Rorug02G0293300

serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
OG0000112
Physical Location & Seq
Forward (+)
32365131 .. 32372502
7372 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0293300.1

Sequence Viewer

Length: 1689 bp
ATGGCCGCCTTTGCGCCACCCTCTTCTTCTCTCCGCCTCCGCTTCCTCTCCTTCTACCCCATCAGACCAATTCTCCCCCACTCCAAACCTCCTATTTTCCCGCCATTTCTTCCCCGGCCCTTCCCGCCCTCCGCCCCTCCACGCCGCTCCTTCTGCACCGTCGTCGCCGCAGCTCTCCACTCCGGCGGCGCCGCCGAGAGGACCAAGCCCGAAATCTCGGAAAAGTGGAGGGACAGAGTTGGCGAGTTCAGGAAGAAGCTCAAGGTCGCTGACATCAAGGGCGGCCCTGATGAAGGGCTCGACCGGCTGGGCCAGACTCTGGTGGTCACCGGCTGGGTTCGGACTCTTCGCGTCCAAAGCAGTGTCACCTTCATTGAGGTTAACGATGGGTCATGCCTCTCGAATATGCAATGTGTAATGGGTTCCGACGCGGAAGGCTATGATCAGGTAGAATCTGGCTCAATCACAACTGGTGCATCGGTATGGGTGCAAGGCGTTGTAGCTACTAGCCAAGGATCAAAGCAAAAAGTGGAATTGAAGGTCAAGAAAATTGTTATGATTGGAAAGAGTGATCCTTCTTATCCTATCCAAAAGAAAAGGGTCAGCAGAGAATTTCTGAGAACGAAAGCTCATCTTCGGCCAAGAACAAATACTTTTGGTGCGGTTGCAAGAGTGAGAAATGCTTTGGCTTACGCTACTCACAACTTTTTCCAAGAAAATGGATTTGTGTGGGTCTCAAGTCCCATTATTACTGGTTCAGATTGTGAAGGAGCAGGTGAACAATTCTGTGTAACTACTCTGATTCCAAGCTCCAATGAAGTCTCTGATTCTCCTATCGATGGTATACCAAAAAAGGAGGATGGCCGAGTTGATTGGTCACAAGATTTCTTTGGGAAACCAGCATTCTTAACTGTCTCTGGCCAACTCAATGCTGAAACATATGCAACTGCTCTTTCTGATGTTTATACATTTGGTCCCACATTCAGGGCTGAAAATTCAAACACATCAAGACACCTTGCTGAATTCTGGATGATTGAGCCTGAGCTTGCATTTGCTGATCTGAATGATGACATGGCCTGTGCAACTGCCTATCTCCAGTATGTAGTGAGACATGTCCTCGATAATTGCAAAGAAGACATGGATTTTTTTAATACTTGGATTGAGAAAGGAATCATCAATCGATTGACTGATGTAGCTGAGAAAGACTTTGTGCAGTTGACGTATACTGATGCAGTTGAACTTCTTCTTAAAACAAAGAAGAAATTTGAATTCCCAGTGAAGTGGGGATGTGATTTGCAGAGTGAGCATGAGCGTTATTTAACTGAAGAGGCATTTAGTGGATGCCCAGTAATTGTCAGGGACTATCCGAAGGAGATAAAAGCATTCTATATGCGGCAAAATGATGATGGAAAGACTGTGGCAGCTATGGATATGTTGGTTCCCCGGGTTGGAGAGCTTATCGGTGGAAGCCAGAGAGAAGAGAGGCTTGAATATTTAGAAGATCGGTTGGATGAATTAAAGCTGAATAAGGAGGCATACTGGTGGTATCTTGATTTGCGTCGTTATGGGTCAGTTCCTCATGCGGGCTTTGGTCTTGGTTTCGAAAGGCTTGTACAATTTGCCACTGGGATAGAGAATATCAGAGATGTGATTCCTTTCCCTCGGACACCTGGATCATCAGAATTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
B_lectin DUF3403 PAN_2 Pkinase Pkinase_Tyr S_locus_glycop

Protein Analysis

562

Amino Acids

63.16

Weight (kDa)

6.17

Isoelectric Point (pI)

42.8

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
tRNA-synt_2 PF00152 204 - 556 2.3e-61 tRNA synthetases class II (D, K and N)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000112)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g03320 FvH4_3g03322 FvH4_3g03323 FvH4_3g03340 FvH4_3g03350 FvH4_3g03351 FvH4_3g03370 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g06140 FvH4_6g00257 FvH4_6g00257 FvH4_6g00270 FvH4_6g00300 FvH4_6g20800 FvH4_6g20800 FvH4_6g20800 FvH4_6g20800 FvH4_6g20800
malus_domestica MD05G1232700.v1.1 MD05G1327700.v1.1 MD05G1327800.v1.1 MD05G1327900.v1.1 MD05G1328000.v1.1 MD05G1328200.v1.1 MD05G1328300.v1.1 MD05G1328500.v1.1 MD05G1332000.v1.1 MD05G1332100.v1.1 MD10G1307600.v1.1 MD10G1307800.v1.1
prunus_persica Prupe.4G031900_v2.0.a1 Prupe.4G032000_v2.0.a1 Prupe.4G032000_v2.0.a1 Prupe.4G032100_v2.0.a1 Prupe.4G032200_v2.0.a1 Prupe.4G032200_v2.0.a1 Prupe.4G032200_v2.0.a1
pyrus_communis pycom05g30180 pycom05g30190 pycom05g30200 pycom05g30210 pycom10g25920 pycom10g25930
rosa_chinensis RchiOBHm_Chr2g0130831 RchiOBHm_Chr2g0132531 RchiOBHm_Chr2g0132541 RchiOBHm_Chr3g0455681 RchiOBHm_Chr3g0476681 RchiOBHm_Chr3g0476761 RchiOBHm_Chr3g0476771 RchiOBHm_Chr3g0476791 RchiOBHm_Chr3g0476801 RchiOBHm_Chr3g0476811 RchiOBHm_Chr4g0413551 RchiOBHm_Chr4g0413561 RchiOBHm_Chr5g0002911 RchiOBHm_Chr5g0005071 RchiOBHm_Chr5g0005101 RchiOBHm_Chr5g0005111 RchiOBHm_Chr5g0005121 RchiOBHm_Chr5g0005131 RchiOBHm_Chr5g0005141 RchiOBHm_Chr5g0005161 RchiOBHm_Chr5g0005171 RchiOBHm_Chr5g0006341 RchiOBHm_Chr5g0046161 RchiOBHm_Chr5g0046171 RchiOBHm_Chr5g0046181 RchiOBHm_Chr5g0046221 RchiOBHm_Chr5g0046231 RchiOBHm_Chr7g0224061 RchiOBHm_Chr7g0224081 RchiOBHm_Chr7g0224101 RchiOBHm_Chr7g0224111 RchiOBHm_Chr7g0224121
rosa_laevigata RLG00000010193 RLG00000019146 RLG00000019148 RLG00000019149 RLG00000019150 RLG00000023750 RLG00000023751 RLG00000023753 RLG00000029486 RLG00000031068 RLG00000031069 RLG00000031284 RLG00000031285 RLG00000031286 RLG00000031289 RLG00000031290 RLG00000031291 RLG00000031292 RLG00000031293 RLG00000031294 RLG00000031295 RLG00000031296 RLG00000031297 RLG00000031363 RLG00000032618 RLG00000032619
rosa_multiflora Rmu_co8147584.1_g000001 Rmu_co8205828.1_g000001 Rmu_co8373645.1_g000001 Rmu_co8407679.1_g000001 Rmu_co8452561.1_g000001 Rmu_sc0001035.1_g000076 Rmu_sc0001884.1_g000026 Rmu_sc0001884.1_g000027 Rmu_sc0001884.1_g000035 Rmu_sc0002157.1_g000026 Rmu_sc0002399.1_g000006 Rmu_sc0002399.1_g000007 Rmu_sc0002883.1_g000010 Rmu_sc0003629.1_g000014 Rmu_sc0003884.1_g000004 Rmu_sc0007865.1_g000005 Rmu_sc0008085.1_g000013 Rmu_sc0008085.1_g000014 Rmu_sc0008085.1_g000016 Rmu_sc0008085.1_g000018 Rmu_sc0008432.1_g000004 Rmu_sc0008714.1_g000002 Rmu_sc0009296.1_g000008 Rmu_sc0009296.1_g000009 Rmu_sc0009296.1_g000011 Rmu_sc0010281.1_g000001 Rmu_sc0010281.1_g000002 Rmu_sc0010714.1_g000011 Rmu_sc0010714.1_g000016 Rmu_sc0011169.1_g000001 Rmu_sc0011169.1_g000007 Rmu_sc0013603.1_g000006 Rmu_sc0020478.1_g000003 Rmu_sc0020478.1_g000007 Rmu_sc0025106.1_g000012 Rmu_sc0032709.1_g000001 Rmu_sc0033028.1_g000001
rosa_roxburghii Rroxscaffold_1G00069570 Rroxscaffold_1G00069610 Rroxscaffold_1G00069620 Rroxscaffold_1G00070480 Rroxscaffold_1G00070490 Rroxscaffold_1G00070500 Rroxscaffold_1G00070510 Rroxscaffold_1G00070520 Rroxscaffold_1G00070530 Rroxscaffold_1G00070540 Rroxscaffold_1G00070550 Rroxscaffold_1G00070590 Rroxscaffold_1G00072950 Rroxscaffold_1G00073080 Rroxscaffold_2G00111810 Rroxscaffold_2G00111820 Rroxscaffold_2G00113530 Rroxscaffold_2G00113870 Rroxscaffold_6G00405010 Rroxscaffold_6G00405020 Rroxscaffold_6G00423590 Rroxscaffold_6G00424100
rosa_rugosa Rorug02G0293200 Rorug02G0293300 Rorug02G0293400 Rorug02G0305900 Rorug02G0305900 Rorug03G0009100 Rorug03G0157000 Rorug03G0157000 Rorug03G0304900 Rorug04G0400500 Rorug04G0415200 Rorug04G0415300 Rorug04G0415400 Rorug04G0415500 Rorug04G0421100 Rorug05G0068000 Rorug05G0068100 Rorug05G0068200 Rorug05G0068500 Rorug05G0224600 Rorug05G0224700
rosa_samantha Rh2CG331700 Rh2CG341600 Rh2CG341700 Rh2DG381200 Rh3DG071200 Rh3DG233400 Rh3DG233500 Rh3DG233600 Rh5AG043100 Rh5CG026000 Rh5CG047700 Rh5CG047800 Rh5CG047900 Rh5CG048000 Rh5CG048100 Rh5CG048300 Rh5CG056500 Rh5CG340500 Rh5CG340700 Rh5CG340800 Rh7AG365000
rosa_wichuraiana Rw0G002360 Rw0G002370 Rw0G012520 Rw0G018230 Rw0G019190 Rw2G027480 Rw2G029150 Rw3G005520 Rw3G005880 Rw3G005890 Rw3G018840 Rw3G018850 Rw3G018870 Rw3G018880 Rw3G020740 Rw5G002190 Rw5G004180 Rw5G004190 Rw5G004890 Rw5G013960 Rw5G014000 Rw5G028610 Rw7G030910 Rw7G030920

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 764
Acc36I ACCTGC 1 cut(s) 764
AccB1I GGYRCC 1 cut(s) 188
AccB7I CCANNNNNTGG 1 cut(s) 319
AccBSI CCGCTC 1 cut(s) 147
AccI GTMKAC 2 cut(s) 844, 1223
AccII CGCG 2 cut(s) 351, 431
AclWI GGATC 3 cut(s) 523, 566, 1681
AcoI YGGCCR 4 cut(s) 3, 638, 862, 919
AcsI RAATTY 6 cut(s) 611, 994, 1022, 1262, 1268, 1682
AcuI CTGAAG 1 cut(s) 1344
AcyI GRCGYC 1 cut(s) 189
AfaI GTAC 1 cut(s) 1614
AfiI CCNNNNNNNGG 7 cut(s) 198, 293, 319, 839, 984, 1448, 1583
AflIII ACRYGT 1 cut(s) 1111
AgsI TTSAA 5 cut(s) 538, 999, 1238, 1268, 1490
AjnI CCWGG 1 cut(s) 1669
Alw26I GTCTC 4 cut(s) 739, 826, 919, 1102
AlwI GGATC 3 cut(s) 523, 566, 1681
AlwNI CAGNNNCTG 1 cut(s) 319
Ama87I CYCGRG 1 cut(s) 1443
AoxI GGCC 8 cut(s) 3, 116, 283, 310, 638, 862, 919, 1074
ApeKI GCWGC 2 cut(s) 170, 1421
ApoI RAATTY 6 cut(s) 611, 994, 1022, 1262, 1268, 1682
Asp700I GAANNNNTTC 1 cut(s) 1242
AspLEI GCGC 2 cut(s) 16, 191
AspS9I GGNCC 5 cut(s) 117, 201, 284, 310, 974
AsuC2I CCSGG 3 cut(s) 115, 1444, 1445
AsuHPI GGTGA 3 cut(s) 319, 358, 788
AsuII TTCGAA 1 cut(s) 1602
AvaI CYCGRG 1 cut(s) 1443
AvaII GGWCC 2 cut(s) 201, 974
BalI TGGCCA 1 cut(s) 921
BanI GGYRCC 1 cut(s) 188
BanII GRGCYC 1 cut(s) 300
BbsI GAAGAC 1 cut(s) 1140
BbvI GCAGC 2 cut(s) 182, 1433
BccI CCATC 5 cut(s) 68, 380, 833, 854, 1400
BcgI CGANNNNNNTGC 2 cut(s) 145, 179
BciT130I CCWGG 1 cut(s) 1671
BclI TGATCA 1 cut(s) 442
BcnI CCSGG 3 cut(s) 115, 1444, 1445
BcoDI GTCTC 4 cut(s) 739, 826, 919, 1102
BfaI CTAG 1 cut(s) 507
BfoI RGCGCY 1 cut(s) 192
BfuAI ACCTGC 1 cut(s) 764
BisI GCNGC 9 cut(s) 6, 145, 168, 171, 187, 192, 283, 1394, 1422
BlsI GCNGC 9 cut(s) 7, 146, 169, 172, 188, 193, 284, 1395, 1423
Bme1390I CCNGG 4 cut(s) 115, 1444, 1445, 1671
Bme18I GGWCC 2 cut(s) 201, 974
BmeT110I CYCGRG 1 cut(s) 1443
BmgT120I GGNCC 5 cut(s) 117, 201, 284, 310, 974
BmiI GGNNCC 4 cut(s) 190, 424, 976, 1440
BmrFI CCNGG 4 cut(s) 115, 1444, 1445, 1671
BmrI ACTGGG 3 cut(s) 1268, 1340, 1635
BmsI GCATC 3 cut(s) 485, 1219, 1331
BmuI ACTGGG 3 cut(s) 1268, 1340, 1635
BpiI GAAGAC 1 cut(s) 1140
BpmI CTGGAG 1 cut(s) 1079
Bpu10I CCTNAGC 1 cut(s) 1041
Bpu14I TTCGAA 1 cut(s) 1602
BpuEI CTTGAG 2 cut(s) 245, 721
BpuMI CCSGG 3 cut(s) 115, 1444, 1445
Bsa29I ATCGAT 2 cut(s) 837, 1180
BsaHI GRCGYC 1 cut(s) 189
BsaI GGTCTC 1 cut(s) 739
BsaJI CCNNGG 5 cut(s) 113, 511, 1442, 1443, 1661
BsaXI ACNNNNNCTCC 2 cut(s) 57, 87
Bsc4I CCNNNNNNNGG 7 cut(s) 198, 293, 319, 839, 984, 1448, 1583
Bse118I RCCGGY 2 cut(s) 303, 329
Bse1I ACTGG 7 cut(s) 475, 757, 1096, 1274, 1346, 1544, 1630
Bse3DI GCAATG 1 cut(s) 416
BseBI CCWGG 1 cut(s) 1671
BseCI ATCGAT 2 cut(s) 837, 1180
BseDI CCNNGG 5 cut(s) 113, 511, 1442, 1443, 1661
BseGI GGATG 5 cut(s) 865, 1035, 1292, 1346, 1516
BseLI CCNNNNNNNGG 7 cut(s) 198, 293, 319, 839, 984, 1448, 1583
BseMI GCAATG 1 cut(s) 416
BseMII CTCAG 3 cut(s) 608, 1032, 1188
BseNI ACTGG 7 cut(s) 475, 757, 1096, 1274, 1346, 1544, 1630
BseXI GCAGC 2 cut(s) 182, 1433
BseYI CCCAGC 2 cut(s) 307, 333
BsgI GTGCAG 2 cut(s) 139, 1232
Bsh1236I CGCG 2 cut(s) 351, 431
Bsh1285I CGRYCG 1 cut(s) 304
BshFI GGCC 8 cut(s) 5, 118, 285, 312, 640, 864, 921, 1076
BshNI GGYRCC 1 cut(s) 188
BshVI ATCGAT 2 cut(s) 837, 1180
BsiEI CGRYCG 1 cut(s) 304
BsiHKCI CYCGRG 1 cut(s) 1443
BsiSI CCGG 5 cut(s) 115, 183, 304, 330, 1444
BslFI GGGAC 4 cut(s) 245, 726, 960, 1373
BslI CCNNNNNNNGG 7 cut(s) 198, 293, 319, 839, 984, 1448, 1583
BsmAI GTCTC 4 cut(s) 739, 826, 919, 1102
BsmFI GGGAC 4 cut(s) 245, 726, 960, 1373
BsmI GAATGC 2 cut(s) 902, 1382
BsnI GGCC 8 cut(s) 5, 118, 285, 312, 640, 864, 921, 1076
Bso31I GGTCTC 1 cut(s) 739
BsoBI CYCGRG 1 cut(s) 1443
Bsp119I TTCGAA 1 cut(s) 1602
Bsp1286I GDGCHC 1 cut(s) 300
Bsp1407I TGTACA 1 cut(s) 1612
Bsp143I GATC 6 cut(s) 442, 515, 571, 1057, 1501, 1673
BspANI GGCC 8 cut(s) 5, 118, 285, 312, 640, 864, 921, 1076
BspCNI CTCAG 3 cut(s) 609, 1033, 1189
BspDI ATCGAT 2 cut(s) 837, 1180
BspFNI CGCG 2 cut(s) 351, 431
BspLI GGNNCC 4 cut(s) 190, 424, 976, 1440
BspMI ACCTGC 1 cut(s) 764
BspPI GGATC 3 cut(s) 523, 566, 1681
BspT104I TTCGAA 1 cut(s) 1602
BspT107I GGYRCC 1 cut(s) 188
BspTNI GGTCTC 1 cut(s) 739
BsrBI CCGCTC 1 cut(s) 147
BsrDI GCAATG 1 cut(s) 416
BsrFI RCCGGY 2 cut(s) 303, 329
BsrGI TGTACA 1 cut(s) 1612
BsrI ACTGG 7 cut(s) 475, 757, 1096, 1274, 1346, 1544, 1630
BssAI RCCGGY 2 cut(s) 303, 329
BssECI CCNNGG 5 cut(s) 113, 511, 1442, 1443, 1661
BssMI GATC 6 cut(s) 442, 515, 571, 1057, 1501, 1673
BssNAI GTATAC 2 cut(s) 845, 1224
BssNI GRCGYC 1 cut(s) 189
BssT1I CCWWGG 1 cut(s) 511
Bst1107I GTATAC 2 cut(s) 845, 1224
Bst2UI CCWGG 1 cut(s) 1671
Bst4CI ACNGT 3 cut(s) 160, 913, 1417
Bst6I CTCTTC 4 cut(s) 28, 351, 1320, 1473
BstACI GRCGYC 1 cut(s) 189
BstAUI TGTACA 1 cut(s) 1612
BstBI TTCGAA 1 cut(s) 1602
BstC8I GCNNGC 2 cut(s) 1047, 1585
BstDEI CTNAG 3 cut(s) 617, 1041, 1197
BstEII GGTNACC 1 cut(s) 325
BstENI CCTNNNNNAGG 1 cut(s) 291
BstF5I GGATG 5 cut(s) 865, 1035, 1292, 1346, 1516
BstFNI CGCG 2 cut(s) 351, 431
BstH2I RGCGCY 1 cut(s) 192
BstHHI GCGC 2 cut(s) 16, 191
BstKTI GATC 6 cut(s) 445, 518, 574, 1060, 1504, 1676
BstMAI GTCTC 4 cut(s) 739, 826, 919, 1102
BstMBI GATC 6 cut(s) 442, 515, 571, 1057, 1501, 1673
BstMCI CGRYCG 1 cut(s) 304
BstMWI GCNNNNNNNGC 6 cut(s) 11, 124, 153, 304, 357, 1303
BstNI CCWGG 1 cut(s) 1671
BstNSI RCATGY 1 cut(s) 1115
BstPI GGTNACC 1 cut(s) 325
BstSCI CCNGG 4 cut(s) 113, 1442, 1443, 1669
BstUI CGCG 2 cut(s) 351, 431
BstV1I GCAGC 2 cut(s) 182, 1433
BstV2I GAAGAC 1 cut(s) 1140
BstXI CCANNNNNNTGG 2 cut(s) 719, 1281
BstZ17I GTATAC 2 cut(s) 845, 1224
Bsu15I ATCGAT 2 cut(s) 837, 1180
BsuRI GGCC 8 cut(s) 5, 118, 285, 312, 640, 864, 921, 1076
BsuTUI ATCGAT 2 cut(s) 837, 1180
BtsCI GGATG 5 cut(s) 865, 1035, 1292, 1346, 1516
BtsI GCAGTG 1 cut(s) 367
BtsIMutI CAGTG 3 cut(s) 367, 1281, 1623
BveI ACCTGC 1 cut(s) 764
Cac8I GCNNGC 2 cut(s) 1047, 1585
CaiI CAGNNNCTG 1 cut(s) 319
CfoI GCGC 2 cut(s) 16, 191
Cfr10I RCCGGY 2 cut(s) 303, 329
Cfr13I GGNCC 5 cut(s) 117, 201, 284, 310, 974
Cfr9I CCCGGG 1 cut(s) 1443
ClaI ATCGAT 2 cut(s) 837, 1180
CseI GACGC 3 cut(s) 340, 437, 1547
Csp6I GTAC 1 cut(s) 1613
CviAII CATG 6 cut(s) 393, 1072, 1112, 1138, 1307, 1580
CviQI GTAC 1 cut(s) 1613
DdeI CTNAG 3 cut(s) 617, 1041, 1197
DinI GGCGCC 1 cut(s) 190
DpnI GATC 6 cut(s) 444, 517, 573, 1059, 1503, 1675
DpnII GATC 6 cut(s) 442, 515, 571, 1057, 1501, 1673
EaeI YGGCCR 4 cut(s) 3, 638, 862, 919
Eam1104I CTCTTC 4 cut(s) 28, 351, 1320, 1473
EarI CTCTTC 4 cut(s) 28, 351, 1320, 1473
EciI GGCGGA 2 cut(s) 23, 121
Eco130I CCWWGG 1 cut(s) 511
Eco24I GRGCYC 1 cut(s) 300
Eco31I GGTCTC 1 cut(s) 739
Eco47I GGWCC 2 cut(s) 201, 974
Eco57I CTGAAG 1 cut(s) 1344
Eco88I CYCGRG 1 cut(s) 1443
Eco91I GGTNACC 1 cut(s) 325
EcoNI CCTNNNNNAGG 1 cut(s) 291
EcoO65I GGTNACC 1 cut(s) 325
EcoRI GAATTC 2 cut(s) 1022, 1268
EcoRII CCWGG 1 cut(s) 1669
EcoT14I CCWWGG 1 cut(s) 511
EcoT38I GRGCYC 1 cut(s) 300
EgeI GGCGCC 1 cut(s) 190
EheI GGCGCC 1 cut(s) 190
ErhI CCWWGG 1 cut(s) 511
FaeI CATG 6 cut(s) 396, 1075, 1115, 1141, 1310, 1583
FalI AAGNNNNNCTT 4 cut(s) 618, 650, 1470, 1502
FaqI GGGAC 4 cut(s) 245, 726, 960, 1373
FatI CATG 6 cut(s) 392, 1071, 1111, 1137, 1306, 1579
FauI CCCGC 3 cut(s) 108, 132, 1576
FauNDI CATATG 1 cut(s) 940
FbaI TGATCA 1 cut(s) 442
FblI GTMKAC 2 cut(s) 844, 1223
Fnu4HI GCNGC 9 cut(s) 6, 145, 168, 171, 187, 192, 283, 1394, 1422
FokI GGATG 5 cut(s) 872, 1042, 1299, 1353, 1523
FriOI GRGCYC 1 cut(s) 300
Fsp4HI GCNGC 9 cut(s) 6, 145, 168, 171, 187, 192, 283, 1394, 1422
FspBI CTAG 1 cut(s) 507
GlaI GCGC 2 cut(s) 15, 190
GluI GCNGC 9 cut(s) 6, 145, 168, 171, 187, 192, 283, 1394, 1422
GsaI CCCAGC 2 cut(s) 311, 337
GsuI CTGGAG 1 cut(s) 1079
HaeII RGCGCY 1 cut(s) 192
HaeIII GGCC 8 cut(s) 5, 118, 285, 312, 640, 864, 921, 1076
HapII CCGG 5 cut(s) 115, 183, 304, 330, 1444
HgaI GACGC 3 cut(s) 340, 437, 1547
HhaI GCGC 2 cut(s) 16, 191
Hin1I GRCGYC 1 cut(s) 189
Hin1II CATG 6 cut(s) 396, 1075, 1115, 1141, 1310, 1583
Hin6I GCGC 2 cut(s) 14, 189
HinP1I GCGC 2 cut(s) 14, 189
HincII GTYRAC 2 cut(s) 382, 1218
HindII GTYRAC 2 cut(s) 382, 1218
HinfI GANTC 7 cut(s) 316, 343, 452, 802, 827, 1170, 1651
HpaI GTTAAC 1 cut(s) 382
HpaII CCGG 5 cut(s) 115, 183, 304, 330, 1444
HphI GGTGA 3 cut(s) 319, 358, 788
Hpy166II GTNNAC 5 cut(s) 382, 779, 845, 1218, 1224
Hpy188III TCNNGA 6 cut(s) 250, 400, 544, 1008, 1027, 1550
Hpy8I GTNNAC 5 cut(s) 382, 779, 845, 1218, 1224
Hpy99I CGWCG 4 cut(s) 164, 167, 431, 1563
HpyCH4III ACNGT 3 cut(s) 160, 913, 1417
HpyCH4IV ACGT 1 cut(s) 1220
HpyF10VI GCNNNNNNNGC 6 cut(s) 11, 124, 153, 304, 357, 1303
HpyF3I CTNAG 3 cut(s) 617, 1041, 1197
HpySE526I ACGT 1 cut(s) 1220
Hsp92I GRCGYC 1 cut(s) 189
Hsp92II CATG 6 cut(s) 396, 1075, 1115, 1141, 1310, 1583
HspAI GCGC 2 cut(s) 14, 189
KasI GGCGCC 1 cut(s) 188
Ksp22I TGATCA 1 cut(s) 442
KspAI GTTAAC 1 cut(s) 382
Kzo9I GATC 6 cut(s) 442, 515, 571, 1057, 1501, 1673
LmnI GCTCC 3 cut(s) 152, 770, 815
Lsp1109I GCAGC 2 cut(s) 182, 1433
LweI GCATC 3 cut(s) 485, 1219, 1331
MaeI CTAG 1 cut(s) 507
MaeII ACGT 1 cut(s) 1220
MaeIII GTNAC 4 cut(s) 325, 364, 790, 876
MalI GATC 6 cut(s) 444, 517, 573, 1059, 1503, 1675
MbiI CCGCTC 1 cut(s) 147
MboI GATC 6 cut(s) 442, 515, 571, 1057, 1501, 1673
MhlI GDGCHC 1 cut(s) 300
MlsI TGGCCA 1 cut(s) 921
MluNI TGGCCA 1 cut(s) 921
Mly113I GGCGCC 1 cut(s) 189
MlyI GAGTC 2 cut(s) 310, 337
MmeI TCCRAC 3 cut(s) 450, 1429, 1488
Mox20I TGGCCA 1 cut(s) 921
MroXI GAANNNNTTC 1 cut(s) 1242
MscI TGGCCA 1 cut(s) 921
MseI TTAA 7 cut(s) 381, 908, 1149, 1248, 1319, 1517, 1687
MslI CAYNNNNRTG 2 cut(s) 481, 1540
Msp20I TGGCCA 1 cut(s) 921
MspI CCGG 5 cut(s) 115, 183, 304, 330, 1444
MspR9I CCNGG 4 cut(s) 115, 1444, 1445, 1671
Mva1269I GAATGC 2 cut(s) 902, 1382
MvaI CCWGG 1 cut(s) 1671
MvnI CGCG 2 cut(s) 351, 431
MwoI GCNNNNNNNGC 6 cut(s) 11, 124, 153, 304, 357, 1303
NarI GGCGCC 1 cut(s) 189
NciI CCSGG 3 cut(s) 115, 1444, 1445
NdeI CATATG 1 cut(s) 940
NdeII GATC 6 cut(s) 442, 515, 571, 1057, 1501, 1673
NlaIII CATG 6 cut(s) 396, 1075, 1115, 1141, 1310, 1583
NlaIV GGNNCC 4 cut(s) 190, 424, 976, 1440
NmeAIII GCCGAG 2 cut(s) 220, 890
NmuCI GTSAC 3 cut(s) 325, 364, 876
NspI RCATGY 1 cut(s) 1115
NspV TTCGAA 1 cut(s) 1602
PaqCI CACCTGC 1 cut(s) 764
PciI ACATGT 1 cut(s) 1111
PctI GAATGC 2 cut(s) 902, 1382
PdmI GAANNNNTTC 1 cut(s) 1242
PfeI GAWTC 5 cut(s) 452, 802, 827, 1170, 1651
PflMI CCANNNNNTGG 1 cut(s) 319
PkrI GCNGC 9 cut(s) 7, 146, 169, 172, 188, 193, 284, 1395, 1423
PleI GAGTC 2 cut(s) 310, 337
PluTI GGCGCC 1 cut(s) 192
PpsI GAGTC 2 cut(s) 310, 337
PscI ACATGT 1 cut(s) 1111
Psp6I CCWGG 1 cut(s) 1669
PspEI GGTNACC 1 cut(s) 325
PspFI CCCAGC 2 cut(s) 307, 333
PspGI CCWGG 1 cut(s) 1669
PspN4I GGNNCC 4 cut(s) 190, 424, 976, 1440
PspPI GGNCC 5 cut(s) 117, 201, 284, 310, 974
PstNI CAGNNNCTG 1 cut(s) 319
RsaI GTAC 1 cut(s) 1614
RsaNI GTAC 1 cut(s) 1613
RseI CAYNNNNRTG 2 cut(s) 481, 1540
SaqAI TTAA 7 cut(s) 381, 908, 1149, 1248, 1319, 1517, 1687
SatI GCNGC 9 cut(s) 6, 145, 168, 171, 187, 192, 283, 1394, 1422
Sau3AI GATC 6 cut(s) 442, 515, 571, 1057, 1501, 1673
Sau96I GGNCC 5 cut(s) 117, 201, 284, 310, 974
SchI GAGTC 2 cut(s) 310, 337
ScrFI CCNGG 4 cut(s) 115, 1444, 1445, 1671
SduI GDGCHC 1 cut(s) 300
SfaNI GCATC 3 cut(s) 485, 1219, 1331
SfoI GGCGCC 1 cut(s) 190
SfuI TTCGAA 1 cut(s) 1602
SinI GGWCC 2 cut(s) 201, 974
SmaI CCCGGG 1 cut(s) 1445
SmiMI CAYNNNNRTG 2 cut(s) 481, 1540
SmlI CTYRAG 2 cut(s) 260, 736
SmoI CTYRAG 2 cut(s) 260, 736
SspDI GGCGCC 1 cut(s) 188
SspI AATATT 1 cut(s) 1493
SspMI CTAG 1 cut(s) 507
StyD4I CCNGG 4 cut(s) 113, 1442, 1443, 1669
StyI CCWWGG 1 cut(s) 511
TaaI ACNGT 3 cut(s) 160, 913, 1417
TaiI ACGT 1 cut(s) 1223
TaqI TCGA 6 cut(s) 300, 401, 837, 1119, 1180, 1602
TatI WGTACW 1 cut(s) 1612
TauI GCSGC 7 cut(s) 8, 147, 170, 189, 194, 285, 1396
TfiI GAWTC 5 cut(s) 452, 802, 827, 1170, 1651
Tru1I TTAA 7 cut(s) 381, 908, 1149, 1248, 1319, 1517, 1687
Tru9I TTAA 7 cut(s) 381, 908, 1149, 1248, 1319, 1517, 1687
TscAI CASTG 3 cut(s) 367, 1281, 1630
TseFI GTSAC 3 cut(s) 325, 364, 876
TseI GCWGC 2 cut(s) 170, 1421
Tsp45I GTSAC 3 cut(s) 325, 364, 876
TspDTI ATGAA 4 cut(s) 306, 361, 831, 1527
TspMI CCCGGG 1 cut(s) 1443
TspRI CASTG 3 cut(s) 367, 1281, 1630
Van91I CCANNNNNTGG 1 cut(s) 319
VpaK11BI GGWCC 2 cut(s) 201, 974
XagI CCTNNNNNAGG 1 cut(s) 291
XapI RAATTY 6 cut(s) 611, 994, 1022, 1262, 1268, 1682
XceI RCATGY 1 cut(s) 1115
XmaI CCCGGG 1 cut(s) 1443
XmiI GTMKAC 2 cut(s) 844, 1223
XmnI GAANNNNTTC 1 cut(s) 1242
XspI CTAG 1 cut(s) 507
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.