RchiOBHm_Chr2g0130831

serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
OG0000112
Physical Location & Seq
Forward (+)
46890477 .. 46897709
7233 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ50224

Sequence Viewer

Length: 1950 bp
ATGAAAGTTGGGGTGAATTGGAGAACCGGGCTGGAATGGGTTTTATCATCTTGGAAGTCACAAGATGACCCTGGAACTGGGGACTATACCTTAAGGCTCTATCCATATCAGATCGCATCCCCCCAATTTTTTATGTACAAGGGTTTAAATAAGTATTACCGAACTCATCCAGGGCCAACGCCTGGTTTGGTCACTAGTCAGGAGGAAACTTATTATTTCATGAATGAAACCAATGCAATTACAAGAGTAACAGTGACTAATTCTGTGTTGGAGAACCTTCATTGGGATGATGATGGCCTTCAATGGAAGGTAGACTTATCTGCACCGAAGTCCCGGTGTGACGGTTATGGAAAGTGTGGTGCCAACAGCAGATGTAGCCCTGACAACGTTAGTGTGTTTGAGTGTGCATGTTTATCAGGGTATGTGCCTAATTCTATAAGTGATTGGAATCAGAGAAATGGGTCAGGTGGATGCGTGAGTAATCGACTTGGTTTGTTGAAGTGTGGAGATGGAGACGGGTTTGTGAAGGTGGCAAGAGTTAAATATCCAGACACATCGATAGCAGCACGGTTAAAATCAGGAATGAGTGCCAAAGAGTGTGAGCAGGAGTGCCTAAGAAACTGTTCTTGCAAAGCATATTTGAGCACTGAAAATGAAGGGATTGTTGATTGCTTGACATGGTATGATGACTTGATGGACGTTTTAACGTACACAGAGTTTGGACAAGATCTCTACGTTCGTGTGAATGCAACCGTGTTAGCTGCAAATGCCGGAAGATCACAAGGTTTCTTGGAAAGGAGGGGTATGCTGGCCATTCCAATACTGTCTGCTGTGCTGGCATTGGTACTAATCATTTTGCTTCTCTATTGGTGGCGTAAGAAGAACAGGAACACAAAAGGCATAGATTTTGTGGAGGCAGAGGAGCTTGAGGAAGCTCAGAGACACCCCGAATTGCAATTTTTCGATCTTGACACAATAATAGCAGCCACAGACCACTTCTCTCATGTCAATGAACTAGGCCATGGTGGTTTTGGCTCTGTTTTTAAGGGTCAGTTACCAAATGGACAGCAGATTGCTGTGAAAAGATTGTCCAAAACTTCAGGACAAGGGATGGAGGAATTCAAAAATGAAGTTGCACTTATAGCAAGACTTCAACACAGGAATCTTGTGAAACTTTTAGGCTGTTGTATAAAGGGAGAAGAAAGGATGTTAGTCCTAGAATACATGCCTAACAAAAGCTTGGACTCCTTTCTGTTTGATAACAGAAGACGATCCTTCTTGGATTGGAAAAAGCGATTTGAAATTATCAACGGGATTGCTCGTGGGATTTTGTATCTTCACCAAGACTCAAGATTGAGGATTATCCATAGAGACCTAAAAACTAGCAATGTTCTACTAGATGATGAGATGAACCCAAAAGTTTCTGATTTTGGCATGGCTAGAATATTCCATGGGGACAAACTGCAAGATAAGACGAACCGAATTGTCGGAACATATGGCTACATGTCACCAGAGTACGCAGTATTTGGCAGATTTTCCACAAAATCTGATGTCTTTAGTTTTGGGATCATAATGTTGGAGATTGTAAGTGGGCGAAAAAACAATAGTTATGATCTGGAGGATCCTTCCGTGAACTTAATAGGACGTGTTTGGGAGCTCTGGAGAGAAGGTAGAGCATTAGATATTGTTGATTCGACACTGAAGTCATGTCAGCCTAATGAAGTCATGAAATGCATACAAGTTGCGCTCTTGTGTGTACAAGAAGATTCAAAGGACCGACCTGCCATGTCAGCCATTGTTATCATGTTGAGTGGTGAAGCATCTCCTCCATTGCCTAAGCAGCCAGCATTTGTTTACAGAAGAGATTCTGGCGCTGATGTTGATCCATTACTTCCAAACGGATCTTATTCTATAAACGACTTGACAATAACTACAATGGAAGCTCGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
B_lectin DUF3403 PAN_2 Pkinase Pkinase_Tyr S_locus_glycop

Protein Analysis

649

Amino Acids

73.16

Weight (kDa)

6.27

Isoelectric Point (pI)

38.2

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
S_locus_glycop PF00954 68 - 144 3.4e-13 S-locus glycoprotein domain
PAN_2 PF08276 168 - 234 2.5e-17 PAN-like domain
Pkinase PF00069 334 - 599 1.2e-44 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 336 - 601 5.6e-51 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000112)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g03320 FvH4_3g03322 FvH4_3g03323 FvH4_3g03340 FvH4_3g03350 FvH4_3g03351 FvH4_3g03370 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g06140 FvH4_6g00257 FvH4_6g00257 FvH4_6g00270 FvH4_6g00300 FvH4_6g20800 FvH4_6g20800 FvH4_6g20800 FvH4_6g20800 FvH4_6g20800
malus_domestica MD05G1232700.v1.1 MD05G1327700.v1.1 MD05G1327800.v1.1 MD05G1327900.v1.1 MD05G1328000.v1.1 MD05G1328200.v1.1 MD05G1328300.v1.1 MD05G1328500.v1.1 MD05G1332000.v1.1 MD05G1332100.v1.1 MD10G1307600.v1.1 MD10G1307800.v1.1
prunus_persica Prupe.4G031900_v2.0.a1 Prupe.4G032000_v2.0.a1 Prupe.4G032000_v2.0.a1 Prupe.4G032100_v2.0.a1 Prupe.4G032200_v2.0.a1 Prupe.4G032200_v2.0.a1 Prupe.4G032200_v2.0.a1
pyrus_communis pycom05g30180 pycom05g30190 pycom05g30200 pycom05g30210 pycom10g25920 pycom10g25930
rosa_chinensis RchiOBHm_Chr2g0130831 RchiOBHm_Chr2g0132531 RchiOBHm_Chr2g0132541 RchiOBHm_Chr3g0455681 RchiOBHm_Chr3g0476681 RchiOBHm_Chr3g0476761 RchiOBHm_Chr3g0476771 RchiOBHm_Chr3g0476791 RchiOBHm_Chr3g0476801 RchiOBHm_Chr3g0476811 RchiOBHm_Chr4g0413551 RchiOBHm_Chr4g0413561 RchiOBHm_Chr5g0002911 RchiOBHm_Chr5g0005071 RchiOBHm_Chr5g0005101 RchiOBHm_Chr5g0005111 RchiOBHm_Chr5g0005121 RchiOBHm_Chr5g0005131 RchiOBHm_Chr5g0005141 RchiOBHm_Chr5g0005161 RchiOBHm_Chr5g0005171 RchiOBHm_Chr5g0006341 RchiOBHm_Chr5g0046161 RchiOBHm_Chr5g0046171 RchiOBHm_Chr5g0046181 RchiOBHm_Chr5g0046221 RchiOBHm_Chr5g0046231 RchiOBHm_Chr7g0224061 RchiOBHm_Chr7g0224081 RchiOBHm_Chr7g0224101 RchiOBHm_Chr7g0224111 RchiOBHm_Chr7g0224121
rosa_laevigata RLG00000010193 RLG00000019146 RLG00000019148 RLG00000019149 RLG00000019150 RLG00000023750 RLG00000023751 RLG00000023753 RLG00000029486 RLG00000031068 RLG00000031069 RLG00000031284 RLG00000031285 RLG00000031286 RLG00000031289 RLG00000031290 RLG00000031291 RLG00000031292 RLG00000031293 RLG00000031294 RLG00000031295 RLG00000031296 RLG00000031297 RLG00000031363 RLG00000032618 RLG00000032619
rosa_multiflora Rmu_co8147584.1_g000001 Rmu_co8205828.1_g000001 Rmu_co8373645.1_g000001 Rmu_co8407679.1_g000001 Rmu_co8452561.1_g000001 Rmu_sc0001035.1_g000076 Rmu_sc0001884.1_g000026 Rmu_sc0001884.1_g000027 Rmu_sc0001884.1_g000035 Rmu_sc0002157.1_g000026 Rmu_sc0002399.1_g000006 Rmu_sc0002399.1_g000007 Rmu_sc0002883.1_g000010 Rmu_sc0003629.1_g000014 Rmu_sc0003884.1_g000004 Rmu_sc0007865.1_g000005 Rmu_sc0008085.1_g000013 Rmu_sc0008085.1_g000014 Rmu_sc0008085.1_g000016 Rmu_sc0008085.1_g000018 Rmu_sc0008432.1_g000004 Rmu_sc0008714.1_g000002 Rmu_sc0009296.1_g000008 Rmu_sc0009296.1_g000009 Rmu_sc0009296.1_g000011 Rmu_sc0010281.1_g000001 Rmu_sc0010281.1_g000002 Rmu_sc0010714.1_g000011 Rmu_sc0010714.1_g000016 Rmu_sc0011169.1_g000001 Rmu_sc0011169.1_g000007 Rmu_sc0013603.1_g000006 Rmu_sc0020478.1_g000003 Rmu_sc0020478.1_g000007 Rmu_sc0025106.1_g000012 Rmu_sc0032709.1_g000001 Rmu_sc0033028.1_g000001
rosa_roxburghii Rroxscaffold_1G00069570 Rroxscaffold_1G00069610 Rroxscaffold_1G00069620 Rroxscaffold_1G00070480 Rroxscaffold_1G00070490 Rroxscaffold_1G00070500 Rroxscaffold_1G00070510 Rroxscaffold_1G00070520 Rroxscaffold_1G00070530 Rroxscaffold_1G00070540 Rroxscaffold_1G00070550 Rroxscaffold_1G00070590 Rroxscaffold_1G00072950 Rroxscaffold_1G00073080 Rroxscaffold_2G00111810 Rroxscaffold_2G00111820 Rroxscaffold_2G00113530 Rroxscaffold_2G00113870 Rroxscaffold_6G00405010 Rroxscaffold_6G00405020 Rroxscaffold_6G00423590 Rroxscaffold_6G00424100
rosa_rugosa Rorug02G0293200 Rorug02G0293300 Rorug02G0293400 Rorug02G0305900 Rorug02G0305900 Rorug03G0009100 Rorug03G0157000 Rorug03G0157000 Rorug03G0304900 Rorug04G0400500 Rorug04G0415200 Rorug04G0415300 Rorug04G0415400 Rorug04G0415500 Rorug04G0421100 Rorug05G0068000 Rorug05G0068100 Rorug05G0068200 Rorug05G0068500 Rorug05G0224600 Rorug05G0224700
rosa_samantha Rh2CG331700 Rh2CG341600 Rh2CG341700 Rh2DG381200 Rh3DG071200 Rh3DG233400 Rh3DG233500 Rh3DG233600 Rh5AG043100 Rh5CG026000 Rh5CG047700 Rh5CG047800 Rh5CG047900 Rh5CG048000 Rh5CG048100 Rh5CG048300 Rh5CG056500 Rh5CG340500 Rh5CG340700 Rh5CG340800 Rh7AG365000
rosa_wichuraiana Rw0G002360 Rw0G002370 Rw0G012520 Rw0G018230 Rw0G019190 Rw2G027480 Rw2G029150 Rw3G005520 Rw3G005880 Rw3G005890 Rw3G018840 Rw3G018850 Rw3G018870 Rw3G018880 Rw3G020740 Rw5G002190 Rw5G004180 Rw5G004190 Rw5G004890 Rw5G013960 Rw5G014000 Rw5G028610 Rw7G030910 Rw7G030920

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1702
Acc36I ACCTGC 1 cut(s) 1789
AccB1I GGYRCC 1 cut(s) 359
AccB7I CCANNNNNTGG 1 cut(s) 182
AccI GTMKAC 1 cut(s) 312
AclI AACGTT 1 cut(s) 387
AclWI GGATC 6 cut(s) 1266, 1574, 1616, 1629, 1877, 1909
AcoI YGGCCR 1 cut(s) 810
AcsI RAATTY 1 cut(s) 1118
AcuI CTGAAG 2 cut(s) 1083, 1721
AfaI GTAC 5 cut(s) 137, 710, 846, 1517, 1758
AfiI CCNNNNNNNGG 3 cut(s) 77, 182, 283
AflII CTTAAG 1 cut(s) 91
AflIII ACRYGT 2 cut(s) 1503, 1645
AgsI TTSAA 6 cut(s) 302, 499, 1123, 1154, 1301, 1770
AhlI ACTAGT 1 cut(s) 194
AjiI CACGTC 1 cut(s) 1646
AjnI CCWGG 3 cut(s) 70, 169, 181
AluBI AGCT 6 cut(s) 761, 925, 935, 1239, 1657, 1943
AluI AGCT 6 cut(s) 761, 925, 935, 1239, 1657, 1943
Alw21I GWGCWC 2 cut(s) 647, 1659
Alw26I GTCTC 3 cut(s) 507, 934, 1365
AlwI GGATC 6 cut(s) 1266, 1574, 1616, 1629, 1877, 1909
AoxI GGCC 4 cut(s) 173, 295, 810, 1018
ApeKI GCWGC 4 cut(s) 563, 761, 983, 1840
ApoI RAATTY 1 cut(s) 1118
Asp700I GAANNNNTTC 2 cut(s) 622, 1864
AspLEI GCGC 2 cut(s) 1747, 1874
AspS9I GGNCC 2 cut(s) 173, 1774
AsuC2I CCSGG 2 cut(s) 28, 334
AsuHPI GGTGA 4 cut(s) 25, 1331, 1500, 1826
AvaII GGWCC 1 cut(s) 1774
BalI TGGCCA 1 cut(s) 812
BamHI GGATCC 1 cut(s) 1621
BanI GGYRCC 1 cut(s) 359
BanII GRGCYC 1 cut(s) 1659
BauI CACGAG 1 cut(s) 1320
BbsI GAAGAC 1 cut(s) 1273
Bbv12I GWGCWC 2 cut(s) 647, 1659
BbvI GCAGC 4 cut(s) 575, 748, 995, 1852
BccI CCATC 4 cut(s) 287, 503, 688, 1105
BciT130I CCWGG 3 cut(s) 72, 171, 183
BcnI CCSGG 2 cut(s) 28, 334
BcoDI GTCTC 3 cut(s) 507, 934, 1365
BcuI ACTAGT 1 cut(s) 194
BfaI CTAG 6 cut(s) 195, 1016, 1217, 1383, 1397, 1440
BfoI RGCGCY 1 cut(s) 1875
BfrI CTTAAG 1 cut(s) 91
BfuAI ACCTGC 1 cut(s) 1789
BglII AGATCT 1 cut(s) 727
BisI GCNGC 4 cut(s) 564, 762, 984, 1841
BlsI GCNGC 4 cut(s) 565, 763, 985, 1842
Bme1390I CCNGG 5 cut(s) 28, 72, 171, 183, 334
Bme18I GGWCC 1 cut(s) 1774
BmgBI CACGTC 1 cut(s) 1646
BmgT120I GGNCC 2 cut(s) 173, 1774
BmiI GGNNCC 2 cut(s) 361, 1623
BmrFI CCNGG 5 cut(s) 28, 72, 171, 183, 334
BmrI ACTGGG 1 cut(s) 87
BmsI GCATC 3 cut(s) 125, 461, 1829
BmuI ACTGGG 1 cut(s) 87
BpiI GAAGAC 1 cut(s) 1273
BpmI CTGGAG 2 cut(s) 1637, 1681
Bpu10I CCTNAGC 1 cut(s) 1836
BpuEI CTTGAG 2 cut(s) 947, 1333
BpuMI CCSGG 2 cut(s) 28, 334
Bsa29I ATCGAT 1 cut(s) 557
BsaBI GATNNNNATC 2 cut(s) 447, 1881
BsaI GGTCTC 1 cut(s) 1365
BsaJI CCNNGG 4 cut(s) 70, 170, 1021, 1450
BsaXI ACNNNNNCTCC 2 cut(s) 1654, 1684
Bsc4I CCNNNNNNNGG 3 cut(s) 77, 182, 283
Bse1I ACTGG 1 cut(s) 82
Bse3DI GCAATG 2 cut(s) 1393, 1829
Bse8I GATNNNNATC 2 cut(s) 447, 1881
BseBI CCWGG 3 cut(s) 72, 171, 183
BseCI ATCGAT 1 cut(s) 557
BseDI CCNNGG 4 cut(s) 70, 170, 1021, 1450
BseGI GGATG 6 cut(s) 116, 166, 292, 476, 1116, 1212
BseJI GATNNNNATC 2 cut(s) 447, 1881
BseLI CCNNNNNNNGG 3 cut(s) 77, 182, 283
BseMI GCAATG 2 cut(s) 1393, 1829
BseMII CTCAG 1 cut(s) 950
BseNI ACTGG 1 cut(s) 82
BseRI GAGGAG 2 cut(s) 935, 1815
BseXI GCAGC 4 cut(s) 575, 748, 995, 1852
BsgI GTGCAG 1 cut(s) 306
BshFI GGCC 4 cut(s) 175, 297, 812, 1020
BshNI GGYRCC 1 cut(s) 359
BshVI ATCGAT 1 cut(s) 557
BsiHKAI GWGCWC 2 cut(s) 647, 1659
BsiSI CCGG 3 cut(s) 27, 334, 771
BslFI GGGAC 3 cut(s) 95, 316, 1469
BslI CCNNNNNNNGG 3 cut(s) 77, 182, 283
BsmAI GTCTC 3 cut(s) 507, 934, 1365
BsmBI CGTCTC 1 cut(s) 507
BsmFI GGGAC 3 cut(s) 95, 316, 1469
BsmI GAATGC 1 cut(s) 751
BsnI GGCC 4 cut(s) 175, 297, 812, 1020
Bso31I GGTCTC 1 cut(s) 1365
Bsp1286I GDGCHC 2 cut(s) 647, 1659
Bsp1407I TGTACA 2 cut(s) 135, 1756
Bsp19I CCATGG 2 cut(s) 1021, 1450
BspANI GGCC 4 cut(s) 175, 297, 812, 1020
BspCNI CTCAG 1 cut(s) 949
BspDI ATCGAT 1 cut(s) 557
BspHI TCATGA 2 cut(s) 219, 1725
BspLI GGNNCC 2 cut(s) 361, 1623
BspMI ACCTGC 1 cut(s) 1789
BspPI GGATC 6 cut(s) 1266, 1574, 1616, 1629, 1877, 1909
BspT107I GGYRCC 1 cut(s) 359
BspTI CTTAAG 1 cut(s) 91
BspTNI GGTCTC 1 cut(s) 1365
BsrDI GCAATG 2 cut(s) 1393, 1829
BsrGI TGTACA 2 cut(s) 135, 1756
BsrI ACTGG 1 cut(s) 82
BssECI CCNNGG 4 cut(s) 70, 170, 1021, 1450
BssSI CACGAG 1 cut(s) 1320
BssT1I CCWWGG 2 cut(s) 1021, 1450
Bst2BI CACGAG 1 cut(s) 1320
Bst2UI CCWGG 3 cut(s) 72, 171, 183
Bst4CI ACNGT 6 cut(s) 253, 344, 570, 623, 754, 825
Bst6I CTCTTC 1 cut(s) 1855
BstAFI CTTAAG 1 cut(s) 91
BstAUI TGTACA 2 cut(s) 135, 1756
BstC8I GCNNGC 3 cut(s) 810, 837, 1845
BstDEI CTNAG 3 cut(s) 614, 936, 1836
BstDSI CCRYGG 2 cut(s) 1021, 1450
BstF5I GGATG 6 cut(s) 116, 166, 292, 476, 1116, 1212
BstH2I RGCGCY 1 cut(s) 1875
BstHHI GCGC 2 cut(s) 1747, 1874
BstMAI GTCTC 3 cut(s) 507, 934, 1365
BstMWI GCNNNNNNNGC 6 cut(s) 375, 767, 836, 1142, 1790, 1840
BstNI CCWGG 3 cut(s) 72, 171, 183
BstNSI RCATGY 3 cut(s) 411, 1228, 1507
BstSCI CCNGG 5 cut(s) 26, 70, 169, 181, 332
BstV1I GCAGC 4 cut(s) 575, 748, 995, 1852
BstV2I GAAGAC 1 cut(s) 1273
BstX2I RGATCY 3 cut(s) 727, 1621, 1901
BstYI RGATCY 3 cut(s) 727, 1621, 1901
Bsu15I ATCGAT 1 cut(s) 557
BsuRI GGCC 4 cut(s) 175, 297, 812, 1020
BsuTUI ATCGAT 1 cut(s) 557
BtgI CCRYGG 2 cut(s) 1021, 1450
BtrI CACGTC 1 cut(s) 1646
BtsCI GGATG 6 cut(s) 116, 166, 292, 476, 1116, 1212
BtsIMutI CAGTG 3 cut(s) 258, 645, 1697
BveI ACCTGC 1 cut(s) 1789
Cac8I GCNNGC 3 cut(s) 810, 837, 1845
CciI TCATGA 2 cut(s) 219, 1725
CfoI GCGC 2 cut(s) 1747, 1874
Cfr13I GGNCC 2 cut(s) 173, 1774
ClaI ATCGAT 1 cut(s) 557
Csp6I GTAC 5 cut(s) 136, 709, 845, 1516, 1757
CviQI GTAC 5 cut(s) 136, 709, 845, 1516, 1757
DdeI CTNAG 3 cut(s) 614, 936, 1836
DraI TTTAAA 1 cut(s) 147
DrdI GACNNNNNNGTC 1 cut(s) 1702
DseDI GACNNNNNNGTC 1 cut(s) 1702
EaeI YGGCCR 1 cut(s) 810
Eam1104I CTCTTC 1 cut(s) 1855
EarI CTCTTC 1 cut(s) 1855
Ecl136II GAGCTC 1 cut(s) 1657
Eco130I CCWWGG 2 cut(s) 1021, 1450
Eco24I GRGCYC 1 cut(s) 1659
Eco31I GGTCTC 1 cut(s) 1365
Eco47I GGWCC 1 cut(s) 1774
Eco53kI GAGCTC 1 cut(s) 1657
Eco57I CTGAAG 2 cut(s) 1083, 1721
EcoICRI GAGCTC 1 cut(s) 1657
EcoRI GAATTC 1 cut(s) 1118
EcoRII CCWGG 3 cut(s) 70, 169, 181
EcoT14I CCWWGG 2 cut(s) 1021, 1450
EcoT22I ATGCAT 1 cut(s) 1736
EcoT38I GRGCYC 1 cut(s) 1659
ErhI CCWWGG 2 cut(s) 1021, 1450
Esp3I CGTCTC 1 cut(s) 507
FalI AAGNNNNNCTT 4 cut(s) 299, 331, 1122, 1154
FaqI GGGAC 3 cut(s) 95, 316, 1469
FauNDI CATATG 1 cut(s) 1495
FblI GTMKAC 1 cut(s) 312
Fnu4HI GCNGC 4 cut(s) 564, 762, 984, 1841
FokI GGATG 6 cut(s) 103, 153, 299, 483, 1123, 1219
FriOI GRGCYC 1 cut(s) 1659
Fsp4HI GCNGC 4 cut(s) 564, 762, 984, 1841
FspBI CTAG 6 cut(s) 195, 1016, 1217, 1383, 1397, 1440
GlaI GCGC 2 cut(s) 1746, 1873
GluI GCNGC 4 cut(s) 564, 762, 984, 1841
GsuI CTGGAG 2 cut(s) 1637, 1681
HaeII RGCGCY 1 cut(s) 1875
HaeIII GGCC 4 cut(s) 175, 297, 812, 1020
HapII CCGG 3 cut(s) 27, 334, 771
HhaI GCGC 2 cut(s) 1747, 1874
Hin6I GCGC 2 cut(s) 1745, 1872
HinP1I GCGC 2 cut(s) 1745, 1872
HindIII AAGCTT 1 cut(s) 1237
HinfI GANTC 7 cut(s) 448, 1162, 1244, 1346, 1691, 1766, 1865
HpaII CCGG 3 cut(s) 27, 334, 771
HphI GGTGA 4 cut(s) 25, 1331, 1500, 1826
Hpy166II GTNNAC 5 cut(s) 313, 711, 1633, 1757, 1855
Hpy188I TCNGA 6 cut(s) 111, 453, 939, 1426, 1490, 1549
Hpy8I GTNNAC 5 cut(s) 313, 711, 1633, 1757, 1855
HpyAV CCTTC 8 cut(s) 287, 301, 308, 520, 650, 1285, 1635, 1661
HpyCH4III ACNGT 6 cut(s) 253, 344, 570, 623, 754, 825
HpyCH4IV ACGT 5 cut(s) 387, 699, 707, 735, 1645
HpyF10VI GCNNNNNNNGC 6 cut(s) 375, 767, 836, 1142, 1790, 1840
HpyF3I CTNAG 3 cut(s) 614, 936, 1836
HpySE526I ACGT 5 cut(s) 387, 699, 707, 735, 1645
HspAI GCGC 2 cut(s) 1745, 1872
LmnI GCTCC 2 cut(s) 922, 1654
Lsp1109I GCAGC 4 cut(s) 575, 748, 995, 1852
LweI GCATC 3 cut(s) 125, 461, 1829
MaeI CTAG 6 cut(s) 195, 1016, 1217, 1383, 1397, 1440
MaeII ACGT 5 cut(s) 387, 699, 707, 735, 1645
MaeIII GTNAC 7 cut(s) 57, 190, 247, 253, 338, 1053, 1506
MboII GAAGA 7 cut(s) 786, 892, 1211, 1278, 1328, 1775, 1872
MflI RGATCY 3 cut(s) 727, 1621, 1901
MhlI GDGCHC 2 cut(s) 647, 1659
MlsI TGGCCA 1 cut(s) 812
MluNI TGGCCA 1 cut(s) 812
MlyI GAGTC 2 cut(s) 1238, 1340
MmeI TCCRAC 3 cut(s) 249, 1468, 1557
MnlI CCTC 9 cut(s) 196, 792, 907, 913, 922, 1108, 1350, 1612, 1836
Mox20I TGGCCA 1 cut(s) 812
Mph1103I ATGCAT 1 cut(s) 1736
MroXI GAANNNNTTC 2 cut(s) 622, 1864
MscI TGGCCA 1 cut(s) 812
MseI TTAA 7 cut(s) 92, 146, 540, 572, 704, 1044, 1637
MslI CAYNNNNRTG 2 cut(s) 285, 1008
Msp20I TGGCCA 1 cut(s) 812
MspCI CTTAAG 1 cut(s) 91
MspI CCGG 3 cut(s) 27, 334, 771
MspR9I CCNGG 5 cut(s) 28, 72, 171, 183, 334
Mva1269I GAATGC 1 cut(s) 751
MvaI CCWGG 3 cut(s) 72, 171, 183
MwoI GCNNNNNNNGC 6 cut(s) 375, 767, 836, 1142, 1790, 1840
NciI CCSGG 2 cut(s) 28, 334
NcoI CCATGG 2 cut(s) 1021, 1450
NdeI CATATG 1 cut(s) 1495
NlaIV GGNNCC 2 cut(s) 361, 1623
NmuCI GTSAC 5 cut(s) 57, 190, 253, 338, 1506
NsiI ATGCAT 1 cut(s) 1736
NspI RCATGY 3 cut(s) 411, 1228, 1507
PagI TCATGA 2 cut(s) 219, 1725
PciI ACATGT 1 cut(s) 1503
PctI GAATGC 1 cut(s) 751
PdmI GAANNNNTTC 2 cut(s) 622, 1864
PfeI GAWTC 5 cut(s) 448, 1162, 1691, 1766, 1865
PflMI CCANNNNNTGG 1 cut(s) 182
PkrI GCNGC 4 cut(s) 565, 763, 985, 1842
PleI GAGTC 2 cut(s) 1238, 1340
PpsI GAGTC 2 cut(s) 1238, 1340
PscI ACATGT 1 cut(s) 1503
Psp124BI GAGCTC 1 cut(s) 1659
Psp1406I AACGTT 1 cut(s) 387
Psp6I CCWGG 3 cut(s) 70, 169, 181
PspGI CCWGG 3 cut(s) 70, 169, 181
PspN4I GGNNCC 2 cut(s) 361, 1623
PspPI GGNCC 2 cut(s) 173, 1774
PsuI RGATCY 3 cut(s) 727, 1621, 1901
RsaI GTAC 5 cut(s) 137, 710, 846, 1517, 1758
RsaNI GTAC 5 cut(s) 136, 709, 845, 1516, 1757
RseI CAYNNNNRTG 2 cut(s) 285, 1008
SacI GAGCTC 1 cut(s) 1659
SaqAI TTAA 7 cut(s) 92, 146, 540, 572, 704, 1044, 1637
SatI GCNGC 4 cut(s) 564, 762, 984, 1841
Sau96I GGNCC 2 cut(s) 173, 1774
SchI GAGTC 2 cut(s) 1238, 1340
ScrFI CCNGG 5 cut(s) 28, 72, 171, 183, 334
SduI GDGCHC 2 cut(s) 647, 1659
SfaNI GCATC 3 cut(s) 125, 461, 1829
SinI GGWCC 1 cut(s) 1774
SmiMI CAYNNNNRTG 2 cut(s) 285, 1008
SmlI CTYRAG 3 cut(s) 91, 926, 1348
SmoI CTYRAG 3 cut(s) 91, 926, 1348
SpeI ACTAGT 1 cut(s) 194
SspI AATATT 1 cut(s) 1446
SspMI CTAG 6 cut(s) 195, 1016, 1217, 1383, 1397, 1440
SstI GAGCTC 1 cut(s) 1659
StyD4I CCNGG 5 cut(s) 26, 70, 169, 181, 332
StyI CCWWGG 2 cut(s) 1021, 1450
TaaI ACNGT 6 cut(s) 253, 344, 570, 623, 754, 825
TaiI ACGT 5 cut(s) 390, 702, 710, 738, 1648
TaqI TCGA 5 cut(s) 484, 557, 963, 1694, 1945
TaqII GACCGA 1 cut(s) 1791
TatI WGTACW 2 cut(s) 135, 1756
TfiI GAWTC 5 cut(s) 448, 1162, 1691, 1766, 1865
Tru1I TTAA 7 cut(s) 92, 146, 540, 572, 704, 1044, 1637
Tru9I TTAA 7 cut(s) 92, 146, 540, 572, 704, 1044, 1637
TscAI CASTG 3 cut(s) 258, 652, 1704
TseFI GTSAC 5 cut(s) 57, 190, 253, 338, 1506
TseI GCWGC 4 cut(s) 563, 761, 983, 1840
Tsp45I GTSAC 5 cut(s) 57, 190, 253, 338, 1506
TspGWI ACGGA 2 cut(s) 1618, 1914
TspRI CASTG 3 cut(s) 258, 652, 1704
Van91I CCANNNNNTGG 1 cut(s) 182
Vha464I CTTAAG 1 cut(s) 91
VpaK11BI GGWCC 1 cut(s) 1774
XapI RAATTY 1 cut(s) 1118
XceI RCATGY 3 cut(s) 411, 1228, 1507
XcmI CCANNNNNNNNNTGG 1 cut(s) 1028
XmiI GTMKAC 1 cut(s) 312
XmnI GAANNNNTTC 2 cut(s) 622, 1864
XspI CTAG 6 cut(s) 195, 1016, 1217, 1383, 1397, 1440
Zsp2I ATGCAT 1 cut(s) 1736
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.