Rh2CG341700

serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2C
OG0000112
Physical Location & Seq
Forward (+)
45857394 .. 45860997
3604 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2CG341700.1

Sequence Viewer

Length: 2130 bp
ATGACCCTATTTGGAAAAGTTCAAAGTAGAAGAATTGCCCAGAAGATCAACATAATGCGACTCATCTCATTTATCACCAGCTCAAGTATGAAAGTGAGAAAAAAGATGCCATTGGTTCATTCCTACAGAATTGAAAATGCCGAGAAAATGGTTTTGAAAGCTCTGCTTCTCTTCCTCCTCTTTCAATTATGCACTTCCAGGGACACCATGAGAGGGAACGAAGAACAATTGAAGGATGTTGATGGTGACTATTTAGTGTCCAAAGAAAGCAAGTTTGAATTGGGTTTCTTCAGCCCCGGAAATTCTAGCAACCGGTATGTTGGAGTCTGGTATTCTCAGACTAGAGTATCTAATAAAACAGTGGTGTGGGTTGCAAACAGGAACAATCCTATCAATGATACCTCTGGTGTGCTCACAATAAACAGGTATGGAGAACTAGTCCTTTATGCTCATAACATGGAAAGCACTCCTATTTGGTCTACTAACGTGTCGCGGTCGGTTCAAAATGTTAACACAAGCACTTTATCTACACAGCTTTTAGATACAGGAAATGTAGTTGTGTTCCAGGATGGTAAAAATGAAATCTTTATATGGCAAAGTTTTGATCATCCTATAGATACTTTAATTCCAAGTATGAAAGTTGGGGCGAATTGGAAAACTGGGCAGGAATGGTTTTTAACATCTTGGAAGTCACAAGATGACCCTGGAACTGGGGACTATACCTATAGGCTAAGTTCAGATCATAATGCATCTCCCCAATTTTTTTTGTATAAAGGTTTGAGTAAGTATTGGCGAAGTGATCCAGGGCCAGCGCCTACTTTGGTCGCTAATCAAAATGAAACTTATTATTTCATGACTGAAACCAATGCAATTACAAGAATAACAGTGACTGATTCTGCCTTAGAGCACCTTATATGGGATAGTGGTGGCTTTCAATGGAAGGAAGACTTCTCTGCTCCGAAGTCCCGGTGTGACAGGTACGGACAGTGTGGTGCCAACAGCAGATGTAGCCCTGACAATGTTAATCTGTTTGAGTGTGACTGTTTGCCAGGGTATGTGCCTAATTCTGTAAGTGATTGGAATCAGAAAAATGGTTCAGGTGGATGTGTGAGTAATCGACTTGGTTTGTTGAAGTGTGGAGATGGCGACGGGTTTATAAAGGTGGCAAGAGTTAAATATCCAGACACATCGATAGCAGCGTCGTTAAAATCAGGTATGAGTGACAAAGAATGTGCACAGGAGTGCCTAAGAAATTGTTCTTGCACTGCATACTTGAGCACTAAAAATGAAGGGATTGTTGATTGCTTGACATGGTATGATGACTTGATGGATATTTTAGTGTACACAGAGCTTGGACGAGATCTCTATGTTCGTGTGAATGCAACTGTGTTAGCGGCAAATGCTGGAAGATCACAAGGTTTCTTGGAAAGGAGGGGTATGCTGGCTATTCCAATACTGTCTACTGCGCTAGCATTGGTACTAATCATTATGCTTGCATGGAAGTGGCGTAAGAAGAACAGGAACACAAGAGGCATAGACTTTGTGGAGGCAGAGGAGCTTGAGGAAACTCAGAGACACCCCGAATTGCAATTTTTCGATCTTGACACAATAATAGCAGCCACAGACCACTTCTCTAGTGTCAATGAACTTGGCCGCGGTGGCTTTGGCTCTGTTTATAAGGGTCAGCTATCAAATGAACAGAAAGTTGCTGTGAAAAGATTGTCCAAAACTTCAGGACAAGGGATTGAAGAATTTAAGAATGAAGTTGCACTTATAGCAAGACTTCAACACAGGAACCTTGTGAAACTTTTAGGCTGTTGTATAAAGGGAGAAGAAAGGATGTTAGTCCTAGAATACATGCCTAACAAAGGCTTGGACTCCTTTCTTTTTGATAAGACAAGACGATCCTTCTTGGATTGGGAAAAGCGTTTTGAAATTATCAACGGAATTGCTCGTGGGATTCTGTATCTTCACCAAGACTCAAGATTGAGGATTATTCATAGAGATCTAAAAACTAGTAATGTTCTACTAGATGATGAGATGAACCCAAAAATTTCTGATTTTGGCATGGCTAGAATATTCCATGGAGACCAACTGCAAGATAAGACGAGCCGAATTGTTGGAACATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
B_lectin DUF3403 PAN_2 Pkinase Pkinase_Tyr S_locus_glycop

Protein Analysis

709

Amino Acids

80.3

Weight (kDa)

8.34

Isoelectric Point (pI)

35.72

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 120 - 230 2.5e-33 D-mannose binding lectin
S_locus_glycop PF00954 278 - 355 7.6e-13 S-locus glycoprotein domain
PAN_2 PF08276 379 - 445 4e-17 PAN-like domain
Pkinase PF00069 545 - 703 3e-33 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 547 - 700 1.3e-35 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000112)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g03320 FvH4_3g03322 FvH4_3g03323 FvH4_3g03340 FvH4_3g03350 FvH4_3g03351 FvH4_3g03370 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g06140 FvH4_6g00257 FvH4_6g00257 FvH4_6g00270 FvH4_6g00300 FvH4_6g20800 FvH4_6g20800 FvH4_6g20800 FvH4_6g20800 FvH4_6g20800
malus_domestica MD05G1232700.v1.1 MD05G1327700.v1.1 MD05G1327800.v1.1 MD05G1327900.v1.1 MD05G1328000.v1.1 MD05G1328200.v1.1 MD05G1328300.v1.1 MD05G1328500.v1.1 MD05G1332000.v1.1 MD05G1332100.v1.1 MD10G1307600.v1.1 MD10G1307800.v1.1
prunus_persica Prupe.4G031900_v2.0.a1 Prupe.4G032000_v2.0.a1 Prupe.4G032000_v2.0.a1 Prupe.4G032100_v2.0.a1 Prupe.4G032200_v2.0.a1 Prupe.4G032200_v2.0.a1 Prupe.4G032200_v2.0.a1
pyrus_communis pycom05g30180 pycom05g30190 pycom05g30200 pycom05g30210 pycom10g25920 pycom10g25930
rosa_chinensis RchiOBHm_Chr2g0130831 RchiOBHm_Chr2g0132531 RchiOBHm_Chr2g0132541 RchiOBHm_Chr3g0455681 RchiOBHm_Chr3g0476681 RchiOBHm_Chr3g0476761 RchiOBHm_Chr3g0476771 RchiOBHm_Chr3g0476791 RchiOBHm_Chr3g0476801 RchiOBHm_Chr3g0476811 RchiOBHm_Chr4g0413551 RchiOBHm_Chr4g0413561 RchiOBHm_Chr5g0002911 RchiOBHm_Chr5g0005071 RchiOBHm_Chr5g0005101 RchiOBHm_Chr5g0005111 RchiOBHm_Chr5g0005121 RchiOBHm_Chr5g0005131 RchiOBHm_Chr5g0005141 RchiOBHm_Chr5g0005161 RchiOBHm_Chr5g0005171 RchiOBHm_Chr5g0006341 RchiOBHm_Chr5g0046161 RchiOBHm_Chr5g0046171 RchiOBHm_Chr5g0046181 RchiOBHm_Chr5g0046221 RchiOBHm_Chr5g0046231 RchiOBHm_Chr7g0224061 RchiOBHm_Chr7g0224081 RchiOBHm_Chr7g0224101 RchiOBHm_Chr7g0224111 RchiOBHm_Chr7g0224121
rosa_laevigata RLG00000010193 RLG00000019146 RLG00000019148 RLG00000019149 RLG00000019150 RLG00000023750 RLG00000023751 RLG00000023753 RLG00000029486 RLG00000031068 RLG00000031069 RLG00000031284 RLG00000031285 RLG00000031286 RLG00000031289 RLG00000031290 RLG00000031291 RLG00000031292 RLG00000031293 RLG00000031294 RLG00000031295 RLG00000031296 RLG00000031297 RLG00000031363 RLG00000032618 RLG00000032619
rosa_multiflora Rmu_co8147584.1_g000001 Rmu_co8205828.1_g000001 Rmu_co8373645.1_g000001 Rmu_co8407679.1_g000001 Rmu_co8452561.1_g000001 Rmu_sc0001035.1_g000076 Rmu_sc0001884.1_g000026 Rmu_sc0001884.1_g000027 Rmu_sc0001884.1_g000035 Rmu_sc0002157.1_g000026 Rmu_sc0002399.1_g000006 Rmu_sc0002399.1_g000007 Rmu_sc0002883.1_g000010 Rmu_sc0003629.1_g000014 Rmu_sc0003884.1_g000004 Rmu_sc0007865.1_g000005 Rmu_sc0008085.1_g000013 Rmu_sc0008085.1_g000014 Rmu_sc0008085.1_g000016 Rmu_sc0008085.1_g000018 Rmu_sc0008432.1_g000004 Rmu_sc0008714.1_g000002 Rmu_sc0009296.1_g000008 Rmu_sc0009296.1_g000009 Rmu_sc0009296.1_g000011 Rmu_sc0010281.1_g000001 Rmu_sc0010281.1_g000002 Rmu_sc0010714.1_g000011 Rmu_sc0010714.1_g000016 Rmu_sc0011169.1_g000001 Rmu_sc0011169.1_g000007 Rmu_sc0013603.1_g000006 Rmu_sc0020478.1_g000003 Rmu_sc0020478.1_g000007 Rmu_sc0025106.1_g000012 Rmu_sc0032709.1_g000001 Rmu_sc0033028.1_g000001
rosa_roxburghii Rroxscaffold_1G00069570 Rroxscaffold_1G00069610 Rroxscaffold_1G00069620 Rroxscaffold_1G00070480 Rroxscaffold_1G00070490 Rroxscaffold_1G00070500 Rroxscaffold_1G00070510 Rroxscaffold_1G00070520 Rroxscaffold_1G00070530 Rroxscaffold_1G00070540 Rroxscaffold_1G00070550 Rroxscaffold_1G00070590 Rroxscaffold_1G00072950 Rroxscaffold_1G00073080 Rroxscaffold_2G00111810 Rroxscaffold_2G00111820 Rroxscaffold_2G00113530 Rroxscaffold_2G00113870 Rroxscaffold_6G00405010 Rroxscaffold_6G00405020 Rroxscaffold_6G00423590 Rroxscaffold_6G00424100
rosa_rugosa Rorug02G0293200 Rorug02G0293300 Rorug02G0293400 Rorug02G0305900 Rorug02G0305900 Rorug03G0009100 Rorug03G0157000 Rorug03G0157000 Rorug03G0304900 Rorug04G0400500 Rorug04G0415200 Rorug04G0415300 Rorug04G0415400 Rorug04G0415500 Rorug04G0421100 Rorug05G0068000 Rorug05G0068100 Rorug05G0068200 Rorug05G0068500 Rorug05G0224600 Rorug05G0224700
rosa_samantha Rh2CG331700 Rh2CG341600 Rh2CG341700 Rh2DG381200 Rh3DG071200 Rh3DG233400 Rh3DG233500 Rh3DG233600 Rh5AG043100 Rh5CG026000 Rh5CG047700 Rh5CG047800 Rh5CG047900 Rh5CG048000 Rh5CG048100 Rh5CG048300 Rh5CG056500 Rh5CG340500 Rh5CG340700 Rh5CG340800 Rh7AG365000
rosa_wichuraiana Rw0G002360 Rw0G002370 Rw0G012520 Rw0G018230 Rw0G019190 Rw2G027480 Rw2G029150 Rw3G005520 Rw3G005880 Rw3G005890 Rw3G018840 Rw3G018850 Rw3G018870 Rw3G018880 Rw3G020740 Rw5G002190 Rw5G004180 Rw5G004190 Rw5G004890 Rw5G013960 Rw5G014000 Rw5G028610 Rw7G030910 Rw7G030920

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1157, 1677
AccB1I GGYRCC 1 cut(s) 992
AccI GTMKAC 2 cut(s) 479, 1460
AccII CGCG 2 cut(s) 493, 1656
AciI CCGC 4 cut(s) 493, 1394, 1654, 1656
AclWI GGATC 2 cut(s) 794, 1899
AcoI YGGCCR 1 cut(s) 1651
AcsI RAATTY 3 cut(s) 301, 1751, 2052
AcuI CTGAAG 2 cut(s) 274, 1716
AfaI GTAC 3 cut(s) 980, 1343, 1479
AfiI CCNNNNNNNGG 4 cut(s) 213, 710, 916, 1868
AflIII ACRYGT 1 cut(s) 486
AgeI ACCGGT 1 cut(s) 312
AhlI ACTAGT 2 cut(s) 436, 2015
AjnI CCWGG 5 cut(s) 197, 564, 703, 802, 1048
AleI CACNNNNGTG 1 cut(s) 1240
AluBI AGCT 6 cut(s) 81, 161, 535, 1351, 1558, 1687
AluI AGCT 6 cut(s) 81, 161, 535, 1351, 1558, 1687
Alw21I GWGCWC 4 cut(s) 414, 909, 1237, 1280
Alw26I GTCTC 2 cut(s) 1567, 2082
Alw44I GTGCAC 1 cut(s) 1233
AlwI GGATC 2 cut(s) 794, 1899
AlwNI CAGNNNCTG 1 cut(s) 890
AoxI GGCC 2 cut(s) 806, 1651
ApaLI GTGCAC 1 cut(s) 1233
ApeKI GCWGC 2 cut(s) 1196, 1616
ApoI RAATTY 3 cut(s) 301, 1751, 2052
AsiGI ACCGGT 1 cut(s) 312
Asp700I GAANNNNTTC 1 cut(s) 1255
AspLEI GCGC 2 cut(s) 814, 1468
AspS9I GGNCC 1 cut(s) 806
AsuC2I CCSGG 2 cut(s) 297, 967
AsuHPI GGTGA 3 cut(s) 67, 257, 1964
AsuNHI GCTAGC 1 cut(s) 1468
BaeGI GKGCMC 1 cut(s) 1237
BaeI ACNNNNGTAYC 2 cut(s) 330, 363
BanI GGYRCC 1 cut(s) 992
BauI CACGAG 1 cut(s) 1953
BbsI GAAGAC 1 cut(s) 951
Bbv12I GWGCWC 4 cut(s) 414, 909, 1237, 1280
BbvI GCAGC 2 cut(s) 1208, 1628
BccI CCATC 4 cut(s) 236, 563, 1136, 1321
BciT130I CCWGG 5 cut(s) 199, 566, 705, 804, 1050
BclI TGATCA 1 cut(s) 604
BcnI CCSGG 2 cut(s) 297, 967
BcoDI GTCTC 2 cut(s) 1567, 2082
BcuI ACTAGT 2 cut(s) 436, 2015
BfaI CTAG 9 cut(s) 306, 342, 437, 1469, 1635, 1850, 2016, 2030, 2073
BfmI CTRYAG 3 cut(s) 124, 612, 724
BfoI RGCGCY 1 cut(s) 815
BglI GCCNNNNNGGC 1 cut(s) 1659
BglII AGATCT 2 cut(s) 1360, 2005
BisI GCNGC 4 cut(s) 1197, 1395, 1617, 1654
BlsI GCNGC 4 cut(s) 1198, 1396, 1618, 1655
Bme1390I CCNGG 7 cut(s) 199, 297, 566, 705, 804, 967, 1050
BmgT120I GGNCC 1 cut(s) 806
BmiI GGNNCC 2 cut(s) 994, 1796
BmrFI CCNGG 7 cut(s) 199, 297, 566, 705, 804, 967, 1050
BmrI ACTGGG 2 cut(s) 669, 720
BmsI GCATC 2 cut(s) 96, 758
BmtI GCTAGC 1 cut(s) 1472
BmuI ACTGGG 2 cut(s) 669, 720
BpiI GAAGAC 1 cut(s) 951
BpuEI CTTGAG 4 cut(s) 67, 1294, 1580, 1966
BpuMI CCSGG 2 cut(s) 297, 967
Bsa29I ATCGAT 1 cut(s) 1190
BsaBI GATNNNNATC 1 cut(s) 1080
BsaI GGTCTC 1 cut(s) 2082
BsaJI CCNNGG 7 cut(s) 198, 295, 703, 803, 1049, 1654, 2083
BsaWI WCCGGW 1 cut(s) 312
BsaXI ACNNNNNCTCC 2 cut(s) 423, 453
Bsc4I CCNNNNNNNGG 4 cut(s) 213, 710, 916, 1868
Bse118I RCCGGY 1 cut(s) 312
Bse1I ACTGG 2 cut(s) 664, 715
Bse8I GATNNNNATC 1 cut(s) 1080
BseBI CCWGG 5 cut(s) 199, 566, 705, 804, 1050
BseCI ATCGAT 1 cut(s) 1190
BseDI CCNNGG 7 cut(s) 198, 295, 703, 803, 1049, 1654, 2083
BseGI GGATG 5 cut(s) 241, 574, 607, 1109, 1845
BseJI GATNNNNATC 1 cut(s) 1080
BseLI CCNNNNNNNGG 4 cut(s) 213, 710, 916, 1868
BseMII CTCAG 2 cut(s) 350, 1583
BseNI ACTGG 2 cut(s) 664, 715
BseRI GAGGAG 2 cut(s) 167, 1568
BseSI GKGCMC 1 cut(s) 1237
BseXI GCAGC 2 cut(s) 1208, 1628
Bsh1236I CGCG 2 cut(s) 493, 1656
Bsh1285I CGRYCG 1 cut(s) 497
BshFI GGCC 2 cut(s) 808, 1653
BshNI GGYRCC 1 cut(s) 992
BshTI ACCGGT 1 cut(s) 312
BshVI ATCGAT 1 cut(s) 1190
BsiEI CGRYCG 1 cut(s) 497
BsiHKAI GWGCWC 4 cut(s) 414, 909, 1237, 1280
BsiSI CCGG 3 cut(s) 297, 313, 967
BslFI GGGAC 3 cut(s) 215, 728, 949
BslI CCNNNNNNNGG 4 cut(s) 213, 710, 916, 1868
BsmAI GTCTC 2 cut(s) 1567, 2082
BsmFI GGGAC 3 cut(s) 215, 728, 949
BsmI GAATGC 1 cut(s) 1384
BsnI GGCC 2 cut(s) 808, 1653
Bso31I GGTCTC 1 cut(s) 2082
Bsp1286I GDGCHC 4 cut(s) 414, 909, 1237, 1280
Bsp1407I TGTACA 1 cut(s) 1341
Bsp143I GATC 9 cut(s) 45, 604, 739, 799, 1360, 1409, 1597, 1904, 2005
Bsp19I CCATGG 1 cut(s) 2083
BspACI CCGC 4 cut(s) 493, 1394, 1654, 1656
BspANI GGCC 2 cut(s) 808, 1653
BspCNI CTCAG 2 cut(s) 349, 1582
BspDI ATCGAT 1 cut(s) 1190
BspFNI CGCG 2 cut(s) 493, 1656
BspHI TCATGA 1 cut(s) 852
BspLI GGNNCC 2 cut(s) 994, 1796
BspOI GCTAGC 1 cut(s) 1472
BspPI GGATC 2 cut(s) 794, 1899
BspT107I GGYRCC 1 cut(s) 992
BspTNI GGTCTC 1 cut(s) 2082
BsrFI RCCGGY 1 cut(s) 312
BsrGI TGTACA 1 cut(s) 1341
BsrI ACTGG 2 cut(s) 664, 715
BssAI RCCGGY 1 cut(s) 312
BssECI CCNNGG 7 cut(s) 198, 295, 703, 803, 1049, 1654, 2083
BssMI GATC 9 cut(s) 45, 604, 739, 799, 1360, 1409, 1597, 1904, 2005
BssSI CACGAG 1 cut(s) 1953
BssT1I CCWWGG 1 cut(s) 2083
Bst2BI CACGAG 1 cut(s) 1953
Bst2UI CCWGG 5 cut(s) 199, 566, 705, 804, 1050
Bst4CI ACNGT 6 cut(s) 361, 886, 987, 1043, 1387, 1458
Bst6I CTCTTC 1 cut(s) 176
BstAUI TGTACA 1 cut(s) 1341
BstC8I GCNNGC 4 cut(s) 810, 1443, 1470, 1494
BstDEI CTNAG 5 cut(s) 336, 731, 901, 1247, 1569
BstDSI CCRYGG 2 cut(s) 1654, 2083
BstENI CCTNNNNNAGG 1 cut(s) 1866
BstF5I GGATG 5 cut(s) 241, 574, 607, 1109, 1845
BstFNI CGCG 2 cut(s) 493, 1656
BstH2I RGCGCY 1 cut(s) 815
BstHHI GCGC 2 cut(s) 814, 1468
BstKTI GATC 9 cut(s) 48, 607, 742, 802, 1363, 1412, 1600, 1907, 2008
BstMAI GTCTC 2 cut(s) 1567, 2082
BstMBI GATC 9 cut(s) 45, 604, 739, 799, 1360, 1409, 1597, 1904, 2005
BstMCI CGRYCG 1 cut(s) 497
BstMWI GCNNNNNNNGC 4 cut(s) 1008, 1400, 1659, 1775
BstNI CCWGG 5 cut(s) 199, 566, 705, 804, 1050
BstNSI RCATGY 1 cut(s) 1861
BstSCI CCNGG 7 cut(s) 197, 295, 564, 703, 802, 965, 1048
BstSFI CTRYAG 3 cut(s) 124, 612, 724
BstSLI GKGCMC 1 cut(s) 1237
BstUI CGCG 2 cut(s) 493, 1656
BstV1I GCAGC 2 cut(s) 1208, 1628
BstV2I GAAGAC 1 cut(s) 951
BstX2I RGATCY 2 cut(s) 1360, 2005
BstYI RGATCY 2 cut(s) 1360, 2005
Bsu15I ATCGAT 1 cut(s) 1190
BsuRI GGCC 2 cut(s) 808, 1653
BsuTUI ATCGAT 1 cut(s) 1190
BtgI CCRYGG 2 cut(s) 1654, 2083
BtsCI GGATG 5 cut(s) 241, 574, 607, 1109, 1845
BtsI GCAGTG 1 cut(s) 1263
BtsIMutI CAGTG 4 cut(s) 366, 891, 992, 1263
Cac8I GCNNGC 4 cut(s) 810, 1443, 1470, 1494
CaiI CAGNNNCTG 1 cut(s) 890
CciI TCATGA 1 cut(s) 852
CfoI GCGC 2 cut(s) 814, 1468
Cfr10I RCCGGY 1 cut(s) 312
Cfr13I GGNCC 1 cut(s) 806
Cfr42I CCGCGG 1 cut(s) 1657
ClaI ATCGAT 1 cut(s) 1190
CseI GACGC 1 cut(s) 1188
Csp6I GTAC 3 cut(s) 979, 1342, 1478
CspAI ACCGGT 1 cut(s) 312
CviAII CATG 8 cut(s) 208, 457, 853, 1311, 1497, 1858, 2068, 2084
CviQI GTAC 3 cut(s) 979, 1342, 1478
DdeI CTNAG 5 cut(s) 336, 731, 901, 1247, 1569
DpnI GATC 9 cut(s) 47, 606, 741, 801, 1362, 1411, 1599, 1906, 2007
DpnII GATC 9 cut(s) 45, 604, 739, 799, 1360, 1409, 1597, 1904, 2005
EaeI YGGCCR 1 cut(s) 1651
Eam1104I CTCTTC 1 cut(s) 176
EarI CTCTTC 1 cut(s) 176
Eco130I CCWWGG 1 cut(s) 2083
Eco31I GGTCTC 1 cut(s) 2082
Eco57I CTGAAG 2 cut(s) 274, 1716
EcoNI CCTNNNNNAGG 1 cut(s) 1866
EcoRII CCWGG 5 cut(s) 197, 564, 703, 802, 1048
EcoT14I CCWWGG 1 cut(s) 2083
EcoT22I ATGCAT 1 cut(s) 751
ErhI CCWWGG 1 cut(s) 2083
FaeI CATG 8 cut(s) 211, 460, 856, 1314, 1500, 1861, 2071, 2087
FalI AAGNNNNNCTT 6 cut(s) 150, 182, 932, 964, 1755, 1787
FaqI GGGAC 3 cut(s) 215, 728, 949
FatI CATG 8 cut(s) 207, 456, 852, 1310, 1496, 1857, 2067, 2083
FbaI TGATCA 1 cut(s) 604
FblI GTMKAC 2 cut(s) 479, 1460
Fnu4HI GCNGC 4 cut(s) 1197, 1395, 1617, 1654
FokI GGATG 5 cut(s) 248, 581, 594, 1116, 1852
Fsp4HI GCNGC 4 cut(s) 1197, 1395, 1617, 1654
FspBI CTAG 9 cut(s) 306, 342, 437, 1469, 1635, 1850, 2016, 2030, 2073
GlaI GCGC 2 cut(s) 813, 1467
GluI GCNGC 4 cut(s) 1197, 1395, 1617, 1654
HaeII RGCGCY 1 cut(s) 815
HaeIII GGCC 2 cut(s) 808, 1653
HapII CCGG 3 cut(s) 297, 313, 967
HgaI GACGC 1 cut(s) 1188
HhaI GCGC 2 cut(s) 814, 1468
Hin1II CATG 8 cut(s) 211, 460, 856, 1314, 1500, 1861, 2071, 2087
Hin6I GCGC 2 cut(s) 812, 1466
HinP1I GCGC 2 cut(s) 812, 1466
HincII GTYRAC 1 cut(s) 511
HindII GTYRAC 1 cut(s) 511
HinfI GANTC 7 cut(s) 60, 324, 893, 1081, 1877, 1960, 1979
HpaI GTTAAC 1 cut(s) 511
HpaII CCGG 3 cut(s) 297, 313, 967
HphI GGTGA 3 cut(s) 67, 257, 1964
Hpy166II GTNNAC 6 cut(s) 480, 511, 1235, 1342, 1344, 1461
Hpy188I TCNGA 6 cut(s) 339, 739, 960, 1086, 1572, 2059
Hpy188III TCNNGA 5 cut(s) 853, 1181, 1601, 1734, 1983
Hpy8I GTNNAC 6 cut(s) 480, 511, 1235, 1342, 1344, 1461
Hpy99I CGWCG 2 cut(s) 1151, 1204
HpyAV CCTTC 4 cut(s) 226, 934, 1283, 1918
HpyCH4III ACNGT 6 cut(s) 361, 886, 987, 1043, 1387, 1458
HpyCH4IV ACGT 1 cut(s) 486
HpyF10VI GCNNNNNNNGC 4 cut(s) 1008, 1400, 1659, 1775
HpyF3I CTNAG 5 cut(s) 336, 731, 901, 1247, 1569
HpySE526I ACGT 1 cut(s) 486
Hsp92II CATG 8 cut(s) 211, 460, 856, 1314, 1500, 1861, 2071, 2087
HspAI GCGC 2 cut(s) 812, 1466
Ksp22I TGATCA 1 cut(s) 604
KspAI GTTAAC 1 cut(s) 511
KspI CCGCGG 1 cut(s) 1657
Kzo9I GATC 9 cut(s) 45, 604, 739, 799, 1360, 1409, 1597, 1904, 2005
LmnI GCTCC 2 cut(s) 961, 1555
Lsp1109I GCAGC 2 cut(s) 1208, 1628
LweI GCATC 2 cut(s) 96, 758
MaeI CTAG 9 cut(s) 306, 342, 437, 1469, 1635, 1850, 2016, 2030, 2073
MaeII ACGT 1 cut(s) 486
MaeIII GTNAC 6 cut(s) 245, 690, 886, 971, 1037, 1220
MalI GATC 9 cut(s) 47, 606, 741, 801, 1362, 1411, 1599, 1906, 2007
MboI GATC 9 cut(s) 45, 604, 739, 799, 1360, 1409, 1597, 1904, 2005
MfeI CAATTG 1 cut(s) 227
MflI RGATCY 2 cut(s) 1360, 2005
MhlI GDGCHC 4 cut(s) 414, 909, 1237, 1280
MlyI GAGTC 4 cut(s) 54, 333, 1871, 1973
MmeI TCCRAC 2 cut(s) 301, 2101
Mph1103I ATGCAT 1 cut(s) 751
MroXI GAANNNNTTC 1 cut(s) 1255
MseI TTAA 7 cut(s) 510, 623, 677, 1023, 1173, 1205, 1755
MslI CAYNNNNRTG 2 cut(s) 1240, 1501
MspA1I CMGCKG 1 cut(s) 1656
MspI CCGG 3 cut(s) 297, 313, 967
MspR9I CCNGG 7 cut(s) 199, 297, 566, 705, 804, 967, 1050
MunI CAATTG 1 cut(s) 227
Mva1269I GAATGC 1 cut(s) 1384
MvaI CCWGG 5 cut(s) 199, 566, 705, 804, 1050
MvnI CGCG 2 cut(s) 493, 1656
MwoI GCNNNNNNNGC 4 cut(s) 1008, 1400, 1659, 1775
NciI CCSGG 2 cut(s) 297, 967
NcoI CCATGG 1 cut(s) 2083
NdeII GATC 9 cut(s) 45, 604, 739, 799, 1360, 1409, 1597, 1904, 2005
NheI GCTAGC 1 cut(s) 1468
NlaIII CATG 8 cut(s) 211, 460, 856, 1314, 1500, 1861, 2071, 2087
NlaIV GGNNCC 2 cut(s) 994, 1796
NmeAIII GCCGAG 1 cut(s) 166
NmuCI GTSAC 6 cut(s) 245, 690, 886, 971, 1037, 1220
NsiI ATGCAT 1 cut(s) 751
NspI RCATGY 1 cut(s) 1861
OliI CACNNNNGTG 1 cut(s) 1240
PagI TCATGA 1 cut(s) 852
PcsI WCGNNNNNNNCGW 1 cut(s) 1196
PctI GAATGC 1 cut(s) 1384
PdmI GAANNNNTTC 1 cut(s) 1255
PfeI GAWTC 3 cut(s) 893, 1081, 1960
PfoI TCCNGGA 1 cut(s) 564
PinAI ACCGGT 1 cut(s) 312
PkrI GCNGC 4 cut(s) 1198, 1396, 1618, 1655
PleI GAGTC 4 cut(s) 54, 332, 1871, 1973
PpsI GAGTC 4 cut(s) 54, 332, 1871, 1973
PsiI TTATAA 2 cut(s) 1157, 1677
Psp6I CCWGG 5 cut(s) 197, 564, 703, 802, 1048
PspGI CCWGG 5 cut(s) 197, 564, 703, 802, 1048
PspN4I GGNNCC 2 cut(s) 994, 1796
PspPI GGNCC 1 cut(s) 806
PstNI CAGNNNCTG 1 cut(s) 890
PsuI RGATCY 2 cut(s) 1360, 2005
RsaI GTAC 3 cut(s) 980, 1343, 1479
RsaNI GTAC 3 cut(s) 979, 1342, 1478
RseI CAYNNNNRTG 2 cut(s) 1240, 1501
SacII CCGCGG 1 cut(s) 1657
SaqAI TTAA 7 cut(s) 510, 623, 677, 1023, 1173, 1205, 1755
SatI GCNGC 4 cut(s) 1197, 1395, 1617, 1654
Sau3AI GATC 9 cut(s) 45, 604, 739, 799, 1360, 1409, 1597, 1904, 2005
Sau96I GGNCC 1 cut(s) 806
SchI GAGTC 4 cut(s) 54, 333, 1871, 1973
ScrFI CCNGG 7 cut(s) 199, 297, 566, 705, 804, 967, 1050
SduI GDGCHC 4 cut(s) 414, 909, 1237, 1280
SfaNI GCATC 2 cut(s) 96, 758
SfcI CTRYAG 3 cut(s) 124, 612, 724
Sfr303I CCGCGG 1 cut(s) 1657
SgrBI CCGCGG 1 cut(s) 1657
SmiMI CAYNNNNRTG 2 cut(s) 1240, 1501
SmlI CTYRAG 4 cut(s) 82, 1273, 1559, 1981
SmoI CTYRAG 4 cut(s) 82, 1273, 1559, 1981
SpeI ACTAGT 2 cut(s) 436, 2015
SsiI CCGC 4 cut(s) 493, 1394, 1654, 1656
SspI AATATT 1 cut(s) 2079
SspMI CTAG 9 cut(s) 306, 342, 437, 1469, 1635, 1850, 2016, 2030, 2073
StyD4I CCNGG 7 cut(s) 197, 295, 564, 703, 802, 965, 1048
StyI CCWWGG 1 cut(s) 2083
TaaI ACNGT 6 cut(s) 361, 886, 987, 1043, 1387, 1458
TaiI ACGT 1 cut(s) 489
TaqI TCGA 3 cut(s) 1117, 1190, 1596
TatI WGTACW 1 cut(s) 1341
TauI GCSGC 2 cut(s) 1397, 1656
TfiI GAWTC 3 cut(s) 893, 1081, 1960
Tru1I TTAA 7 cut(s) 510, 623, 677, 1023, 1173, 1205, 1755
Tru9I TTAA 7 cut(s) 510, 623, 677, 1023, 1173, 1205, 1755
TscAI CASTG 4 cut(s) 366, 891, 992, 1270
TseFI GTSAC 6 cut(s) 245, 690, 886, 971, 1037, 1220
TseI GCWGC 2 cut(s) 1196, 1616
Tsp45I GTSAC 6 cut(s) 245, 690, 886, 971, 1037, 1220
TspGWI ACGGA 2 cut(s) 996, 1959
TspRI CASTG 4 cut(s) 366, 891, 992, 1270
VneI GTGCAC 1 cut(s) 1233
XagI CCTNNNNNAGG 1 cut(s) 1866
XapI RAATTY 3 cut(s) 301, 1751, 2052
XceI RCATGY 1 cut(s) 1861
XmiI GTMKAC 2 cut(s) 479, 1460
XmnI GAANNNNTTC 1 cut(s) 1255
XspI CTAG 9 cut(s) 306, 342, 437, 1469, 1635, 1850, 2016, 2030, 2073
Zsp2I ATGCAT 1 cut(s) 751
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.