pycom10g25920

serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr10
Physical Location & Seq
Reverse (-)
27375163 .. 27378392
3230 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom10g25920.2

Sequence Viewer

Length: 2331 bp
ATGGAAATGCCCAGAAAAATGTTAATGAAAGCTTTGCTTCTTCTGTTCTTCCTCCTCTTCCCATTTTGCACGTCCGTCGACACCATAGCAACGGACCAACATGTCAAGGACGGTGACTTGCTGGTGTCTAAAGATAATATCTTCGAACTAGGGTTCTTCAGCCCCGGGAACTCCAGGTACAGATATGTCGGAATTTGGTATGCTCAAAAAGATCAAAAAGCAGTGGTTTGGGTTGCAAACAGAAACAACCCCATCAATGATACCTCTGGAGTCCTTACTATAGACAGGGCTCAGCTGTTAGATTCTGGAAATCTAGTTCTTTTCCAAGATAACAAAAGTGAAAGTTTTATGTGGCAGAGTTTTGATCATCCTACAGATACTCTCCTTCCGGGTATGAAACTTGGCTTCAATTGGAAAACGGGGATACAATGGGTCTTAACATCTTGGAAGTCACAAGATGACCCTGGAACTGGGGACTACACTGTTAGGCTCCGTTCCAATCAGCATTTCAAACCCCAATATTTTGTTACTTATAAAGGTTTGACTCCATATTGGCGAAGTGATCCACTGGAAGACCCTAGTTTTGTCAGTAATCAGGACGAAATGTATTACTTAATTCAAAGCGATACCACTCCAATAAGGGTGGTCTTGAATGATTCTGGGTTACTGCAACACCTGAGGTGGAACGACGCAGATAGCAAATGGAAGGAAATCTGGTCTGCGCCAAAATATCGGTGTGACCAGTATGGACAGTGTGGTGCCAACAGCAAATGTAGCCCTGACAATATCAATTTATTCGAGTGTGCGTGCCTGCCAGGGTATGAACCAAAGTCTGTCAATGATTGGAATAGGAGAGATGGGTCAGGTGGTTGTGTCAGTAAACGAGTTGCGGTGTCAAAGTGTGGGAACGGAGAGGGGTTCATGAAAGTGGCACGAGTTAAAGATCCTGACACAATGAAAGCAGCACGGTTGGAAAACAGTACAAGTGACAAAGAGTGCAAGCAGGTGTGCTTAAGAAATTGTTCTTGCACTGCATATATGACCATAGAAGCTGAAGGGCGCATTGATTGCTTGACATGGTATGGTGAGTTGCTGGACATTTTAGTGCACACACAGGTAGGGCGAGATCTACATGTTCGTGTGGACAAAATCGAATTAGCTGAAAATTCCAGAAACTCAAAAGGTTTGCTTAAAAGGAGGGGTATGCTGGCTATTCTGATGTTGTCTGTTCTTCTGGCATTGATACTAATCCTTGCGTTGTCCTGTTGGCGGCTCAAGAAAAAGAGGAAGACGAAAGATGAACTTGAAGAAACCAGAAGACACCCTGAATTGCAATTTTTCAATCTGAGCACGATAATAGCAGCTACGGACAATTTCTCTTCCGTCAATAAACTTGGCCAAGGTGGTTTTGGTACGGTTTATAAGGGCCAGTTACCAAATGATGATCGGATTATTGCTGTAAAAAGATTGTCCAGAACTTCAGGACAAGGGGTTGAAGAATTCAAAAATGAAGTTGCGCTGATAGCAAGACTTCAACACAGGAACCTCGTGAAACTTTTAGGCTGTTGTATAAGGGGAGAAGAAAGGATGTTGATCCTGGAACACTTGCCGAACAAGAGCTTGGACTACTTTCTTTTTGATCATACAAGAAGGTCCTTGTTGGATTGGAAAAAACGTTTTGAAATCGTCAACGGGGTTGCTCGTGGGATTCTGTATCTCCATCAGGACTCAAGACTTAGGATTATCCACAGGGATCTAAAAACCAGTAATGTTCTTCTAGATGCTGAGTTGAACCCGAAAATCTCAGATTTCGGCATGGCAAGGATATTCCATGGGGACCAACTGCAGGATAAGACCAGCAGAATTGTCGGAACATATGGATATATGTCACCAGAATATGCAGTGTTTGGGAGGTATTCAACGAAATCGGATGTATTTAGTTTTGGGATCATCTTATTGGAGATTGTAAGCGGAAGTAAAAACAATGGTTCGTATCAGGAGGATCATTCCGTGAACTTGATAGGACATGTTTGGCAGCTGTGGAGAGAAGACAGAGCCTTAGAAATCGTGGATTCGTCATTGGAGTCGTATCAATCAGATGAAGTCATGCGATGCATTCAAGTCGGGCTCTTGTGCGTTCAAGAAGATTCAAAGGACCGACCGACTATGTCAGCAGTTGTATTCATGTTGAGTGGTGAAGCATCTCCACCATCTCCTCAGCAGCCTGCATTTGTCTTCAGAAAAAGTTCATGCAGTGTTGCTGATCCATCAATTCCGAAAGGATTATATTCTGTTGACGATTTCACAATAACTAGAGTTGAAGCTCGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

777

Amino Acids

88.37

Weight (kDa)

8.25

Isoelectric Point (pI)

42.7

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000112)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g03320 FvH4_3g03322 FvH4_3g03323 FvH4_3g03340 FvH4_3g03350 FvH4_3g03351 FvH4_3g03370 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g06140 FvH4_6g00257 FvH4_6g00257 FvH4_6g00270 FvH4_6g00300 FvH4_6g20800 FvH4_6g20800 FvH4_6g20800 FvH4_6g20800 FvH4_6g20800
malus_domestica MD05G1232700.v1.1 MD05G1327700.v1.1 MD05G1327800.v1.1 MD05G1327900.v1.1 MD05G1328000.v1.1 MD05G1328200.v1.1 MD05G1328300.v1.1 MD05G1328500.v1.1 MD05G1332000.v1.1 MD05G1332100.v1.1 MD10G1307600.v1.1 MD10G1307800.v1.1
prunus_persica Prupe.4G031900_v2.0.a1 Prupe.4G032000_v2.0.a1 Prupe.4G032000_v2.0.a1 Prupe.4G032100_v2.0.a1 Prupe.4G032200_v2.0.a1 Prupe.4G032200_v2.0.a1 Prupe.4G032200_v2.0.a1
pyrus_communis pycom05g30180 pycom05g30190 pycom05g30200 pycom05g30210 pycom10g25920 pycom10g25930
rosa_chinensis RchiOBHm_Chr2g0130831 RchiOBHm_Chr2g0132531 RchiOBHm_Chr2g0132541 RchiOBHm_Chr3g0455681 RchiOBHm_Chr3g0476681 RchiOBHm_Chr3g0476761 RchiOBHm_Chr3g0476771 RchiOBHm_Chr3g0476791 RchiOBHm_Chr3g0476801 RchiOBHm_Chr3g0476811 RchiOBHm_Chr4g0413551 RchiOBHm_Chr4g0413561 RchiOBHm_Chr5g0002911 RchiOBHm_Chr5g0005071 RchiOBHm_Chr5g0005101 RchiOBHm_Chr5g0005111 RchiOBHm_Chr5g0005121 RchiOBHm_Chr5g0005131 RchiOBHm_Chr5g0005141 RchiOBHm_Chr5g0005161 RchiOBHm_Chr5g0005171 RchiOBHm_Chr5g0006341 RchiOBHm_Chr5g0046161 RchiOBHm_Chr5g0046171 RchiOBHm_Chr5g0046181 RchiOBHm_Chr5g0046221 RchiOBHm_Chr5g0046231 RchiOBHm_Chr7g0224061 RchiOBHm_Chr7g0224081 RchiOBHm_Chr7g0224101 RchiOBHm_Chr7g0224111 RchiOBHm_Chr7g0224121
rosa_laevigata RLG00000010193 RLG00000019146 RLG00000019148 RLG00000019149 RLG00000019150 RLG00000023750 RLG00000023751 RLG00000023753 RLG00000029486 RLG00000031068 RLG00000031069 RLG00000031284 RLG00000031285 RLG00000031286 RLG00000031289 RLG00000031290 RLG00000031291 RLG00000031292 RLG00000031293 RLG00000031294 RLG00000031295 RLG00000031296 RLG00000031297 RLG00000031363 RLG00000032618 RLG00000032619
rosa_multiflora Rmu_co8147584.1_g000001 Rmu_co8205828.1_g000001 Rmu_co8373645.1_g000001 Rmu_co8407679.1_g000001 Rmu_co8452561.1_g000001 Rmu_sc0001035.1_g000076 Rmu_sc0001884.1_g000026 Rmu_sc0001884.1_g000027 Rmu_sc0001884.1_g000035 Rmu_sc0002157.1_g000026 Rmu_sc0002399.1_g000006 Rmu_sc0002399.1_g000007 Rmu_sc0002883.1_g000010 Rmu_sc0003629.1_g000014 Rmu_sc0003884.1_g000004 Rmu_sc0007865.1_g000005 Rmu_sc0008085.1_g000013 Rmu_sc0008085.1_g000014 Rmu_sc0008085.1_g000016 Rmu_sc0008085.1_g000018 Rmu_sc0008432.1_g000004 Rmu_sc0008714.1_g000002 Rmu_sc0009296.1_g000008 Rmu_sc0009296.1_g000009 Rmu_sc0009296.1_g000011 Rmu_sc0010281.1_g000001 Rmu_sc0010281.1_g000002 Rmu_sc0010714.1_g000011 Rmu_sc0010714.1_g000016 Rmu_sc0011169.1_g000001 Rmu_sc0011169.1_g000007 Rmu_sc0013603.1_g000006 Rmu_sc0020478.1_g000003 Rmu_sc0020478.1_g000007 Rmu_sc0025106.1_g000012 Rmu_sc0032709.1_g000001 Rmu_sc0033028.1_g000001
rosa_roxburghii Rroxscaffold_1G00069570 Rroxscaffold_1G00069610 Rroxscaffold_1G00069620 Rroxscaffold_1G00070480 Rroxscaffold_1G00070490 Rroxscaffold_1G00070500 Rroxscaffold_1G00070510 Rroxscaffold_1G00070520 Rroxscaffold_1G00070530 Rroxscaffold_1G00070540 Rroxscaffold_1G00070550 Rroxscaffold_1G00070590 Rroxscaffold_1G00072950 Rroxscaffold_1G00073080 Rroxscaffold_2G00111810 Rroxscaffold_2G00111820 Rroxscaffold_2G00113530 Rroxscaffold_2G00113870 Rroxscaffold_6G00405010 Rroxscaffold_6G00405020 Rroxscaffold_6G00423590 Rroxscaffold_6G00424100
rosa_rugosa Rorug02G0293200 Rorug02G0293300 Rorug02G0293400 Rorug02G0305900 Rorug02G0305900 Rorug03G0009100 Rorug03G0157000 Rorug03G0157000 Rorug03G0304900 Rorug04G0400500 Rorug04G0415200 Rorug04G0415300 Rorug04G0415400 Rorug04G0415500 Rorug04G0421100 Rorug05G0068000 Rorug05G0068100 Rorug05G0068200 Rorug05G0068500 Rorug05G0224600 Rorug05G0224700
rosa_samantha Rh2CG331700 Rh2CG341600 Rh2CG341700 Rh2DG381200 Rh3DG071200 Rh3DG233400 Rh3DG233500 Rh3DG233600 Rh5AG043100 Rh5CG026000 Rh5CG047700 Rh5CG047800 Rh5CG047900 Rh5CG048000 Rh5CG048100 Rh5CG048300 Rh5CG056500 Rh5CG340500 Rh5CG340700 Rh5CG340800 Rh7AG365000
rosa_wichuraiana Rw0G002360 Rw0G002370 Rw0G012520 Rw0G018230 Rw0G019190 Rw2G027480 Rw2G029150 Rw3G005520 Rw3G005880 Rw3G005890 Rw3G018840 Rw3G018850 Rw3G018870 Rw3G018880 Rw3G020740 Rw5G002190 Rw5G004180 Rw5G004190 Rw5G004890 Rw5G013960 Rw5G014000 Rw5G028610 Rw7G030910 Rw7G030920

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 534, 1422
AarI CACCTGC 1 cut(s) 994
AasI GACNNNNNNGTC 1 cut(s) 101
Acc36I ACCTGC 1 cut(s) 994
AccB1I GGYRCC 1 cut(s) 758
AccI GTMKAC 1 cut(s) 78
AciI CCGC 3 cut(s) 890, 1270, 1971
AclI AACGTT 1 cut(s) 1675
AclWI GGATC 7 cut(s) 557, 938, 1588, 1761, 1955, 2010, 2258
AcoI YGGCCR 1 cut(s) 1396
AcsI RAATTY 3 cut(s) 192, 1165, 1499
AcuI CTGAAG 4 cut(s) 142, 1074, 1464, 2221
AfaI GTAC 3 cut(s) 179, 982, 1414
AfiI CCNNNNNNNGG 3 cut(s) 470, 1269, 1846
AflII CTTAAG 1 cut(s) 1012
AflIII ACRYGT 3 cut(s) 100, 1132, 2026
AjiI CACGTC 1 cut(s) 72
AjnI CCWGG 4 cut(s) 173, 463, 814, 1596
AjuI GAANNNNNNNTTGG 4 cut(s) 491, 523, 1604, 1636
AloI GAACNNNNNNTCC 2 cut(s) 300, 332
AluBI AGCT 8 cut(s) 32, 295, 1052, 1160, 1364, 1620, 2038, 2324
AluI AGCT 8 cut(s) 32, 295, 1052, 1160, 1364, 1620, 2038, 2324
Alw21I GWGCWC 2 cut(s) 1110, 1352
Alw44I GTGCAC 1 cut(s) 1106
AlwI GGATC 7 cut(s) 557, 938, 1588, 1761, 1955, 2010, 2258
Ama87I CYCGRG 1 cut(s) 164
AoxI GGCC 2 cut(s) 1396, 1426
ApaLI GTGCAC 1 cut(s) 1106
ApeKI GCWGC 4 cut(s) 962, 1361, 2035, 2221
ApoI RAATTY 3 cut(s) 192, 1165, 1499
ArsI GACNNNNNNTTYG 2 cut(s) 566, 598
Asp700I GAANNNNTTC 2 cut(s) 1021, 2245
AspLEI GCGC 3 cut(s) 724, 1062, 1519
AspS9I GGNCC 5 cut(s) 94, 1426, 1653, 1837, 2155
AsuC2I CCSGG 3 cut(s) 165, 166, 390
AsuHPI GGTGA 4 cut(s) 125, 1097, 1881, 2207
AsuII TTCGAA 1 cut(s) 144
AvaI CYCGRG 1 cut(s) 164
AvaII GGWCC 4 cut(s) 94, 1653, 1837, 2155
AxyI CCTNAGG 1 cut(s) 677
BaeGI GKGCMC 1 cut(s) 1110
BalI TGGCCA 1 cut(s) 1398
BanI GGYRCC 1 cut(s) 758
BanII GRGCYC 2 cut(s) 292, 2130
BauI CACGAG 3 cut(s) 933, 1547, 1701
BbsI GAAGAC 5 cut(s) 579, 1295, 1324, 2055, 2227
Bbv12I GWGCWC 2 cut(s) 1110, 1352
BbvCI CCTCAGC 1 cut(s) 2217
BbvI GCAGC 4 cut(s) 974, 1373, 2047, 2233
BccI CCATC 5 cut(s) 260, 851, 1728, 2218, 2275
BcgI CGANNNNNNTGC 6 cut(s) 58, 92, 1849, 1883, 2104, 2138
BciT130I CCWGG 4 cut(s) 175, 465, 816, 1598
BciVI GTATCC 1 cut(s) 417
BclI TGATCA 2 cut(s) 364, 1639
BcnI CCSGG 3 cut(s) 165, 166, 390
BfaI CTAG 5 cut(s) 149, 314, 579, 1778, 2313
BfmI CTRYAG 3 cut(s) 279, 372, 1844
BfrI CTTAAG 1 cut(s) 1012
BfuAI ACCTGC 1 cut(s) 994
BfuI GTATCC 1 cut(s) 417
BglII AGATCT 1 cut(s) 1126
BisI GCNGC 5 cut(s) 963, 1271, 1362, 2036, 2222
BlpI GCTNAGC 1 cut(s) 291
BlsI GCNGC 5 cut(s) 964, 1272, 1363, 2037, 2223
Bme1390I CCNGG 7 cut(s) 165, 166, 175, 390, 465, 816, 1598
Bme18I GGWCC 4 cut(s) 94, 1653, 1837, 2155
BmeT110I CYCGRG 1 cut(s) 164
BmgBI CACGTC 1 cut(s) 72
BmgT120I GGNCC 5 cut(s) 94, 1426, 1653, 1837, 2155
BmiI GGNNCC 4 cut(s) 491, 760, 1544, 1838
BmrFI CCNGG 7 cut(s) 165, 166, 175, 390, 465, 816, 1598
BmrI ACTGGG 1 cut(s) 480
BmsI GCATC 3 cut(s) 1771, 2102, 2210
BmuI ACTGGG 1 cut(s) 480
BpiI GAAGAC 5 cut(s) 579, 1295, 1324, 2055, 2227
BpmI CTGGAG 2 cut(s) 157, 288
Bpu10I CCTNAGC 1 cut(s) 2217
Bpu1102I GCTNAGC 1 cut(s) 291
Bpu14I TTCGAA 1 cut(s) 144
BpuEI CTTGAG 2 cut(s) 1259, 1714
BpuMI CCSGG 3 cut(s) 165, 166, 390
BsaBI GATNNNNATC 2 cut(s) 1247, 1592
BsaJI CCNNGG 6 cut(s) 163, 164, 463, 815, 1399, 1831
Bsc4I CCNNNNNNNGG 3 cut(s) 470, 1269, 1846
Bse1I ACTGG 5 cut(s) 475, 573, 742, 1429, 1764
Bse21I CCTNAGG 1 cut(s) 677
Bse8I GATNNNNATC 2 cut(s) 1247, 1592
BseBI CCWGG 4 cut(s) 175, 465, 816, 1598
BseDI CCNNGG 6 cut(s) 163, 164, 463, 815, 1399, 1831
BseGI GGATG 3 cut(s) 367, 1593, 1936
BseJI GATNNNNATC 2 cut(s) 1247, 1592
BseLI CCNNNNNNNGG 3 cut(s) 470, 1269, 1846
BseMII CTCAG 6 cut(s) 305, 668, 1337, 1776, 1818, 2231
BseNI ACTGG 5 cut(s) 475, 573, 742, 1429, 1764
BseRI GAGGAG 2 cut(s) 44, 2205
BseSI GKGCMC 1 cut(s) 1110
BseXI GCAGC 4 cut(s) 974, 1373, 2047, 2233
Bsh1285I CGRYCG 1 cut(s) 2162
BshFI GGCC 2 cut(s) 1398, 1428
BshNI GGYRCC 1 cut(s) 758
BsiEI CGRYCG 1 cut(s) 2162
BsiHKAI GWGCWC 2 cut(s) 1110, 1352
BsiHKCI CYCGRG 1 cut(s) 164
BsiSI CCGG 2 cut(s) 165, 389
BslFI GGGAC 2 cut(s) 488, 1850
BslI CCNNNNNNNGG 3 cut(s) 470, 1269, 1846
BsmFI GGGAC 2 cut(s) 488, 1850
BsmI GAATGC 1 cut(s) 2115
BsnI GGCC 2 cut(s) 1398, 1428
BsoBI CYCGRG 1 cut(s) 164
Bsp119I TTCGAA 1 cut(s) 144
Bsp1286I GDGCHC 4 cut(s) 292, 1110, 1352, 2130
Bsp1720I GCTNAGC 1 cut(s) 291
Bsp19I CCATGG 1 cut(s) 1831
BspACI CCGC 3 cut(s) 890, 1270, 1971
BspANI GGCC 2 cut(s) 1398, 1428
BspCNI CTCAG 6 cut(s) 304, 669, 1338, 1777, 1817, 2230
BspHI TCATGA 1 cut(s) 921
BspLI GGNNCC 4 cut(s) 491, 760, 1544, 1838
BspMAI CTGCAG 1 cut(s) 1848
BspMI ACCTGC 1 cut(s) 994
BspPI GGATC 7 cut(s) 557, 938, 1588, 1761, 1955, 2010, 2258
BspT104I TTCGAA 1 cut(s) 144
BspT107I GGYRCC 1 cut(s) 758
BspTI CTTAAG 1 cut(s) 1012
BsrI ACTGG 5 cut(s) 475, 573, 742, 1429, 1764
BssECI CCNNGG 6 cut(s) 163, 164, 463, 815, 1399, 1831
BssSI CACGAG 3 cut(s) 933, 1547, 1701
BssT1I CCWWGG 2 cut(s) 1399, 1831
Bst2BI CACGAG 3 cut(s) 933, 1547, 1701
Bst2UI CCWGG 4 cut(s) 175, 465, 816, 1598
Bst4CI ACNGT 6 cut(s) 113, 484, 753, 969, 980, 1417
Bst6I CTCTTC 2 cut(s) 62, 1384
BstAFI CTTAAG 1 cut(s) 1012
BstAPI GCANNNNNTGC 1 cut(s) 1068
BstBI TTCGAA 1 cut(s) 144
BstC8I GCNNGC 5 cut(s) 808, 812, 1001, 1209, 2226
BstDEI CTNAG 8 cut(s) 291, 677, 1346, 1736, 1785, 1804, 2059, 2217
BstDSI CCRYGG 1 cut(s) 1831
BstF5I GGATG 3 cut(s) 367, 1593, 1936
BstHHI GCGC 3 cut(s) 724, 1062, 1519
BstMCI CGRYCG 1 cut(s) 2162
BstMWI GCNNNNNNNGC 3 cut(s) 774, 1068, 1523
BstNI CCWGG 4 cut(s) 175, 465, 816, 1598
BstNSI RCATGY 3 cut(s) 104, 1136, 2030
BstSCI CCNGG 7 cut(s) 163, 164, 173, 388, 463, 814, 1596
BstSFI CTRYAG 3 cut(s) 279, 372, 1844
BstSLI GKGCMC 1 cut(s) 1110
BstV1I GCAGC 4 cut(s) 974, 1373, 2047, 2233
BstV2I GAAGAC 5 cut(s) 579, 1295, 1324, 2055, 2227
BstX2I RGATCY 3 cut(s) 943, 1126, 1753
BstYI RGATCY 3 cut(s) 943, 1126, 1753
Bsu36I CCTNAGG 1 cut(s) 677
BsuI GTATCC 1 cut(s) 417
BsuRI GGCC 2 cut(s) 1398, 1428
BtgI CCRYGG 1 cut(s) 1831
BtgZI GCGATG 1 cut(s) 2125
BtrI CACGTC 1 cut(s) 72
BtsCI GGATG 3 cut(s) 367, 1593, 1936
BtsI GCAGTG 4 cut(s) 228, 1029, 1908, 2260
BtsIMutI CAGTG 7 cut(s) 228, 480, 566, 758, 1029, 1908, 2260
BveI ACCTGC 1 cut(s) 994
Cac8I GCNNGC 5 cut(s) 808, 812, 1001, 1209, 2226
CciI TCATGA 1 cut(s) 921
CfoI GCGC 3 cut(s) 724, 1062, 1519
Cfr13I GGNCC 5 cut(s) 94, 1426, 1653, 1837, 2155
Cfr9I CCCGGG 1 cut(s) 164
CseI GACGC 1 cut(s) 698
Csp6I GTAC 3 cut(s) 178, 981, 1413
CspCI CAANNNNNGTGG 2 cut(s) 624, 659
CviQI GTAC 3 cut(s) 178, 981, 1413
DdeI CTNAG 8 cut(s) 291, 677, 1346, 1736, 1785, 1804, 2059, 2217
DrdI GACNNNNNNGTC 1 cut(s) 101
DseDI GACNNNNNNGTC 1 cut(s) 101
EaeI YGGCCR 1 cut(s) 1396
Eam1104I CTCTTC 2 cut(s) 62, 1384
EarI CTCTTC 2 cut(s) 62, 1384
Eco130I CCWWGG 2 cut(s) 1399, 1831
Eco24I GRGCYC 2 cut(s) 292, 2130
Eco47I GGWCC 4 cut(s) 94, 1653, 1837, 2155
Eco57I CTGAAG 4 cut(s) 142, 1074, 1464, 2221
Eco81I CCTNAGG 1 cut(s) 677
Eco88I CYCGRG 1 cut(s) 164
EcoO109I RGGNCCY 1 cut(s) 1653
EcoRI GAATTC 1 cut(s) 1499
EcoRII CCWGG 4 cut(s) 173, 463, 814, 1596
EcoT14I CCWWGG 2 cut(s) 1399, 1831
EcoT22I ATGCAT 1 cut(s) 2117
EcoT38I GRGCYC 2 cut(s) 292, 2130
ErhI CCWWGG 2 cut(s) 1399, 1831
FalI AAGNNNNNCTT 6 cut(s) 21, 53, 1173, 1205, 1287, 1319
FaqI GGGAC 2 cut(s) 488, 1850
FauNDI CATATG 1 cut(s) 1876
FbaI TGATCA 2 cut(s) 364, 1639
FblI GTMKAC 1 cut(s) 78
Fnu4HI GCNGC 5 cut(s) 963, 1271, 1362, 2036, 2222
FokI GGATG 3 cut(s) 354, 1600, 1943
FriOI GRGCYC 2 cut(s) 292, 2130
Fsp4HI GCNGC 5 cut(s) 963, 1271, 1362, 2036, 2222
FspBI CTAG 5 cut(s) 149, 314, 579, 1778, 2313
GlaI GCGC 3 cut(s) 723, 1061, 1518
GluI GCNGC 5 cut(s) 963, 1271, 1362, 2036, 2222
GsuI CTGGAG 2 cut(s) 157, 288
HaeIII GGCC 2 cut(s) 1398, 1428
HapII CCGG 2 cut(s) 165, 389
HgaI GACGC 1 cut(s) 698
HhaI GCGC 3 cut(s) 724, 1062, 1519
Hin6I GCGC 3 cut(s) 722, 1060, 1517
HinP1I GCGC 3 cut(s) 722, 1060, 1517
HincII GTYRAC 3 cut(s) 79, 1690, 2296
HindII GTYRAC 3 cut(s) 79, 1690, 2296
HindIII AAGCTT 1 cut(s) 30
HinfI GANTC 9 cut(s) 270, 302, 544, 656, 1708, 1727, 2072, 2084, 2147
HpaII CCGG 2 cut(s) 165, 389
HphI GGTGA 4 cut(s) 125, 1097, 1881, 2207
Hpy166II GTNNAC 7 cut(s) 79, 881, 1108, 1144, 1690, 2014, 2296
Hpy8I GTNNAC 7 cut(s) 79, 881, 1108, 1144, 1690, 2014, 2296
Hpy99I CGWCG 2 cut(s) 80, 692
HpyAV CCTTC 4 cut(s) 395, 700, 1049, 1644
HpyCH4III ACNGT 6 cut(s) 113, 484, 753, 969, 980, 1417
HpyCH4IV ACGT 2 cut(s) 71, 1675
HpyF10VI GCNNNNNNNGC 3 cut(s) 774, 1068, 1523
HpyF3I CTNAG 8 cut(s) 291, 677, 1346, 1736, 1785, 1804, 2059, 2217
HpySE526I ACGT 2 cut(s) 71, 1675
HspAI GCGC 3 cut(s) 722, 1060, 1517
Ksp22I TGATCA 2 cut(s) 364, 1639
LmnI GCTCC 1 cut(s) 495
Lsp1109I GCAGC 4 cut(s) 974, 1373, 2047, 2233
LweI GCATC 3 cut(s) 1771, 2102, 2210
MaeI CTAG 5 cut(s) 149, 314, 579, 1778, 2313
MaeII ACGT 2 cut(s) 71, 1675
MaeIII GTNAC 8 cut(s) 113, 450, 526, 663, 737, 986, 1431, 1887
MfeI CAATTG 1 cut(s) 409
MflI RGATCY 3 cut(s) 943, 1126, 1753
MhlI GDGCHC 4 cut(s) 292, 1110, 1352, 2130
MlsI TGGCCA 1 cut(s) 1398
MluNI TGGCCA 1 cut(s) 1398
MlyI GAGTC 4 cut(s) 279, 538, 1721, 2093
MmeI TCCRAC 4 cut(s) 169, 951, 1641, 1849
Mox20I TGGCCA 1 cut(s) 1398
Mph1103I ATGCAT 1 cut(s) 2117
MroXI GAANNNNTTC 2 cut(s) 1021, 2245
MscI TGGCCA 1 cut(s) 1398
MseI TTAA 6 cut(s) 23, 437, 614, 939, 1013, 1191
MslI CAYNNNNRTG 3 cut(s) 926, 1103, 1137
Msp20I TGGCCA 1 cut(s) 1398
MspA1I CMGCKG 2 cut(s) 295, 2038
MspCI CTTAAG 1 cut(s) 1012
MspI CCGG 2 cut(s) 165, 389
MspR9I CCNGG 7 cut(s) 165, 166, 175, 390, 465, 816, 1598
MunI CAATTG 1 cut(s) 409
Mva1269I GAATGC 1 cut(s) 2115
MvaI CCWGG 4 cut(s) 175, 465, 816, 1598
MwoI GCNNNNNNNGC 3 cut(s) 774, 1068, 1523
NciI CCSGG 3 cut(s) 165, 166, 390
NcoI CCATGG 1 cut(s) 1831
NdeI CATATG 1 cut(s) 1876
NlaIV GGNNCC 4 cut(s) 491, 760, 1544, 1838
NmuCI GTSAC 5 cut(s) 113, 450, 737, 986, 1887
NsiI ATGCAT 1 cut(s) 2117
NspI RCATGY 3 cut(s) 104, 1136, 2030
NspV TTCGAA 1 cut(s) 144
PagI TCATGA 1 cut(s) 921
PaqCI CACCTGC 1 cut(s) 994
PciI ACATGT 3 cut(s) 100, 1132, 2026
PctI GAATGC 1 cut(s) 2115
PdmI GAANNNNTTC 2 cut(s) 1021, 2245
PfeI GAWTC 5 cut(s) 302, 656, 1708, 2072, 2147
PflFI GACNNNGTC 1 cut(s) 2167
PfoI TCCNGGA 1 cut(s) 1596
PkrI GCNGC 5 cut(s) 964, 1272, 1363, 2037, 2223
PleI GAGTC 4 cut(s) 278, 538, 1721, 2092
PpsI GAGTC 4 cut(s) 278, 538, 1721, 2092
PpuMI RGGWCCY 1 cut(s) 1653
PscI ACATGT 3 cut(s) 100, 1132, 2026
PsiI TTATAA 2 cut(s) 534, 1422
Psp1406I AACGTT 1 cut(s) 1675
Psp5II RGGWCCY 1 cut(s) 1653
Psp6I CCWGG 4 cut(s) 173, 463, 814, 1596
PspGI CCWGG 4 cut(s) 173, 463, 814, 1596
PspN4I GGNNCC 4 cut(s) 491, 760, 1544, 1838
PspPI GGNCC 5 cut(s) 94, 1426, 1653, 1837, 2155
PspPPI RGGWCCY 1 cut(s) 1653
PsrI GAACNNNNNNTAC 2 cut(s) 161, 193
PstI CTGCAG 1 cut(s) 1848
PsuI RGATCY 3 cut(s) 943, 1126, 1753
PsyI GACNNNGTC 1 cut(s) 2167
PvuII CAGCTG 2 cut(s) 295, 2038
RsaI GTAC 3 cut(s) 179, 982, 1414
RsaNI GTAC 3 cut(s) 178, 981, 1413
RseI CAYNNNNRTG 3 cut(s) 926, 1103, 1137
SalI GTCGAC 1 cut(s) 77
SaqAI TTAA 6 cut(s) 23, 437, 614, 939, 1013, 1191
SatI GCNGC 5 cut(s) 963, 1271, 1362, 2036, 2222
Sau96I GGNCC 5 cut(s) 94, 1426, 1653, 1837, 2155
SchI GAGTC 4 cut(s) 279, 538, 1721, 2093
ScrFI CCNGG 7 cut(s) 165, 166, 175, 390, 465, 816, 1598
SduI GDGCHC 4 cut(s) 292, 1110, 1352, 2130
SfaNI GCATC 3 cut(s) 1771, 2102, 2210
SfcI CTRYAG 3 cut(s) 279, 372, 1844
SfuI TTCGAA 1 cut(s) 144
SinI GGWCC 4 cut(s) 94, 1653, 1837, 2155
SmaI CCCGGG 1 cut(s) 166
SmiMI CAYNNNNRTG 3 cut(s) 926, 1103, 1137
SmlI CTYRAG 3 cut(s) 1012, 1274, 1729
SmoI CTYRAG 3 cut(s) 1012, 1274, 1729
SsiI CCGC 3 cut(s) 890, 1270, 1971
SspI AATATT 1 cut(s) 521
SspMI CTAG 5 cut(s) 149, 314, 579, 1778, 2313
StyD4I CCNGG 7 cut(s) 163, 164, 173, 388, 463, 814, 1596
StyI CCWWGG 2 cut(s) 1399, 1831
TaaI ACNGT 6 cut(s) 113, 484, 753, 969, 980, 1417
TaiI ACGT 2 cut(s) 74, 1678
TaqI TCGA 5 cut(s) 78, 144, 798, 1152, 2326
TaqII GACCGA 2 cut(s) 2172, 2176
TatI WGTACW 1 cut(s) 980
TauI GCSGC 1 cut(s) 1273
TfiI GAWTC 5 cut(s) 302, 656, 1708, 2072, 2147
Tru1I TTAA 6 cut(s) 23, 437, 614, 939, 1013, 1191
Tru9I TTAA 6 cut(s) 23, 437, 614, 939, 1013, 1191
TscAI CASTG 7 cut(s) 228, 487, 573, 758, 1036, 1908, 2260
TseFI GTSAC 5 cut(s) 113, 450, 737, 986, 1887
TseI GCWGC 4 cut(s) 962, 1361, 2035, 2221
Tsp45I GTSAC 5 cut(s) 113, 450, 737, 986, 1887
TspGWI ACGGA 7 cut(s) 64, 107, 482, 924, 1372, 1382, 1999
TspMI CCCGGG 1 cut(s) 164
TspRI CASTG 7 cut(s) 228, 487, 573, 758, 1036, 1908, 2260
Tth111I GACNNNGTC 1 cut(s) 2167
Vha464I CTTAAG 1 cut(s) 1012
VneI GTGCAC 1 cut(s) 1106
VpaK11BI GGWCC 4 cut(s) 94, 1653, 1837, 2155
XapI RAATTY 3 cut(s) 192, 1165, 1499
XbaI TCTAGA 1 cut(s) 1777
XceI RCATGY 3 cut(s) 104, 1136, 2030
XcmI CCANNNNNNNNNTGG 1 cut(s) 1406
XmaI CCCGGG 1 cut(s) 164
XmiI GTMKAC 1 cut(s) 78
XmnI GAANNNNTTC 2 cut(s) 1021, 2245
XspI CTAG 5 cut(s) 149, 314, 579, 1778, 2313
Zsp2I ATGCAT 1 cut(s) 2117
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.