MD05G1328300.v1.1

serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr05
Physical Location & Seq
Forward (+)
45377626 .. 45378543
918 bp
Loading structure...
UTR
Exon/CDS
Intron
MD05G1328300.v1.1.491

Sequence Viewer

Length: 918 bp
ATGTTACTGAAAGCTTTGCTTGTTGTTTCCCTCCTCTTCCCATTTTGCACTTCCATTGACACCATAGAAATGGACCAACATGTAAAGGATGGTGATCTTCTGGTGTCCAAAGAAAACGTCTTCGCATTAGGGTTCTTCAGCCCCAGAAACTCCAGCTCCAGGTACGTCGGAATTTGGTATGCTGAAAAAGATGAAAAAGATCAAAAGGCAGTGGTTTGGGTAGCAAACAGAAACGACCCCATCAATGATACCTCTGGTGTCCTAACTATAGACAGGTATGGGAGACTGCTTCTTTATTCTAACAATATGCAGAACATTCCTGTGTGGTCTACAAATGTGACGGTTCAAACTGCGAGCACTAGTTGCATGGCTCAGCTTTTAGATTCTGGAAATTTAGTTCTTTTCCGGGATAATAAAAGCAAAAATTTTATGTGGCAGAGTTTTGACTATCCTACAGATACTCTCCTTCCGGGTATGAAACTAGGCATGAATTGGAAATTGGGGATAGAATGGGTCTTAACATCTTGGAAGTCACAAGATGACCCTGGAACTGGGGAATACACCAATAGGCTCTATTCCAATCAGACTGCCACCCCCGAATTTTTTGTTTTTTATAAAGGTTTGACTCCGCATTGGCGATCTGAGCCAGTGGACACTTTTGTCAGTAATCAGGACGAAATGTATTTCTTTCTTAAAAACGATAGCACTTCAACAAGGGTGGTGTTGAAGGATTCTGGGTTAGTGCAACACCTCAGGTGGAACAATGCGGATAGAGAATGGAAGGAACTATGGTCAGGGCCAAAATATCGGTGTGACCAGTATGGAGAGTGCGGTGCCAACAGCAAATGTATCCCTGACAATTTCAATTCGTTTGAGTGTGAGTGTCTGCCAGGGTATGAACCGAATGTTAGAGTATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

306

Amino Acids

35.08

Weight (kDa)

5.12

Isoelectric Point (pI)

33.1

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 71 - 177 6.9e-37 D-mannose binding lectin
S_locus_glycop PF00954 219 - 302 2.6e-18 S-locus glycoprotein domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000112)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g03320 FvH4_3g03322 FvH4_3g03323 FvH4_3g03340 FvH4_3g03350 FvH4_3g03351 FvH4_3g03370 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g06140 FvH4_6g00257 FvH4_6g00257 FvH4_6g00270 FvH4_6g00300 FvH4_6g20800 FvH4_6g20800 FvH4_6g20800 FvH4_6g20800 FvH4_6g20800
malus_domestica MD05G1232700.v1.1 MD05G1327700.v1.1 MD05G1327800.v1.1 MD05G1327900.v1.1 MD05G1328000.v1.1 MD05G1328200.v1.1 MD05G1328300.v1.1 MD05G1328500.v1.1 MD05G1332000.v1.1 MD05G1332100.v1.1 MD10G1307600.v1.1 MD10G1307800.v1.1
prunus_persica Prupe.4G031900_v2.0.a1 Prupe.4G032000_v2.0.a1 Prupe.4G032000_v2.0.a1 Prupe.4G032100_v2.0.a1 Prupe.4G032200_v2.0.a1 Prupe.4G032200_v2.0.a1 Prupe.4G032200_v2.0.a1
pyrus_communis pycom05g30180 pycom05g30190 pycom05g30200 pycom05g30210 pycom10g25920 pycom10g25930
rosa_chinensis RchiOBHm_Chr2g0130831 RchiOBHm_Chr2g0132531 RchiOBHm_Chr2g0132541 RchiOBHm_Chr3g0455681 RchiOBHm_Chr3g0476681 RchiOBHm_Chr3g0476761 RchiOBHm_Chr3g0476771 RchiOBHm_Chr3g0476791 RchiOBHm_Chr3g0476801 RchiOBHm_Chr3g0476811 RchiOBHm_Chr4g0413551 RchiOBHm_Chr4g0413561 RchiOBHm_Chr5g0002911 RchiOBHm_Chr5g0005071 RchiOBHm_Chr5g0005101 RchiOBHm_Chr5g0005111 RchiOBHm_Chr5g0005121 RchiOBHm_Chr5g0005131 RchiOBHm_Chr5g0005141 RchiOBHm_Chr5g0005161 RchiOBHm_Chr5g0005171 RchiOBHm_Chr5g0006341 RchiOBHm_Chr5g0046161 RchiOBHm_Chr5g0046171 RchiOBHm_Chr5g0046181 RchiOBHm_Chr5g0046221 RchiOBHm_Chr5g0046231 RchiOBHm_Chr7g0224061 RchiOBHm_Chr7g0224081 RchiOBHm_Chr7g0224101 RchiOBHm_Chr7g0224111 RchiOBHm_Chr7g0224121
rosa_laevigata RLG00000010193 RLG00000019146 RLG00000019148 RLG00000019149 RLG00000019150 RLG00000023750 RLG00000023751 RLG00000023753 RLG00000029486 RLG00000031068 RLG00000031069 RLG00000031284 RLG00000031285 RLG00000031286 RLG00000031289 RLG00000031290 RLG00000031291 RLG00000031292 RLG00000031293 RLG00000031294 RLG00000031295 RLG00000031296 RLG00000031297 RLG00000031363 RLG00000032618 RLG00000032619
rosa_multiflora Rmu_co8147584.1_g000001 Rmu_co8205828.1_g000001 Rmu_co8373645.1_g000001 Rmu_co8407679.1_g000001 Rmu_co8452561.1_g000001 Rmu_sc0001035.1_g000076 Rmu_sc0001884.1_g000026 Rmu_sc0001884.1_g000027 Rmu_sc0001884.1_g000035 Rmu_sc0002157.1_g000026 Rmu_sc0002399.1_g000006 Rmu_sc0002399.1_g000007 Rmu_sc0002883.1_g000010 Rmu_sc0003629.1_g000014 Rmu_sc0003884.1_g000004 Rmu_sc0007865.1_g000005 Rmu_sc0008085.1_g000013 Rmu_sc0008085.1_g000014 Rmu_sc0008085.1_g000016 Rmu_sc0008085.1_g000018 Rmu_sc0008432.1_g000004 Rmu_sc0008714.1_g000002 Rmu_sc0009296.1_g000008 Rmu_sc0009296.1_g000009 Rmu_sc0009296.1_g000011 Rmu_sc0010281.1_g000001 Rmu_sc0010281.1_g000002 Rmu_sc0010714.1_g000011 Rmu_sc0010714.1_g000016 Rmu_sc0011169.1_g000001 Rmu_sc0011169.1_g000007 Rmu_sc0013603.1_g000006 Rmu_sc0020478.1_g000003 Rmu_sc0020478.1_g000007 Rmu_sc0025106.1_g000012 Rmu_sc0032709.1_g000001 Rmu_sc0033028.1_g000001
rosa_roxburghii Rroxscaffold_1G00069570 Rroxscaffold_1G00069610 Rroxscaffold_1G00069620 Rroxscaffold_1G00070480 Rroxscaffold_1G00070490 Rroxscaffold_1G00070500 Rroxscaffold_1G00070510 Rroxscaffold_1G00070520 Rroxscaffold_1G00070530 Rroxscaffold_1G00070540 Rroxscaffold_1G00070550 Rroxscaffold_1G00070590 Rroxscaffold_1G00072950 Rroxscaffold_1G00073080 Rroxscaffold_2G00111810 Rroxscaffold_2G00111820 Rroxscaffold_2G00113530 Rroxscaffold_2G00113870 Rroxscaffold_6G00405010 Rroxscaffold_6G00405020 Rroxscaffold_6G00423590 Rroxscaffold_6G00424100
rosa_rugosa Rorug02G0293200 Rorug02G0293300 Rorug02G0293400 Rorug02G0305900 Rorug02G0305900 Rorug03G0009100 Rorug03G0157000 Rorug03G0157000 Rorug03G0304900 Rorug04G0400500 Rorug04G0415200 Rorug04G0415300 Rorug04G0415400 Rorug04G0415500 Rorug04G0421100 Rorug05G0068000 Rorug05G0068100 Rorug05G0068200 Rorug05G0068500 Rorug05G0224600 Rorug05G0224700
rosa_samantha Rh2CG331700 Rh2CG341600 Rh2CG341700 Rh2DG381200 Rh3DG071200 Rh3DG233400 Rh3DG233500 Rh3DG233600 Rh5AG043100 Rh5CG026000 Rh5CG047700 Rh5CG047800 Rh5CG047900 Rh5CG048000 Rh5CG048100 Rh5CG048300 Rh5CG056500 Rh5CG340500 Rh5CG340700 Rh5CG340800 Rh7AG365000
rosa_wichuraiana Rw0G002360 Rw0G002370 Rw0G012520 Rw0G018230 Rw0G019190 Rw2G027480 Rw2G029150 Rw3G005520 Rw3G005880 Rw3G005890 Rw3G018840 Rw3G018850 Rw3G018870 Rw3G018880 Rw3G020740 Rw5G002190 Rw5G004180 Rw5G004190 Rw5G004890 Rw5G013960 Rw5G014000 Rw5G028610 Rw7G030910 Rw7G030920

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 615
AasI GACNNNNNNGTC 1 cut(s) 659
AccB1I GGYRCC 1 cut(s) 833
AccI GTMKAC 1 cut(s) 329
AciI CCGC 3 cut(s) 629, 767, 831
AcsI RAATTY 4 cut(s) 171, 391, 424, 599
AcuI CTGAAG 1 cut(s) 121
AfaI GTAC 1 cut(s) 164
AfiI CCNNNNNNNGG 2 cut(s) 159, 551
AflIII ACRYGT 1 cut(s) 79
AgsI TTSAA 4 cut(s) 347, 711, 727, 865
AhlI ACTAGT 1 cut(s) 359
AjnI CCWGG 3 cut(s) 158, 544, 889
AjuI GAANNNNNNNTTGG 2 cut(s) 482, 514
AloI GAACNNNNNNTCC 2 cut(s) 381, 413
AluBI AGCT 3 cut(s) 14, 156, 376
AluI AGCT 3 cut(s) 14, 156, 376
Alw21I GWGCWC 1 cut(s) 359
Alw26I GTCTC 1 cut(s) 277
AoxI GGCC 1 cut(s) 797
ApoI RAATTY 4 cut(s) 171, 391, 424, 599
ArsI GACNNNNNNTTYG 2 cut(s) 102, 134
AspS9I GGNCC 2 cut(s) 73, 797
AsuC2I CCSGG 2 cut(s) 407, 471
AsuHPI GGTGA 1 cut(s) 104
AvaII GGWCC 1 cut(s) 73
AxyI CCTNAGG 1 cut(s) 752
BanI GGYRCC 1 cut(s) 833
BbsI GAAGAC 1 cut(s) 112
Bbv12I GWGCWC 1 cut(s) 359
BccI CCATC 2 cut(s) 83, 248
BciT130I CCWGG 3 cut(s) 160, 546, 891
BciVI GTATCC 1 cut(s) 860
BcnI CCSGG 2 cut(s) 407, 471
BcoDI GTCTC 1 cut(s) 277
BcuI ACTAGT 1 cut(s) 359
BfaI CTAG 2 cut(s) 360, 482
BfmI CTRYAG 2 cut(s) 267, 453
BfuI GTATCC 1 cut(s) 860
BlpI GCTNAGC 1 cut(s) 372
Bme1390I CCNGG 5 cut(s) 160, 407, 471, 546, 891
Bme18I GGWCC 1 cut(s) 73
BmgT120I GGNCC 2 cut(s) 73, 797
BmiI GGNNCC 1 cut(s) 835
BmrFI CCNGG 5 cut(s) 160, 407, 471, 546, 891
BmrI ACTGGG 1 cut(s) 561
BmuI ACTGGG 1 cut(s) 561
BpiI GAAGAC 1 cut(s) 112
BpmI CTGGAG 2 cut(s) 136, 142
Bpu1102I GCTNAGC 1 cut(s) 372
BpuMI CCSGG 2 cut(s) 407, 471
BsaBI GATNNNNATC 1 cut(s) 93
BsaJI CCNNGG 2 cut(s) 544, 890
BsaXI ACNNNNNCTCC 2 cut(s) 140, 170
Bsc4I CCNNNNNNNGG 2 cut(s) 159, 551
Bse1I ACTGG 3 cut(s) 556, 647, 817
Bse21I CCTNAGG 1 cut(s) 752
Bse8I GATNNNNATC 1 cut(s) 93
BseBI CCWGG 3 cut(s) 160, 546, 891
BseDI CCNNGG 2 cut(s) 544, 890
BseGI GGATG 1 cut(s) 94
BseJI GATNNNNATC 1 cut(s) 93
BseLI CCNNNNNNNGG 2 cut(s) 159, 551
BseMII CTCAG 3 cut(s) 386, 633, 766
BseNI ACTGG 3 cut(s) 556, 647, 817
BseRI GAGGAG 1 cut(s) 23
BshFI GGCC 1 cut(s) 799
BshNI GGYRCC 1 cut(s) 833
BsiHKAI GWGCWC 1 cut(s) 359
BsiSI CCGG 2 cut(s) 406, 470
BslI CCNNNNNNNGG 2 cut(s) 159, 551
BsmAI GTCTC 1 cut(s) 277
BsnI GGCC 1 cut(s) 799
Bsp1286I GDGCHC 1 cut(s) 359
Bsp143I GATC 3 cut(s) 94, 199, 638
Bsp1720I GCTNAGC 1 cut(s) 372
BspACI CCGC 3 cut(s) 629, 767, 831
BspANI GGCC 1 cut(s) 799
BspCNI CTCAG 3 cut(s) 385, 634, 765
BspLI GGNNCC 1 cut(s) 835
BspT107I GGYRCC 1 cut(s) 833
BsrI ACTGG 3 cut(s) 556, 647, 817
BssECI CCNNGG 2 cut(s) 544, 890
BssMI GATC 3 cut(s) 94, 199, 638
Bst2UI CCWGG 3 cut(s) 160, 546, 891
Bst4CI ACNGT 1 cut(s) 343
Bst6I CTCTTC 1 cut(s) 41
BstAPI GCANNNNNTGC 1 cut(s) 363
BstC8I GCNNGC 1 cut(s) 355
BstDEI CTNAG 3 cut(s) 372, 642, 752
BstF5I GGATG 1 cut(s) 94
BstKTI GATC 3 cut(s) 97, 202, 641
BstMAI GTCTC 1 cut(s) 277
BstMBI GATC 3 cut(s) 94, 199, 638
BstMWI GCNNNNNNNGC 2 cut(s) 363, 643
BstNI CCWGG 3 cut(s) 160, 546, 891
BstNSI RCATGY 1 cut(s) 83
BstSCI CCNGG 5 cut(s) 158, 405, 469, 544, 889
BstSFI CTRYAG 2 cut(s) 267, 453
BstV2I GAAGAC 1 cut(s) 112
BstXI CCANNNNNNTGG 1 cut(s) 70
Bsu36I CCTNAGG 1 cut(s) 752
BsuI GTATCC 1 cut(s) 860
BsuRI GGCC 1 cut(s) 799
BtsCI GGATG 1 cut(s) 94
BtsI GCAGTG 1 cut(s) 216
BtsIMutI CAGTG 2 cut(s) 216, 654
Cac8I GCNNGC 1 cut(s) 355
Cfr13I GGNCC 2 cut(s) 73, 797
Csp6I GTAC 1 cut(s) 163
CspCI CAANNNNNGTGG 2 cut(s) 699, 734
CviAII CATG 3 cut(s) 80, 367, 487
CviJI RGCY 8 cut(s) 14, 141, 156, 371, 376, 571, 646, 799
CviKI_1 RGCY 8 cut(s) 14, 141, 156, 371, 376, 571, 646, 799
CviQI GTAC 1 cut(s) 163
DdeI CTNAG 3 cut(s) 372, 642, 752
DpnI GATC 3 cut(s) 96, 201, 640
DpnII GATC 3 cut(s) 94, 199, 638
DrdI GACNNNNNNGTC 1 cut(s) 659
DseDI GACNNNNNNGTC 1 cut(s) 659
Eam1104I CTCTTC 1 cut(s) 41
EarI CTCTTC 1 cut(s) 41
Eco47I GGWCC 1 cut(s) 73
Eco57I CTGAAG 1 cut(s) 121
Eco81I CCTNAGG 1 cut(s) 752
EcoRII CCWGG 3 cut(s) 158, 544, 889
FaeI CATG 3 cut(s) 83, 370, 490
FalI AAGNNNNNCTT 1 cut(s) 35
FatI CATG 3 cut(s) 79, 366, 486
FblI GTMKAC 1 cut(s) 329
FokI GGATG 1 cut(s) 101
FspBI CTAG 2 cut(s) 360, 482
GsuI CTGGAG 2 cut(s) 136, 142
HaeIII GGCC 1 cut(s) 799
HapII CCGG 2 cut(s) 406, 470
Hin1II CATG 3 cut(s) 83, 370, 490
HindIII AAGCTT 1 cut(s) 12
HinfI GANTC 3 cut(s) 383, 625, 731
HpaII CCGG 2 cut(s) 406, 470
HphI GGTGA 1 cut(s) 104
Hpy166II GTNNAC 2 cut(s) 330, 652
Hpy188I TCNGA 3 cut(s) 170, 585, 643
Hpy188III TCNNGA 2 cut(s) 387, 671
Hpy8I GTNNAC 2 cut(s) 330, 652
Hpy99I CGWCG 1 cut(s) 170
HpyAV CCTTC 3 cut(s) 476, 721, 775
HpyCH4III ACNGT 1 cut(s) 343
HpyCH4IV ACGT 2 cut(s) 117, 165
HpyCH4V TGCA 4 cut(s) 48, 310, 366, 745
HpyF10VI GCNNNNNNNGC 2 cut(s) 363, 643
HpyF3I CTNAG 3 cut(s) 372, 642, 752
HpySE526I ACGT 2 cut(s) 117, 165
Hsp92II CATG 3 cut(s) 83, 370, 490
Kzo9I GATC 3 cut(s) 94, 199, 638
LmnI GCTCC 1 cut(s) 161
MaeI CTAG 2 cut(s) 360, 482
MaeII ACGT 2 cut(s) 117, 165
MaeIII GTNAC 4 cut(s) 3, 337, 531, 812
MalI GATC 3 cut(s) 96, 201, 640
MboI GATC 3 cut(s) 94, 199, 638
MboII GAAGA 4 cut(s) 28, 89, 112, 127
MhlI GDGCHC 1 cut(s) 359
MluCI AATT 8 cut(s) 171, 391, 424, 490, 497, 599, 859, 865
MlyI GAGTC 1 cut(s) 619
MmeI TCCRAC 1 cut(s) 148
MnlI CCTC 4 cut(s) 41, 44, 262, 761
MseI TTAA 2 cut(s) 518, 693
MslI CAYNNNNRTG 2 cut(s) 68, 320
MspI CCGG 2 cut(s) 406, 470
MspR9I CCNGG 5 cut(s) 160, 407, 471, 546, 891
MvaI CCWGG 3 cut(s) 160, 546, 891
MwoI GCNNNNNNNGC 2 cut(s) 363, 643
NciI CCSGG 2 cut(s) 407, 471
NdeII GATC 3 cut(s) 94, 199, 638
NlaIII CATG 3 cut(s) 83, 370, 490
NlaIV GGNNCC 1 cut(s) 835
NmuCI GTSAC 3 cut(s) 337, 531, 812
NspI RCATGY 1 cut(s) 83
PciI ACATGT 1 cut(s) 79
PfeI GAWTC 2 cut(s) 383, 731
PfoI TCCNGGA 1 cut(s) 405
PleI GAGTC 1 cut(s) 619
PpsI GAGTC 1 cut(s) 619
PscI ACATGT 1 cut(s) 79
PsiI TTATAA 1 cut(s) 615
Psp6I CCWGG 3 cut(s) 158, 544, 889
PspGI CCWGG 3 cut(s) 158, 544, 889
PspN4I GGNNCC 1 cut(s) 835
PspPI GGNCC 2 cut(s) 73, 797
RsaI GTAC 1 cut(s) 164
RsaNI GTAC 1 cut(s) 163
RseI CAYNNNNRTG 2 cut(s) 68, 320
SaqAI TTAA 2 cut(s) 518, 693
Sau3AI GATC 3 cut(s) 94, 199, 638
Sau96I GGNCC 2 cut(s) 73, 797
SchI GAGTC 1 cut(s) 619
ScrFI CCNGG 5 cut(s) 160, 407, 471, 546, 891
SduI GDGCHC 1 cut(s) 359
SfcI CTRYAG 2 cut(s) 267, 453
SinI GGWCC 1 cut(s) 73
SmiMI CAYNNNNRTG 2 cut(s) 68, 320
SpeI ACTAGT 1 cut(s) 359
Sse9I AATT 8 cut(s) 171, 391, 424, 490, 497, 599, 859, 865
SsiI CCGC 3 cut(s) 629, 767, 831
SspMI CTAG 2 cut(s) 360, 482
StyD4I CCNGG 5 cut(s) 158, 405, 469, 544, 889
TaaI ACNGT 1 cut(s) 343
TaiI ACGT 2 cut(s) 120, 168
TasI AATT 8 cut(s) 171, 391, 424, 490, 497, 599, 859, 865
TfiI GAWTC 2 cut(s) 383, 731
Tru1I TTAA 2 cut(s) 518, 693
Tru9I TTAA 2 cut(s) 518, 693
TscAI CASTG 2 cut(s) 216, 654
TseFI GTSAC 3 cut(s) 337, 531, 812
Tsp45I GTSAC 3 cut(s) 337, 531, 812
TspDTI ATGAA 4 cut(s) 207, 491, 503, 912
TspRI CASTG 2 cut(s) 216, 654
VpaK11BI GGWCC 1 cut(s) 73
XapI RAATTY 4 cut(s) 171, 391, 424, 599
XceI RCATGY 1 cut(s) 83
XmiI GTMKAC 1 cut(s) 329
XspI CTAG 2 cut(s) 360, 482
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.