Rw5G004190

divergent subfamily of APPLE domains

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr5
OG0000112
Physical Location & Seq
Forward (+)
4276885 .. 4279184
2300 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw5G004190.1

Sequence Viewer

Length: 1413 bp
ATGAGTGCCACAGCGTGCAAACGTGCATGCTTGAGGAATTGTTCATGCCTTGCGTATTCAAGCCTAGAAATTGAAGGAGGAAGTGGTTGCTTGGCCTGGTATGGTGAATTGATGGAGATTTTATTGTTTGCAGAGGAGGGAAGCGACTTCTATGTTCGAGTGGATTCATCTGAATTAGCTGCCGGAAAATCAAGAGGATTCCTCAGAAGAAAGGGAACACTTGCTATCCTAATTCTGCCAATATTAGTGGCACTGTATCTCATCATGTTTGCTTATCGGTGGCTTATGAAAAAGAGGAAGAGAACAGGTATGAGAGTTTCATCTCCCATGAGAAGAACATGGTGGAGACAATACTCTCACTTTAGTCATTACACCGAGTCTATGGAGGAGAATAAGCTAGAGGACACAACAAACCATCCCGATTTGCAACTTTTCCATCTGAGCACGATAATAGCTGCAACAGAAGACTTCTCTCTGGCTAACAAACTAGGAGAGGGTGGATTTGGCTCTGTTTTTAAGGGTCAGTTATCCAATCAACATATGATTGCTGTGAAAAGATTGTCCATGAGTTCAAGACAAGGCATTGAAGAATTCAAAACTGAAGTTATGCTCATCGCAAAACTTCAACACATGAATCTGGTGAAACTATTAGGATGCTGTATAGAGAAAGAAGAAAAGATGTTAATCTACGAGTATTTGCCAAACAACAGCTTGGACTCTTTTCTTTTCGATCAAACTAGAAGATCCATCTTAGATTGGAGAAAGCGGTTTGACATAGTCATTGGAGTTGCTCGTGGAATATTGTATCTTCATCAAGATATAAGGTTGAGAATTATCCATAGGGATCTAAAAACCAGCAATGTTCTTCTAGATGCTGAAATGAAGCCAAAAGTTTCAGATTTTGGCATGGCCAGAATATTCAATGGGGATCAACAACAACATGAGACGAACAGAGTTGTTGGAACCTATGGTTATATGTCACCGGAGTATGCAGTGTATGGGAAATTTTCAACAAAGTCAAATGTATTTAGTTTTGGGGTCATATTGTTGGAGATTGTAAGTGGCAAGAAAAACAATGCTTCTTATCAGGAGGATCATTCTCGCAATTTGATAGGTCATGTTTGGGATCTATGGACAGAACAGAGAGCCTTAGACATTGTGGATTCATCACTAAAGTCATATCATATTGATGAAGTCCTGAGATGCATTCAAATTGCGCTCCTATGCCTGCAAAAAGATGCAGCTGATAGGCCAGCTATGTCAGAAGTTGTTCTAATGTTGAGTGGTGAAAGAGCTCTTGCATCCCCTCAACGGCCAGCATTCATCTTCAAATGCAATAATGCTGATCCATTGATAGAAGAAGGATCATATTCTACTAATTATCTGACAATGACTGAAACCGTAGGTCGATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
B_lectin DUF3403 PAN_2 Pkinase Pkinase_Tyr S_locus_glycop

Protein Analysis

470

Amino Acids

53.69

Weight (kDa)

8.4

Isoelectric Point (pI)

56.09

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PAN_2 PF08276 3 - 39 3.5e-11 PAN-like domain
PK_Tyr_Ser-Thr PF07714 159 - 425 2.1e-49 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 159 - 424 1e-44 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000112)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g03320 FvH4_3g03322 FvH4_3g03323 FvH4_3g03340 FvH4_3g03350 FvH4_3g03351 FvH4_3g03370 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g06140 FvH4_6g00257 FvH4_6g00257 FvH4_6g00270 FvH4_6g00300 FvH4_6g20800 FvH4_6g20800 FvH4_6g20800 FvH4_6g20800 FvH4_6g20800
malus_domestica MD05G1232700.v1.1 MD05G1327700.v1.1 MD05G1327800.v1.1 MD05G1327900.v1.1 MD05G1328000.v1.1 MD05G1328200.v1.1 MD05G1328300.v1.1 MD05G1328500.v1.1 MD05G1332000.v1.1 MD05G1332100.v1.1 MD10G1307600.v1.1 MD10G1307800.v1.1
prunus_persica Prupe.4G031900_v2.0.a1 Prupe.4G032000_v2.0.a1 Prupe.4G032000_v2.0.a1 Prupe.4G032100_v2.0.a1 Prupe.4G032200_v2.0.a1 Prupe.4G032200_v2.0.a1 Prupe.4G032200_v2.0.a1
pyrus_communis pycom05g30180 pycom05g30190 pycom05g30200 pycom05g30210 pycom10g25920 pycom10g25930
rosa_chinensis RchiOBHm_Chr2g0130831 RchiOBHm_Chr2g0132531 RchiOBHm_Chr2g0132541 RchiOBHm_Chr3g0455681 RchiOBHm_Chr3g0476681 RchiOBHm_Chr3g0476761 RchiOBHm_Chr3g0476771 RchiOBHm_Chr3g0476791 RchiOBHm_Chr3g0476801 RchiOBHm_Chr3g0476811 RchiOBHm_Chr4g0413551 RchiOBHm_Chr4g0413561 RchiOBHm_Chr5g0002911 RchiOBHm_Chr5g0005071 RchiOBHm_Chr5g0005101 RchiOBHm_Chr5g0005111 RchiOBHm_Chr5g0005121 RchiOBHm_Chr5g0005131 RchiOBHm_Chr5g0005141 RchiOBHm_Chr5g0005161 RchiOBHm_Chr5g0005171 RchiOBHm_Chr5g0006341 RchiOBHm_Chr5g0046161 RchiOBHm_Chr5g0046171 RchiOBHm_Chr5g0046181 RchiOBHm_Chr5g0046221 RchiOBHm_Chr5g0046231 RchiOBHm_Chr7g0224061 RchiOBHm_Chr7g0224081 RchiOBHm_Chr7g0224101 RchiOBHm_Chr7g0224111 RchiOBHm_Chr7g0224121
rosa_laevigata RLG00000010193 RLG00000019146 RLG00000019148 RLG00000019149 RLG00000019150 RLG00000023750 RLG00000023751 RLG00000023753 RLG00000029486 RLG00000031068 RLG00000031069 RLG00000031284 RLG00000031285 RLG00000031286 RLG00000031289 RLG00000031290 RLG00000031291 RLG00000031292 RLG00000031293 RLG00000031294 RLG00000031295 RLG00000031296 RLG00000031297 RLG00000031363 RLG00000032618 RLG00000032619
rosa_multiflora Rmu_co8147584.1_g000001 Rmu_co8205828.1_g000001 Rmu_co8373645.1_g000001 Rmu_co8407679.1_g000001 Rmu_co8452561.1_g000001 Rmu_sc0001035.1_g000076 Rmu_sc0001884.1_g000026 Rmu_sc0001884.1_g000027 Rmu_sc0001884.1_g000035 Rmu_sc0002157.1_g000026 Rmu_sc0002399.1_g000006 Rmu_sc0002399.1_g000007 Rmu_sc0002883.1_g000010 Rmu_sc0003629.1_g000014 Rmu_sc0003884.1_g000004 Rmu_sc0007865.1_g000005 Rmu_sc0008085.1_g000013 Rmu_sc0008085.1_g000014 Rmu_sc0008085.1_g000016 Rmu_sc0008085.1_g000018 Rmu_sc0008432.1_g000004 Rmu_sc0008714.1_g000002 Rmu_sc0009296.1_g000008 Rmu_sc0009296.1_g000009 Rmu_sc0009296.1_g000011 Rmu_sc0010281.1_g000001 Rmu_sc0010281.1_g000002 Rmu_sc0010714.1_g000011 Rmu_sc0010714.1_g000016 Rmu_sc0011169.1_g000001 Rmu_sc0011169.1_g000007 Rmu_sc0013603.1_g000006 Rmu_sc0020478.1_g000003 Rmu_sc0020478.1_g000007 Rmu_sc0025106.1_g000012 Rmu_sc0032709.1_g000001 Rmu_sc0033028.1_g000001
rosa_roxburghii Rroxscaffold_1G00069570 Rroxscaffold_1G00069610 Rroxscaffold_1G00069620 Rroxscaffold_1G00070480 Rroxscaffold_1G00070490 Rroxscaffold_1G00070500 Rroxscaffold_1G00070510 Rroxscaffold_1G00070520 Rroxscaffold_1G00070530 Rroxscaffold_1G00070540 Rroxscaffold_1G00070550 Rroxscaffold_1G00070590 Rroxscaffold_1G00072950 Rroxscaffold_1G00073080 Rroxscaffold_2G00111810 Rroxscaffold_2G00111820 Rroxscaffold_2G00113530 Rroxscaffold_2G00113870 Rroxscaffold_6G00405010 Rroxscaffold_6G00405020 Rroxscaffold_6G00423590 Rroxscaffold_6G00424100
rosa_rugosa Rorug02G0293200 Rorug02G0293300 Rorug02G0293400 Rorug02G0305900 Rorug02G0305900 Rorug03G0009100 Rorug03G0157000 Rorug03G0157000 Rorug03G0304900 Rorug04G0400500 Rorug04G0415200 Rorug04G0415300 Rorug04G0415400 Rorug04G0415500 Rorug04G0421100 Rorug05G0068000 Rorug05G0068100 Rorug05G0068200 Rorug05G0068500 Rorug05G0224600 Rorug05G0224700
rosa_samantha Rh2CG331700 Rh2CG341600 Rh2CG341700 Rh2DG381200 Rh3DG071200 Rh3DG233400 Rh3DG233500 Rh3DG233600 Rh5AG043100 Rh5CG026000 Rh5CG047700 Rh5CG047800 Rh5CG047900 Rh5CG048000 Rh5CG048100 Rh5CG048300 Rh5CG056500 Rh5CG340500 Rh5CG340700 Rh5CG340800 Rh7AG365000
rosa_wichuraiana Rw0G002360 Rw0G002370 Rw0G012520 Rw0G018230 Rw0G019190 Rw2G027480 Rw2G029150 Rw3G005520 Rw3G005880 Rw3G005890 Rw3G018840 Rw3G018850 Rw3G018870 Rw3G018880 Rw3G020740 Rw5G002190 Rw5G004180 Rw5G004190 Rw5G004890 Rw5G013960 Rw5G014000 Rw5G028610 Rw7G030910 Rw7G030920

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 766
AclWI GGATC 7 cut(s) 738, 852, 936, 1101, 1134, 1340, 1372
AcoI YGGCCR 2 cut(s) 909, 1313
AcsI RAATTY 2 cut(s) 590, 1004
AcuI CTGAAG 1 cut(s) 621
AdeI CACNNNGTG 1 cut(s) 15
AfiI CCNNNNNNNGG 1 cut(s) 1311
AjnI CCWGG 1 cut(s) 95
AluBI AGCT 7 cut(s) 179, 397, 455, 711, 1244, 1256, 1295
AluI AGCT 7 cut(s) 179, 397, 455, 711, 1244, 1256, 1295
Alw21I GWGCWC 2 cut(s) 446, 1297
Alw26I GTCTC 2 cut(s) 340, 938
AlwI GGATC 7 cut(s) 738, 852, 936, 1101, 1134, 1340, 1372
AoxI GGCC 4 cut(s) 93, 909, 1250, 1313
ApeKI GCWGC 3 cut(s) 179, 455, 1241
ApoI RAATTY 2 cut(s) 590, 1004
Asp700I GAANNNNTTC 1 cut(s) 1269
AspLEI GCGC 1 cut(s) 1219
AsuHPI GGTGA 4 cut(s) 116, 652, 972, 1298
BalI TGGCCA 1 cut(s) 911
BanII GRGCYC 1 cut(s) 1297
BauI CACGAG 1 cut(s) 792
BbsI GAAGAC 1 cut(s) 471
Bbv12I GWGCWC 2 cut(s) 446, 1297
BbvI GCAGC 3 cut(s) 166, 442, 1253
BccI CCATC 4 cut(s) 106, 423, 444, 755
BceAI ACGGC 1 cut(s) 1328
BciT130I CCWGG 1 cut(s) 97
BcoDI GTCTC 2 cut(s) 340, 938
BfaI CTAG 5 cut(s) 65, 398, 488, 738, 869
BisI GCNGC 3 cut(s) 180, 456, 1242
BlsI GCNGC 3 cut(s) 181, 457, 1243
Bme1390I CCNGG 1 cut(s) 97
BmiI GGNNCC 1 cut(s) 964
BmrFI CCNGG 1 cut(s) 97
BmsI GCATC 5 cut(s) 644, 862, 1193, 1228, 1310
BpiI GAAGAC 1 cut(s) 471
BplI GAGNNNNNCTC 2 cut(s) 186, 218
BpuEI CTTGAG 1 cut(s) 52
BsaBI GATNNNNATC 1 cut(s) 683
BsaWI WCCGGW 1 cut(s) 982
Bsc4I CCNNNNNNNGG 1 cut(s) 1311
Bse3DI GCAATG 1 cut(s) 865
Bse8I GATNNNNATC 1 cut(s) 683
BseBI CCWGG 1 cut(s) 97
BseGI GGATG 3 cut(s) 415, 659, 1301
BseJI GATNNNNATC 1 cut(s) 683
BseLI CCNNNNNNNGG 1 cut(s) 1311
BseMI GCAATG 1 cut(s) 865
BseMII CTCAG 3 cut(s) 217, 431, 1190
BseRI GAGGAG 2 cut(s) 149, 401
BseXI GCAGC 3 cut(s) 166, 442, 1253
BshFI GGCC 4 cut(s) 95, 911, 1252, 1315
BsiHKAI GWGCWC 2 cut(s) 446, 1297
BsiSI CCGG 2 cut(s) 183, 983
BslI CCNNNNNNNGG 1 cut(s) 1311
BsmAI GTCTC 2 cut(s) 340, 938
BsmBI CGTCTC 1 cut(s) 938
BsmI GAATGC 2 cut(s) 1206, 1319
BsnI GGCC 4 cut(s) 95, 911, 1252, 1315
Bsp1286I GDGCHC 2 cut(s) 446, 1297
Bsp143I GATC 8 cut(s) 730, 743, 844, 928, 1093, 1126, 1345, 1364
BspACI CCGC 1 cut(s) 766
BspANI GGCC 4 cut(s) 95, 911, 1252, 1315
BspCNI CTCAG 3 cut(s) 216, 432, 1191
BspLI GGNNCC 1 cut(s) 964
BspPI GGATC 7 cut(s) 738, 852, 936, 1101, 1134, 1340, 1372
BsrDI GCAATG 1 cut(s) 865
BssMI GATC 8 cut(s) 730, 743, 844, 928, 1093, 1126, 1345, 1364
BssSI CACGAG 1 cut(s) 792
Bst2BI CACGAG 1 cut(s) 792
Bst2UI CCWGG 1 cut(s) 97
Bst4CI ACNGT 2 cut(s) 255, 1402
Bst6I CTCTTC 1 cut(s) 293
BstC8I GCNNGC 5 cut(s) 16, 28, 1229, 1254, 1317
BstDEI CTNAG 5 cut(s) 203, 440, 751, 1150, 1199
BstF5I GGATG 3 cut(s) 415, 659, 1301
BstHHI GCGC 1 cut(s) 1219
BstKTI GATC 8 cut(s) 733, 746, 847, 931, 1096, 1129, 1348, 1367
BstMAI GTCTC 2 cut(s) 340, 938
BstMBI GATC 8 cut(s) 730, 743, 844, 928, 1093, 1126, 1345, 1364
BstNI CCWGG 1 cut(s) 97
BstNSI RCATGY 1 cut(s) 30
BstSCI CCNGG 1 cut(s) 95
BstV1I GCAGC 3 cut(s) 166, 442, 1253
BstV2I GAAGAC 1 cut(s) 471
BstX2I RGATCY 3 cut(s) 743, 844, 1126
BstYI RGATCY 3 cut(s) 743, 844, 1126
BsuRI GGCC 4 cut(s) 95, 911, 1252, 1315
BtgZI GCGATG 1 cut(s) 598
BtsCI GGATG 3 cut(s) 415, 659, 1301
BtsI GCAGTG 1 cut(s) 999
BtsIMutI CAGTG 2 cut(s) 251, 999
Cac8I GCNNGC 5 cut(s) 16, 28, 1229, 1254, 1317
CfoI GCGC 1 cut(s) 1219
CspCI CAANNNNNGTGG 2 cut(s) 228, 263
DdeI CTNAG 5 cut(s) 203, 440, 751, 1150, 1199
DpnI GATC 8 cut(s) 732, 745, 846, 930, 1095, 1128, 1347, 1366
DpnII GATC 8 cut(s) 730, 743, 844, 928, 1093, 1126, 1345, 1364
DraIII CACNNNGTG 1 cut(s) 15
EaeI YGGCCR 2 cut(s) 909, 1313
Eam1104I CTCTTC 1 cut(s) 293
EarI CTCTTC 1 cut(s) 293
Ecl136II GAGCTC 1 cut(s) 1295
Eco24I GRGCYC 1 cut(s) 1297
Eco53kI GAGCTC 1 cut(s) 1295
Eco57I CTGAAG 1 cut(s) 621
EcoICRI GAGCTC 1 cut(s) 1295
EcoRI GAATTC 1 cut(s) 590
EcoRII CCWGG 1 cut(s) 95
EcoT22I ATGCAT 1 cut(s) 1208
EcoT38I GRGCYC 1 cut(s) 1297
Esp3I CGTCTC 1 cut(s) 938
FauNDI CATATG 1 cut(s) 540
Fnu4HI GCNGC 3 cut(s) 180, 456, 1242
FokI GGATG 3 cut(s) 402, 666, 1288
FriOI GRGCYC 1 cut(s) 1297
Fsp4HI GCNGC 3 cut(s) 180, 456, 1242
FspBI CTAG 5 cut(s) 65, 398, 488, 738, 869
GlaI GCGC 1 cut(s) 1218
GluI GCNGC 3 cut(s) 180, 456, 1242
HaeIII GGCC 4 cut(s) 95, 911, 1252, 1315
HapII CCGG 2 cut(s) 183, 983
HhaI GCGC 1 cut(s) 1219
Hin6I GCGC 1 cut(s) 1217
HinP1I GCGC 1 cut(s) 1217
HinfI GANTC 6 cut(s) 164, 198, 377, 634, 716, 1163
HpaII CCGG 2 cut(s) 183, 983
HphI GGTGA 4 cut(s) 116, 652, 972, 1298
Hpy188I TCNGA 6 cut(s) 172, 206, 441, 898, 1264, 1386
Hpy188III TCNNGA 7 cut(s) 192, 419, 573, 815, 869, 1088, 1198
HpyAV CCTTC 2 cut(s) 68, 1355
HpyCH4III ACNGT 2 cut(s) 255, 1402
HpyCH4IV ACGT 1 cut(s) 22
HpyF3I CTNAG 5 cut(s) 203, 440, 751, 1150, 1199
HpySE526I ACGT 1 cut(s) 22
HspAI GCGC 1 cut(s) 1217
Kzo9I GATC 8 cut(s) 730, 743, 844, 928, 1093, 1126, 1345, 1364
LmnI GCTCC 1 cut(s) 1224
Lsp1109I GCAGC 3 cut(s) 166, 442, 1253
LweI GCATC 5 cut(s) 644, 862, 1193, 1228, 1310
MaeI CTAG 5 cut(s) 65, 398, 488, 738, 869
MaeII ACGT 1 cut(s) 22
MaeIII GTNAC 1 cut(s) 978
MalI GATC 8 cut(s) 732, 745, 846, 930, 1095, 1128, 1347, 1366
MboI GATC 8 cut(s) 730, 743, 844, 928, 1093, 1126, 1345, 1364
MflI RGATCY 3 cut(s) 743, 844, 1126
MhlI GDGCHC 2 cut(s) 446, 1297
MlsI TGGCCA 1 cut(s) 911
MluNI TGGCCA 1 cut(s) 911
MlyI GAGTC 2 cut(s) 386, 710
MmeI TCCRAC 2 cut(s) 940, 1029
Mox20I TGGCCA 1 cut(s) 911
Mph1103I ATGCAT 1 cut(s) 1208
MroXI GAANNNNTTC 1 cut(s) 1269
MscI TGGCCA 1 cut(s) 911
MseI TTAA 2 cut(s) 516, 683
MslI CAYNNNNRTG 1 cut(s) 1188
Msp20I TGGCCA 1 cut(s) 911
MspA1I CMGCKG 1 cut(s) 1244
MspI CCGG 2 cut(s) 183, 983
MspR9I CCNGG 1 cut(s) 97
Mva1269I GAATGC 2 cut(s) 1206, 1319
MvaI CCWGG 1 cut(s) 97
NdeI CATATG 1 cut(s) 540
NdeII GATC 8 cut(s) 730, 743, 844, 928, 1093, 1126, 1345, 1364
NlaIV GGNNCC 1 cut(s) 964
NmuCI GTSAC 1 cut(s) 978
NsiI ATGCAT 1 cut(s) 1208
NspI RCATGY 1 cut(s) 30
PaeI GCATGC 1 cut(s) 30
PctI GAATGC 2 cut(s) 1206, 1319
PdmI GAANNNNTTC 1 cut(s) 1269
PfeI GAWTC 4 cut(s) 164, 198, 634, 1163
PflFI GACNNNGTC 1 cut(s) 776
PkrI GCNGC 3 cut(s) 181, 457, 1243
PleI GAGTC 2 cut(s) 385, 710
PpsI GAGTC 2 cut(s) 385, 710
Psp124BI GAGCTC 1 cut(s) 1297
Psp6I CCWGG 1 cut(s) 95
PspGI CCWGG 1 cut(s) 95
PspN4I GGNNCC 1 cut(s) 964
PsuI RGATCY 3 cut(s) 743, 844, 1126
PsyI GACNNNGTC 1 cut(s) 776
PvuII CAGCTG 1 cut(s) 1244
RseI CAYNNNNRTG 1 cut(s) 1188
SacI GAGCTC 1 cut(s) 1297
SaqAI TTAA 2 cut(s) 516, 683
SatI GCNGC 3 cut(s) 180, 456, 1242
Sau3AI GATC 8 cut(s) 730, 743, 844, 928, 1093, 1126, 1345, 1364
SchI GAGTC 2 cut(s) 386, 710
ScrFI CCNGG 1 cut(s) 97
SduI GDGCHC 2 cut(s) 446, 1297
SfaNI GCATC 5 cut(s) 644, 862, 1193, 1228, 1310
SmiMI CAYNNNNRTG 1 cut(s) 1188
SmlI CTYRAG 1 cut(s) 31
SmoI CTYRAG 1 cut(s) 31
SphI GCATGC 1 cut(s) 30
SsiI CCGC 1 cut(s) 766
SspI AATATT 3 cut(s) 243, 801, 918
SspMI CTAG 5 cut(s) 65, 398, 488, 738, 869
SstI GAGCTC 1 cut(s) 1297
StyD4I CCNGG 1 cut(s) 95
TaaI ACNGT 2 cut(s) 255, 1402
TaiI ACGT 1 cut(s) 25
TaqI TCGA 3 cut(s) 157, 729, 1408
TfiI GAWTC 4 cut(s) 164, 198, 634, 1163
Tru1I TTAA 2 cut(s) 516, 683
Tru9I TTAA 2 cut(s) 516, 683
TscAI CASTG 2 cut(s) 258, 999
TseFI GTSAC 1 cut(s) 978
TseI GCWGC 3 cut(s) 179, 455, 1241
Tsp45I GTSAC 1 cut(s) 978
TspRI CASTG 2 cut(s) 258, 999
Tth111I GACNNNGTC 1 cut(s) 776
XapI RAATTY 2 cut(s) 590, 1004
XbaI TCTAGA 1 cut(s) 868
XceI RCATGY 1 cut(s) 30
XmnI GAANNNNTTC 1 cut(s) 1269
XspI CTAG 5 cut(s) 65, 398, 488, 738, 869
Zsp2I ATGCAT 1 cut(s) 1208
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.