FvH4_3g03323

serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
OG0000112
Physical Location & Seq
Forward (+)
1802838 .. 1805248
2411 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g03323.t1

Sequence Viewer

Length: 1701 bp
ATGAATGGTTCTGAGTTACAGCACCTTACATGGAGTGATGGAGACCATCGATGGAAGCAAGTCTATGCTGCACCCAAAGTACGGTGTGATTGGTATGCACATTGTGGTGCCAACAGCAAATGTTACCCTGACATATTCGGTCTGTTTGAGTGTGACTGTCTACCCGGCTTTGAACCAAAATCTATCAATGAGTGGAACCAGAATGATGGGTCAGATGGATGTGTGAGTAAACGAAAGGAATTTTCTAAGTGTGGGAATGGAGAAGGGTTTGTGCAGGTGACAAGAGTTAAATATCCAGACACATCAATAGCAGCTCGAGTGGCAGCACGCACGAATAACAAATTGTGTAGGCAGGAGTGCTTGGCAAATTGTTCTTGCACAGCATATATGAGCATTGAAAATGAAAAAGGTGTTGTTGATTGTTGGACATGGTATGATGATTTGATGGATATTCTTGTGTACACAGAGACGGGAAGAGATCTATATGTTCGTGTAGATCAAATGGAATTAGCTGCTGAGAGTGCTGGAAAATCCAAAGGTTTCTTTAAAAGAAGGGGTATGCTTGCCATTCCTATATTCTTTGCTCTGCTAGCATTGGTACTGATCATTATGTGTGCCTGTTGGTGGTGTAAGAAAACAAGGAACACAGCAGAAATTGTGGAGTCAGATGAACTTGAGGAAACTAAGAGGCACCCCGAATTGCAATTTTTCGATTTGAACACATTGATGGCAGCCACAGATAACTTCTCTCCTGTCAATGAACTCGGCCAAGGTGGTTTTGGCTCTGTTTATAAGGGTCAGTTACCAAACGAGCAGAAGGTTGCTGTGAAAAGGTTGTCTAAAACATCAGGACAAGGTACTGAAGAATTCAAAAACGAAGTTGCACTTATAGCAAGACTTCAACATCGCAATCTTGTAAAACTCTTAGGCTGTTGTATTAAGGGGGAAGAACGGATGTTAGTTCTAGAATACATGCCGAACAAAAGCTTGGACTCATTTCTCTTTGATCAGACAAGACGGTCCTTCTTGGATTGGGAAAAGCGCTTTGAAATCATCAACGGGATTGCTCGTGGGATCCTGTATCTTCACCAAGACTCAAGATTGAGGATTATCCATAGAGATCTAAAGACTAGCAATGTTCTTTTAGATGCTGAAATGAACCCGAAAATTTCTGATTTTGGCATGGCAAGAATATTTGACAGGGACCAAGTTCAGGATAAAACCAATCGAGTTGTTGGAACATATGGCTACATGTCACCAGAGTATGCGGTGTTCGGCAGATTTTCTACTAAATCGGATGTGTTTAGTTTTGGGATCATATTGTTAGAGGTTGTGAGTGGCAAAAGAAACAATTATTTTTCTCAAGAGGATCCTTCCATGAACTTGATTAGACATGTTTGGAACCTGTGGAGAGAAGACAGAGTCTTAGAAATTGTGGATTCAACTCTGGAGTTGTATAATTCTGATGAGGTCATGAGATGCATTCAAGTTGCGCTCTTGTGCGTGCAAGAAGAATCAGAGGACCGGCCAGCCATGTCTGCCATTGTTTTCATGTTGAGCGGCGAAACATCTCCTCCATCTCCTAACCAGCCTGCATATGTCATCAGAAGATACTCCGTCACTGATGCTGATCCATCATTAGTACCAACACCATTTTATTCTATAAACGGCTTGACAATAACTGGTGAAGAAGCTCGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
B_lectin DUF3403 PAN_2 Pkinase Pkinase_Tyr S_locus_glycop

Protein Analysis

567

Amino Acids

64.54

Weight (kDa)

5.55

Isoelectric Point (pI)

47.34

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
S_locus_glycop PF00954 5 - 61 7.6e-11 S-locus glycoprotein domain
PAN_2 PF08276 84 - 151 6.6e-16 PAN-like domain
Pkinase PF00069 252 - 514 8.9e-47 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 253 - 517 2.3e-52 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000112)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g03320 FvH4_3g03322 FvH4_3g03323 FvH4_3g03340 FvH4_3g03350 FvH4_3g03351 FvH4_3g03370 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g06140 FvH4_6g00257 FvH4_6g00257 FvH4_6g00270 FvH4_6g00300 FvH4_6g20800 FvH4_6g20800 FvH4_6g20800 FvH4_6g20800 FvH4_6g20800
malus_domestica MD05G1232700.v1.1 MD05G1327700.v1.1 MD05G1327800.v1.1 MD05G1327900.v1.1 MD05G1328000.v1.1 MD05G1328200.v1.1 MD05G1328300.v1.1 MD05G1328500.v1.1 MD05G1332000.v1.1 MD05G1332100.v1.1 MD10G1307600.v1.1 MD10G1307800.v1.1
prunus_persica Prupe.4G031900_v2.0.a1 Prupe.4G032000_v2.0.a1 Prupe.4G032000_v2.0.a1 Prupe.4G032100_v2.0.a1 Prupe.4G032200_v2.0.a1 Prupe.4G032200_v2.0.a1 Prupe.4G032200_v2.0.a1
pyrus_communis pycom05g30180 pycom05g30190 pycom05g30200 pycom05g30210 pycom10g25920 pycom10g25930
rosa_chinensis RchiOBHm_Chr2g0130831 RchiOBHm_Chr2g0132531 RchiOBHm_Chr2g0132541 RchiOBHm_Chr3g0455681 RchiOBHm_Chr3g0476681 RchiOBHm_Chr3g0476761 RchiOBHm_Chr3g0476771 RchiOBHm_Chr3g0476791 RchiOBHm_Chr3g0476801 RchiOBHm_Chr3g0476811 RchiOBHm_Chr4g0413551 RchiOBHm_Chr4g0413561 RchiOBHm_Chr5g0002911 RchiOBHm_Chr5g0005071 RchiOBHm_Chr5g0005101 RchiOBHm_Chr5g0005111 RchiOBHm_Chr5g0005121 RchiOBHm_Chr5g0005131 RchiOBHm_Chr5g0005141 RchiOBHm_Chr5g0005161 RchiOBHm_Chr5g0005171 RchiOBHm_Chr5g0006341 RchiOBHm_Chr5g0046161 RchiOBHm_Chr5g0046171 RchiOBHm_Chr5g0046181 RchiOBHm_Chr5g0046221 RchiOBHm_Chr5g0046231 RchiOBHm_Chr7g0224061 RchiOBHm_Chr7g0224081 RchiOBHm_Chr7g0224101 RchiOBHm_Chr7g0224111 RchiOBHm_Chr7g0224121
rosa_laevigata RLG00000010193 RLG00000019146 RLG00000019148 RLG00000019149 RLG00000019150 RLG00000023750 RLG00000023751 RLG00000023753 RLG00000029486 RLG00000031068 RLG00000031069 RLG00000031284 RLG00000031285 RLG00000031286 RLG00000031289 RLG00000031290 RLG00000031291 RLG00000031292 RLG00000031293 RLG00000031294 RLG00000031295 RLG00000031296 RLG00000031297 RLG00000031363 RLG00000032618 RLG00000032619
rosa_multiflora Rmu_co8147584.1_g000001 Rmu_co8205828.1_g000001 Rmu_co8373645.1_g000001 Rmu_co8407679.1_g000001 Rmu_co8452561.1_g000001 Rmu_sc0001035.1_g000076 Rmu_sc0001884.1_g000026 Rmu_sc0001884.1_g000027 Rmu_sc0001884.1_g000035 Rmu_sc0002157.1_g000026 Rmu_sc0002399.1_g000006 Rmu_sc0002399.1_g000007 Rmu_sc0002883.1_g000010 Rmu_sc0003629.1_g000014 Rmu_sc0003884.1_g000004 Rmu_sc0007865.1_g000005 Rmu_sc0008085.1_g000013 Rmu_sc0008085.1_g000014 Rmu_sc0008085.1_g000016 Rmu_sc0008085.1_g000018 Rmu_sc0008432.1_g000004 Rmu_sc0008714.1_g000002 Rmu_sc0009296.1_g000008 Rmu_sc0009296.1_g000009 Rmu_sc0009296.1_g000011 Rmu_sc0010281.1_g000001 Rmu_sc0010281.1_g000002 Rmu_sc0010714.1_g000011 Rmu_sc0010714.1_g000016 Rmu_sc0011169.1_g000001 Rmu_sc0011169.1_g000007 Rmu_sc0013603.1_g000006 Rmu_sc0020478.1_g000003 Rmu_sc0020478.1_g000007 Rmu_sc0025106.1_g000012 Rmu_sc0032709.1_g000001 Rmu_sc0033028.1_g000001
rosa_roxburghii Rroxscaffold_1G00069570 Rroxscaffold_1G00069610 Rroxscaffold_1G00069620 Rroxscaffold_1G00070480 Rroxscaffold_1G00070490 Rroxscaffold_1G00070500 Rroxscaffold_1G00070510 Rroxscaffold_1G00070520 Rroxscaffold_1G00070530 Rroxscaffold_1G00070540 Rroxscaffold_1G00070550 Rroxscaffold_1G00070590 Rroxscaffold_1G00072950 Rroxscaffold_1G00073080 Rroxscaffold_2G00111810 Rroxscaffold_2G00111820 Rroxscaffold_2G00113530 Rroxscaffold_2G00113870 Rroxscaffold_6G00405010 Rroxscaffold_6G00405020 Rroxscaffold_6G00423590 Rroxscaffold_6G00424100
rosa_rugosa Rorug02G0293200 Rorug02G0293300 Rorug02G0293400 Rorug02G0305900 Rorug02G0305900 Rorug03G0009100 Rorug03G0157000 Rorug03G0157000 Rorug03G0304900 Rorug04G0400500 Rorug04G0415200 Rorug04G0415300 Rorug04G0415400 Rorug04G0415500 Rorug04G0421100 Rorug05G0068000 Rorug05G0068100 Rorug05G0068200 Rorug05G0068500 Rorug05G0224600 Rorug05G0224700
rosa_samantha Rh2CG331700 Rh2CG341600 Rh2CG341700 Rh2DG381200 Rh3DG071200 Rh3DG233400 Rh3DG233500 Rh3DG233600 Rh5AG043100 Rh5CG026000 Rh5CG047700 Rh5CG047800 Rh5CG047900 Rh5CG048000 Rh5CG048100 Rh5CG048300 Rh5CG056500 Rh5CG340500 Rh5CG340700 Rh5CG340800 Rh7AG365000
rosa_wichuraiana Rw0G002360 Rw0G002370 Rw0G012520 Rw0G018230 Rw0G019190 Rw2G027480 Rw2G029150 Rw3G005520 Rw3G005880 Rw3G005890 Rw3G018840 Rw3G018850 Rw3G018870 Rw3G018880 Rw3G020740 Rw5G002190 Rw5G004180 Rw5G004190 Rw5G004890 Rw5G013960 Rw5G014000 Rw5G028610 Rw7G030910 Rw7G030920

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 792
AarI CACCTGC 1 cut(s) 265
AasI GACNNNNNNGTC 1 cut(s) 1018
Acc36I ACCTGC 1 cut(s) 265
AccB1I GGYRCC 2 cut(s) 107, 690
AccBSI CCGCTC 1 cut(s) 1560
AccI GTMKAC 1 cut(s) 160
AciI CCGC 2 cut(s) 1268, 1560
AclWI GGATC 6 cut(s) 1069, 1082, 1322, 1364, 1377, 1625
AcoI YGGCCR 2 cut(s) 766, 1526
AcsI RAATTY 3 cut(s) 239, 866, 1167
AcuI CTGAAG 1 cut(s) 882
AdeI CACNNNGTG 1 cut(s) 104
AfaI GTAC 5 cut(s) 81, 461, 600, 859, 1644
AfeI AGCGCT 1 cut(s) 1043
AfiI CCNNNNNNNGG 3 cut(s) 81, 624, 1213
AflIII ACRYGT 2 cut(s) 1251, 1393
AgsI TTSAA 8 cut(s) 173, 398, 718, 871, 902, 1049, 1443, 1487
AjuI GAANNNNNNNTTGG 2 cut(s) 971, 1003
AluBI AGCT 4 cut(s) 314, 512, 987, 1694
AluI AGCT 4 cut(s) 314, 512, 987, 1694
Alw26I GTCTC 2 cut(s) 36, 461
AlwI GGATC 6 cut(s) 1069, 1082, 1322, 1364, 1377, 1625
Ama87I CYCGRG 1 cut(s) 315
Aor51HI AGCGCT 1 cut(s) 1043
AoxI GGCC 2 cut(s) 766, 1526
ApeKI GCWGC 5 cut(s) 68, 311, 323, 512, 731
ApoI RAATTY 3 cut(s) 239, 866, 1167
AspLEI GCGC 2 cut(s) 1044, 1495
AspS9I GGNCC 3 cut(s) 1020, 1204, 1522
AsuC2I CCSGG 1 cut(s) 165
AsuHPI GGTGA 4 cut(s) 289, 1079, 1248, 1697
AsuNHI GCTAGC 1 cut(s) 589
AvaI CYCGRG 1 cut(s) 315
AvaII GGWCC 3 cut(s) 1020, 1204, 1522
BamHI GGATCC 2 cut(s) 1074, 1369
BanI GGYRCC 2 cut(s) 107, 690
BauI CACGAG 1 cut(s) 1068
BbsI GAAGAC 1 cut(s) 1422
BbvI GCAGC 5 cut(s) 55, 323, 335, 499, 743
BccI CCATC 9 cut(s) 32, 45, 54, 200, 209, 439, 721, 1585, 1642
BceAI ACGGC 1 cut(s) 1684
BclI TGATCA 2 cut(s) 603, 1006
BcnI CCSGG 1 cut(s) 165
BcoDI GTCTC 2 cut(s) 36, 461
BfaI CTAG 3 cut(s) 590, 965, 1131
BfoI RGCGCY 1 cut(s) 1045
BfuAI ACCTGC 1 cut(s) 265
BglII AGATCT 2 cut(s) 478, 1120
BisI GCNGC 6 cut(s) 69, 312, 324, 513, 732, 1561
BlsI GCNGC 6 cut(s) 70, 313, 325, 514, 733, 1562
Bme1390I CCNGG 1 cut(s) 165
Bme18I GGWCC 3 cut(s) 1020, 1204, 1522
BmeT110I CYCGRG 1 cut(s) 315
BmgT120I GGNCC 3 cut(s) 1020, 1204, 1522
BmiI GGNNCC 7 cut(s) 109, 197, 692, 1076, 1205, 1371, 1403
BmrFI CCNGG 1 cut(s) 165
BmsI GCATC 3 cut(s) 1138, 1469, 1615
BmtI GCTAGC 1 cut(s) 593
BpiI GAAGAC 1 cut(s) 1422
BpmI CTGGAG 1 cut(s) 1469
BpuEI CTTGAG 3 cut(s) 695, 1081, 1347
BpuMI CCSGG 1 cut(s) 165
Bsa29I ATCGAT 1 cut(s) 49
BsaBI GATNNNNATC 1 cut(s) 1629
BsaI GGTCTC 1 cut(s) 36
BsaJI CCNNGG 1 cut(s) 769
BsaXI ACNNNNNCTCC 2 cut(s) 1558, 1588
Bsc4I CCNNNNNNNGG 3 cut(s) 81, 624, 1213
Bse118I RCCGGY 1 cut(s) 1524
Bse1I ACTGG 1 cut(s) 1687
Bse3DI GCAATG 1 cut(s) 1141
Bse8I GATNNNNATC 1 cut(s) 1629
BseCI ATCGAT 1 cut(s) 49
BseDI CCNNGG 1 cut(s) 769
BseGI GGATG 3 cut(s) 224, 960, 1303
BseJI GATNNNNATC 1 cut(s) 1629
BseLI CCNNNNNNNGG 3 cut(s) 81, 624, 1213
BseMI GCAATG 1 cut(s) 1141
BseMII CTCAG 1 cut(s) 507
BseNI ACTGG 1 cut(s) 1687
BseRI GAGGAG 1 cut(s) 1563
BseXI GCAGC 5 cut(s) 55, 323, 335, 499, 743
BsgI GTGCAG 2 cut(s) 54, 293
BshFI GGCC 2 cut(s) 768, 1528
BshNI GGYRCC 2 cut(s) 107, 690
BshVI ATCGAT 1 cut(s) 49
BsiHKCI CYCGRG 1 cut(s) 315
BsiSI CCGG 2 cut(s) 165, 1525
BslFI GGGAC 1 cut(s) 1217
BslI CCNNNNNNNGG 3 cut(s) 81, 624, 1213
BsmAI GTCTC 2 cut(s) 36, 461
BsmBI CGTCTC 1 cut(s) 461
BsmFI GGGAC 1 cut(s) 1217
BsmI GAATGC 1 cut(s) 1482
BsnI GGCC 2 cut(s) 768, 1528
Bso31I GGTCTC 1 cut(s) 36
BsoBI CYCGRG 1 cut(s) 315
Bsp1407I TGTACA 1 cut(s) 459
Bsp143I GATC 9 cut(s) 478, 496, 603, 1006, 1074, 1120, 1314, 1369, 1630
BspACI CCGC 2 cut(s) 1268, 1560
BspANI GGCC 2 cut(s) 768, 1528
BspCNI CTCAG 2 cut(s) 4, 508
BspDI ATCGAT 1 cut(s) 49
BspHI TCATGA 1 cut(s) 1473
BspLI GGNNCC 7 cut(s) 109, 197, 692, 1076, 1205, 1371, 1403
BspMI ACCTGC 1 cut(s) 265
BspOI GCTAGC 1 cut(s) 593
BspPI GGATC 6 cut(s) 1069, 1082, 1322, 1364, 1377, 1625
BspT107I GGYRCC 2 cut(s) 107, 690
BspTNI GGTCTC 1 cut(s) 36
BsrBI CCGCTC 1 cut(s) 1560
BsrDI GCAATG 1 cut(s) 1141
BsrFI RCCGGY 1 cut(s) 1524
BsrGI TGTACA 1 cut(s) 459
BsrI ACTGG 1 cut(s) 1687
BssAI RCCGGY 1 cut(s) 1524
BssECI CCNNGG 1 cut(s) 769
BssMI GATC 9 cut(s) 478, 496, 603, 1006, 1074, 1120, 1314, 1369, 1630
BssSI CACGAG 1 cut(s) 1068
BssT1I CCWWGG 1 cut(s) 769
Bst2BI CACGAG 1 cut(s) 1068
Bst4CI ACNGT 3 cut(s) 84, 158, 1020
Bst6I CTCTTC 1 cut(s) 469
BstAUI TGTACA 1 cut(s) 459
BstC8I GCNNGC 6 cut(s) 328, 564, 591, 1505, 1530, 1593
BstDEI CTNAG 6 cut(s) 12, 246, 516, 684, 925, 1426
BstF5I GGATG 3 cut(s) 224, 960, 1303
BstH2I RGCGCY 1 cut(s) 1045
BstHHI GCGC 2 cut(s) 1044, 1495
BstKTI GATC 9 cut(s) 481, 499, 606, 1009, 1077, 1123, 1317, 1372, 1633
BstMAI GTCTC 2 cut(s) 36, 461
BstMBI GATC 9 cut(s) 478, 496, 603, 1006, 1074, 1120, 1314, 1369, 1630
BstMWI GCNNNNNNNGC 5 cut(s) 320, 521, 590, 890, 1538
BstNSI RCATGY 3 cut(s) 976, 1255, 1397
BstSCI CCNGG 1 cut(s) 163
BstV1I GCAGC 5 cut(s) 55, 323, 335, 499, 743
BstV2I GAAGAC 1 cut(s) 1422
BstX2I RGATCY 4 cut(s) 478, 1074, 1120, 1369
BstXI CCANNNNNNTGG 1 cut(s) 206
BstYI RGATCY 4 cut(s) 478, 1074, 1120, 1369
Bsu15I ATCGAT 1 cut(s) 49
BsuRI GGCC 2 cut(s) 768, 1528
BsuTUI ATCGAT 1 cut(s) 49
BtgZI GCGATG 1 cut(s) 890
BtsCI GGATG 3 cut(s) 224, 960, 1303
BtsIMutI CAGTG 1 cut(s) 1620
BveI ACCTGC 1 cut(s) 265
Cac8I GCNNGC 6 cut(s) 328, 564, 591, 1505, 1530, 1593
CciI TCATGA 1 cut(s) 1473
CfoI GCGC 2 cut(s) 1044, 1495
Cfr10I RCCGGY 1 cut(s) 1524
Cfr13I GGNCC 3 cut(s) 1020, 1204, 1522
ClaI ATCGAT 1 cut(s) 49
Csp6I GTAC 5 cut(s) 80, 460, 599, 858, 1643
CviQI GTAC 5 cut(s) 80, 460, 599, 858, 1643
DdeI CTNAG 6 cut(s) 12, 246, 516, 684, 925, 1426
DpnI GATC 9 cut(s) 480, 498, 605, 1008, 1076, 1122, 1316, 1371, 1632
DpnII GATC 9 cut(s) 478, 496, 603, 1006, 1074, 1120, 1314, 1369, 1630
DraI TTTAAA 1 cut(s) 547
DraIII CACNNNGTG 1 cut(s) 104
DrdI GACNNNNNNGTC 1 cut(s) 1018
DseDI GACNNNNNNGTC 1 cut(s) 1018
EaeI YGGCCR 2 cut(s) 766, 1526
Eam1104I CTCTTC 1 cut(s) 469
EarI CTCTTC 1 cut(s) 469
Eco130I CCWWGG 1 cut(s) 769
Eco31I GGTCTC 1 cut(s) 36
Eco47I GGWCC 3 cut(s) 1020, 1204, 1522
Eco47III AGCGCT 1 cut(s) 1043
Eco57I CTGAAG 1 cut(s) 882
Eco88I CYCGRG 1 cut(s) 315
EcoRI GAATTC 1 cut(s) 866
EcoT14I CCWWGG 1 cut(s) 769
EcoT22I ATGCAT 1 cut(s) 1484
ErhI CCWWGG 1 cut(s) 769
Esp3I CGTCTC 1 cut(s) 461
FalI AAGNNNNNCTT 2 cut(s) 870, 902
FaqI GGGAC 1 cut(s) 1217
FauNDI CATATG 2 cut(s) 1243, 1597
FbaI TGATCA 2 cut(s) 603, 1006
FblI GTMKAC 1 cut(s) 160
Fnu4HI GCNGC 6 cut(s) 69, 312, 324, 513, 732, 1561
FokI GGATG 3 cut(s) 231, 967, 1310
Fsp4HI GCNGC 6 cut(s) 69, 312, 324, 513, 732, 1561
FspBI CTAG 3 cut(s) 590, 965, 1131
GlaI GCGC 2 cut(s) 1043, 1494
GluI GCNGC 6 cut(s) 69, 312, 324, 513, 732, 1561
GsuI CTGGAG 1 cut(s) 1469
HaeII RGCGCY 1 cut(s) 1045
HaeIII GGCC 2 cut(s) 768, 1528
HapII CCGG 2 cut(s) 165, 1525
HhaI GCGC 2 cut(s) 1044, 1495
Hin6I GCGC 2 cut(s) 1042, 1493
HinP1I GCGC 2 cut(s) 1042, 1493
HindIII AAGCTT 1 cut(s) 985
HinfI GANTC 6 cut(s) 662, 992, 1094, 1422, 1439, 1514
HpaII CCGG 2 cut(s) 165, 1525
HphI GGTGA 4 cut(s) 289, 1079, 1248, 1697
Hpy166II GTNNAC 4 cut(s) 161, 230, 460, 462
Hpy188I TCNGA 9 cut(s) 13, 214, 667, 1011, 1174, 1297, 1465, 1519, 1607
Hpy188III TCNNGA 8 cut(s) 296, 849, 965, 1098, 1214, 1364, 1448, 1474
Hpy8I GTNNAC 4 cut(s) 161, 230, 460, 462
HpyAV CCTTC 5 cut(s) 257, 546, 811, 1033, 1383
HpyCH4III ACNGT 3 cut(s) 84, 158, 1020
HpyCH4V TGCA 9 cut(s) 71, 98, 274, 378, 703, 884, 1482, 1507, 1595
HpyF10VI GCNNNNNNNGC 5 cut(s) 320, 521, 590, 890, 1538
HpyF3I CTNAG 6 cut(s) 12, 246, 516, 684, 925, 1426
HspAI GCGC 2 cut(s) 1042, 1493
Ksp22I TGATCA 2 cut(s) 603, 1006
Kzo9I GATC 9 cut(s) 478, 496, 603, 1006, 1074, 1120, 1314, 1369, 1630
Lsp1109I GCAGC 5 cut(s) 55, 323, 335, 499, 743
LweI GCATC 3 cut(s) 1138, 1469, 1615
MaeI CTAG 3 cut(s) 590, 965, 1131
MaeIII GTNAC 7 cut(s) 15, 122, 152, 277, 801, 1254, 1618
MalI GATC 9 cut(s) 480, 498, 605, 1008, 1076, 1122, 1316, 1371, 1632
MbiI CCGCTC 1 cut(s) 1560
MboI GATC 9 cut(s) 478, 496, 603, 1006, 1074, 1120, 1314, 1369, 1630
MboII GAAGA 8 cut(s) 486, 875, 959, 1076, 1427, 1523, 1620, 1700
MflI RGATCY 4 cut(s) 478, 1074, 1120, 1369
MlyI GAGTC 4 cut(s) 671, 986, 1088, 1431
MmeI TCCRAC 2 cut(s) 404, 1216
MnlI CCTC 8 cut(s) 670, 681, 1098, 1321, 1360, 1462, 1513, 1584
Mph1103I ATGCAT 1 cut(s) 1484
MseI TTAA 3 cut(s) 288, 546, 939
MslI CAYNNNNRTG 2 cut(s) 105, 725
MspI CCGG 2 cut(s) 165, 1525
MspR9I CCNGG 1 cut(s) 165
Mva1269I GAATGC 1 cut(s) 1482
MwoI GCNNNNNNNGC 5 cut(s) 320, 521, 590, 890, 1538
NciI CCSGG 1 cut(s) 165
NdeI CATATG 2 cut(s) 1243, 1597
NdeII GATC 9 cut(s) 478, 496, 603, 1006, 1074, 1120, 1314, 1369, 1630
NheI GCTAGC 1 cut(s) 589
NlaIV GGNNCC 7 cut(s) 109, 197, 692, 1076, 1205, 1371, 1403
NmeAIII GCCGAG 1 cut(s) 744
NmuCI GTSAC 4 cut(s) 152, 277, 1254, 1618
NsiI ATGCAT 1 cut(s) 1484
NspI RCATGY 3 cut(s) 976, 1255, 1397
PaeR7I CTCGAG 1 cut(s) 315
PagI TCATGA 1 cut(s) 1473
PaqCI CACCTGC 1 cut(s) 265
PciI ACATGT 2 cut(s) 1251, 1393
PctI GAATGC 1 cut(s) 1482
PfeI GAWTC 2 cut(s) 1439, 1514
PflFI GACNNNGTC 1 cut(s) 1421
PkrI GCNGC 6 cut(s) 70, 313, 325, 514, 733, 1562
PleI GAGTC 4 cut(s) 670, 986, 1088, 1430
PpsI GAGTC 4 cut(s) 670, 986, 1088, 1430
PscI ACATGT 2 cut(s) 1251, 1393
PsiI TTATAA 1 cut(s) 792
PspN4I GGNNCC 7 cut(s) 109, 197, 692, 1076, 1205, 1371, 1403
PspPI GGNCC 3 cut(s) 1020, 1204, 1522
PspXI VCTCGAGB 1 cut(s) 315
PsrI GAACNNNNNNTAC 2 cut(s) 1256, 1288
PsuI RGATCY 4 cut(s) 478, 1074, 1120, 1369
PsyI GACNNNGTC 1 cut(s) 1421
RsaI GTAC 5 cut(s) 81, 461, 600, 859, 1644
RsaNI GTAC 5 cut(s) 80, 460, 599, 858, 1643
RseI CAYNNNNRTG 2 cut(s) 105, 725
SaqAI TTAA 3 cut(s) 288, 546, 939
SatI GCNGC 6 cut(s) 69, 312, 324, 513, 732, 1561
Sau3AI GATC 9 cut(s) 478, 496, 603, 1006, 1074, 1120, 1314, 1369, 1630
Sau96I GGNCC 3 cut(s) 1020, 1204, 1522
SchI GAGTC 4 cut(s) 671, 986, 1088, 1431
ScrFI CCNGG 1 cut(s) 165
SfaNI GCATC 3 cut(s) 1138, 1469, 1615
Sfr274I CTCGAG 1 cut(s) 315
SinI GGWCC 3 cut(s) 1020, 1204, 1522
SlaI CTCGAG 1 cut(s) 315
SmiMI CAYNNNNRTG 2 cut(s) 105, 725
SmlI CTYRAG 4 cut(s) 315, 674, 1096, 1362
SmoI CTYRAG 4 cut(s) 315, 674, 1096, 1362
SsiI CCGC 2 cut(s) 1268, 1560
SspI AATATT 1 cut(s) 1194
SspMI CTAG 3 cut(s) 590, 965, 1131
StyD4I CCNGG 1 cut(s) 163
StyI CCWWGG 1 cut(s) 769
TaaI ACNGT 3 cut(s) 84, 158, 1020
TaqI TCGA 5 cut(s) 49, 316, 711, 1228, 1696
TaqII GACCGA 1 cut(s) 128
TatI WGTACW 1 cut(s) 459
TauI GCSGC 1 cut(s) 1563
TfiI GAWTC 2 cut(s) 1439, 1514
Tru1I TTAA 3 cut(s) 288, 546, 939
Tru9I TTAA 3 cut(s) 288, 546, 939
TscAI CASTG 1 cut(s) 1627
TseFI GTSAC 4 cut(s) 152, 277, 1254, 1618
TseI GCWGC 5 cut(s) 68, 311, 323, 512, 731
Tsp45I GTSAC 4 cut(s) 152, 277, 1254, 1618
TspDTI ATGAA 7 cut(s) 17, 417, 684, 774, 1172, 1394, 1540
TspGWI ACGGA 2 cut(s) 967, 1606
TspRI CASTG 1 cut(s) 1627
Tth111I GACNNNGTC 1 cut(s) 1421
VpaK11BI GGWCC 3 cut(s) 1020, 1204, 1522
XapI RAATTY 3 cut(s) 239, 866, 1167
XbaI TCTAGA 1 cut(s) 964
XceI RCATGY 3 cut(s) 976, 1255, 1397
XcmI CCANNNNNNNNNTGG 1 cut(s) 776
XhoI CTCGAG 1 cut(s) 315
XmiI GTMKAC 1 cut(s) 160
XspI CTAG 3 cut(s) 590, 965, 1131
Zsp2I ATGCAT 1 cut(s) 1484
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.