Rroxscaffold_2G00113870

serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
OG0000112
Physical Location & Seq
Reverse (-)
39642663 .. 39645881
3219 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00113870.1

Sequence Viewer

Length: 1806 bp
ATGTACAAGGGTTTGAGTAAGTATTACCGAACTCAACCAGGGCCAACGCCTGGTTTGGTCACTAGTCAAGAGGAAACTTATTATTCCATGAATGAAACCAATGCAATTACAAGAGTAACAGTGACTAATTCTGCGTTTGAGCGCCTTCATTGGGATGATGATGGCCTTCAATGGAAGGTAGACTTGTCTGCACCGACGTCCCGGTGTGAAAGGTATGGAGAGTGTGGTGCCAACAGCAGATGTAGCCCTGACAATGTATTAGCTTTTGAGTGTGAGTGTTTATCAGGGTATGTGCCTAATTCTATAAGTCATTGGAATCAGAAAAATGGGTCAGGTGGATGTGTGAGTAACCGACTTGGTTTGTTGAAGTGTGGAGATGGAGACGGGTTTGTAAAGGTGGCAAGAGTTAAATATCCAGACACATCAATAGCAGCATGGTTAAAATCAGGAATGGGTGCCAAAGAGTGTGAGCAGGAGTGCTTAAGAAATTGTTCTTGCAAAGCATATTTGAGCACTGAAAATGAAGGGCTTGTTGATTGCTTGACATGGTATGATGACTTGATGGACATTTTAACGTACACAGAGTTAGGACAAGATCTCTACGTTCGTGTGAATGCAACCGTATTAGCTGCAAATGCCCGAAGATCACAAGGTTTCTTGGAAAGGAGGGGAATGCTGGCCATTCCAATACTGTCTGCTGTGCTGGCATTGGTACTAATCATTATGCTTCTCTATTGGTGGCGTAAGAAGAACAGGAACACAAAAGGCATAGATTTTGTGGAGGCAGAGGAGCTTGAGGAAAGTCAGAGACTCCCCGAATTGCAATTTTTCGATCTTGACACAATAATAGCAGCCACAGACAACTTCTCTCGTGTCAATGAACTTGGCCATGGTGGTTTTGGCTCCGTTTATAAGGGTCAGCTACCAAATGAACAAAAAGTTGCTGTGAAAAGATTGTCCAAAACTTCAGGACAAGGGATTGAGGAATTCAAAAATGAAGTTGCACTTATAGCAAGACTTCAACACAGGAATCTTGTGAAACTTTTAGGCTGTTGTATAAAGAGAGAAGAAAGGATGTTGGTCCTAGAATACATGCCTAACAAAAGCTTGGACTCCTTTCTGTTTGATAATAGAAGACGGTCCTTCTTGGATTGGAAAAAGCACTTTGAAATTATCAACGGGATTGCTCGTGGGATTCTATATCTTCACCAAGACTCAAGATTGAGGATTATCCATAGAGATCTAAAAACTAGCAATGTTCTACTAGATGATGAGATGAACCCAAAAATTTCTGAATTTGGCATGGCTAGAATATTCCATGGGGACAAACTGCAAGATAAGACGAACCGAATTTGGCTACATGTCACCGGAGTACGCAGTATTTGGGAGATTTTCCACGAAATCGATGTCTTTAGTTTTGGGATCATAATGTTGGAGATTGTAAGTGGGCAAAAAAACAGTAGTTATGGTATGGAGGATCCTTCCGTGAACTTAATAGGACATGTTTGGGACCTTTGGAGAGAAGGTAGAGCATTAGATATTGTTGATTCAACACCGAAGTTATGTCAGCCTAATGAAGTCATGAGATGCATACAAGTTGCGCTCTTGTGTGTACAAGAAGATTCAAAGGACCGACCTGCCATGTCAGCCATTGTTATCATGTTGAGTGGTGAAGCATCTCCTCCATTGCCTAAGCAGCCAGCATTTGTTTATAGAAGAGATTCCAGCGCTGATGTTGATCCATTATTTCCAAACGGATCTTATTCTATAAACGACTTGACAATAACTACAATGGAAACTCGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
B_lectin DUF3403 PAN_2 Pkinase Pkinase_Tyr S_locus_glycop

Protein Analysis

601

Amino Acids

68.16

Weight (kDa)

5.98

Isoelectric Point (pI)

41.06

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
S_locus_glycop PF00954 23 - 100 4.5e-13 S-locus glycoprotein domain
PAN_2 PF08276 124 - 190 8.3e-18 PAN-like domain
Pkinase PF00069 290 - 551 3.7e-36 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 292 - 553 6.4e-44 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000112)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g03320 FvH4_3g03322 FvH4_3g03323 FvH4_3g03340 FvH4_3g03350 FvH4_3g03351 FvH4_3g03370 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g06140 FvH4_6g00257 FvH4_6g00257 FvH4_6g00270 FvH4_6g00300 FvH4_6g20800 FvH4_6g20800 FvH4_6g20800 FvH4_6g20800 FvH4_6g20800
malus_domestica MD05G1232700.v1.1 MD05G1327700.v1.1 MD05G1327800.v1.1 MD05G1327900.v1.1 MD05G1328000.v1.1 MD05G1328200.v1.1 MD05G1328300.v1.1 MD05G1328500.v1.1 MD05G1332000.v1.1 MD05G1332100.v1.1 MD10G1307600.v1.1 MD10G1307800.v1.1
prunus_persica Prupe.4G031900_v2.0.a1 Prupe.4G032000_v2.0.a1 Prupe.4G032000_v2.0.a1 Prupe.4G032100_v2.0.a1 Prupe.4G032200_v2.0.a1 Prupe.4G032200_v2.0.a1 Prupe.4G032200_v2.0.a1
pyrus_communis pycom05g30180 pycom05g30190 pycom05g30200 pycom05g30210 pycom10g25920 pycom10g25930
rosa_chinensis RchiOBHm_Chr2g0130831 RchiOBHm_Chr2g0132531 RchiOBHm_Chr2g0132541 RchiOBHm_Chr3g0455681 RchiOBHm_Chr3g0476681 RchiOBHm_Chr3g0476761 RchiOBHm_Chr3g0476771 RchiOBHm_Chr3g0476791 RchiOBHm_Chr3g0476801 RchiOBHm_Chr3g0476811 RchiOBHm_Chr4g0413551 RchiOBHm_Chr4g0413561 RchiOBHm_Chr5g0002911 RchiOBHm_Chr5g0005071 RchiOBHm_Chr5g0005101 RchiOBHm_Chr5g0005111 RchiOBHm_Chr5g0005121 RchiOBHm_Chr5g0005131 RchiOBHm_Chr5g0005141 RchiOBHm_Chr5g0005161 RchiOBHm_Chr5g0005171 RchiOBHm_Chr5g0006341 RchiOBHm_Chr5g0046161 RchiOBHm_Chr5g0046171 RchiOBHm_Chr5g0046181 RchiOBHm_Chr5g0046221 RchiOBHm_Chr5g0046231 RchiOBHm_Chr7g0224061 RchiOBHm_Chr7g0224081 RchiOBHm_Chr7g0224101 RchiOBHm_Chr7g0224111 RchiOBHm_Chr7g0224121
rosa_laevigata RLG00000010193 RLG00000019146 RLG00000019148 RLG00000019149 RLG00000019150 RLG00000023750 RLG00000023751 RLG00000023753 RLG00000029486 RLG00000031068 RLG00000031069 RLG00000031284 RLG00000031285 RLG00000031286 RLG00000031289 RLG00000031290 RLG00000031291 RLG00000031292 RLG00000031293 RLG00000031294 RLG00000031295 RLG00000031296 RLG00000031297 RLG00000031363 RLG00000032618 RLG00000032619
rosa_multiflora Rmu_co8147584.1_g000001 Rmu_co8205828.1_g000001 Rmu_co8373645.1_g000001 Rmu_co8407679.1_g000001 Rmu_co8452561.1_g000001 Rmu_sc0001035.1_g000076 Rmu_sc0001884.1_g000026 Rmu_sc0001884.1_g000027 Rmu_sc0001884.1_g000035 Rmu_sc0002157.1_g000026 Rmu_sc0002399.1_g000006 Rmu_sc0002399.1_g000007 Rmu_sc0002883.1_g000010 Rmu_sc0003629.1_g000014 Rmu_sc0003884.1_g000004 Rmu_sc0007865.1_g000005 Rmu_sc0008085.1_g000013 Rmu_sc0008085.1_g000014 Rmu_sc0008085.1_g000016 Rmu_sc0008085.1_g000018 Rmu_sc0008432.1_g000004 Rmu_sc0008714.1_g000002 Rmu_sc0009296.1_g000008 Rmu_sc0009296.1_g000009 Rmu_sc0009296.1_g000011 Rmu_sc0010281.1_g000001 Rmu_sc0010281.1_g000002 Rmu_sc0010714.1_g000011 Rmu_sc0010714.1_g000016 Rmu_sc0011169.1_g000001 Rmu_sc0011169.1_g000007 Rmu_sc0013603.1_g000006 Rmu_sc0020478.1_g000003 Rmu_sc0020478.1_g000007 Rmu_sc0025106.1_g000012 Rmu_sc0032709.1_g000001 Rmu_sc0033028.1_g000001
rosa_roxburghii Rroxscaffold_1G00069570 Rroxscaffold_1G00069610 Rroxscaffold_1G00069620 Rroxscaffold_1G00070480 Rroxscaffold_1G00070490 Rroxscaffold_1G00070500 Rroxscaffold_1G00070510 Rroxscaffold_1G00070520 Rroxscaffold_1G00070530 Rroxscaffold_1G00070540 Rroxscaffold_1G00070550 Rroxscaffold_1G00070590 Rroxscaffold_1G00072950 Rroxscaffold_1G00073080 Rroxscaffold_2G00111810 Rroxscaffold_2G00111820 Rroxscaffold_2G00113530 Rroxscaffold_2G00113870 Rroxscaffold_6G00405010 Rroxscaffold_6G00405020 Rroxscaffold_6G00423590 Rroxscaffold_6G00424100
rosa_rugosa Rorug02G0293200 Rorug02G0293300 Rorug02G0293400 Rorug02G0305900 Rorug02G0305900 Rorug03G0009100 Rorug03G0157000 Rorug03G0157000 Rorug03G0304900 Rorug04G0400500 Rorug04G0415200 Rorug04G0415300 Rorug04G0415400 Rorug04G0415500 Rorug04G0421100 Rorug05G0068000 Rorug05G0068100 Rorug05G0068200 Rorug05G0068500 Rorug05G0224600 Rorug05G0224700
rosa_samantha Rh2CG331700 Rh2CG341600 Rh2CG341700 Rh2DG381200 Rh3DG071200 Rh3DG233400 Rh3DG233500 Rh3DG233600 Rh5AG043100 Rh5CG026000 Rh5CG047700 Rh5CG047800 Rh5CG047900 Rh5CG048000 Rh5CG048100 Rh5CG048300 Rh5CG056500 Rh5CG340500 Rh5CG340700 Rh5CG340800 Rh7AG365000
rosa_wichuraiana Rw0G002360 Rw0G002370 Rw0G012520 Rw0G018230 Rw0G019190 Rw2G027480 Rw2G029150 Rw3G005520 Rw3G005880 Rw3G005890 Rw3G018840 Rw3G018850 Rw3G018870 Rw3G018880 Rw3G020740 Rw5G002190 Rw5G004180 Rw5G004190 Rw5G004890 Rw5G013960 Rw5G014000 Rw5G028610 Rw7G030910 Rw7G030920

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 912
AatII GACGTC 1 cut(s) 200
Acc36I ACCTGC 1 cut(s) 1645
AccB1I GGYRCC 2 cut(s) 227, 455
AccB7I CCANNNNNTGG 1 cut(s) 50
AccI GTMKAC 1 cut(s) 180
AclWI GGATC 5 cut(s) 1430, 1472, 1485, 1733, 1765
AcoI YGGCCR 2 cut(s) 678, 886
AcsI RAATTY 4 cut(s) 986, 1287, 1295, 1350
AcuI CTGAAG 1 cut(s) 951
AcyI GRCGYC 1 cut(s) 197
AfaI GTAC 5 cut(s) 5, 578, 714, 1374, 1614
AfeI AGCGCT 1 cut(s) 1729
AfiI CCNNNNNNNGG 2 cut(s) 50, 151
AflII CTTAAG 1 cut(s) 481
AflIII ACRYGT 2 cut(s) 1360, 1501
AgsI TTSAA 7 cut(s) 170, 367, 991, 1022, 1169, 1551, 1626
AhlI ACTAGT 1 cut(s) 62
AjnI CCWGG 2 cut(s) 37, 49
AluBI AGCT 5 cut(s) 263, 629, 793, 922, 1107
AluI AGCT 5 cut(s) 263, 629, 793, 922, 1107
Alw21I GWGCWC 1 cut(s) 515
Alw26I GTCTC 2 cut(s) 375, 802
AlwI GGATC 5 cut(s) 1430, 1472, 1485, 1733, 1765
Aor51HI AGCGCT 1 cut(s) 1729
AoxI GGCC 4 cut(s) 41, 163, 678, 886
ApeKI GCWGC 4 cut(s) 431, 629, 851, 1696
ApoI RAATTY 4 cut(s) 986, 1287, 1295, 1350
ArsI GACNNNNNNTTYG 2 cut(s) 1392, 1424
Asp700I GAANNNNTTC 2 cut(s) 490, 1720
AspLEI GCGC 3 cut(s) 144, 1603, 1730
AspS9I GGNCC 5 cut(s) 41, 1081, 1140, 1510, 1630
AsuC2I CCSGG 1 cut(s) 202
AsuHPI GGTGA 3 cut(s) 1199, 1357, 1682
AvaII GGWCC 4 cut(s) 1081, 1140, 1510, 1630
BalI TGGCCA 2 cut(s) 680, 888
BamHI GGATCC 1 cut(s) 1477
BanI GGYRCC 2 cut(s) 227, 455
BauI CACGAG 2 cut(s) 870, 1188
BbsI GAAGAC 1 cut(s) 1141
Bbv12I GWGCWC 1 cut(s) 515
BbvI GCAGC 4 cut(s) 443, 616, 863, 1708
BccI CCATC 3 cut(s) 155, 371, 556
BciT130I CCWGG 2 cut(s) 39, 51
BcnI CCSGG 1 cut(s) 202
BcoDI GTCTC 2 cut(s) 375, 802
BcuI ACTAGT 1 cut(s) 62
BfaI CTAG 5 cut(s) 63, 1085, 1251, 1265, 1308
BfoI RGCGCY 2 cut(s) 145, 1731
BfrI CTTAAG 1 cut(s) 481
BfuAI ACCTGC 1 cut(s) 1645
BglII AGATCT 2 cut(s) 595, 1240
BisI GCNGC 4 cut(s) 432, 630, 852, 1697
BlsI GCNGC 4 cut(s) 433, 631, 853, 1698
Bme1390I CCNGG 3 cut(s) 39, 51, 202
Bme18I GGWCC 4 cut(s) 1081, 1140, 1510, 1630
BmgT120I GGNCC 5 cut(s) 41, 1081, 1140, 1510, 1630
BmiI GGNNCC 5 cut(s) 229, 457, 904, 1479, 1511
BmrFI CCNGG 3 cut(s) 39, 51, 202
BmsI GCATC 2 cut(s) 1577, 1685
BpiI GAAGAC 1 cut(s) 1141
Bpu10I CCTNAGC 1 cut(s) 1692
BpuEI CTTGAG 2 cut(s) 815, 1201
BpuMI CCSGG 1 cut(s) 202
Bsa29I ATCGAT 1 cut(s) 1404
BsaBI GATNNNNATC 1 cut(s) 1737
BsaHI GRCGYC 1 cut(s) 197
BsaJI CCNNGG 3 cut(s) 38, 889, 1318
BsaWI WCCGGW 1 cut(s) 1367
BsaXI ACNNNNNCTCC 2 cut(s) 1510, 1540
Bsc4I CCNNNNNNNGG 2 cut(s) 50, 151
Bse3DI GCAATG 2 cut(s) 1261, 1685
Bse8I GATNNNNATC 1 cut(s) 1737
BseBI CCWGG 2 cut(s) 39, 51
BseCI ATCGAT 1 cut(s) 1404
BseDI CCNNGG 3 cut(s) 38, 889, 1318
BseGI GGATG 3 cut(s) 160, 344, 1080
BseJI GATNNNNATC 1 cut(s) 1737
BseLI CCNNNNNNNGG 2 cut(s) 50, 151
BseMI GCAATG 2 cut(s) 1261, 1685
BseRI GAGGAG 2 cut(s) 803, 1671
BseXI GCAGC 4 cut(s) 443, 616, 863, 1708
BsgI GTGCAG 1 cut(s) 174
BshFI GGCC 4 cut(s) 43, 165, 680, 888
BshNI GGYRCC 2 cut(s) 227, 455
BshVI ATCGAT 1 cut(s) 1404
BsiHKAI GWGCWC 1 cut(s) 515
BsiSI CCGG 2 cut(s) 202, 1368
BslFI GGGAC 3 cut(s) 184, 1337, 1523
BslI CCNNNNNNNGG 2 cut(s) 50, 151
BsmAI GTCTC 2 cut(s) 375, 802
BsmBI CGTCTC 1 cut(s) 375
BsmFI GGGAC 3 cut(s) 184, 1337, 1523
BsmI GAATGC 2 cut(s) 619, 678
BsnI GGCC 4 cut(s) 43, 165, 680, 888
Bsp1286I GDGCHC 1 cut(s) 515
Bsp1407I TGTACA 2 cut(s) 3, 1612
Bsp143I GATC 8 cut(s) 595, 644, 832, 1240, 1422, 1477, 1738, 1757
Bsp19I CCATGG 2 cut(s) 889, 1318
BspANI GGCC 4 cut(s) 43, 165, 680, 888
BspDI ATCGAT 1 cut(s) 1404
BspHI TCATGA 1 cut(s) 1581
BspLI GGNNCC 5 cut(s) 229, 457, 904, 1479, 1511
BspMI ACCTGC 1 cut(s) 1645
BspPI GGATC 5 cut(s) 1430, 1472, 1485, 1733, 1765
BspT107I GGYRCC 2 cut(s) 227, 455
BspTI CTTAAG 1 cut(s) 481
BsrDI GCAATG 2 cut(s) 1261, 1685
BsrGI TGTACA 2 cut(s) 3, 1612
BssECI CCNNGG 3 cut(s) 38, 889, 1318
BssMI GATC 8 cut(s) 595, 644, 832, 1240, 1422, 1477, 1738, 1757
BssNI GRCGYC 1 cut(s) 197
BssSI CACGAG 2 cut(s) 870, 1188
BssT1I CCWWGG 2 cut(s) 889, 1318
Bst2BI CACGAG 2 cut(s) 870, 1188
Bst2UI CCWGG 2 cut(s) 39, 51
Bst4CI ACNGT 5 cut(s) 121, 622, 693, 1140, 1460
Bst6I CTCTTC 1 cut(s) 1711
BstACI GRCGYC 1 cut(s) 197
BstAFI CTTAAG 1 cut(s) 481
BstAUI TGTACA 2 cut(s) 3, 1612
BstC8I GCNNGC 3 cut(s) 678, 705, 1701
BstDEI CTNAG 1 cut(s) 1692
BstDSI CCRYGG 2 cut(s) 889, 1318
BstF5I GGATG 3 cut(s) 160, 344, 1080
BstH2I RGCGCY 2 cut(s) 145, 1731
BstHHI GCGC 3 cut(s) 144, 1603, 1730
BstKTI GATC 8 cut(s) 598, 647, 835, 1243, 1425, 1480, 1741, 1760
BstMAI GTCTC 2 cut(s) 375, 802
BstMBI GATC 8 cut(s) 595, 644, 832, 1240, 1422, 1477, 1738, 1757
BstMWI GCNNNNNNNGC 6 cut(s) 243, 635, 704, 1010, 1646, 1696
BstNI CCWGG 2 cut(s) 39, 51
BstNSI RCATGY 3 cut(s) 1096, 1364, 1505
BstSCI CCNGG 3 cut(s) 37, 49, 200
BstV1I GCAGC 4 cut(s) 443, 616, 863, 1708
BstV2I GAAGAC 1 cut(s) 1141
BstX2I RGATCY 4 cut(s) 595, 1240, 1477, 1757
BstYI RGATCY 4 cut(s) 595, 1240, 1477, 1757
Bsu15I ATCGAT 1 cut(s) 1404
BsuRI GGCC 4 cut(s) 43, 165, 680, 888
BsuTUI ATCGAT 1 cut(s) 1404
BtgI CCRYGG 2 cut(s) 889, 1318
BtsCI GGATG 3 cut(s) 160, 344, 1080
BtsIMutI CAGTG 2 cut(s) 126, 513
BveI ACCTGC 1 cut(s) 1645
Cac8I GCNNGC 3 cut(s) 678, 705, 1701
CciI TCATGA 1 cut(s) 1581
CfoI GCGC 3 cut(s) 144, 1603, 1730
Cfr13I GGNCC 5 cut(s) 41, 1081, 1140, 1510, 1630
ClaI ATCGAT 1 cut(s) 1404
Csp6I GTAC 5 cut(s) 4, 577, 713, 1373, 1613
CviQI GTAC 5 cut(s) 4, 577, 713, 1373, 1613
DdeI CTNAG 1 cut(s) 1692
DpnI GATC 8 cut(s) 597, 646, 834, 1242, 1424, 1479, 1740, 1759
DpnII GATC 8 cut(s) 595, 644, 832, 1240, 1422, 1477, 1738, 1757
EaeI YGGCCR 2 cut(s) 678, 886
Eam1104I CTCTTC 1 cut(s) 1711
EarI CTCTTC 1 cut(s) 1711
Eco130I CCWWGG 2 cut(s) 889, 1318
Eco47I GGWCC 4 cut(s) 1081, 1140, 1510, 1630
Eco47III AGCGCT 1 cut(s) 1729
Eco57I CTGAAG 1 cut(s) 951
EcoO109I RGGNCCY 1 cut(s) 1510
EcoRI GAATTC 1 cut(s) 986
EcoRII CCWGG 2 cut(s) 37, 49
EcoT14I CCWWGG 2 cut(s) 889, 1318
EcoT22I ATGCAT 1 cut(s) 1592
ErhI CCWWGG 2 cut(s) 889, 1318
Esp3I CGTCTC 1 cut(s) 375
FalI AAGNNNNNCTT 4 cut(s) 167, 199, 990, 1022
FaqI GGGAC 3 cut(s) 184, 1337, 1523
FblI GTMKAC 1 cut(s) 180
Fnu4HI GCNGC 4 cut(s) 432, 630, 852, 1697
FokI GGATG 3 cut(s) 167, 351, 1087
Fsp4HI GCNGC 4 cut(s) 432, 630, 852, 1697
FspBI CTAG 5 cut(s) 63, 1085, 1251, 1265, 1308
GlaI GCGC 3 cut(s) 143, 1602, 1729
GluI GCNGC 4 cut(s) 432, 630, 852, 1697
HaeII RGCGCY 2 cut(s) 145, 1731
HaeIII GGCC 4 cut(s) 43, 165, 680, 888
HapII CCGG 2 cut(s) 202, 1368
HhaI GCGC 3 cut(s) 144, 1603, 1730
Hin1I GRCGYC 1 cut(s) 197
Hin6I GCGC 3 cut(s) 142, 1601, 1728
HinP1I GCGC 3 cut(s) 142, 1601, 1728
HindIII AAGCTT 1 cut(s) 1105
HinfI GANTC 9 cut(s) 316, 810, 1030, 1112, 1195, 1214, 1547, 1622, 1721
HpaII CCGG 2 cut(s) 202, 1368
HphI GGTGA 3 cut(s) 1199, 1357, 1682
Hpy166II GTNNAC 4 cut(s) 181, 579, 1489, 1613
Hpy188I TCNGA 3 cut(s) 321, 807, 1294
Hpy188III TCNNGA 7 cut(s) 68, 416, 447, 836, 969, 1218, 1582
Hpy8I GTNNAC 4 cut(s) 181, 579, 1489, 1613
Hpy99I CGWCG 1 cut(s) 199
HpyAV CCTTC 7 cut(s) 155, 169, 176, 518, 1153, 1491, 1517
HpyCH4III ACNGT 5 cut(s) 121, 622, 693, 1140, 1460
HpyCH4IV ACGT 3 cut(s) 197, 575, 603
HpyCH4V TGCA 9 cut(s) 104, 191, 498, 617, 632, 823, 1004, 1333, 1590
HpyF10VI GCNNNNNNNGC 6 cut(s) 243, 635, 704, 1010, 1646, 1696
HpyF3I CTNAG 1 cut(s) 1692
HpySE526I ACGT 3 cut(s) 197, 575, 603
Hsp92I GRCGYC 1 cut(s) 197
HspAI GCGC 3 cut(s) 142, 1601, 1728
Kzo9I GATC 8 cut(s) 595, 644, 832, 1240, 1422, 1477, 1738, 1757
LmnI GCTCC 2 cut(s) 790, 908
Lsp1109I GCAGC 4 cut(s) 443, 616, 863, 1708
LweI GCATC 2 cut(s) 1577, 1685
MaeI CTAG 5 cut(s) 63, 1085, 1251, 1265, 1308
MaeII ACGT 3 cut(s) 197, 575, 603
MaeIII GTNAC 5 cut(s) 58, 115, 121, 347, 1363
MalI GATC 8 cut(s) 597, 646, 834, 1242, 1424, 1479, 1740, 1759
MboI GATC 8 cut(s) 595, 644, 832, 1240, 1422, 1477, 1738, 1757
MboII GAAGA 7 cut(s) 654, 760, 1079, 1146, 1196, 1631, 1728
MflI RGATCY 4 cut(s) 595, 1240, 1477, 1757
MhlI GDGCHC 1 cut(s) 515
MlsI TGGCCA 2 cut(s) 680, 888
MluNI TGGCCA 2 cut(s) 680, 888
MlyI GAGTC 3 cut(s) 804, 1106, 1208
MmeI TCCRAC 1 cut(s) 1413
MnlI CCTC 9 cut(s) 64, 660, 775, 781, 790, 976, 1218, 1468, 1692
Mox20I TGGCCA 2 cut(s) 680, 888
Mph1103I ATGCAT 1 cut(s) 1592
MroXI GAANNNNTTC 2 cut(s) 490, 1720
MscI TGGCCA 2 cut(s) 680, 888
MseI TTAA 5 cut(s) 408, 440, 482, 572, 1493
MslI CAYNNNNRTG 1 cut(s) 153
Msp20I TGGCCA 2 cut(s) 680, 888
MspCI CTTAAG 1 cut(s) 481
MspI CCGG 2 cut(s) 202, 1368
MspR9I CCNGG 3 cut(s) 39, 51, 202
Mva1269I GAATGC 2 cut(s) 619, 678
MvaI CCWGG 2 cut(s) 39, 51
MwoI GCNNNNNNNGC 6 cut(s) 243, 635, 704, 1010, 1646, 1696
NciI CCSGG 1 cut(s) 202
NcoI CCATGG 2 cut(s) 889, 1318
NdeII GATC 8 cut(s) 595, 644, 832, 1240, 1422, 1477, 1738, 1757
NlaIV GGNNCC 5 cut(s) 229, 457, 904, 1479, 1511
NmuCI GTSAC 3 cut(s) 58, 121, 1363
NsiI ATGCAT 1 cut(s) 1592
NspI RCATGY 3 cut(s) 1096, 1364, 1505
PagI TCATGA 1 cut(s) 1581
PciI ACATGT 2 cut(s) 1360, 1501
PctI GAATGC 2 cut(s) 619, 678
PdmI GAANNNNTTC 2 cut(s) 490, 1720
PfeI GAWTC 6 cut(s) 316, 1030, 1195, 1547, 1622, 1721
PflMI CCANNNNNTGG 1 cut(s) 50
PkrI GCNGC 4 cut(s) 433, 631, 853, 1698
PleI GAGTC 3 cut(s) 804, 1106, 1208
PpsI GAGTC 3 cut(s) 804, 1106, 1208
PpuMI RGGWCCY 1 cut(s) 1510
PscI ACATGT 2 cut(s) 1360, 1501
PsiI TTATAA 1 cut(s) 912
Psp5II RGGWCCY 1 cut(s) 1510
Psp6I CCWGG 2 cut(s) 37, 49
PspGI CCWGG 2 cut(s) 37, 49
PspN4I GGNNCC 5 cut(s) 229, 457, 904, 1479, 1511
PspPI GGNCC 5 cut(s) 41, 1081, 1140, 1510, 1630
PspPPI RGGWCCY 1 cut(s) 1510
PsuI RGATCY 4 cut(s) 595, 1240, 1477, 1757
RsaI GTAC 5 cut(s) 5, 578, 714, 1374, 1614
RsaNI GTAC 5 cut(s) 4, 577, 713, 1373, 1613
RseI CAYNNNNRTG 1 cut(s) 153
SaqAI TTAA 5 cut(s) 408, 440, 482, 572, 1493
SatI GCNGC 4 cut(s) 432, 630, 852, 1697
Sau3AI GATC 8 cut(s) 595, 644, 832, 1240, 1422, 1477, 1738, 1757
Sau96I GGNCC 5 cut(s) 41, 1081, 1140, 1510, 1630
SchI GAGTC 3 cut(s) 804, 1106, 1208
ScrFI CCNGG 3 cut(s) 39, 51, 202
SduI GDGCHC 1 cut(s) 515
SfaNI GCATC 2 cut(s) 1577, 1685
SinI GGWCC 4 cut(s) 1081, 1140, 1510, 1630
SmiMI CAYNNNNRTG 1 cut(s) 153
SmlI CTYRAG 3 cut(s) 481, 794, 1216
SmoI CTYRAG 3 cut(s) 481, 794, 1216
SpeI ACTAGT 1 cut(s) 62
SspI AATATT 1 cut(s) 1314
SspMI CTAG 5 cut(s) 63, 1085, 1251, 1265, 1308
StyD4I CCNGG 3 cut(s) 37, 49, 200
StyI CCWWGG 2 cut(s) 889, 1318
TaaI ACNGT 5 cut(s) 121, 622, 693, 1140, 1460
TaiI ACGT 3 cut(s) 200, 578, 606
TaqI TCGA 3 cut(s) 831, 1404, 1801
TaqII GACCGA 1 cut(s) 1647
TatI WGTACW 2 cut(s) 3, 1612
TfiI GAWTC 6 cut(s) 316, 1030, 1195, 1547, 1622, 1721
Tru1I TTAA 5 cut(s) 408, 440, 482, 572, 1493
Tru9I TTAA 5 cut(s) 408, 440, 482, 572, 1493
TscAI CASTG 2 cut(s) 126, 520
TseFI GTSAC 3 cut(s) 58, 121, 1363
TseI GCWGC 4 cut(s) 431, 629, 851, 1696
Tsp45I GTSAC 3 cut(s) 58, 121, 1363
TspDTI ATGAA 9 cut(s) 104, 108, 137, 537, 894, 945, 1011, 1292, 1590
TspGWI ACGGA 3 cut(s) 895, 1474, 1770
TspRI CASTG 2 cut(s) 126, 520
Van91I CCANNNNNTGG 1 cut(s) 50
Vha464I CTTAAG 1 cut(s) 481
VpaK11BI GGWCC 4 cut(s) 1081, 1140, 1510, 1630
XapI RAATTY 4 cut(s) 986, 1287, 1295, 1350
XceI RCATGY 3 cut(s) 1096, 1364, 1505
XcmI CCANNNNNNNNNTGG 1 cut(s) 896
XmiI GTMKAC 1 cut(s) 180
XmnI GAANNNNTTC 2 cut(s) 490, 1720
XspI CTAG 5 cut(s) 63, 1085, 1251, 1265, 1308
ZraI GACGTC 1 cut(s) 198
Zsp2I ATGCAT 1 cut(s) 1592
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.