MD10G1307600.v1.1

serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr10
OG0000112
Physical Location & Seq
Reverse (-)
39282211 .. 39285478
3268 bp
Loading structure...
UTR
Exon/CDS
Intron
MD10G1307600.v1.1.491

Sequence Viewer

Length: 2475 bp
ATGTTAATGAAAGCTTTGCTTCTTGTGTTCTTCCTCCTCTTCCCATTTGGCACGTCCGTTGACACCATAGCAACGGACCAACATGTCAAGGACGGTGATTTGCTGGTGTCTAAAGATAATATCTTCGAACTAGGGTTCTTCAGCCCCGGGAACTCCAGGTACAGATATGTCGGAATTTGGTTTGCTCGAAAAGATCAAAAAGCAGTGGTTTGGGTTGCAAACAGAAACAACCCCATCAATGACACCTCTGGAATCCTTACTATAGACAGGTACGGAAGACTGCTTCTTTATGCTTACAATATGCAGGGTATTCCTATATGGTCTACAAATGTGACGGTCCAAACCGCAAACACTAGTTGCAGGGCTCAGCTGTTAGATTCTGGAAATCTAGTTCTTTTCCAAGATAACAAAAGTGAAAGTTTTATGTGGCAGAGTTTTGATCATCCTACAGATACTCTCCTTCAGGGTATGAAACTCGGCATCAATTGGAAAACAGGGATACAGTGGGTCTTAACATCTTGGAAGTCACAAGATGACCCTGGAACTGGGGACTACACTGTTAGGCTCCGTTCCAATCAACGTTTCAAACCCCAATATTTTGTTACTTATAAAGGTTTGACTCCATATTGGCGAAGTGATACACTGGAAGACCCTAGTTTTGTCATTAATCAGGACGAAATGTATTACTTAATTCAAAGCGATAGCACTCCAATAAGGGTGGTCTTGAATGATTCTGGGTTACTGCAACACCTGAGGTGGAACAATGCAGATAGCAAATGGAAGGAACTCTGGTCTGCGCCAAAATATCGGTGTGACCAGTATGGACAGTGTGGCGCCAACAGCAAATGTAGCCCTGACAATATCAATTTATTCGAGTGTGAGTGCCTGCCAGGGTATGAACCAAAGTCTGTCAATGATTGGAATAGGAGAGATGGGTCAGGTGGCTGTGTGAGTAAACGAGTTGCGGTGTCAAAGTGTGGGAACGGAGAGGGGTTCGTCAAAGTGGCACGAGTTAAAGATCCAGACACAATGAAAGTAGCACGGTTTGAAAACAGTACGAGTCACAAAGAGTGCGAGCAGGTGTGCTTAAGAAATTGTTCTTGCTCTGCATATATGATCATAGAAGCTGAAGGGCGCATTGATTGCTTGACATGGTATGGTGAGTTGCTGGACATTTTAGTGCACACACAGGTAGGGCGAGATCTGCATGTTCGTGTGGACAAAATCGAATTAGGTACCATTTCTTGCCATGGAAAAGTTGAGTTTCAGATTTTCAGAATATATGATACTTACTGTACTACTGCTGAAAATTCAAGAAACTCTAAAGGTTTTCTTAAAAGGAGGGGTATGCTGGCTGTTCTGATGTTGTCTGTTCTTCTGGCATTGATACTAATCCTTGCGTTGTCCTGTTGGTGGCTTAAGAAAAAGAGGAAGACAAAAGATGAACTTGAAGAAACCAGAAGACACCCTGAATTGCAATTTTTCAATCTGAGCACGATAATAGCAGCTACAGACAACTTCTCTTGCGTCAATAAACTTGGCCAAGGTGGTTTTGGTACGGTTTATAAGGGTCAGTTACCAAATGATGATCGGATTATTGCTGTAAAAAGATTGTCCAGAACTTCAGGACAAGGGGTTGAAGAATTCAAAAACGAAGTTGCGTTGATAGCAAAACTTCAACACAGGAACCTCGTGAAACTTTTAGGCTGTTGTATTAGGGGAGAAGAAAGGATGTTGATCCTGGAACACTTGCCGAACAAGAGCTTGGACTACTTTCTTTTTGATCATACAAGAAGGTCCTTGCTGGATTGGAAAAAACGTTTTGAAATCGTCAACGGGGTTGCTCGTGGGATTTTGTATCTCCATCAGGACTCAAGACTTAGGATTATCCACAGGGATCTAAAAACCAGTAATGTTCTTCTAGATGCTGAGTTGAACCCAAAAATCTCAGATTTCGGCATGGCAAGGATATTCCATGGGGACCAACTGCAGGATAAGACCAACAGAGTTGTCGGAACATATGGATATATGTCACCAGAATATGCAGTGTTTGGAAGGTATTCAACGAAATCAGATGTATTTAGTTTTGGGATCATCTTATTGGAGATTGTAAGCGGAAGTAAAAACAATGGTTCGTACCAGGAGGATCATTCCGTGAACTTGATAGGACATGTTTGGCAGCTGTGGAGAGAAGACAGAGCCTTAGAAATCGTGGATTCTTCATTGGACTCGTATCAGTCAGATGAAGTCATGCGATGCATTCAAGTCGGGCTCTTGTGCGTTCAAGAAGATTCAAAGGATCGACCGACTATGTCAGCAGTTGTATTCATGTTGAGTGGCGAAGCATCTCTACCATCTCCTCAGCAGCCTGCATTTGTCTTCAGAAAGAGTTCATGCAGTGTTGCTGGTCCATCAATTCCGAACGGATTATATTCTGGTGACGATTTCACAATAACTAGAGTTGAAGCTCGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
B_lectin DUF3403 PAN_2 Pkinase Pkinase_Tyr S_locus_glycop

Protein Analysis

825

Amino Acids

93.82

Weight (kDa)

8.3

Isoelectric Point (pI)

39.58

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 69 - 175 1.1e-35 D-mannose binding lectin
S_locus_glycop PF00954 223 - 303 1.6e-17 S-locus glycoprotein domain
PAN_2 PF08276 326 - 392 1.2e-15 PAN-like domain
Pkinase PF00069 509 - 774 8.6e-46 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 510 - 775 2e-48 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000112)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g03320 FvH4_3g03322 FvH4_3g03323 FvH4_3g03340 FvH4_3g03350 FvH4_3g03351 FvH4_3g03370 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g06140 FvH4_6g00257 FvH4_6g00257 FvH4_6g00270 FvH4_6g00300 FvH4_6g20800 FvH4_6g20800 FvH4_6g20800 FvH4_6g20800 FvH4_6g20800
malus_domestica MD05G1232700.v1.1 MD05G1327700.v1.1 MD05G1327800.v1.1 MD05G1327900.v1.1 MD05G1328000.v1.1 MD05G1328200.v1.1 MD05G1328300.v1.1 MD05G1328500.v1.1 MD05G1332000.v1.1 MD05G1332100.v1.1 MD10G1307600.v1.1 MD10G1307800.v1.1
prunus_persica Prupe.4G031900_v2.0.a1 Prupe.4G032000_v2.0.a1 Prupe.4G032000_v2.0.a1 Prupe.4G032100_v2.0.a1 Prupe.4G032200_v2.0.a1 Prupe.4G032200_v2.0.a1 Prupe.4G032200_v2.0.a1
pyrus_communis pycom05g30180 pycom05g30190 pycom05g30200 pycom05g30210 pycom10g25920 pycom10g25930
rosa_chinensis RchiOBHm_Chr2g0130831 RchiOBHm_Chr2g0132531 RchiOBHm_Chr2g0132541 RchiOBHm_Chr3g0455681 RchiOBHm_Chr3g0476681 RchiOBHm_Chr3g0476761 RchiOBHm_Chr3g0476771 RchiOBHm_Chr3g0476791 RchiOBHm_Chr3g0476801 RchiOBHm_Chr3g0476811 RchiOBHm_Chr4g0413551 RchiOBHm_Chr4g0413561 RchiOBHm_Chr5g0002911 RchiOBHm_Chr5g0005071 RchiOBHm_Chr5g0005101 RchiOBHm_Chr5g0005111 RchiOBHm_Chr5g0005121 RchiOBHm_Chr5g0005131 RchiOBHm_Chr5g0005141 RchiOBHm_Chr5g0005161 RchiOBHm_Chr5g0005171 RchiOBHm_Chr5g0006341 RchiOBHm_Chr5g0046161 RchiOBHm_Chr5g0046171 RchiOBHm_Chr5g0046181 RchiOBHm_Chr5g0046221 RchiOBHm_Chr5g0046231 RchiOBHm_Chr7g0224061 RchiOBHm_Chr7g0224081 RchiOBHm_Chr7g0224101 RchiOBHm_Chr7g0224111 RchiOBHm_Chr7g0224121
rosa_laevigata RLG00000010193 RLG00000019146 RLG00000019148 RLG00000019149 RLG00000019150 RLG00000023750 RLG00000023751 RLG00000023753 RLG00000029486 RLG00000031068 RLG00000031069 RLG00000031284 RLG00000031285 RLG00000031286 RLG00000031289 RLG00000031290 RLG00000031291 RLG00000031292 RLG00000031293 RLG00000031294 RLG00000031295 RLG00000031296 RLG00000031297 RLG00000031363 RLG00000032618 RLG00000032619
rosa_multiflora Rmu_co8147584.1_g000001 Rmu_co8205828.1_g000001 Rmu_co8373645.1_g000001 Rmu_co8407679.1_g000001 Rmu_co8452561.1_g000001 Rmu_sc0001035.1_g000076 Rmu_sc0001884.1_g000026 Rmu_sc0001884.1_g000027 Rmu_sc0001884.1_g000035 Rmu_sc0002157.1_g000026 Rmu_sc0002399.1_g000006 Rmu_sc0002399.1_g000007 Rmu_sc0002883.1_g000010 Rmu_sc0003629.1_g000014 Rmu_sc0003884.1_g000004 Rmu_sc0007865.1_g000005 Rmu_sc0008085.1_g000013 Rmu_sc0008085.1_g000014 Rmu_sc0008085.1_g000016 Rmu_sc0008085.1_g000018 Rmu_sc0008432.1_g000004 Rmu_sc0008714.1_g000002 Rmu_sc0009296.1_g000008 Rmu_sc0009296.1_g000009 Rmu_sc0009296.1_g000011 Rmu_sc0010281.1_g000001 Rmu_sc0010281.1_g000002 Rmu_sc0010714.1_g000011 Rmu_sc0010714.1_g000016 Rmu_sc0011169.1_g000001 Rmu_sc0011169.1_g000007 Rmu_sc0013603.1_g000006 Rmu_sc0020478.1_g000003 Rmu_sc0020478.1_g000007 Rmu_sc0025106.1_g000012 Rmu_sc0032709.1_g000001 Rmu_sc0033028.1_g000001
rosa_roxburghii Rroxscaffold_1G00069570 Rroxscaffold_1G00069610 Rroxscaffold_1G00069620 Rroxscaffold_1G00070480 Rroxscaffold_1G00070490 Rroxscaffold_1G00070500 Rroxscaffold_1G00070510 Rroxscaffold_1G00070520 Rroxscaffold_1G00070530 Rroxscaffold_1G00070540 Rroxscaffold_1G00070550 Rroxscaffold_1G00070590 Rroxscaffold_1G00072950 Rroxscaffold_1G00073080 Rroxscaffold_2G00111810 Rroxscaffold_2G00111820 Rroxscaffold_2G00113530 Rroxscaffold_2G00113870 Rroxscaffold_6G00405010 Rroxscaffold_6G00405020 Rroxscaffold_6G00423590 Rroxscaffold_6G00424100
rosa_rugosa Rorug02G0293200 Rorug02G0293300 Rorug02G0293400 Rorug02G0305900 Rorug02G0305900 Rorug03G0009100 Rorug03G0157000 Rorug03G0157000 Rorug03G0304900 Rorug04G0400500 Rorug04G0415200 Rorug04G0415300 Rorug04G0415400 Rorug04G0415500 Rorug04G0421100 Rorug05G0068000 Rorug05G0068100 Rorug05G0068200 Rorug05G0068500 Rorug05G0224600 Rorug05G0224700
rosa_samantha Rh2CG331700 Rh2CG341600 Rh2CG341700 Rh2DG381200 Rh3DG071200 Rh3DG233400 Rh3DG233500 Rh3DG233600 Rh5AG043100 Rh5CG026000 Rh5CG047700 Rh5CG047800 Rh5CG047900 Rh5CG048000 Rh5CG048100 Rh5CG048300 Rh5CG056500 Rh5CG340500 Rh5CG340700 Rh5CG340800 Rh7AG365000
rosa_wichuraiana Rw0G002360 Rw0G002370 Rw0G012520 Rw0G018230 Rw0G019190 Rw2G027480 Rw2G029150 Rw3G005520 Rw3G005880 Rw3G005890 Rw3G018840 Rw3G018850 Rw3G018870 Rw3G018880 Rw3G020740 Rw5G002190 Rw5G004180 Rw5G004190 Rw5G004890 Rw5G013960 Rw5G014000 Rw5G028610 Rw7G030910 Rw7G030920

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 609, 1566
AarI CACCTGC 1 cut(s) 1069
AasI GACNNNNNNGTC 1 cut(s) 83
Acc36I ACCTGC 1 cut(s) 1069
Acc65I GGTACC 1 cut(s) 1235
AccB1I GGYRCC 2 cut(s) 833, 1235
AccI GTMKAC 1 cut(s) 323
AciI CCGC 3 cut(s) 345, 965, 2115
AclI AACGTT 2 cut(s) 580, 1819
AclWI GGATC 6 cut(s) 1013, 1732, 1905, 2099, 2154, 2307
AcoI YGGCCR 1 cut(s) 1540
AcsI RAATTY 3 cut(s) 174, 1309, 1643
AcuI CTGAAG 5 cut(s) 124, 446, 1149, 1608, 2365
AcyI GRCGYC 1 cut(s) 834
AfaI GTAC 7 cut(s) 161, 272, 1057, 1237, 1297, 1558, 2138
AfiI CCNNNNNNNGG 3 cut(s) 545, 1413, 1990
AflII CTTAAG 2 cut(s) 1087, 1418
AflIII ACRYGT 2 cut(s) 82, 2170
AhlI ACTAGT 1 cut(s) 353
AjiI CACGTC 1 cut(s) 54
AjnI CCWGG 5 cut(s) 155, 538, 889, 1740, 2139
AjuI GAANNNNNNNTTGG 4 cut(s) 566, 598, 1748, 1780
AloI GAACNNNNNNTCC 2 cut(s) 375, 407
AluBI AGCT 7 cut(s) 14, 370, 1127, 1508, 1764, 2182, 2468
AluI AGCT 7 cut(s) 14, 370, 1127, 1508, 1764, 2182, 2468
Alw21I GWGCWC 2 cut(s) 1185, 1496
Alw44I GTGCAC 1 cut(s) 1181
AlwI GGATC 6 cut(s) 1013, 1732, 1905, 2099, 2154, 2307
Ama87I CYCGRG 1 cut(s) 146
AoxI GGCC 1 cut(s) 1540
ApaLI GTGCAC 1 cut(s) 1181
ApeKI GCWGC 3 cut(s) 1505, 2179, 2365
ApoI RAATTY 3 cut(s) 174, 1309, 1643
ArsI GACNNNNNNTTYG 2 cut(s) 641, 673
AseI ATTAAT 1 cut(s) 666
Asp700I GAANNNNTTC 3 cut(s) 1096, 2059, 2389
Asp718I GGTACC 1 cut(s) 1235
AspLEI GCGC 3 cut(s) 799, 836, 1137
AspS9I GGNCC 5 cut(s) 76, 337, 1797, 1981, 2408
AsuC2I CCSGG 2 cut(s) 147, 148
AsuHPI GGTGA 4 cut(s) 107, 1172, 2025, 2450
AsuII TTCGAA 1 cut(s) 126
AvaI CYCGRG 1 cut(s) 146
AvaII GGWCC 5 cut(s) 76, 337, 1797, 1981, 2408
AxyI CCTNAGG 1 cut(s) 752
BaeGI GKGCMC 1 cut(s) 1185
BalI TGGCCA 1 cut(s) 1542
BanI GGYRCC 2 cut(s) 833, 1235
BanII GRGCYC 2 cut(s) 367, 2274
BarI GAAGNNNNNNTAC 2 cut(s) 2334, 2366
BauI CACGAG 3 cut(s) 1008, 1691, 1845
BbsI GAAGAC 6 cut(s) 283, 654, 1439, 1468, 2199, 2371
Bbv12I GWGCWC 2 cut(s) 1185, 1496
BbvCI CCTCAGC 1 cut(s) 2361
BbvI GCAGC 3 cut(s) 1517, 2191, 2377
BccI CCATC 5 cut(s) 242, 926, 1872, 2362, 2419
BcgI CGANNNNNNTGC 2 cut(s) 2248, 2282
BciT130I CCWGG 5 cut(s) 157, 540, 891, 1742, 2141
BciVI GTATCC 1 cut(s) 492
BclI TGATCA 3 cut(s) 439, 1116, 1783
BcnI CCSGG 2 cut(s) 147, 148
BcuI ACTAGT 1 cut(s) 353
BfaI CTAG 6 cut(s) 131, 354, 389, 654, 1922, 2457
BfmI CTRYAG 4 cut(s) 261, 447, 1509, 1988
BfoI RGCGCY 1 cut(s) 837
BfrI CTTAAG 2 cut(s) 1087, 1418
BfuAI ACCTGC 1 cut(s) 1069
BfuI GTATCC 1 cut(s) 492
BglII AGATCT 1 cut(s) 1201
BisI GCNGC 3 cut(s) 1506, 2180, 2366
BlpI GCTNAGC 1 cut(s) 366
BlsI GCNGC 3 cut(s) 1507, 2181, 2367
Bme1390I CCNGG 7 cut(s) 147, 148, 157, 540, 891, 1742, 2141
Bme18I GGWCC 5 cut(s) 76, 337, 1797, 1981, 2408
BmeT110I CYCGRG 1 cut(s) 146
BmgBI CACGTC 1 cut(s) 54
BmgT120I GGNCC 5 cut(s) 76, 337, 1797, 1981, 2408
BmiI GGNNCC 5 cut(s) 566, 835, 1237, 1688, 1982
BmrFI CCNGG 7 cut(s) 147, 148, 157, 540, 891, 1742, 2141
BmrI ACTGGG 1 cut(s) 555
BmsI GCATC 4 cut(s) 489, 1915, 2246, 2354
BmuI ACTGGG 1 cut(s) 555
BpiI GAAGAC 6 cut(s) 283, 654, 1439, 1468, 2199, 2371
BpmI CTGGAG 1 cut(s) 139
Bpu10I CCTNAGC 1 cut(s) 2361
Bpu1102I GCTNAGC 1 cut(s) 366
Bpu14I TTCGAA 1 cut(s) 126
BpuEI CTTGAG 1 cut(s) 1858
BpuMI CCSGG 2 cut(s) 147, 148
BsaBI GATNNNNATC 2 cut(s) 1391, 1736
BsaHI GRCGYC 1 cut(s) 834
BsaJI CCNNGG 7 cut(s) 145, 146, 538, 890, 1249, 1543, 1975
Bsc4I CCNNNNNNNGG 3 cut(s) 545, 1413, 1990
Bse1I ACTGG 4 cut(s) 550, 648, 817, 1908
Bse21I CCTNAGG 1 cut(s) 752
Bse8I GATNNNNATC 2 cut(s) 1391, 1736
BseBI CCWGG 5 cut(s) 157, 540, 891, 1742, 2141
BseDI CCNNGG 7 cut(s) 145, 146, 538, 890, 1249, 1543, 1975
BseGI GGATG 2 cut(s) 442, 1737
BseJI GATNNNNATC 2 cut(s) 1391, 1736
BseLI CCNNNNNNNGG 3 cut(s) 545, 1413, 1990
BseMII CTCAG 6 cut(s) 380, 743, 1481, 1920, 1962, 2375
BseNI ACTGG 4 cut(s) 550, 648, 817, 1908
BseRI GAGGAG 2 cut(s) 26, 2349
BseSI GKGCMC 1 cut(s) 1185
BseXI GCAGC 3 cut(s) 1517, 2191, 2377
Bsh1285I CGRYCG 1 cut(s) 2306
BshFI GGCC 1 cut(s) 1542
BshNI GGYRCC 2 cut(s) 833, 1235
BsiEI CGRYCG 1 cut(s) 2306
BsiHKAI GWGCWC 2 cut(s) 1185, 1496
BsiHKCI CYCGRG 1 cut(s) 146
BsiSI CCGG 1 cut(s) 147
BslFI GGGAC 2 cut(s) 563, 1994
BslI CCNNNNNNNGG 3 cut(s) 545, 1413, 1990
BsmFI GGGAC 2 cut(s) 563, 1994
BsmI GAATGC 1 cut(s) 2259
BsnI GGCC 1 cut(s) 1542
BsoBI CYCGRG 1 cut(s) 146
Bsp119I TTCGAA 1 cut(s) 126
Bsp1286I GDGCHC 4 cut(s) 367, 1185, 1496, 2274
Bsp1720I GCTNAGC 1 cut(s) 366
Bsp19I CCATGG 2 cut(s) 1249, 1975
BspACI CCGC 3 cut(s) 345, 965, 2115
BspANI GGCC 1 cut(s) 1542
BspCNI CTCAG 6 cut(s) 379, 744, 1482, 1921, 1961, 2374
BspLI GGNNCC 5 cut(s) 566, 835, 1237, 1688, 1982
BspMAI CTGCAG 1 cut(s) 1992
BspMI ACCTGC 1 cut(s) 1069
BspPI GGATC 6 cut(s) 1013, 1732, 1905, 2099, 2154, 2307
BspT104I TTCGAA 1 cut(s) 126
BspT107I GGYRCC 2 cut(s) 833, 1235
BspTI CTTAAG 2 cut(s) 1087, 1418
BsrI ACTGG 4 cut(s) 550, 648, 817, 1908
BssECI CCNNGG 7 cut(s) 145, 146, 538, 890, 1249, 1543, 1975
BssNI GRCGYC 1 cut(s) 834
BssSI CACGAG 3 cut(s) 1008, 1691, 1845
BssT1I CCWWGG 3 cut(s) 1249, 1543, 1975
Bst2BI CACGAG 3 cut(s) 1008, 1691, 1845
Bst2UI CCWGG 5 cut(s) 157, 540, 891, 1742, 2141
Bst4CI ACNGT 9 cut(s) 95, 337, 504, 559, 828, 1044, 1055, 1295, 1561
Bst6I CTCTTC 1 cut(s) 44
BstACI GRCGYC 1 cut(s) 834
BstAFI CTTAAG 2 cut(s) 1087, 1418
BstAPI GCANNNNNTGC 1 cut(s) 1143
BstBI TTCGAA 1 cut(s) 126
BstC8I GCNNGC 4 cut(s) 887, 1076, 1353, 2370
BstDEI CTNAG 8 cut(s) 366, 752, 1490, 1880, 1929, 1948, 2203, 2361
BstDSI CCRYGG 2 cut(s) 1249, 1975
BstF5I GGATG 2 cut(s) 442, 1737
BstH2I RGCGCY 1 cut(s) 837
BstHHI GCGC 3 cut(s) 799, 836, 1137
BstMCI CGRYCG 1 cut(s) 2306
BstMWI GCNNNNNNNGC 5 cut(s) 840, 849, 1143, 1204, 1667
BstNI CCWGG 5 cut(s) 157, 540, 891, 1742, 2141
BstNSI RCATGY 3 cut(s) 86, 1211, 2174
BstSCI CCNGG 7 cut(s) 145, 146, 155, 538, 889, 1740, 2139
BstSFI CTRYAG 4 cut(s) 261, 447, 1509, 1988
BstSLI GKGCMC 1 cut(s) 1185
BstV1I GCAGC 3 cut(s) 1517, 2191, 2377
BstV2I GAAGAC 6 cut(s) 283, 654, 1439, 1468, 2199, 2371
BstX2I RGATCY 3 cut(s) 1018, 1201, 1897
BstYI RGATCY 3 cut(s) 1018, 1201, 1897
Bsu36I CCTNAGG 1 cut(s) 752
BsuI GTATCC 1 cut(s) 492
BsuRI GGCC 1 cut(s) 1542
BtgI CCRYGG 2 cut(s) 1249, 1975
BtgZI GCGATG 1 cut(s) 2269
BtrI CACGTC 1 cut(s) 54
BtsCI GGATG 2 cut(s) 442, 1737
BtsI GCAGTG 3 cut(s) 210, 2052, 2404
BtsIMutI CAGTG 7 cut(s) 210, 509, 555, 641, 833, 2052, 2404
BveI ACCTGC 1 cut(s) 1069
Cac8I GCNNGC 4 cut(s) 887, 1076, 1353, 2370
CfoI GCGC 3 cut(s) 799, 836, 1137
Cfr13I GGNCC 5 cut(s) 76, 337, 1797, 1981, 2408
Cfr9I CCCGGG 1 cut(s) 146
CseI GACGC 1 cut(s) 1516
Csp6I GTAC 7 cut(s) 160, 271, 1056, 1236, 1296, 1557, 2137
CspCI CAANNNNNGTGG 2 cut(s) 699, 734
CviQI GTAC 7 cut(s) 160, 271, 1056, 1236, 1296, 1557, 2137
DdeI CTNAG 8 cut(s) 366, 752, 1490, 1880, 1929, 1948, 2203, 2361
DinI GGCGCC 1 cut(s) 835
DrdI GACNNNNNNGTC 1 cut(s) 83
DseDI GACNNNNNNGTC 1 cut(s) 83
EaeI YGGCCR 1 cut(s) 1540
Eam1104I CTCTTC 1 cut(s) 44
EarI CTCTTC 1 cut(s) 44
Eco130I CCWWGG 3 cut(s) 1249, 1543, 1975
Eco24I GRGCYC 2 cut(s) 367, 2274
Eco47I GGWCC 5 cut(s) 76, 337, 1797, 1981, 2408
Eco57I CTGAAG 5 cut(s) 124, 446, 1149, 1608, 2365
Eco81I CCTNAGG 1 cut(s) 752
Eco88I CYCGRG 1 cut(s) 146
EcoO109I RGGNCCY 1 cut(s) 1797
EcoRI GAATTC 1 cut(s) 1643
EcoRII CCWGG 5 cut(s) 155, 538, 889, 1740, 2139
EcoT14I CCWWGG 3 cut(s) 1249, 1543, 1975
EcoT22I ATGCAT 1 cut(s) 2261
EcoT38I GRGCYC 2 cut(s) 367, 2274
EgeI GGCGCC 1 cut(s) 835
EheI GGCGCC 1 cut(s) 835
ErhI CCWWGG 3 cut(s) 1249, 1543, 1975
FalI AAGNNNNNCTT 5 cut(s) 35, 1317, 1349, 1431, 1463
FaqI GGGAC 2 cut(s) 563, 1994
FauNDI CATATG 1 cut(s) 2020
FbaI TGATCA 3 cut(s) 439, 1116, 1783
FblI GTMKAC 1 cut(s) 323
Fnu4HI GCNGC 3 cut(s) 1506, 2180, 2366
FokI GGATG 2 cut(s) 429, 1744
FriOI GRGCYC 2 cut(s) 367, 2274
Fsp4HI GCNGC 3 cut(s) 1506, 2180, 2366
FspBI CTAG 6 cut(s) 131, 354, 389, 654, 1922, 2457
GlaI GCGC 3 cut(s) 798, 835, 1136
GluI GCNGC 3 cut(s) 1506, 2180, 2366
GsuI CTGGAG 1 cut(s) 139
HaeII RGCGCY 1 cut(s) 837
HaeIII GGCC 1 cut(s) 1542
HapII CCGG 1 cut(s) 147
HgaI GACGC 1 cut(s) 1516
HhaI GCGC 3 cut(s) 799, 836, 1137
Hin1I GRCGYC 1 cut(s) 834
Hin6I GCGC 3 cut(s) 797, 834, 1135
HinP1I GCGC 3 cut(s) 797, 834, 1135
HincII GTYRAC 2 cut(s) 61, 1834
HindII GTYRAC 2 cut(s) 61, 1834
HindIII AAGCTT 1 cut(s) 12
HinfI GANTC 9 cut(s) 252, 377, 619, 731, 1060, 1871, 2216, 2228, 2291
HpaII CCGG 1 cut(s) 147
HphI GGTGA 4 cut(s) 107, 1172, 2025, 2450
Hpy166II GTNNAC 7 cut(s) 61, 324, 956, 1183, 1219, 1834, 2158
Hpy8I GTNNAC 7 cut(s) 61, 324, 956, 1183, 1219, 1834, 2158
HpyAV CCTTC 5 cut(s) 470, 775, 1124, 1788, 2049
HpyCH4III ACNGT 9 cut(s) 95, 337, 504, 559, 828, 1044, 1055, 1295, 1561
HpyCH4IV ACGT 3 cut(s) 53, 580, 1819
HpyF10VI GCNNNNNNNGC 5 cut(s) 840, 849, 1143, 1204, 1667
HpyF3I CTNAG 8 cut(s) 366, 752, 1490, 1880, 1929, 1948, 2203, 2361
HpySE526I ACGT 3 cut(s) 53, 580, 1819
Hsp92I GRCGYC 1 cut(s) 834
HspAI GCGC 3 cut(s) 797, 834, 1135
KasI GGCGCC 1 cut(s) 833
KpnI GGTACC 1 cut(s) 1239
Ksp22I TGATCA 3 cut(s) 439, 1116, 1783
LmnI GCTCC 1 cut(s) 570
Lsp1109I GCAGC 3 cut(s) 1517, 2191, 2377
LweI GCATC 4 cut(s) 489, 1915, 2246, 2354
MaeI CTAG 6 cut(s) 131, 354, 389, 654, 1922, 2457
MaeII ACGT 3 cut(s) 53, 580, 1819
MaeIII GTNAC 9 cut(s) 331, 525, 601, 738, 812, 1061, 1575, 2031, 2438
MfeI CAATTG 1 cut(s) 484
MflI RGATCY 3 cut(s) 1018, 1201, 1897
MhlI GDGCHC 4 cut(s) 367, 1185, 1496, 2274
MlsI TGGCCA 1 cut(s) 1542
MluNI TGGCCA 1 cut(s) 1542
Mly113I GGCGCC 1 cut(s) 834
MlyI GAGTC 4 cut(s) 613, 1069, 1865, 2222
MmeI TCCRAC 2 cut(s) 151, 1993
Mox20I TGGCCA 1 cut(s) 1542
Mph1103I ATGCAT 1 cut(s) 2261
MroXI GAANNNNTTC 3 cut(s) 1096, 2059, 2389
MscI TGGCCA 1 cut(s) 1542
MseI TTAA 8 cut(s) 5, 512, 666, 689, 1014, 1088, 1335, 1419
MslI CAYNNNNRTG 2 cut(s) 1178, 1212
Msp20I TGGCCA 1 cut(s) 1542
MspA1I CMGCKG 2 cut(s) 370, 2182
MspCI CTTAAG 2 cut(s) 1087, 1418
MspI CCGG 1 cut(s) 147
MspR9I CCNGG 7 cut(s) 147, 148, 157, 540, 891, 1742, 2141
MunI CAATTG 1 cut(s) 484
Mva1269I GAATGC 1 cut(s) 2259
MvaI CCWGG 5 cut(s) 157, 540, 891, 1742, 2141
MwoI GCNNNNNNNGC 5 cut(s) 840, 849, 1143, 1204, 1667
NarI GGCGCC 1 cut(s) 834
NciI CCSGG 2 cut(s) 147, 148
NcoI CCATGG 2 cut(s) 1249, 1975
NdeI CATATG 1 cut(s) 2020
NlaIV GGNNCC 5 cut(s) 566, 835, 1237, 1688, 1982
NmeAIII GCCGAG 1 cut(s) 456
NmuCI GTSAC 6 cut(s) 331, 525, 812, 1061, 2031, 2438
NsiI ATGCAT 1 cut(s) 2261
NspI RCATGY 3 cut(s) 86, 1211, 2174
NspV TTCGAA 1 cut(s) 126
PaqCI CACCTGC 1 cut(s) 1069
PciI ACATGT 2 cut(s) 82, 2170
PctI GAATGC 1 cut(s) 2259
PdmI GAANNNNTTC 3 cut(s) 1096, 2059, 2389
PfeI GAWTC 5 cut(s) 252, 377, 731, 2216, 2291
PflFI GACNNNGTC 1 cut(s) 2311
PfoI TCCNGGA 1 cut(s) 1740
PkrI GCNGC 3 cut(s) 1507, 2181, 2367
PleI GAGTC 4 cut(s) 613, 1068, 1865, 2222
PluTI GGCGCC 1 cut(s) 837
PpsI GAGTC 4 cut(s) 613, 1068, 1865, 2222
PpuMI RGGWCCY 1 cut(s) 1797
PscI ACATGT 2 cut(s) 82, 2170
PshBI ATTAAT 1 cut(s) 666
PsiI TTATAA 2 cut(s) 609, 1566
Psp1406I AACGTT 2 cut(s) 580, 1819
Psp5II RGGWCCY 1 cut(s) 1797
Psp6I CCWGG 5 cut(s) 155, 538, 889, 1740, 2139
PspGI CCWGG 5 cut(s) 155, 538, 889, 1740, 2139
PspN4I GGNNCC 5 cut(s) 566, 835, 1237, 1688, 1982
PspPI GGNCC 5 cut(s) 76, 337, 1797, 1981, 2408
PspPPI RGGWCCY 1 cut(s) 1797
PsrI GAACNNNNNNTAC 2 cut(s) 143, 175
PstI CTGCAG 1 cut(s) 1992
PsuI RGATCY 3 cut(s) 1018, 1201, 1897
PsyI GACNNNGTC 1 cut(s) 2311
PvuII CAGCTG 2 cut(s) 370, 2182
RsaI GTAC 7 cut(s) 161, 272, 1057, 1237, 1297, 1558, 2138
RsaNI GTAC 7 cut(s) 160, 271, 1056, 1236, 1296, 1557, 2137
RseI CAYNNNNRTG 2 cut(s) 1178, 1212
SaqAI TTAA 8 cut(s) 5, 512, 666, 689, 1014, 1088, 1335, 1419
SatI GCNGC 3 cut(s) 1506, 2180, 2366
Sau96I GGNCC 5 cut(s) 76, 337, 1797, 1981, 2408
SchI GAGTC 4 cut(s) 613, 1069, 1865, 2222
ScrFI CCNGG 7 cut(s) 147, 148, 157, 540, 891, 1742, 2141
SduI GDGCHC 4 cut(s) 367, 1185, 1496, 2274
SfaNI GCATC 4 cut(s) 489, 1915, 2246, 2354
SfcI CTRYAG 4 cut(s) 261, 447, 1509, 1988
SfoI GGCGCC 1 cut(s) 835
SfuI TTCGAA 1 cut(s) 126
SinI GGWCC 5 cut(s) 76, 337, 1797, 1981, 2408
SmaI CCCGGG 1 cut(s) 148
SmiMI CAYNNNNRTG 2 cut(s) 1178, 1212
SmlI CTYRAG 3 cut(s) 1087, 1418, 1873
SmoI CTYRAG 3 cut(s) 1087, 1418, 1873
SpeI ACTAGT 1 cut(s) 353
SsiI CCGC 3 cut(s) 345, 965, 2115
SspDI GGCGCC 1 cut(s) 833
SspI AATATT 1 cut(s) 596
SspMI CTAG 6 cut(s) 131, 354, 389, 654, 1922, 2457
StyD4I CCNGG 7 cut(s) 145, 146, 155, 538, 889, 1740, 2139
StyI CCWWGG 3 cut(s) 1249, 1543, 1975
TaaI ACNGT 9 cut(s) 95, 337, 504, 559, 828, 1044, 1055, 1295, 1561
TaiI ACGT 3 cut(s) 56, 583, 1822
TaqI TCGA 6 cut(s) 126, 187, 873, 1227, 2302, 2470
TaqII GACCGA 1 cut(s) 2320
TatI WGTACW 1 cut(s) 1295
TfiI GAWTC 5 cut(s) 252, 377, 731, 2216, 2291
Tru1I TTAA 8 cut(s) 5, 512, 666, 689, 1014, 1088, 1335, 1419
Tru9I TTAA 8 cut(s) 5, 512, 666, 689, 1014, 1088, 1335, 1419
TscAI CASTG 7 cut(s) 210, 509, 562, 648, 833, 2052, 2404
TseFI GTSAC 6 cut(s) 331, 525, 812, 1061, 2031, 2438
TseI GCWGC 3 cut(s) 1505, 2179, 2365
Tsp45I GTSAC 6 cut(s) 331, 525, 812, 1061, 2031, 2438
TspDTI ATGAA 9 cut(s) 23, 485, 912, 1046, 1458, 2211, 2259, 2317, 2382
TspGWI ACGGA 7 cut(s) 46, 89, 288, 557, 999, 2143, 2439
TspMI CCCGGG 1 cut(s) 146
TspRI CASTG 7 cut(s) 210, 509, 562, 648, 833, 2052, 2404
Tth111I GACNNNGTC 1 cut(s) 2311
Vha464I CTTAAG 2 cut(s) 1087, 1418
VneI GTGCAC 1 cut(s) 1181
VpaK11BI GGWCC 5 cut(s) 76, 337, 1797, 1981, 2408
VspI ATTAAT 1 cut(s) 666
XapI RAATTY 3 cut(s) 174, 1309, 1643
XbaI TCTAGA 1 cut(s) 1921
XceI RCATGY 3 cut(s) 86, 1211, 2174
XcmI CCANNNNNNNNNTGG 1 cut(s) 1550
XmaI CCCGGG 1 cut(s) 146
XmiI GTMKAC 1 cut(s) 323
XmnI GAANNNNTTC 3 cut(s) 1096, 2059, 2389
XspI CTAG 6 cut(s) 131, 354, 389, 654, 1922, 2457
Zsp2I ATGCAT 1 cut(s) 2261
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.