Rw2G029150

serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr2
Physical Location & Seq
Forward (+)
46924371 .. 46945224
20854 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw2G029150.1

Sequence Viewer

Length: 4434 bp
ATGTCTAAGGAAAAAATATATTTGCATGGACCATTTGTTAACCAGAAACAGGAAAAGCTCCTTAATTTCAAGTTAGTAATGCACCTGGTTGTATGGGTTGCAAACAGGAACAATCCCATCAGTGATACCTCTGGTGTCCTCACAATAAGCAGGTATGGAGTACTAGTTCTCTATGCTCATAACAGGGAGAGTATTCCTATGTGGTACACAAATGTGTCGCAGTTGGTCCAAAACTCAAGCACTTTATCTGCACAGCTTTTAGATACAGGAAATTTAGTTATGTTCCAGGATGATAAAACTAGGATATTTATAGGGAAAAGTTTTGATTATCTTACAGATACTGTAATCCCAGAATGGAATATAACATCTTGGAAGTCACAAGATGACCCTGAAGCCGGGGACTATACCAATAGGCTATATTCAAATCAAACTGCAATCCCTGAATTTTTTATATACAAAGGTACATGCCGGTATTGGAGAAGTGATTATTCCGGGATTAATTTTGTCAGTAACCAGTACAATACTAATATGTGCCCTGACAATACCAAGATGTTTGAGTATGATTTACCAGGATATGAACTGAAGTCTTTAAATGATTGGAATCAGAGAAATGGGTCGGATGGATGTGTGAGTAAAAGGTTTGTGCAGATGGTAAAAGTCAAGGAGCCAGATACATCAAAAGCTGCAAGGTTGGAAAGAATTATGAGTGCCAAAAAGTGCAAGCAGCAGTGCTTAAGAAATTGTTCTTGCACAGCATATATGAGCATGGACATTGAAGGGAGCATTGATTGCTTGACACGGTATGGTGAGTTTCTGGACATCACAGAGCACACTGCAGTGGGACGAGATCTTTATGTTCATTTAGATCATATGGAGTCGGCTGAGAATGCCAGAAAATCAAAAGGCTTCTTTGGAAGGAGGGTGATGCTGAGTGTTCCAATATTGTCTGTTCTTCTGCCATTGGTACTGGTCATTGGCTTAAGAGGAAAACTGAAGTTTTTTTTTTTTTTTGAATTTTATTTTTTTGTAATCAACGATTTTACAGAGGCCGATGAACTTGAGGAAACGAGGAGACACCCAGAATTACAGTTTTTCAATCTGAACACACTAATAGATGCCACGGAAAACTTCTCTCCAGACAATGAACTTTTTTGGCTCAGAGAAGAAAGGATGTTAATCCTGGAATACATACCAAACAATAGCTTGGACTCCTTCCTTTTTGACTGGATTATCCAAAGAGATCTGAAAACCAGCAATGTTCTTCTAGATGCTGAAATGAACCCAAAAATTTCATATTTTGGCAGGGAAAGAATATTCCATGGCGACCAACTCCTGGAGAAGACAAACAGAGGATTACAAAGTGCTAGTTCTAATGTTACAAGGAATACCAATCCGTGTAGGATTGGGAAATCTAGAACCTTCTCTCCTATTCCTATTCCTAGTTTGATAAGGCACACTAAACTTGATTTTCCTTCAACAGTATTTGAATTTTTTTTCATAAAATTCGATGTCTTCAGTTTTGGGATCATACAATTGGAGATTCTAAGTGGCAAGAAAAGTAGCGGTCTTCAAGAGGATCATTCCATGAACTTGATAGGATATATAGAAGACAGAGCCTTAGAAATGTTGGACTCATCACTAGAGTCATATCAGCCTAATGAAGTGTCACGATGTATTCAAGTTGGGTTGTTGGCTGTTTTTTTCAAGTTAAGCGGTGACGCGTCTCCACCATCTCCTCAACAACCAGCATTCGTCTTCAAAAATCTTTCTAGCCATGATGCCGATCCATTGATTCCAAAAGGATTATATTCTGTGAATAGCTTGACAATTAGTAAAGAGGAAGGTTGTTCTTGTCATCTCAGACTAGACAAAATGACCCTATTTGGAAAAGTTCAGAGTAGAAGAATTGCCCAGAAGATCAACATAATGCCACTCATCTCATTTATCACCAGCTCAAGTATGAAAATGAGAAAAAAGATGCCATTGGTTCATTCCTACAGAATTGAAAATGCCGAGAAAATGGTTTTGAAAGCTCTGATTCTCTTCCTCCTCTTTCAATTATGCACTTCCAGGGACACCATGAGAGGGAAAGAAGAACAATTGAAGGATGTTGATGGTGACTATTTAGTGTCCAAAGAAAACAAGTTTGAATTGGGTTTCTTCAGCCCCGGAAATTCTAGCAACCGGTATGTTGGAGTCTGGTATTCTCAGACTAGAGTATCTAATAAAACAGTGGTGTGGGTTGCAAACAGGAACAATCCTATCAATGATACCTCTGGTGTGCTCACAATAAACAGGTATGGAGAACTAGTCCTTTATGCTCATAACATGGAAAGCACTCCTATTTGGTCTACTAACGTGTCGCGGTCGGTTCAAAATGTTAACACAAGCACTTCATCTACACAGCTTTTAGATACAGGAAATTTAGTTGTGTTCCAGGATGATAAAGATGAAATCTTTATATGGCAAAGTTTTGATCATCCTATAGATACTTTAATTCCAGGTATGAAAGTTGGGGCGAATTGGAAAACTGGGCAAGAATGGTTTTTAACATCTTGGAAGTCACAAGATGACCCTGGAACTGGGGACTATACCTATAGGCTAAGTTCAGATCATAATGCATCGCCCCAATTTTTTTTGTATAAAGGTTTGAGTAAGTATTGGCGAAGTGATCCAGGGCCAGCGCCTACTTTGGTCGCTAATCAAGATGAAACTTATTATTTCATGATTGAAACCAATGCAATTACAAGAATAACAGTGACTGATTCTGCCTTAGAGCACCTTATATGGGATGGAGGTGGCTTTCAATGGAAGGAAGACTTCTCTGCACCGAAGTCCCGGTGTGACAGGTACGGACAGTGTGGTGCCAACAGTAGATGTAGCCCTGATAATGTTAATCTGTTTGAGTGTGACTGTTTGCCAGGGTATGTGCCTAATTCTGTAAGTGATTGGAATCAGAAAAATGGTTCAGGTGGATGTGTGAGTAATCGACTTGGTTTGTTGAAGTGTGGAGATGGCGACGGGTTTATAAAGGTGGCAAGAGTTAAATATCCAGACACATCGATAGCAGCATCGTTAAAATCAGGTATGAGTGACAAAGAGTGTGCACAGGAGTGCCTAAGAAATTGTTCTTGCACTGCATATTTGAGCACTGAAAATGAAGGGATTGTTGATTGCTTGACATGGTATGATGACTTGATGGACATTTTAGTGTACACAGAGCTTGGACGAGATCTCTATGTTCGTGTGAATGCAACTGTGTTAGCGGCAAATGCTGGAAGATCACAAGGTTTCTTGGAAAGGAGGGGTATGCTGGCTATTCCAATACTGTCTACTGCGCTAGCATTGGTACTAATCATTATGCTTGCATGGAAGTGGCGTAAGAAGAACAGGAACACAAGAGAGGAGCTTGAGGAAACTCAGAGACACCCCGAATTGCAATTTTTCGATCTTGACACAATAATATCAGCCACAGACCACTTCTCTCGTGTCAATGAACTTGGCCGTGGTGGCTTTGGCTCTGTTTATAAGGGTCAGCTATCAAATGAACAGAAAGTTGCTGTGAAAAGATTGTCCAAAACTTCAGGACAAGGGATTGAAGAATTTAAGAATGAAGTTGCACTTATAGCAAGACTTCAACACAGGAACCTTGTGAAACTTTTAGGCTGTTGTATAAAGGGAGAAGAAAGGATGTTAGTCCTAGAATACATGCCTAACAAAGGCTTGGACTCCTTTCTTTTTGATAAGACAAGACGGTCCTTCTTGGATTGGGAAAAGCGTTTTGAAATTATCAACGGGATTGCTCGTGGGATTCTGTATCTTCACCAAGACTCAAGATTGAGGATTATTCATAGAGATCTAAAAACTAGTAATGTTCTACTAGATGATGAGATGAACCCAAAAATTTCTGATTTTGGCATGGCAAGAATATTCCATGGAGACCAACTGCAAGATAAGACGAGCCGAATTGTTGGAACATATGGCTACATGTCACCAGAGTATGCAGTATTTGGGAGATTTTCCACAAAGTCTGATGTCTTTAGTTTTGGGATCATAATGTTGGAGATTGTAAGTGGCCAGAAAAACAATGGTTCTGATCTAGAGGATCCTTCCGTGAACTTAATAGGATGTGTATGGGAGCTCTGGAGAGAAGGCAGAGCCTTGGATATTGTGGATTCAACACTGAAGTCATATCATCCAAATGAAGCCATGAGATGCATACAAGTTGCGCTCTTGTGTGTACAAGAAGATCCGAATGACCGACCTGCCATGTCAGCCATTGTTTTCATGTTGAGTGATGAAGCATCTCCTCCATTGCCAAAGCAGCCGGCATTTGTTTACAAAAGAAATTTCGGCACTCATGTTGATCCATTACTTTCAAACAGATCTTCTTCTATAAATCACTTGACAGTAACTACAATGGAAGCTCGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

1477

Amino Acids

168.4

Weight (kDa)

6.29

Isoelectric Point (pI)

38.14

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 30 - 123 2.8e-21 D-mannose binding lectin
PAN_2 PF08276 212 - 274 6.6e-14 PAN-like domain
B_lectin PF01453 744 - 854 9.8e-35 D-mannose binding lectin
S_locus_glycop PF00954 901 - 979 8.4e-12 S-locus glycoprotein domain
PAN_2 PF08276 1003 - 1069 8.1e-17 PAN-like domain
Pkinase PF00069 1162 - 1427 3.3e-45 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 1164 - 1429 1.4e-51 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000112)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g03320 FvH4_3g03322 FvH4_3g03323 FvH4_3g03340 FvH4_3g03350 FvH4_3g03351 FvH4_3g03370 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g06140 FvH4_6g00257 FvH4_6g00257 FvH4_6g00270 FvH4_6g00300 FvH4_6g20800 FvH4_6g20800 FvH4_6g20800 FvH4_6g20800 FvH4_6g20800
malus_domestica MD05G1232700.v1.1 MD05G1327700.v1.1 MD05G1327800.v1.1 MD05G1327900.v1.1 MD05G1328000.v1.1 MD05G1328200.v1.1 MD05G1328300.v1.1 MD05G1328500.v1.1 MD05G1332000.v1.1 MD05G1332100.v1.1 MD10G1307600.v1.1 MD10G1307800.v1.1
prunus_persica Prupe.4G031900_v2.0.a1 Prupe.4G032000_v2.0.a1 Prupe.4G032000_v2.0.a1 Prupe.4G032100_v2.0.a1 Prupe.4G032200_v2.0.a1 Prupe.4G032200_v2.0.a1 Prupe.4G032200_v2.0.a1
pyrus_communis pycom05g30180 pycom05g30190 pycom05g30200 pycom05g30210 pycom10g25920 pycom10g25930
rosa_chinensis RchiOBHm_Chr2g0130831 RchiOBHm_Chr2g0132531 RchiOBHm_Chr2g0132541 RchiOBHm_Chr3g0455681 RchiOBHm_Chr3g0476681 RchiOBHm_Chr3g0476761 RchiOBHm_Chr3g0476771 RchiOBHm_Chr3g0476791 RchiOBHm_Chr3g0476801 RchiOBHm_Chr3g0476811 RchiOBHm_Chr4g0413551 RchiOBHm_Chr4g0413561 RchiOBHm_Chr5g0002911 RchiOBHm_Chr5g0005071 RchiOBHm_Chr5g0005101 RchiOBHm_Chr5g0005111 RchiOBHm_Chr5g0005121 RchiOBHm_Chr5g0005131 RchiOBHm_Chr5g0005141 RchiOBHm_Chr5g0005161 RchiOBHm_Chr5g0005171 RchiOBHm_Chr5g0006341 RchiOBHm_Chr5g0046161 RchiOBHm_Chr5g0046171 RchiOBHm_Chr5g0046181 RchiOBHm_Chr5g0046221 RchiOBHm_Chr5g0046231 RchiOBHm_Chr7g0224061 RchiOBHm_Chr7g0224081 RchiOBHm_Chr7g0224101 RchiOBHm_Chr7g0224111 RchiOBHm_Chr7g0224121
rosa_laevigata RLG00000010193 RLG00000019146 RLG00000019148 RLG00000019149 RLG00000019150 RLG00000023750 RLG00000023751 RLG00000023753 RLG00000029486 RLG00000031068 RLG00000031069 RLG00000031284 RLG00000031285 RLG00000031286 RLG00000031289 RLG00000031290 RLG00000031291 RLG00000031292 RLG00000031293 RLG00000031294 RLG00000031295 RLG00000031296 RLG00000031297 RLG00000031363 RLG00000032618 RLG00000032619
rosa_multiflora Rmu_co8147584.1_g000001 Rmu_co8205828.1_g000001 Rmu_co8373645.1_g000001 Rmu_co8407679.1_g000001 Rmu_co8452561.1_g000001 Rmu_sc0001035.1_g000076 Rmu_sc0001884.1_g000026 Rmu_sc0001884.1_g000027 Rmu_sc0001884.1_g000035 Rmu_sc0002157.1_g000026 Rmu_sc0002399.1_g000006 Rmu_sc0002399.1_g000007 Rmu_sc0002883.1_g000010 Rmu_sc0003629.1_g000014 Rmu_sc0003884.1_g000004 Rmu_sc0007865.1_g000005 Rmu_sc0008085.1_g000013 Rmu_sc0008085.1_g000014 Rmu_sc0008085.1_g000016 Rmu_sc0008085.1_g000018 Rmu_sc0008432.1_g000004 Rmu_sc0008714.1_g000002 Rmu_sc0009296.1_g000008 Rmu_sc0009296.1_g000009 Rmu_sc0009296.1_g000011 Rmu_sc0010281.1_g000001 Rmu_sc0010281.1_g000002 Rmu_sc0010714.1_g000011 Rmu_sc0010714.1_g000016 Rmu_sc0011169.1_g000001 Rmu_sc0011169.1_g000007 Rmu_sc0013603.1_g000006 Rmu_sc0020478.1_g000003 Rmu_sc0020478.1_g000007 Rmu_sc0025106.1_g000012 Rmu_sc0032709.1_g000001 Rmu_sc0033028.1_g000001
rosa_roxburghii Rroxscaffold_1G00069570 Rroxscaffold_1G00069610 Rroxscaffold_1G00069620 Rroxscaffold_1G00070480 Rroxscaffold_1G00070490 Rroxscaffold_1G00070500 Rroxscaffold_1G00070510 Rroxscaffold_1G00070520 Rroxscaffold_1G00070530 Rroxscaffold_1G00070540 Rroxscaffold_1G00070550 Rroxscaffold_1G00070590 Rroxscaffold_1G00072950 Rroxscaffold_1G00073080 Rroxscaffold_2G00111810 Rroxscaffold_2G00111820 Rroxscaffold_2G00113530 Rroxscaffold_2G00113870 Rroxscaffold_6G00405010 Rroxscaffold_6G00405020 Rroxscaffold_6G00423590 Rroxscaffold_6G00424100
rosa_rugosa Rorug02G0293200 Rorug02G0293300 Rorug02G0293400 Rorug02G0305900 Rorug02G0305900 Rorug03G0009100 Rorug03G0157000 Rorug03G0157000 Rorug03G0304900 Rorug04G0400500 Rorug04G0415200 Rorug04G0415300 Rorug04G0415400 Rorug04G0415500 Rorug04G0421100 Rorug05G0068000 Rorug05G0068100 Rorug05G0068200 Rorug05G0068500 Rorug05G0224600 Rorug05G0224700
rosa_samantha Rh2CG331700 Rh2CG341600 Rh2CG341700 Rh2DG381200 Rh3DG071200 Rh3DG233400 Rh3DG233500 Rh3DG233600 Rh5AG043100 Rh5CG026000 Rh5CG047700 Rh5CG047800 Rh5CG047900 Rh5CG048000 Rh5CG048100 Rh5CG048300 Rh5CG056500 Rh5CG340500 Rh5CG340700 Rh5CG340800 Rh7AG365000
rosa_wichuraiana Rw0G002360 Rw0G002370 Rw0G012520 Rw0G018230 Rw0G019190 Rw2G027480 Rw2G029150 Rw3G005520 Rw3G005880 Rw3G005890 Rw3G018840 Rw3G018850 Rw3G018870 Rw3G018880 Rw3G020740 Rw5G002190 Rw5G004180 Rw5G004190 Rw5G004890 Rw5G013960 Rw5G014000 Rw5G028610 Rw7G030910 Rw7G030920

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 3029, 3528
AasI GACNNNNNNGTC 1 cut(s) 3754
Acc36I ACCTGC 2 cut(s) 141, 4273
AccB1I GGYRCC 1 cut(s) 2864
AccB7I CCANNNNNTGG 1 cut(s) 1333
AccI GTMKAC 2 cut(s) 2351, 3332
AccII CGCG 2 cut(s) 1721, 2365
AciI CCGC 4 cut(s) 1563, 1713, 2365, 3266
AclWI GGATC 9 cut(s) 1532, 1584, 1778, 2666, 4058, 4100, 4113, 4244, 4361
AcoI YGGCCR 2 cut(s) 3502, 4075
AcuI CTGAAG 7 cut(s) 411, 602, 1013, 1498, 2146, 3567, 4205
AfaI GTAC 9 cut(s) 162, 206, 463, 518, 966, 2852, 3215, 3351, 4242
AfiI CCNNNNNNNGG 7 cut(s) 49, 395, 1333, 2085, 2582, 2788, 3719
AflII CTTAAG 2 cut(s) 733, 979
AflIII ACRYGT 3 cut(s) 1719, 2358, 3987
AgeI ACCGGT 1 cut(s) 2184
AhlI ACTAGT 3 cut(s) 163, 2308, 3866
AleI CACNNNNGTG 3 cut(s) 212, 836, 3112
AloI GAACNNNNNNTCC 4 cut(s) 150, 182, 1408, 1440
Alw21I GWGCWC 6 cut(s) 831, 2286, 2781, 3109, 3152, 4143
Alw26I GTCTC 4 cut(s) 1066, 1728, 3418, 3933
Alw44I GTGCAC 1 cut(s) 3105
AlwI GGATC 9 cut(s) 1532, 1584, 1778, 2666, 4058, 4100, 4113, 4244, 4361
AlwNI CAGNNNCTG 2 cut(s) 341, 2762
AoxI GGCC 4 cut(s) 1047, 2678, 3502, 4075
ApaLI GTGCAC 1 cut(s) 3105
ApeKI GCWGC 4 cut(s) 683, 724, 3068, 4324
AseI ATTAAT 1 cut(s) 498
AsiGI ACCGGT 1 cut(s) 2184
Asp700I GAANNNNTTC 2 cut(s) 742, 3127
AspLEI GCGC 3 cut(s) 2686, 3340, 4231
AspS9I GGNCC 4 cut(s) 29, 226, 2678, 3756
AsuC2I CCSGG 4 cut(s) 397, 493, 2169, 2839
AsuHPI GGTGA 7 cut(s) 818, 934, 1727, 1939, 2129, 3815, 3984
AsuNHI GCTAGC 1 cut(s) 3340
AvaII GGWCC 3 cut(s) 29, 226, 3756
BaeGI GKGCMC 2 cut(s) 536, 3109
BaeI ACNNNNGTAYC 2 cut(s) 2202, 2235
BalI TGGCCA 1 cut(s) 4077
BamHI GGATCC 1 cut(s) 4105
BanI GGYRCC 1 cut(s) 2864
BanII GRGCYC 1 cut(s) 4143
BauI CACGAG 2 cut(s) 3486, 3804
BbsI GAAGAC 6 cut(s) 1346, 1504, 1559, 1614, 1747, 2823
Bbv12I GWGCWC 6 cut(s) 831, 2286, 2781, 3109, 3152, 4143
BbvI GCAGC 4 cut(s) 670, 736, 3080, 4336
BccI CCATC 8 cut(s) 125, 614, 643, 1738, 2108, 2786, 3008, 3193
BceAI ACGGC 1 cut(s) 3489
BclI TGATCA 1 cut(s) 2476
BcnI CCSGG 4 cut(s) 397, 493, 2169, 2839
BcoDI GTCTC 4 cut(s) 1066, 1728, 3418, 3933
BcuI ACTAGT 3 cut(s) 163, 2308, 3866
BfmI CTRYAG 4 cut(s) 834, 1996, 2484, 2596
BfoI RGCGCY 1 cut(s) 2687
BfrI CTTAAG 2 cut(s) 733, 979
BfuAI ACCTGC 2 cut(s) 141, 4273
BglI GCCNNNNNGGC 1 cut(s) 3510
BglII AGATCT 5 cut(s) 847, 1240, 3232, 3856, 4385
BisI GCNGC 5 cut(s) 684, 725, 3069, 3267, 4325
BlsI GCNGC 5 cut(s) 685, 726, 3070, 3268, 4326
BmcAI AGTACT 1 cut(s) 162
Bme18I GGWCC 3 cut(s) 29, 226, 3756
BmgT120I GGNCC 4 cut(s) 29, 226, 2678, 3756
BmiI GGNNCC 4 cut(s) 666, 2866, 3647, 4107
BmrI ACTGGG 2 cut(s) 2541, 2592
BmsI GCATC 9 cut(s) 915, 1105, 1258, 1768, 1968, 2630, 3080, 4205, 4313
BmtI GCTAGC 1 cut(s) 3344
BmuI ACTGGG 2 cut(s) 2541, 2592
BpiI GAAGAC 6 cut(s) 1346, 1504, 1559, 1614, 1747, 2823
BpmI CTGGAG 3 cut(s) 1119, 1355, 4165
BpuEI CTTGAG 5 cut(s) 220, 1079, 1939, 3431, 3817
BpuMI CCSGG 4 cut(s) 397, 493, 2169, 2839
Bsa29I ATCGAT 1 cut(s) 3062
BsaBI GATNNNNATC 4 cut(s) 600, 1175, 1782, 2952
BsaI GGTCTC 1 cut(s) 3933
BsaWI WCCGGW 1 cut(s) 2184
BsaXI ACNNNNNCTCC 6 cut(s) 150, 180, 1408, 1438, 2295, 2325
Bsc4I CCNNNNNNNGG 7 cut(s) 49, 395, 1333, 2085, 2582, 2788, 3719
Bse118I RCCGGY 3 cut(s) 468, 2184, 4327
Bse1I ACTGG 5 cut(s) 514, 972, 1229, 2536, 2587
Bse3DI GCAATG 2 cut(s) 1261, 4313
Bse8I GATNNNNATC 4 cut(s) 600, 1175, 1782, 2952
BseCI ATCGAT 1 cut(s) 3062
BseJI GATNNNNATC 4 cut(s) 600, 1175, 1782, 2952
BseLI CCNNNNNNNGG 7 cut(s) 49, 395, 1333, 2085, 2582, 2788, 3719
BseMI GCAATG 2 cut(s) 1261, 4313
BseMII CTCAG 6 cut(s) 873, 920, 1171, 1873, 2222, 3434
BseNI ACTGG 5 cut(s) 514, 972, 1229, 2536, 2587
BseRI GAGGAG 5 cut(s) 1084, 1725, 2039, 3419, 4299
BseSI GKGCMC 2 cut(s) 536, 3109
BseXI GCAGC 4 cut(s) 670, 736, 3080, 4336
BsgI GTGCAG 3 cut(s) 234, 665, 2811
Bsh1236I CGCG 2 cut(s) 1721, 2365
Bsh1285I CGRYCG 1 cut(s) 2369
BshFI GGCC 4 cut(s) 1049, 2680, 3504, 4077
BshNI GGYRCC 1 cut(s) 2864
BshTI ACCGGT 1 cut(s) 2184
BshVI ATCGAT 1 cut(s) 3062
BsiEI CGRYCG 1 cut(s) 2369
BsiHKAI GWGCWC 6 cut(s) 831, 2286, 2781, 3109, 3152, 4143
BsiSI CCGG 7 cut(s) 396, 469, 492, 2169, 2185, 2839, 4328
BslFI GGGAC 5 cut(s) 413, 855, 2087, 2600, 2821
BslI CCNNNNNNNGG 7 cut(s) 49, 395, 1333, 2085, 2582, 2788, 3719
BsmAI GTCTC 4 cut(s) 1066, 1728, 3418, 3933
BsmBI CGTCTC 1 cut(s) 1728
BsmFI GGGAC 5 cut(s) 413, 855, 2087, 2600, 2821
BsmI GAATGC 3 cut(s) 892, 1748, 3256
BsnI GGCC 4 cut(s) 1049, 2680, 3504, 4077
Bso31I GGTCTC 1 cut(s) 3933
Bsp1286I GDGCHC 7 cut(s) 536, 831, 2286, 2781, 3109, 3152, 4143
Bsp1407I TGTACA 2 cut(s) 3213, 4240
Bsp19I CCATGG 2 cut(s) 1318, 3934
BspACI CCGC 4 cut(s) 1563, 1713, 2365, 3266
BspANI GGCC 4 cut(s) 1049, 2680, 3504, 4077
BspCNI CTCAG 6 cut(s) 874, 921, 1170, 1872, 2221, 3433
BspDI ATCGAT 1 cut(s) 3062
BspFNI CGCG 2 cut(s) 1721, 2365
BspHI TCATGA 1 cut(s) 2724
BspLI GGNNCC 4 cut(s) 666, 2866, 3647, 4107
BspMAI CTGCAG 1 cut(s) 838
BspMI ACCTGC 2 cut(s) 141, 4273
BspOI GCTAGC 1 cut(s) 3344
BspPI GGATC 9 cut(s) 1532, 1584, 1778, 2666, 4058, 4100, 4113, 4244, 4361
BspT107I GGYRCC 1 cut(s) 2864
BspTI CTTAAG 2 cut(s) 733, 979
BspTNI GGTCTC 1 cut(s) 3933
BsrDI GCAATG 2 cut(s) 1261, 4313
BsrFI RCCGGY 3 cut(s) 468, 2184, 4327
BsrGI TGTACA 2 cut(s) 3213, 4240
BsrI ACTGG 5 cut(s) 514, 972, 1229, 2536, 2587
BssAI RCCGGY 3 cut(s) 468, 2184, 4327
BssSI CACGAG 2 cut(s) 3486, 3804
BssT1I CCWWGG 3 cut(s) 1318, 3934, 4161
Bst2BI CACGAG 2 cut(s) 3486, 3804
Bst6I CTCTTC 1 cut(s) 2048
BstAFI CTTAAG 2 cut(s) 733, 979
BstAPI GCANNNNNTGC 1 cut(s) 789
BstAUI TGTACA 2 cut(s) 3213, 4240
BstC8I GCNNGC 6 cut(s) 722, 2682, 3315, 3342, 3366, 4329
BstDSI CCRYGG 4 cut(s) 1119, 1318, 3505, 3934
BstENI CCTNNNNNAGG 1 cut(s) 3717
BstFNI CGCG 2 cut(s) 1721, 2365
BstH2I RGCGCY 1 cut(s) 2687
BstHHI GCGC 3 cut(s) 2686, 3340, 4231
BstMAI GTCTC 4 cut(s) 1066, 1728, 3418, 3933
BstMCI CGRYCG 1 cut(s) 2369
BstMWI GCNNNNNNNGC 7 cut(s) 789, 887, 3272, 3510, 3626, 4274, 4324
BstNSI RCATGY 3 cut(s) 468, 3712, 3991
BstSFI CTRYAG 4 cut(s) 834, 1996, 2484, 2596
BstSLI GKGCMC 2 cut(s) 536, 3109
BstUI CGCG 2 cut(s) 1721, 2365
BstV1I GCAGC 4 cut(s) 670, 736, 3080, 4336
BstV2I GAAGAC 6 cut(s) 1346, 1504, 1559, 1614, 1747, 2823
BstX2I RGATCY 7 cut(s) 847, 1240, 3232, 3856, 4105, 4249, 4385
BstYI RGATCY 7 cut(s) 847, 1240, 3232, 3856, 4105, 4249, 4385
Bsu15I ATCGAT 1 cut(s) 3062
BsuRI GGCC 4 cut(s) 1049, 2680, 3504, 4077
BsuTUI ATCGAT 1 cut(s) 3062
BtgI CCRYGG 4 cut(s) 1119, 1318, 3505, 3934
BtgZI GCGATG 1 cut(s) 2607
BtsI GCAGTG 4 cut(s) 734, 831, 843, 3135
BveI ACCTGC 2 cut(s) 141, 4273
Cac8I GCNNGC 6 cut(s) 722, 2682, 3315, 3342, 3366, 4329
CaiI CAGNNNCTG 2 cut(s) 341, 2762
CciI TCATGA 1 cut(s) 2724
CfoI GCGC 3 cut(s) 2686, 3340, 4231
Cfr10I RCCGGY 3 cut(s) 468, 2184, 4327
Cfr13I GGNCC 4 cut(s) 29, 226, 2678, 3756
ClaI ATCGAT 1 cut(s) 3062
CseI GACGC 2 cut(s) 1710, 1727
CsiI ACCWGGT 1 cut(s) 84
Csp6I GTAC 9 cut(s) 161, 205, 462, 517, 965, 2851, 3214, 3350, 4241
CspAI ACCGGT 1 cut(s) 2184
CviQI GTAC 9 cut(s) 161, 205, 462, 517, 965, 2851, 3214, 3350, 4241
DraI TTTAAA 1 cut(s) 591
DrdI GACNNNNNNGTC 1 cut(s) 3754
DseDI GACNNNNNNGTC 1 cut(s) 3754
EaeI YGGCCR 2 cut(s) 3502, 4075
Eam1104I CTCTTC 1 cut(s) 2048
EarI CTCTTC 1 cut(s) 2048
Ecl136II GAGCTC 1 cut(s) 4141
Eco130I CCWWGG 3 cut(s) 1318, 3934, 4161
Eco24I GRGCYC 1 cut(s) 4143
Eco31I GGTCTC 1 cut(s) 3933
Eco47I GGWCC 3 cut(s) 29, 226, 3756
Eco53kI GAGCTC 1 cut(s) 4141
Eco57I CTGAAG 7 cut(s) 411, 602, 1013, 1498, 2146, 3567, 4205
EcoICRI GAGCTC 1 cut(s) 4141
EcoNI CCTNNNNNAGG 1 cut(s) 3717
EcoT14I CCWWGG 3 cut(s) 1318, 3934, 4161
EcoT22I ATGCAT 2 cut(s) 2623, 4220
EcoT38I GRGCYC 1 cut(s) 4143
ErhI CCWWGG 3 cut(s) 1318, 3934, 4161
Esp3I CGTCTC 1 cut(s) 1728
FalI AAGNNNNNCTT 4 cut(s) 2804, 2836, 3606, 3638
FaqI GGGAC 5 cut(s) 413, 855, 2087, 2600, 2821
FauNDI CATATG 2 cut(s) 870, 3979
FbaI TGATCA 1 cut(s) 2476
FblI GTMKAC 2 cut(s) 2351, 3332
Fnu4HI GCNGC 5 cut(s) 684, 725, 3069, 3267, 4325
FriOI GRGCYC 1 cut(s) 4143
Fsp4HI GCNGC 5 cut(s) 684, 725, 3069, 3267, 4325
GlaI GCGC 3 cut(s) 2685, 3339, 4230
GluI GCNGC 5 cut(s) 684, 725, 3069, 3267, 4325
GsuI CTGGAG 3 cut(s) 1119, 1355, 4165
HaeII RGCGCY 1 cut(s) 2687
HaeIII GGCC 4 cut(s) 1049, 2680, 3504, 4077
HapII CCGG 7 cut(s) 396, 469, 492, 2169, 2185, 2839, 4328
HgaI GACGC 2 cut(s) 1710, 1727
HhaI GCGC 3 cut(s) 2686, 3340, 4231
Hin6I GCGC 3 cut(s) 2684, 3338, 4229
HinP1I GCGC 3 cut(s) 2684, 3338, 4229
HincII GTYRAC 2 cut(s) 40, 2383
HindII GTYRAC 2 cut(s) 40, 2383
HpaI GTTAAC 2 cut(s) 40, 2383
HpaII CCGG 7 cut(s) 396, 469, 492, 2169, 2185, 2839, 4328
HphI GGTGA 7 cut(s) 818, 934, 1727, 1939, 2129, 3815, 3984
Hpy99I CGWCG 1 cut(s) 3023
HpyCH4IV ACGT 1 cut(s) 2358
HpyF10VI GCNNNNNNNGC 7 cut(s) 789, 887, 3272, 3510, 3626, 4274, 4324
HpySE526I ACGT 1 cut(s) 2358
HspAI GCGC 3 cut(s) 2684, 3338, 4229
KroI GCCGGC 1 cut(s) 4327
KroNI GCCGGC 1 cut(s) 4329
Ksp22I TGATCA 1 cut(s) 2476
KspAI GTTAAC 2 cut(s) 40, 2383
LmnI GCTCC 5 cut(s) 63, 664, 780, 3406, 4138
Lsp1109I GCAGC 4 cut(s) 670, 736, 3080, 4336
LweI GCATC 9 cut(s) 915, 1105, 1258, 1768, 1968, 2630, 3080, 4205, 4313
MabI ACCWGGT 1 cut(s) 84
MaeII ACGT 1 cut(s) 2358
MfeI CAATTG 2 cut(s) 1532, 2099
MflI RGATCY 7 cut(s) 847, 1240, 3232, 3856, 4105, 4249, 4385
MhlI GDGCHC 7 cut(s) 536, 831, 2286, 2781, 3109, 3152, 4143
MlsI TGGCCA 1 cut(s) 4077
MluI ACGCGT 1 cut(s) 1719
MluNI TGGCCA 1 cut(s) 4077
MlyI GAGTC 7 cut(s) 884, 1202, 1625, 1652, 2205, 3722, 3824
MmeI TCCRAC 6 cut(s) 597, 672, 1608, 2173, 3952, 4041
Mox20I TGGCCA 1 cut(s) 4077
Mph1103I ATGCAT 2 cut(s) 2623, 4220
MroNI GCCGGC 1 cut(s) 4327
MroXI GAANNNNTTC 2 cut(s) 742, 3127
MscI TGGCCA 1 cut(s) 4077
MslI CAYNNNNRTG 6 cut(s) 212, 836, 3112, 3209, 3373, 4200
Msp20I TGGCCA 1 cut(s) 4077
MspCI CTTAAG 2 cut(s) 733, 979
MspI CCGG 7 cut(s) 396, 469, 492, 2169, 2185, 2839, 4328
MunI CAATTG 2 cut(s) 1532, 2099
Mva1269I GAATGC 3 cut(s) 892, 1748, 3256
MvnI CGCG 2 cut(s) 1721, 2365
MwoI GCNNNNNNNGC 7 cut(s) 789, 887, 3272, 3510, 3626, 4274, 4324
NaeI GCCGGC 1 cut(s) 4329
NciI CCSGG 4 cut(s) 397, 493, 2169, 2839
NcoI CCATGG 2 cut(s) 1318, 3934
NdeI CATATG 2 cut(s) 870, 3979
NgoMIV GCCGGC 1 cut(s) 4327
NheI GCTAGC 1 cut(s) 3340
NlaIV GGNNCC 4 cut(s) 666, 2866, 3647, 4107
NmeAIII GCCGAG 1 cut(s) 2038
NsiI ATGCAT 2 cut(s) 2623, 4220
NspI RCATGY 3 cut(s) 468, 3712, 3991
OliI CACNNNNGTG 3 cut(s) 212, 836, 3112
PagI TCATGA 1 cut(s) 2724
PciI ACATGT 1 cut(s) 3987
PctI GAATGC 3 cut(s) 892, 1748, 3256
PdiI GCCGGC 1 cut(s) 4329
PdmI GAANNNNTTC 2 cut(s) 742, 3127
PfeI GAWTC 8 cut(s) 601, 1540, 1792, 2038, 2765, 2953, 3811, 4175
PflMI CCANNNNNTGG 1 cut(s) 1333
PfoI TCCNGGA 5 cut(s) 285, 491, 1179, 1332, 2436
PinAI ACCGGT 1 cut(s) 2184
PkrI GCNGC 5 cut(s) 685, 726, 3070, 3268, 4326
PleI GAGTC 7 cut(s) 883, 1202, 1625, 1651, 2204, 3722, 3824
PpsI GAGTC 7 cut(s) 883, 1202, 1625, 1651, 2204, 3722, 3824
PscI ACATGT 1 cut(s) 3987
PshBI ATTAAT 1 cut(s) 498
PsiI TTATAA 2 cut(s) 3029, 3528
Psp124BI GAGCTC 1 cut(s) 4143
PspN4I GGNNCC 4 cut(s) 666, 2866, 3647, 4107
PspPI GGNCC 4 cut(s) 29, 226, 2678, 3756
PstI CTGCAG 1 cut(s) 838
PstNI CAGNNNCTG 2 cut(s) 341, 2762
PsuI RGATCY 7 cut(s) 847, 1240, 3232, 3856, 4105, 4249, 4385
RsaI GTAC 9 cut(s) 162, 206, 463, 518, 966, 2852, 3215, 3351, 4242
RsaNI GTAC 9 cut(s) 161, 205, 462, 517, 965, 2851, 3214, 3350, 4241
RseI CAYNNNNRTG 6 cut(s) 212, 836, 3112, 3209, 3373, 4200
SacI GAGCTC 1 cut(s) 4143
SatI GCNGC 5 cut(s) 684, 725, 3069, 3267, 4325
Sau96I GGNCC 4 cut(s) 29, 226, 2678, 3756
ScaI AGTACT 1 cut(s) 162
SchI GAGTC 7 cut(s) 884, 1202, 1625, 1652, 2205, 3722, 3824
SduI GDGCHC 7 cut(s) 536, 831, 2286, 2781, 3109, 3152, 4143
SexAI ACCWGGT 1 cut(s) 84
SfaNI GCATC 9 cut(s) 915, 1105, 1258, 1768, 1968, 2630, 3080, 4205, 4313
SfcI CTRYAG 4 cut(s) 834, 1996, 2484, 2596
SinI GGWCC 3 cut(s) 29, 226, 3756
SmiMI CAYNNNNRTG 6 cut(s) 212, 836, 3112, 3209, 3373, 4200
SmlI CTYRAG 7 cut(s) 235, 733, 979, 1058, 1954, 3410, 3832
SmoI CTYRAG 7 cut(s) 235, 733, 979, 1058, 1954, 3410, 3832
SpeI ACTAGT 3 cut(s) 163, 2308, 3866
SsiI CCGC 4 cut(s) 1563, 1713, 2365, 3266
SspI AATATT 3 cut(s) 942, 1314, 3930
SstI GAGCTC 1 cut(s) 4143
StyI CCWWGG 3 cut(s) 1318, 3934, 4161
TaiI ACGT 1 cut(s) 2361
TaqI TCGA 5 cut(s) 1506, 2989, 3062, 3447, 4429
TaqII GACCGA 1 cut(s) 4275
TatI WGTACW 4 cut(s) 160, 516, 3213, 4240
TauI GCSGC 1 cut(s) 3269
TfiI GAWTC 8 cut(s) 601, 1540, 1792, 2038, 2765, 2953, 3811, 4175
TseI GCWGC 4 cut(s) 683, 724, 3068, 4324
TspGWI ACGGA 4 cut(s) 1136, 1383, 2868, 4102
Van91I CCANNNNNTGG 1 cut(s) 1333
Vha464I CTTAAG 2 cut(s) 733, 979
VneI GTGCAC 1 cut(s) 3105
VpaK11BI GGWCC 3 cut(s) 29, 226, 3756
VspI ATTAAT 1 cut(s) 498
XagI CCTNNNNNAGG 1 cut(s) 3717
XbaI TCTAGA 3 cut(s) 1264, 1412, 4099
XceI RCATGY 3 cut(s) 468, 3712, 3991
XcmI CCANNNNNNNNNTGG 1 cut(s) 4085
XmiI GTMKAC 2 cut(s) 2351, 3332
XmnI GAANNNNTTC 2 cut(s) 742, 3127
ZrmI AGTACT 1 cut(s) 162
Zsp2I ATGCAT 2 cut(s) 2623, 4220
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.