Bse21I | CCTNAGG | 1 cut(s) | 1926 |
| Bse3DI | GCAATG | 4 cut(s) | 408, 562, 976, 2115 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1770 |
| BseBI | CCWGG | 2 cut(s) | 111, 891 |
| BseDI | CCNNGG | 5 cut(s) | 270, 356, 898, 1095, 2150 |
| BseGI | GGATG | 5 cut(s) | 119, 217, 1714, 2146, 2265 |
| BseJI | GATNNNNATC | 1 cut(s) | 1770 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 19, 558, 587, 642, 2300 |
| BseMI | GCAATG | 4 cut(s) | 408, 562, 976, 2115 |
| BseMII | CTCAG | 3 cut(s) | 716, 1469, 1917 |
| BseNI | ACTGG | 4 cut(s) | 880, 1641, 1710, 2244 |
| BseRI | GAGGAG | 1 cut(s) | 363 |
| BseSI | GKGCMC | 2 cut(s) | 1408, 1677 |
| BseXI | GCAGC | 8 cut(s) | 43, 49, 494, 672, 978, 1268, 1703, 2191 |
| Bsh1236I | CGCG | 1 cut(s) | 770 |
| Bsh1285I | CGRYCG | 1 cut(s) | 2260 |
| BshFI | GGCC | 6 cut(s) | 56, 275, 1292, 2054, 2089, 2307 |
| BshNI | GGYRCC | 2 cut(s) | 392, 447 |
| BshTI | ACCGGT | 1 cut(s) | 247 |
| BsiEI | CGRYCG | 1 cut(s) | 2260 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1677 |
| BsiSI | CCGG | 5 cut(s) | 13, 248, 486, 552, 2260 |
| BslFI | GGGAC | 4 cut(s) | 128, 1066, 1596, 1810 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 19, 558, 587, 642, 2300 |
| BsmAI | GTCTC | 2 cut(s) | 1108, 1496 |
| BsmFI | GGGAC | 4 cut(s) | 128, 1066, 1596, 1810 |
| BsmI | GAATGC | 1 cut(s) | 947 |
| BsnI | GGCC | 6 cut(s) | 56, 275, 1292, 2054, 2089, 2307 |
| Bso31I | GGTCTC | 1 cut(s) | 1496 |
| Bsp119I | TTCGAA | 1 cut(s) | 2025 |
| Bsp1286I | GDGCHC | 2 cut(s) | 1408, 1677 |
| Bsp1407I | TGTACA | 1 cut(s) | 1007 |
| Bsp143I | GATC | 6 cut(s) | 36, 1458, 1631, 1765, 1984, 1996 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1942 |
| Bsp19I | CCATGG | 2 cut(s) | 356, 2150 |
| Bsp68I | TCGCGA | 1 cut(s) | 770 |
| BspACI | CCGC | 5 cut(s) | 92, 451, 1152, 1586, 1931 |
| BspANI | GGCC | 6 cut(s) | 56, 275, 1292, 2054, 2089, 2307 |
| BspCNI | CTCAG | 3 cut(s) | 717, 1468, 1918 |
| BspFNI | CGCG | 1 cut(s) | 770 |
| BspHI | TCATGA | 2 cut(s) | 1306, 1999 |
| BspLI | GGNNCC | 7 cut(s) | 394, 449, 905, 960, 1584, 1758, 1815 |
| BspMAI | CTGCAG | 3 cut(s) | 67, 586, 968 |
| BspPI | GGATC | 1 cut(s) | 1639 |
| BspT104I | TTCGAA | 1 cut(s) | 2025 |
| BspT107I | GGYRCC | 2 cut(s) | 392, 447 |
| BspTI | CTTAAG | 1 cut(s) | 1283 |
| BspTNI | GGTCTC | 1 cut(s) | 1496 |
| BsrDI | GCAATG | 4 cut(s) | 408, 562, 976, 2115 |
| BsrFI | RCCGGY | 2 cut(s) | 247, 551 |
| BsrGI | TGTACA | 1 cut(s) | 1007 |
| BsrI | ACTGG | 4 cut(s) | 880, 1641, 1710, 2244 |
| BssAI | RCCGGY | 2 cut(s) | 247, 551 |
| BssECI | CCNNGG | 5 cut(s) | 270, 356, 898, 1095, 2150 |
| BssMI | GATC | 6 cut(s) | 36, 1458, 1631, 1765, 1984, 1996 |
| BssT1I | CCWWGG | 4 cut(s) | 356, 898, 1095, 2150 |
| Bst2UI | CCWGG | 2 cut(s) | 111, 891 |
| Bst4CI | ACNGT | 7 cut(s) | 128, 142, 170, 231, 607, 864, 1779 |
| Bst6I | CTCTTC | 3 cut(s) | 102, 1154, 1965 |
| BstAFI | CTTAAG | 1 cut(s) | 1283 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1672 |
| BstAUI | TGTACA | 1 cut(s) | 1007 |
| BstBI | TTCGAA | 1 cut(s) | 2025 |
| BstC8I | GCNNGC | 5 cut(s) | 316, 582, 814, 887, 2184 |
| BstDEI | CTNAG | 5 cut(s) | 725, 1117, 1455, 1926, 1942 |
| BstDSI | CCRYGG | 3 cut(s) | 270, 356, 2150 |
| BstF5I | GGATG | 5 cut(s) | 119, 217, 1714, 2146, 2265 |
| BstFNI | CGCG | 1 cut(s) | 770 |
| BstHHI | GCGC | 1 cut(s) | 823 |
| BstKTI | GATC | 6 cut(s) | 39, 1461, 1634, 1768, 1987, 1999 |
| BstMAI | GTCTC | 2 cut(s) | 1108, 1496 |
| BstMBI | GATC | 6 cut(s) | 36, 1458, 1631, 1765, 1984, 1996 |
| BstMCI | CGRYCG | 1 cut(s) | 2260 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 62, 68, 83, 818, 891, 1672, 2051 |
| BstNI | CCWGG | 2 cut(s) | 111, 891 |
| BstNSI | RCATGY | 2 cut(s) | 1008, 1014 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 20 |
| BstSCI | CCNGG | 3 cut(s) | 109, 485, 889 |
| BstSFI | CTRYAG | 3 cut(s) | 63, 582, 964 |
| BstSLI | GKGCMC | 2 cut(s) | 1408, 1677 |
| BstUI | CGCG | 1 cut(s) | 770 |
| BstV1I | GCAGC | 8 cut(s) | 43, 49, 494, 672, 978, 1268, 1703, 2191 |
| BstX2I | RGATCY | 1 cut(s) | 1765 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 442 |
| BstYI | RGATCY | 1 cut(s) | 1765 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1926 |
| BsuRI | GGCC | 6 cut(s) | 56, 275, 1292, 2054, 2089, 2307 |
| BtgI | CCRYGG | 3 cut(s) | 270, 356, 2150 |
| BtsCI | GGATG | 5 cut(s) | 119, 217, 1714, 2146, 2265 |
| BtsIMutI | CAGTG | 6 cut(s) | 124, 227, 732, 887, 1634, 1838 |
| BtuMI | TCGCGA | 1 cut(s) | 770 |
| Cac8I | GCNNGC | 5 cut(s) | 316, 582, 814, 887, 2184 |
| CciI | TCATGA | 2 cut(s) | 1306, 1999 |
| CfoI | GCGC | 1 cut(s) | 823 |
| Cfr10I | RCCGGY | 2 cut(s) | 247, 551 |
| Cfr13I | GGNCC | 5 cut(s) | 245, 958, 1247, 1583, 1813 |
| CseI | GACGC | 1 cut(s) | 2175 |
| Csp6I | GTAC | 8 cut(s) | 232, 393, 448, 478, 641, 1008, 1192, 1807 |
| CspAI | ACCGGT | 1 cut(s) | 247 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1884, 1919 |
| CviQI | GTAC | 8 cut(s) | 232, 393, 448, 478, 641, 1008, 1192, 1807 |
| DdeI | CTNAG | 5 cut(s) | 725, 1117, 1455, 1926, 1942 |
| DpnI | GATC | 6 cut(s) | 38, 1460, 1633, 1767, 1986, 1998 |
| DpnII | GATC | 6 cut(s) | 36, 1458, 1631, 1765, 1984, 1996 |
| DraI | TTTAAA | 1 cut(s) | 1317 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 862 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 862 |
| EaeI | YGGCCR | 3 cut(s) | 54, 273, 2052 |
| Eam1104I | CTCTTC | 3 cut(s) | 102, 1154, 1965 |
| EarI | CTCTTC | 3 cut(s) | 102, 1154, 1965 |
| EciI | GGCGGA | 1 cut(s) | 1946 |
| Eco130I | CCWWGG | 4 cut(s) | 356, 898, 1095, 2150 |
| Eco147I | AGGCCT | 1 cut(s) | 2089 |
| Eco31I | GGTCTC | 1 cut(s) | 1496 |
| Eco47I | GGWCC | 5 cut(s) | 245, 958, 1247, 1583, 1813 |
| Eco57I | CTGAAG | 3 cut(s) | 807, 1178, 1811 |
| Eco81I | CCTNAGG | 1 cut(s) | 1926 |
| EcoRII | CCWGG | 2 cut(s) | 109, 889 |
| EcoT14I | CCWWGG | 4 cut(s) | 356, 898, 1095, 2150 |
| ErhI | CCWWGG | 4 cut(s) | 356, 898, 1095, 2150 |
| FaqI | GGGAC | 4 cut(s) | 128, 1066, 1596, 1810 |
| FauI | CCCGC | 1 cut(s) | 99 |
| FblI | GTMKAC | 1 cut(s) | 1781 |
| Fnu4HI | GCNGC | 8 cut(s) | 32, 63, 483, 661, 967, 1257, 1692, 2180 |
| FokI | GGATG | 5 cut(s) | 126, 204, 1721, 2133, 2252 |
| Fsp4HI | GCNGC | 8 cut(s) | 32, 63, 483, 661, 967, 1257, 1692, 2180 |
| FspBI | CTAG | 4 cut(s) | 1272, 1487, 1982, 2117 |
| GlaI | GCGC | 1 cut(s) | 822 |
| GluI | GCNGC | 8 cut(s) | 32, 63, 483, 661, 967, 1257, 1692, 2180 |
| HaeIII | GGCC | 6 cut(s) | 56, 275, 1292, 2054, 2089, 2307 |
| HapII | CCGG | 5 cut(s) | 13, 248, 486, 552, 2260 |
| HgaI | GACGC | 1 cut(s) | 2175 |
| HhaI | GCGC | 1 cut(s) | 823 |
| Hin6I | GCGC | 1 cut(s) | 821 |
| HinP1I | GCGC | 1 cut(s) | 821 |
| HindIII | AAGCTT | 1 cut(s) | 1481 |
| HpaII | CCGG | 5 cut(s) | 13, 248, 486, 552, 2260 |
| HphI | GGTGA | 7 cut(s) | 190, 373, 1337, 1453, 1489, 2234, 2243 |
| Hpy166II | GTNNAC | 4 cut(s) | 381, 1348, 1675, 1782 |
| Hpy188I | TCNGA | 7 cut(s) | 628, 991, 1028, 1458, 1735, 1920, 1989 |
| Hpy8I | GTNNAC | 4 cut(s) | 381, 1348, 1675, 1782 |
| Hpy99I | CGWCG | 1 cut(s) | 170 |
| HpyAV | CCTTC | 5 cut(s) | 674, 1282, 1322, 1681, 2222 |
| HpyCH4III | ACNGT | 7 cut(s) | 128, 142, 170, 231, 607, 864, 1779 |
| HpyCH4IV | ACGT | 5 cut(s) | 280, 774, 977, 1857, 2205 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 62, 68, 83, 818, 891, 1672, 2051 |
| HpyF3I | CTNAG | 5 cut(s) | 725, 1117, 1455, 1926, 1942 |
| HpySE526I | ACGT | 5 cut(s) | 280, 774, 977, 1857, 2205 |
| HspAI | GCGC | 1 cut(s) | 821 |
| KpnI | GGTACC | 2 cut(s) | 396, 451 |
| Kzo9I | GATC | 6 cut(s) | 36, 1458, 1631, 1765, 1984, 1996 |
| LmnI | GCTCC | 5 cut(s) | 1742, 1885, 2019, 2079, 2262 |
| Lsp1109I | GCAGC | 8 cut(s) | 43, 49, 494, 672, 978, 1268, 1703, 2191 |
| LweI | GCATC | 6 cut(s) | 104, 647, 1653, 2155, 2155, 2274 |
| MaeI | CTAG | 4 cut(s) | 1272, 1487, 1982, 2117 |
| MaeII | ACGT | 5 cut(s) | 280, 774, 977, 1857, 2205 |
| MaeIII | GTNAC | 9 cut(s) | 173, 367, 500, 620, 1132, 1218, 1853, 1957, 2187 |
| MalI | GATC | 6 cut(s) | 38, 1460, 1633, 1767, 1986, 1998 |
| MboI | GATC | 6 cut(s) | 36, 1458, 1631, 1765, 1984, 1996 |
| MboII | GAAGA | 8 cut(s) | 89, 1171, 1176, 1289, 1621, 1775, 1817, 1982 |
| MflI | RGATCY | 1 cut(s) | 1765 |
| MhlI | GDGCHC | 2 cut(s) | 1408, 1677 |
| MlsI | TGGCCA | 2 cut(s) | 56, 2054 |
| MluNI | TGGCCA | 2 cut(s) | 56, 2054 |
| MlyI | GAGTC | 4 cut(s) | 551, 585, 625, 850 |
| MmeI | TCCRAC | 1 cut(s) | 248 |
| Mox20I | TGGCCA | 2 cut(s) | 56, 2054 |
| MroXI | GAANNNNTTC | 4 cut(s) | 741, 1022, 1193, 1824 |
| MscI | TGGCCA | 2 cut(s) | 56, 2054 |
| MseI | TTAA | 6 cut(s) | 699, 756, 1284, 1316, 1434, 2066 |
| MslI | CAYNNNNRTG | 8 cut(s) | 269, 440, 636, 1009, 1206, 1388, 1470, 1680 |
| Msp20I | TGGCCA | 2 cut(s) | 56, 2054 |
| MspA1I | CMGCKG | 2 cut(s) | 34, 2033 |
| MspCI | CTTAAG | 1 cut(s) | 1283 |
| MspI | CCGG | 5 cut(s) | 13, 248, 486, 552, 2260 |
| MspR9I | CCNGG | 3 cut(s) | 111, 487, 891 |
| Mva1269I | GAATGC | 1 cut(s) | 947 |
| MvaI | CCWGG | 2 cut(s) | 111, 891 |
| MvnI | CGCG | 1 cut(s) | 770 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 62, 68, 83, 818, 891, 1672, 2051 |
| NciI | CCSGG | 1 cut(s) | 487 |
| NcoI | CCATGG | 2 cut(s) | 356, 2150 |
| NdeII | GATC | 6 cut(s) | 36, 1458, 1631, 1765, 1984, 1996 |
| NlaIV | GGNNCC | 7 cut(s) | 394, 449, 905, 960, 1584, 1758, 1815 |
| NmuCI | GTSAC | 4 cut(s) | 367, 500, 1853, 2187 |
| NruI | TCGCGA | 1 cut(s) | 770 |
| NspI | RCATGY | 2 cut(s) | 1008, 1014 |
| NspV | TTCGAA | 1 cut(s) | 2025 |
| OliI | CACNNNNGTG | 1 cut(s) | 1206 |
| PagI | TCATGA | 2 cut(s) | 1306, 1999 |
| PceI | AGGCCT | 1 cut(s) | 2089 |
| PciI | ACATGT | 2 cut(s) | 1004, 1010 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 162 |
| PctI | GAATGC | 1 cut(s) | 947 |
| PdmI | GAANNNNTTC | 4 cut(s) | 741, 1022, 1193, 1824 |
| PfeI | GAWTC | 6 cut(s) | 209, 344, 751, 1975, 1990, 2272 |
| PinAI | ACCGGT | 1 cut(s) | 247 |
| PkrI | GCNGC | 8 cut(s) | 33, 64, 484, 662, 968, 1258, 1693, 2181 |
| PleI | GAGTC | 4 cut(s) | 550, 585, 624, 850 |
| PpsI | GAGTC | 4 cut(s) | 550, 585, 624, 850 |
| PscI | ACATGT | 2 cut(s) | 1004, 1010 |
| PshAI | GACNNNNGTC | 1 cut(s) | 20 |
| PshBI | ATTAAT | 1 cut(s) | 1434 |
| PsiI | TTATAA | 2 cut(s) | 182, 2240 |
| Psp6I | CCWGG | 2 cut(s) | 109, 889 |
| PspGI | CCWGG | 2 cut(s) | 109, 889 |
| PspN4I | GGNNCC | 7 cut(s) | 394, 449, 905, 960, 1584, 1758, 1815 |
| PspPI | GGNCC | 5 cut(s) | 245, 958, 1247, 1583, 1813 |
| PstI | CTGCAG | 3 cut(s) | 67, 586, 968 |
| PsuI | RGATCY | 1 cut(s) | 1765 |
| PvuII | CAGCTG | 2 cut(s) | 34, 2033 |
| RruI | TCGCGA | 1 cut(s) | 770 |
| RsaI | GTAC | 8 cut(s) | 233, 394, 449, 479, 642, 1009, 1193, 1808 |
| RsaNI | GTAC | 8 cut(s) | 232, 393, 448, 478, 641, 1008, 1192, 1807 |
| RseI | CAYNNNNRTG | 8 cut(s) | 269, 440, 636, 1009, 1206, 1388, 1470, 1680 |
| SaqAI | TTAA | 6 cut(s) | 699, 756, 1284, 1316, 1434, 2066 |
| SatI | GCNGC | 8 cut(s) | 32, 63, 483, 661, 967, 1257, 1692, 2180 |
| Sau3AI | GATC | 6 cut(s) | 36, 1458, 1631, 1765, 1984, 1996 |
| Sau96I | GGNCC | 5 cut(s) | 245, 958, 1247, 1583, 1813 |
| ScaI | AGTACT | 1 cut(s) | 1193 |
| SchI | GAGTC | 4 cut(s) | 551, 585, 625, 850 |
| ScrFI | CCNGG | 3 cut(s) | 111, 487, 891 |
| SduI | GDGCHC | 2 cut(s) | 1408, 1677 |
| SfaNI | GCATC | 6 cut(s) | 104, 647, 1653, 2155, 2155, 2274 |
| SfcI | CTRYAG | 3 cut(s) | 63, 582, 964 |
| SfuI | TTCGAA | 1 cut(s) | 2025 |
| SinI | GGWCC | 5 cut(s) | 245, 958, 1247, 1583, 1813 |
| SmiMI | CAYNNNNRTG | 8 cut(s) | 269, 440, 636, 1009, 1206, 1388, 1470, 1680 |
| SmlI | CTYRAG | 2 cut(s) | 1251, 1283 |
| SmoI | CTYRAG | 2 cut(s) | 1251, 1283 |
| SseBI | AGGCCT | 1 cut(s) | 2089 |
| SsiI | CCGC | 5 cut(s) | 92, 451, 1152, 1586, 1931 |
| SspI | AATATT | 1 cut(s) | 1266 |
| SspMI | CTAG | 4 cut(s) | 1272, 1487, 1982, 2117 |
| StuI | AGGCCT | 1 cut(s) | 2089 |
| StyD4I | CCNGG | 3 cut(s) | 109, 485, 889 |
| StyI | CCWWGG | 4 cut(s) | 356, 898, 1095, 2150 |
| TaaI | ACNGT | 7 cut(s) | 128, 142, 170, 231, 607, 864, 1779 |
| TaiI | ACGT | 5 cut(s) | 283, 777, 980, 1860, 2208 |
| TaqI | TCGA | 3 cut(s) | 1661, 1995, 2025 |
| TaqII | GACCGA | 1 cut(s) | 355 |
| TatI | WGTACW | 3 cut(s) | 231, 1007, 1191 |
| TfiI | GAWTC | 6 cut(s) | 209, 344, 751, 1975, 1990, 2272 |
| Tru1I | TTAA | 6 cut(s) | 699, 756, 1284, 1316, 1434, 2066 |
| Tru9I | TTAA | 6 cut(s) | 699, 756, 1284, 1316, 1434, 2066 |
| TscAI | CASTG | 6 cut(s) | 131, 234, 739, 887, 1641, 1845 |
| TseFI | GTSAC | 4 cut(s) | 367, 500, 1853, 2187 |
| TseI | GCWGC | 8 cut(s) | 31, 62, 482, 660, 966, 1256, 1691, 2179 |
| Tsp45I | GTSAC | 4 cut(s) | 367, 500, 1853, 2187 |
| TspGWI | ACGGA | 6 cut(s) | 259, 356, 366, 603, 658, 971 |
| TspRI | CASTG | 6 cut(s) | 131, 234, 739, 887, 1641, 1845 |
| Vha464I | CTTAAG | 1 cut(s) | 1283 |
| VneI | GTGCAC | 1 cut(s) | 1673 |
| VpaK11BI | GGWCC | 5 cut(s) | 245, 958, 1247, 1583, 1813 |
| VspI | ATTAAT | 1 cut(s) | 1434 |
| XapI | RAATTY | 6 cut(s) | 291, 646, 985, 1237, 1714, 1949 |
| XceI | RCATGY | 2 cut(s) | 1008, 1014 |
| XmiI | GTMKAC | 1 cut(s) | 1781 |
| XmnI | GAANNNNTTC | 4 cut(s) | 741, 1022, 1193, 1824 |
| XspI | CTAG | 4 cut(s) | 1272, 1487, 1982, 2117 |
| ZrmI | AGTACT | 1 cut(s) | 1193 |