Rh5CG026000

serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5C
OG0000112
Physical Location & Seq
Forward (+)
1618479 .. 1621504
3026 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5CG026000.1

Sequence Viewer

Length: 1497 bp
ATGCCACTGTTTGCTACCTACAAAGTTGCTAACGCCCAGAAAATGTTGGTCAACGCTCTGCTTCTCTTCCTCCTCTTCCGATTTTGCGATTCCAGGGACACCTTAACATGGAACCAAGAACAACTGAAGGATGATGGTGGAGTTTTAGTGTCCAAACAGAGCAAGTTCGAGTTGGGTTTCTTCAGCCCCGGAAATTCTAGCTACCGGTATATTGGAATTTGGTATTCTCAGACTAAAGTATCTGAGAAAACAGTGGTGTGGGTTGCAAACAGGAACAATCCCATCAATGATACCTCTGGTGTGCTCAAAATAAACAGGTATGGAGAGCTGGCCCTTTATGCTTATAACATGAACAGCACTCCTGTTTGGTCCACCAATGTGTCACGGCCGGTCCAAAATAATAACGCAAGCACTTTTTCTGCACAGCTTTTAGATGCAGGAAATTTAGTTGTGTTCCAGGATGATAATAATGAAATCTATGTATGGCAAAGTTTTGATTATCCTACAGATACTCAAATTCCAGGTATGAAAGTCGGGGTGAATTGGAAAACTGGGCTAGAATGGGCTTTCACATCTTGGAAGTCACGGGATGACCCTGGACTTGGGGACTATACCTTTAGGCTTTATCCAGATCAGACTGCCGCCCCCCAATATTTTGTGTATAAAGGTTTGAGCAAGTATTGGCGAAGTGAGTCAGGGCCAGCGCCTCCTTTTGTCACTAATCAAGAGGAAACTTATTATTTCTTCAATTACACCAATGCAATTACAAGAACGACGTTGACCGATTCTGGTAGGTTAAATCGCCTTACATGGGATAATGGTGGCCTTCAATGGAAGGAAGTCTATTCGGCACCGAAGTCCCGGTGTGACTGGTATGGACAGTGTGGTGCCAACAGCAAATGTAAGCCTGACAATATTAATGAGTTTGAGTGTGAATGTTTACCAGGGTATGAGCCTAGTTCTATAAATGATTGGAATCAGAAAAATGGGTCGGGTGGATGTGTGAGTAAGCGAGTTGGTGTATCAAAGTGCGGGAATGGAGATGGGTTTGTGAATGTGGCAAGAGTTAAATTTCCAGACACATCAATAGCATCACGGTTGAGAACAGGTATGAGTGCCAAAGAGTGTGAGCAGGACTGCTTAAGAAATTGTTCTTGCACCGCATATTTGAGCATCGAATATGAAGGGCTTGTGGAGTGCTTGACATGGTATGATGACTTGATGGATATTTTAGTGTACACAGAGCGTGGACGAGATTTATACGTACGTGTAAATAAAACAGAGTTAGCTGCATATGCAGGAAGATCACAAGTTTTCTTGGAAAGGAGGGGTATGCTCGCTATTCCAATATTGTCTGCTCTACTGGCATTGGTCCTAATCATTATGCTTGCTTGTTGGTGGAGTAAGAAGAACAGGAGCACAGAAGGTTTGGGAGCTCTGGGAAGAAGGCATAGCCTTAGATATTTTGGATTCGACACTGAAGTCATATCAGCCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
B_lectin DUF3403 PAN_2 Pkinase Pkinase_Tyr S_locus_glycop

Protein Analysis

498

Amino Acids

56.46

Weight (kDa)

7.8

Isoelectric Point (pI)

41.44

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 84 - 194 4.2e-35 D-mannose binding lectin
S_locus_glycop PF00954 237 - 320 5.8e-17 S-locus glycoprotein domain
PAN_2 PF08276 344 - 410 5.3e-18 PAN-like domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000112)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g03320 FvH4_3g03322 FvH4_3g03323 FvH4_3g03340 FvH4_3g03350 FvH4_3g03351 FvH4_3g03370 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g06140 FvH4_6g00257 FvH4_6g00257 FvH4_6g00270 FvH4_6g00300 FvH4_6g20800 FvH4_6g20800 FvH4_6g20800 FvH4_6g20800 FvH4_6g20800
malus_domestica MD05G1232700.v1.1 MD05G1327700.v1.1 MD05G1327800.v1.1 MD05G1327900.v1.1 MD05G1328000.v1.1 MD05G1328200.v1.1 MD05G1328300.v1.1 MD05G1328500.v1.1 MD05G1332000.v1.1 MD05G1332100.v1.1 MD10G1307600.v1.1 MD10G1307800.v1.1
prunus_persica Prupe.4G031900_v2.0.a1 Prupe.4G032000_v2.0.a1 Prupe.4G032000_v2.0.a1 Prupe.4G032100_v2.0.a1 Prupe.4G032200_v2.0.a1 Prupe.4G032200_v2.0.a1 Prupe.4G032200_v2.0.a1
pyrus_communis pycom05g30180 pycom05g30190 pycom05g30200 pycom05g30210 pycom10g25920 pycom10g25930
rosa_chinensis RchiOBHm_Chr2g0130831 RchiOBHm_Chr2g0132531 RchiOBHm_Chr2g0132541 RchiOBHm_Chr3g0455681 RchiOBHm_Chr3g0476681 RchiOBHm_Chr3g0476761 RchiOBHm_Chr3g0476771 RchiOBHm_Chr3g0476791 RchiOBHm_Chr3g0476801 RchiOBHm_Chr3g0476811 RchiOBHm_Chr4g0413551 RchiOBHm_Chr4g0413561 RchiOBHm_Chr5g0002911 RchiOBHm_Chr5g0005071 RchiOBHm_Chr5g0005101 RchiOBHm_Chr5g0005111 RchiOBHm_Chr5g0005121 RchiOBHm_Chr5g0005131 RchiOBHm_Chr5g0005141 RchiOBHm_Chr5g0005161 RchiOBHm_Chr5g0005171 RchiOBHm_Chr5g0006341 RchiOBHm_Chr5g0046161 RchiOBHm_Chr5g0046171 RchiOBHm_Chr5g0046181 RchiOBHm_Chr5g0046221 RchiOBHm_Chr5g0046231 RchiOBHm_Chr7g0224061 RchiOBHm_Chr7g0224081 RchiOBHm_Chr7g0224101 RchiOBHm_Chr7g0224111 RchiOBHm_Chr7g0224121
rosa_laevigata RLG00000010193 RLG00000019146 RLG00000019148 RLG00000019149 RLG00000019150 RLG00000023750 RLG00000023751 RLG00000023753 RLG00000029486 RLG00000031068 RLG00000031069 RLG00000031284 RLG00000031285 RLG00000031286 RLG00000031289 RLG00000031290 RLG00000031291 RLG00000031292 RLG00000031293 RLG00000031294 RLG00000031295 RLG00000031296 RLG00000031297 RLG00000031363 RLG00000032618 RLG00000032619
rosa_multiflora Rmu_co8147584.1_g000001 Rmu_co8205828.1_g000001 Rmu_co8373645.1_g000001 Rmu_co8407679.1_g000001 Rmu_co8452561.1_g000001 Rmu_sc0001035.1_g000076 Rmu_sc0001884.1_g000026 Rmu_sc0001884.1_g000027 Rmu_sc0001884.1_g000035 Rmu_sc0002157.1_g000026 Rmu_sc0002399.1_g000006 Rmu_sc0002399.1_g000007 Rmu_sc0002883.1_g000010 Rmu_sc0003629.1_g000014 Rmu_sc0003884.1_g000004 Rmu_sc0007865.1_g000005 Rmu_sc0008085.1_g000013 Rmu_sc0008085.1_g000014 Rmu_sc0008085.1_g000016 Rmu_sc0008085.1_g000018 Rmu_sc0008432.1_g000004 Rmu_sc0008714.1_g000002 Rmu_sc0009296.1_g000008 Rmu_sc0009296.1_g000009 Rmu_sc0009296.1_g000011 Rmu_sc0010281.1_g000001 Rmu_sc0010281.1_g000002 Rmu_sc0010714.1_g000011 Rmu_sc0010714.1_g000016 Rmu_sc0011169.1_g000001 Rmu_sc0011169.1_g000007 Rmu_sc0013603.1_g000006 Rmu_sc0020478.1_g000003 Rmu_sc0020478.1_g000007 Rmu_sc0025106.1_g000012 Rmu_sc0032709.1_g000001 Rmu_sc0033028.1_g000001
rosa_roxburghii Rroxscaffold_1G00069570 Rroxscaffold_1G00069610 Rroxscaffold_1G00069620 Rroxscaffold_1G00070480 Rroxscaffold_1G00070490 Rroxscaffold_1G00070500 Rroxscaffold_1G00070510 Rroxscaffold_1G00070520 Rroxscaffold_1G00070530 Rroxscaffold_1G00070540 Rroxscaffold_1G00070550 Rroxscaffold_1G00070590 Rroxscaffold_1G00072950 Rroxscaffold_1G00073080 Rroxscaffold_2G00111810 Rroxscaffold_2G00111820 Rroxscaffold_2G00113530 Rroxscaffold_2G00113870 Rroxscaffold_6G00405010 Rroxscaffold_6G00405020 Rroxscaffold_6G00423590 Rroxscaffold_6G00424100
rosa_rugosa Rorug02G0293200 Rorug02G0293300 Rorug02G0293400 Rorug02G0305900 Rorug02G0305900 Rorug03G0009100 Rorug03G0157000 Rorug03G0157000 Rorug03G0304900 Rorug04G0400500 Rorug04G0415200 Rorug04G0415300 Rorug04G0415400 Rorug04G0415500 Rorug04G0421100 Rorug05G0068000 Rorug05G0068100 Rorug05G0068200 Rorug05G0068500 Rorug05G0224600 Rorug05G0224700
rosa_samantha Rh2CG331700 Rh2CG341600 Rh2CG341700 Rh2DG381200 Rh3DG071200 Rh3DG233400 Rh3DG233500 Rh3DG233600 Rh5AG043100 Rh5CG026000 Rh5CG047700 Rh5CG047800 Rh5CG047900 Rh5CG048000 Rh5CG048100 Rh5CG048300 Rh5CG056500 Rh5CG340500 Rh5CG340700 Rh5CG340800 Rh7AG365000
rosa_wichuraiana Rw0G002360 Rw0G002370 Rw0G012520 Rw0G018230 Rw0G019190 Rw2G027480 Rw2G029150 Rw3G005520 Rw3G005880 Rw3G005890 Rw3G018840 Rw3G018850 Rw3G018870 Rw3G018880 Rw3G020740 Rw5G002190 Rw5G004180 Rw5G004190 Rw5G004890 Rw5G013960 Rw5G014000 Rw5G028610 Rw7G030910 Rw7G030920

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 345
AasI GACNNNNNNGTC 1 cut(s) 1481
AccB1I GGYRCC 2 cut(s) 850, 887
AciI CCGC 3 cut(s) 642, 1032, 1161
AcoI YGGCCR 1 cut(s) 386
AcsI RAATTY 5 cut(s) 193, 216, 442, 516, 1070
AcuI CTGAAG 2 cut(s) 146, 166
AfaI GTAC 2 cut(s) 1238, 1266
AfiI CCNNNNNNNGG 3 cut(s) 108, 602, 811
AflII CTTAAG 1 cut(s) 1141
AflIII ACRYGT 1 cut(s) 1267
AgeI ACCGGT 1 cut(s) 204
AgsI TTSAA 2 cut(s) 748, 830
AjnI CCWGG 5 cut(s) 92, 456, 520, 595, 943
AleI CACNNNNGTG 1 cut(s) 377
AluBI AGCT 5 cut(s) 201, 328, 427, 1289, 1436
AluI AGCT 5 cut(s) 201, 328, 427, 1289, 1436
Alw21I GWGCWC 3 cut(s) 306, 1421, 1438
AoxI GGCC 4 cut(s) 330, 386, 698, 823
ApeKI GCWGC 1 cut(s) 1289
ApoI RAATTY 5 cut(s) 193, 216, 442, 516, 1070
AseI ATTAAT 1 cut(s) 918
AsiGI ACCGGT 1 cut(s) 204
Asp700I GAANNNNTTC 1 cut(s) 1150
AspLEI GCGC 1 cut(s) 706
AspS9I GGNCC 5 cut(s) 331, 369, 391, 698, 1372
AsuC2I CCSGG 2 cut(s) 189, 862
AsuHPI GGTGA 1 cut(s) 550
AvaII GGWCC 3 cut(s) 369, 391, 1372
BaeI ACNNNNGTAYC 2 cut(s) 222, 255
BanI GGYRCC 2 cut(s) 850, 887
BanII GRGCYC 1 cut(s) 1438
Bbv12I GWGCWC 3 cut(s) 306, 1421, 1438
BbvI GCAGC 1 cut(s) 1276
BccI CCATC 4 cut(s) 128, 290, 1037, 1216
BceAI ACGGC 1 cut(s) 401
BciT130I CCWGG 5 cut(s) 94, 458, 522, 597, 945
BcnI CCSGG 2 cut(s) 189, 862
BfaI CTAG 3 cut(s) 198, 557, 957
BfmI CTRYAG 1 cut(s) 504
BfoI RGCGCY 1 cut(s) 707
BfrI CTTAAG 1 cut(s) 1141
BisI GCNGC 2 cut(s) 642, 1290
BlsI GCNGC 2 cut(s) 643, 1291
Bme1390I CCNGG 7 cut(s) 94, 189, 458, 522, 597, 862, 945
Bme18I GGWCC 3 cut(s) 369, 391, 1372
BmgT120I GGNCC 5 cut(s) 331, 369, 391, 698, 1372
BmiI GGNNCC 3 cut(s) 113, 852, 889
BmrFI CCNGG 7 cut(s) 94, 189, 458, 522, 597, 862, 945
BmrI ACTGGG 1 cut(s) 561
BmsI GCATC 3 cut(s) 424, 1100, 1182
BmuI ACTGGG 1 cut(s) 561
BpuMI CCSGG 2 cut(s) 189, 862
BsaAI YACGTR 2 cut(s) 1264, 1268
BsaBI GATNNNNATC 1 cut(s) 975
BsaJI CCNNGG 4 cut(s) 93, 187, 595, 944
BsaWI WCCGGW 1 cut(s) 204
BsaXI ACNNNNNCTCC 2 cut(s) 132, 162
Bsc4I CCNNNNNNNGG 3 cut(s) 108, 602, 811
Bse118I RCCGGY 2 cut(s) 204, 388
Bse1I ACTGG 3 cut(s) 556, 875, 1368
Bse8I GATNNNNATC 1 cut(s) 975
BseBI CCWGG 5 cut(s) 94, 458, 522, 597, 945
BseDI CCNNGG 4 cut(s) 93, 187, 595, 944
BseGI GGATG 4 cut(s) 136, 466, 595, 1004
BseJI GATNNNNATC 1 cut(s) 975
BseLI CCNNNNNNNGG 3 cut(s) 108, 602, 811
BseMII CTCAG 2 cut(s) 234, 242
BseNI ACTGG 3 cut(s) 556, 875, 1368
BseRI GAGGAG 1 cut(s) 62
BseX3I CGGCCG 1 cut(s) 386
BseXI GCAGC 1 cut(s) 1276
BsgI GTGCAG 1 cut(s) 405
Bsh1285I CGRYCG 1 cut(s) 389
BshFI GGCC 4 cut(s) 332, 388, 700, 825
BshNI GGYRCC 2 cut(s) 850, 887
BshTI ACCGGT 1 cut(s) 204
BsiEI CGRYCG 1 cut(s) 389
BsiHKAI GWGCWC 3 cut(s) 306, 1421, 1438
BsiSI CCGG 4 cut(s) 189, 205, 389, 862
BsiWI CGTACG 1 cut(s) 1264
BslFI GGGAC 3 cut(s) 110, 620, 844
BslI CCNNNNNNNGG 3 cut(s) 108, 602, 811
BsmFI GGGAC 3 cut(s) 110, 620, 844
BsnI GGCC 4 cut(s) 332, 388, 700, 825
Bsp1286I GDGCHC 3 cut(s) 306, 1421, 1438
Bsp1407I TGTACA 1 cut(s) 1236
Bsp143I GATC 2 cut(s) 631, 1304
BspACI CCGC 3 cut(s) 642, 1032, 1161
BspANI GGCC 4 cut(s) 332, 388, 700, 825
BspCNI CTCAG 2 cut(s) 235, 241
BspLI GGNNCC 3 cut(s) 113, 852, 889
BspT107I GGYRCC 2 cut(s) 850, 887
BspTI CTTAAG 1 cut(s) 1141
BsrFI RCCGGY 2 cut(s) 204, 388
BsrGI TGTACA 1 cut(s) 1236
BsrI ACTGG 3 cut(s) 556, 875, 1368
BssAI RCCGGY 2 cut(s) 204, 388
BssECI CCNNGG 4 cut(s) 93, 187, 595, 944
BssMI GATC 2 cut(s) 631, 1304
Bst2UI CCWGG 5 cut(s) 94, 458, 522, 597, 945
Bst4CI ACNGT 4 cut(s) 9, 253, 882, 1098
Bst6I CTCTTC 2 cut(s) 71, 80
BstAFI CTTAAG 1 cut(s) 1141
BstAUI TGTACA 1 cut(s) 1236
BstBAI YACGTR 2 cut(s) 1264, 1268
BstC8I GCNNGC 5 cut(s) 330, 409, 702, 1338, 1389
BstDEI CTNAG 3 cut(s) 228, 243, 1457
BstF5I GGATG 4 cut(s) 136, 466, 595, 1004
BstH2I RGCGCY 1 cut(s) 707
BstHHI GCGC 1 cut(s) 706
BstKTI GATC 2 cut(s) 634, 1307
BstMBI GATC 2 cut(s) 631, 1304
BstMCI CGRYCG 1 cut(s) 389
BstMWI GCNNNNNNNGC 3 cut(s) 338, 1295, 1364
BstNI CCWGG 5 cut(s) 94, 458, 522, 597, 945
BstSCI CCNGG 7 cut(s) 92, 187, 456, 520, 595, 860, 943
BstSFI CTRYAG 1 cut(s) 504
BstSNI TACGTA 1 cut(s) 1264
BstV1I GCAGC 1 cut(s) 1276
BstZI CGGCCG 1 cut(s) 386
BsuRI GGCC 4 cut(s) 332, 388, 700, 825
BtsCI GGATG 4 cut(s) 136, 466, 595, 1004
BtsIMutI CAGTG 4 cut(s) 5, 258, 887, 1476
Cac8I GCNNGC 5 cut(s) 330, 409, 702, 1338, 1389
CfoI GCGC 1 cut(s) 706
Cfr10I RCCGGY 2 cut(s) 204, 388
Cfr13I GGNCC 5 cut(s) 331, 369, 391, 698, 1372
Csp6I GTAC 2 cut(s) 1237, 1265
CspAI ACCGGT 1 cut(s) 204
CviAII CATG 4 cut(s) 108, 349, 810, 1206
CviQI GTAC 2 cut(s) 1237, 1265
DdeI CTNAG 3 cut(s) 228, 243, 1457
DpnI GATC 2 cut(s) 633, 1306
DpnII GATC 2 cut(s) 631, 1304
DrdI GACNNNNNNGTC 1 cut(s) 1481
DseDI GACNNNNNNGTC 1 cut(s) 1481
EaeI YGGCCR 1 cut(s) 386
EagI CGGCCG 1 cut(s) 386
Eam1104I CTCTTC 2 cut(s) 71, 80
EarI CTCTTC 2 cut(s) 71, 80
Ecl136II GAGCTC 1 cut(s) 1436
EclXI CGGCCG 1 cut(s) 386
Eco105I TACGTA 1 cut(s) 1264
Eco24I GRGCYC 1 cut(s) 1438
Eco47I GGWCC 3 cut(s) 369, 391, 1372
Eco52I CGGCCG 1 cut(s) 386
Eco53kI GAGCTC 1 cut(s) 1436
Eco57I CTGAAG 2 cut(s) 146, 166
EcoICRI GAGCTC 1 cut(s) 1436
EcoRII CCWGG 5 cut(s) 92, 456, 520, 595, 943
EcoT38I GRGCYC 1 cut(s) 1438
FaeI CATG 4 cut(s) 111, 352, 813, 1209
FaqI GGGAC 3 cut(s) 110, 620, 844
FatI CATG 4 cut(s) 107, 348, 809, 1205
FauI CCCGC 1 cut(s) 1025
FauNDI CATATG 1 cut(s) 1294
Fnu4HI GCNGC 2 cut(s) 642, 1290
FokI GGATG 4 cut(s) 143, 473, 602, 1011
FriOI GRGCYC 1 cut(s) 1438
Fsp4HI GCNGC 2 cut(s) 642, 1290
FspBI CTAG 3 cut(s) 198, 557, 957
GlaI GCGC 1 cut(s) 705
GluI GCNGC 2 cut(s) 642, 1290
HaeII RGCGCY 1 cut(s) 707
HaeIII GGCC 4 cut(s) 332, 388, 700, 825
HapII CCGG 4 cut(s) 189, 205, 389, 862
HhaI GCGC 1 cut(s) 706
Hin1II CATG 4 cut(s) 111, 352, 813, 1209
Hin6I GCGC 1 cut(s) 704
HinP1I GCGC 1 cut(s) 704
HincII GTYRAC 2 cut(s) 52, 780
HindII GTYRAC 2 cut(s) 52, 780
HinfI GANTC 5 cut(s) 89, 692, 785, 976, 1470
HpaII CCGG 4 cut(s) 189, 205, 389, 862
HphI GGTGA 1 cut(s) 550
Hpy166II GTNNAC 7 cut(s) 52, 372, 780, 941, 1237, 1239, 1250
Hpy188I TCNGA 5 cut(s) 80, 231, 244, 636, 981
Hpy188III TCNNGA 3 cut(s) 629, 725, 1076
Hpy8I GTNNAC 7 cut(s) 52, 372, 780, 941, 1237, 1239, 1250
Hpy99I CGWCG 1 cut(s) 778
HpyAV CCTTC 6 cut(s) 121, 829, 836, 1178, 1418, 1440
HpyCH4III ACNGT 4 cut(s) 9, 253, 882, 1098
HpyCH4IV ACGT 3 cut(s) 776, 1263, 1267
HpyCH4V TGCA 7 cut(s) 266, 422, 437, 761, 1158, 1292, 1298
HpyF10VI GCNNNNNNNGC 3 cut(s) 338, 1295, 1364
HpyF3I CTNAG 3 cut(s) 228, 243, 1457
HpySE526I ACGT 3 cut(s) 776, 1263, 1267
Hsp92II CATG 4 cut(s) 111, 352, 813, 1209
HspAI GCGC 1 cut(s) 704
Kzo9I GATC 2 cut(s) 631, 1304
LmnI GCTCC 2 cut(s) 1416, 1433
Lsp1109I GCAGC 1 cut(s) 1276
LweI GCATC 3 cut(s) 424, 1100, 1182
MaeI CTAG 3 cut(s) 198, 557, 957
MaeII ACGT 3 cut(s) 776, 1263, 1267
MaeIII GTNAC 4 cut(s) 381, 582, 715, 866
MalI GATC 2 cut(s) 633, 1306
MboI GATC 2 cut(s) 631, 1304
MboII GAAGA 7 cut(s) 58, 67, 172, 736, 1314, 1420, 1455
MhlI GDGCHC 3 cut(s) 306, 1421, 1438
MluCI AATT 9 cut(s) 193, 216, 442, 516, 541, 748, 762, 1070, 1147
MlyI GAGTC 1 cut(s) 701
MnlI CCTC 6 cut(s) 80, 83, 304, 717, 721, 1320
MroXI GAANNNNTTC 1 cut(s) 1150
MseI TTAA 5 cut(s) 104, 797, 918, 1068, 1142
MslI CAYNNNNRTG 1 cut(s) 377
MspCI CTTAAG 1 cut(s) 1141
MspI CCGG 4 cut(s) 189, 205, 389, 862
MspR9I CCNGG 7 cut(s) 94, 189, 458, 522, 597, 862, 945
MvaI CCWGG 5 cut(s) 94, 458, 522, 597, 945
MwoI GCNNNNNNNGC 3 cut(s) 338, 1295, 1364
NciI CCSGG 2 cut(s) 189, 862
NdeI CATATG 1 cut(s) 1294
NdeII GATC 2 cut(s) 631, 1304
NlaIII CATG 4 cut(s) 111, 352, 813, 1209
NlaIV GGNNCC 3 cut(s) 113, 852, 889
NmuCI GTSAC 4 cut(s) 381, 582, 715, 866
OliI CACNNNNGTG 1 cut(s) 377
PdmI GAANNNNTTC 1 cut(s) 1150
PfeI GAWTC 4 cut(s) 89, 785, 976, 1470
Pfl23II CGTACG 1 cut(s) 1264
PfoI TCCNGGA 1 cut(s) 456
PinAI ACCGGT 1 cut(s) 204
PkrI GCNGC 2 cut(s) 643, 1291
PleI GAGTC 1 cut(s) 700
PpsI GAGTC 1 cut(s) 700
Ppu21I YACGTR 2 cut(s) 1264, 1268
PshBI ATTAAT 1 cut(s) 918
PsiI TTATAA 1 cut(s) 345
Psp124BI GAGCTC 1 cut(s) 1438
Psp6I CCWGG 5 cut(s) 92, 456, 520, 595, 943
PspGI CCWGG 5 cut(s) 92, 456, 520, 595, 943
PspLI CGTACG 1 cut(s) 1264
PspN4I GGNNCC 3 cut(s) 113, 852, 889
PspPI GGNCC 5 cut(s) 331, 369, 391, 698, 1372
RsaI GTAC 2 cut(s) 1238, 1266
RsaNI GTAC 2 cut(s) 1237, 1265
RseI CAYNNNNRTG 1 cut(s) 377
SacI GAGCTC 1 cut(s) 1438
SaqAI TTAA 5 cut(s) 104, 797, 918, 1068, 1142
SatI GCNGC 2 cut(s) 642, 1290
Sau3AI GATC 2 cut(s) 631, 1304
Sau96I GGNCC 5 cut(s) 331, 369, 391, 698, 1372
SchI GAGTC 1 cut(s) 701
ScrFI CCNGG 7 cut(s) 94, 189, 458, 522, 597, 862, 945
SduI GDGCHC 3 cut(s) 306, 1421, 1438
SfaNI GCATC 3 cut(s) 424, 1100, 1182
SfcI CTRYAG 1 cut(s) 504
SinI GGWCC 3 cut(s) 369, 391, 1372
SmiMI CAYNNNNRTG 1 cut(s) 377
SmlI CTYRAG 1 cut(s) 1141
SmoI CTYRAG 1 cut(s) 1141
SnaBI TACGTA 1 cut(s) 1264
Sse9I AATT 9 cut(s) 193, 216, 442, 516, 541, 748, 762, 1070, 1147
SsiI CCGC 3 cut(s) 642, 1032, 1161
SspI AATATT 3 cut(s) 653, 916, 1350
SspMI CTAG 3 cut(s) 198, 557, 957
SstI GAGCTC 1 cut(s) 1438
StyD4I CCNGG 7 cut(s) 92, 187, 456, 520, 595, 860, 943
TaaI ACNGT 4 cut(s) 9, 253, 882, 1098
TaiI ACGT 3 cut(s) 779, 1266, 1270
TaqI TCGA 3 cut(s) 168, 1176, 1473
TaqII GACCGA 1 cut(s) 797
TasI AATT 9 cut(s) 193, 216, 442, 516, 541, 748, 762, 1070, 1147
TatI WGTACW 1 cut(s) 1236
TauI GCSGC 1 cut(s) 644
TfiI GAWTC 4 cut(s) 89, 785, 976, 1470
Tru1I TTAA 5 cut(s) 104, 797, 918, 1068, 1142
Tru9I TTAA 5 cut(s) 104, 797, 918, 1068, 1142
TscAI CASTG 4 cut(s) 12, 258, 887, 1483
TseFI GTSAC 4 cut(s) 381, 582, 715, 866
TseI GCWGC 1 cut(s) 1289
Tsp45I GTSAC 4 cut(s) 381, 582, 715, 866
TspDTI ATGAA 4 cut(s) 365, 486, 542, 1197
TspRI CASTG 4 cut(s) 12, 258, 887, 1483
Vha464I CTTAAG 1 cut(s) 1141
VpaK11BI GGWCC 3 cut(s) 369, 391, 1372
VspI ATTAAT 1 cut(s) 918
XapI RAATTY 5 cut(s) 193, 216, 442, 516, 1070
XmnI GAANNNNTTC 1 cut(s) 1150
XspI CTAG 3 cut(s) 198, 557, 957
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.