Rmu_sc0008085.1_g000014

serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0008085.1
Physical Location & Seq
Forward (+)
44048 .. 44608
561 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0008085.1_g000014.1.cds

Sequence Viewer

Length: 561 bp
atgctgttgaaatctctgcttctcttcctcctcttccaagtttgcacttccagggacaccttgagatcgaacgaagaactcaaggatgatgatggtggacttctggtgtccaaagaaagcagctttgagttgggtttcttcagccctggaaattctagcaaccgctatgttgggatttggtattctcaatctaaagtatctgaaaaaacagtggtgtggatcgcaaacagagacaaccccatcaatgatacctctggagttttcaccataaacaggtatggagacctagttctttatgcttataacatggagaccagtcctatatggtctgcagatgcgtctctttcagtcaaaaacaccagcaccttatctgcatatgtacagcttttggatacaggaaacttagttatgttccagaatgatagagacggaatctttgtatggcaaagttttgattatcctacagatactttaatccctggtatgaaagttgggatgaatcggaaaactgggctagaatgggttttaacatcttggaagtcaaagacgattactagctag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

186

Amino Acids

20.97

Weight (kDa)

4.98

Isoelectric Point (pI)

22.35

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000112)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g03320 FvH4_3g03322 FvH4_3g03323 FvH4_3g03340 FvH4_3g03350 FvH4_3g03351 FvH4_3g03370 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g06140 FvH4_6g00257 FvH4_6g00257 FvH4_6g00270 FvH4_6g00300 FvH4_6g20800 FvH4_6g20800 FvH4_6g20800 FvH4_6g20800 FvH4_6g20800
malus_domestica MD05G1232700.v1.1 MD05G1327700.v1.1 MD05G1327800.v1.1 MD05G1327900.v1.1 MD05G1328000.v1.1 MD05G1328200.v1.1 MD05G1328300.v1.1 MD05G1328500.v1.1 MD05G1332000.v1.1 MD05G1332100.v1.1 MD10G1307600.v1.1 MD10G1307800.v1.1
prunus_persica Prupe.4G031900_v2.0.a1 Prupe.4G032000_v2.0.a1 Prupe.4G032000_v2.0.a1 Prupe.4G032100_v2.0.a1 Prupe.4G032200_v2.0.a1 Prupe.4G032200_v2.0.a1 Prupe.4G032200_v2.0.a1
pyrus_communis pycom05g30180 pycom05g30190 pycom05g30200 pycom05g30210 pycom10g25920 pycom10g25930
rosa_chinensis RchiOBHm_Chr2g0130831 RchiOBHm_Chr2g0132531 RchiOBHm_Chr2g0132541 RchiOBHm_Chr3g0455681 RchiOBHm_Chr3g0476681 RchiOBHm_Chr3g0476761 RchiOBHm_Chr3g0476771 RchiOBHm_Chr3g0476791 RchiOBHm_Chr3g0476801 RchiOBHm_Chr3g0476811 RchiOBHm_Chr4g0413551 RchiOBHm_Chr4g0413561 RchiOBHm_Chr5g0002911 RchiOBHm_Chr5g0005071 RchiOBHm_Chr5g0005101 RchiOBHm_Chr5g0005111 RchiOBHm_Chr5g0005121 RchiOBHm_Chr5g0005131 RchiOBHm_Chr5g0005141 RchiOBHm_Chr5g0005161 RchiOBHm_Chr5g0005171 RchiOBHm_Chr5g0006341 RchiOBHm_Chr5g0046161 RchiOBHm_Chr5g0046171 RchiOBHm_Chr5g0046181 RchiOBHm_Chr5g0046221 RchiOBHm_Chr5g0046231 RchiOBHm_Chr7g0224061 RchiOBHm_Chr7g0224081 RchiOBHm_Chr7g0224101 RchiOBHm_Chr7g0224111 RchiOBHm_Chr7g0224121
rosa_laevigata RLG00000010193 RLG00000019146 RLG00000019148 RLG00000019149 RLG00000019150 RLG00000023750 RLG00000023751 RLG00000023753 RLG00000029486 RLG00000031068 RLG00000031069 RLG00000031284 RLG00000031285 RLG00000031286 RLG00000031289 RLG00000031290 RLG00000031291 RLG00000031292 RLG00000031293 RLG00000031294 RLG00000031295 RLG00000031296 RLG00000031297 RLG00000031363 RLG00000032618 RLG00000032619
rosa_multiflora Rmu_co8147584.1_g000001 Rmu_co8205828.1_g000001 Rmu_co8373645.1_g000001 Rmu_co8407679.1_g000001 Rmu_co8452561.1_g000001 Rmu_sc0001035.1_g000076 Rmu_sc0001884.1_g000026 Rmu_sc0001884.1_g000027 Rmu_sc0001884.1_g000035 Rmu_sc0002157.1_g000026 Rmu_sc0002399.1_g000006 Rmu_sc0002399.1_g000007 Rmu_sc0002883.1_g000010 Rmu_sc0003629.1_g000014 Rmu_sc0003884.1_g000004 Rmu_sc0007865.1_g000005 Rmu_sc0008085.1_g000013 Rmu_sc0008085.1_g000014 Rmu_sc0008085.1_g000016 Rmu_sc0008085.1_g000018 Rmu_sc0008432.1_g000004 Rmu_sc0008714.1_g000002 Rmu_sc0009296.1_g000008 Rmu_sc0009296.1_g000009 Rmu_sc0009296.1_g000011 Rmu_sc0010281.1_g000001 Rmu_sc0010281.1_g000002 Rmu_sc0010714.1_g000011 Rmu_sc0010714.1_g000016 Rmu_sc0011169.1_g000001 Rmu_sc0011169.1_g000007 Rmu_sc0013603.1_g000006 Rmu_sc0020478.1_g000003 Rmu_sc0020478.1_g000007 Rmu_sc0025106.1_g000012 Rmu_sc0032709.1_g000001 Rmu_sc0033028.1_g000001
rosa_roxburghii Rroxscaffold_1G00069570 Rroxscaffold_1G00069610 Rroxscaffold_1G00069620 Rroxscaffold_1G00070480 Rroxscaffold_1G00070490 Rroxscaffold_1G00070500 Rroxscaffold_1G00070510 Rroxscaffold_1G00070520 Rroxscaffold_1G00070530 Rroxscaffold_1G00070540 Rroxscaffold_1G00070550 Rroxscaffold_1G00070590 Rroxscaffold_1G00072950 Rroxscaffold_1G00073080 Rroxscaffold_2G00111810 Rroxscaffold_2G00111820 Rroxscaffold_2G00113530 Rroxscaffold_2G00113870 Rroxscaffold_6G00405010 Rroxscaffold_6G00405020 Rroxscaffold_6G00423590 Rroxscaffold_6G00424100
rosa_rugosa Rorug02G0293200 Rorug02G0293300 Rorug02G0293400 Rorug02G0305900 Rorug02G0305900 Rorug03G0009100 Rorug03G0157000 Rorug03G0157000 Rorug03G0304900 Rorug04G0400500 Rorug04G0415200 Rorug04G0415300 Rorug04G0415400 Rorug04G0415500 Rorug04G0421100 Rorug05G0068000 Rorug05G0068100 Rorug05G0068200 Rorug05G0068500 Rorug05G0224600 Rorug05G0224700
rosa_samantha Rh2CG331700 Rh2CG341600 Rh2CG341700 Rh2DG381200 Rh3DG071200 Rh3DG233400 Rh3DG233500 Rh3DG233600 Rh5AG043100 Rh5CG026000 Rh5CG047700 Rh5CG047800 Rh5CG047900 Rh5CG048000 Rh5CG048100 Rh5CG048300 Rh5CG056500 Rh5CG340500 Rh5CG340700 Rh5CG340800 Rh7AG365000
rosa_wichuraiana Rw0G002360 Rw0G002370 Rw0G012520 Rw0G018230 Rw0G019190 Rw2G027480 Rw2G029150 Rw3G005520 Rw3G005880 Rw3G005890 Rw3G018840 Rw3G018850 Rw3G018870 Rw3G018880 Rw3G020740 Rw5G002190 Rw5G004180 Rw5G004190 Rw5G004890 Rw5G013960 Rw5G014000 Rw5G028610 Rw7G030910 Rw7G030920

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 303
AciI CCGC 1 cut(s) 163
AclWI GGATC 1 cut(s) 227
AcsI RAATTY 1 cut(s) 151
AcuI CTGAAG 1 cut(s) 124
AfaI GTAC 1 cut(s) 381
AfiI CCNNNNNNNGG 1 cut(s) 273
AgsI TTSAA 1 cut(s) 10
AjnI CCWGG 3 cut(s) 50, 145, 478
AloI GAACNNNNNNTCC 2 cut(s) 273, 305
AluBI AGCT 3 cut(s) 123, 385, 558
AluI AGCT 3 cut(s) 123, 385, 558
Alw26I GTCTC 5 cut(s) 225, 276, 305, 345, 420
AlwI GGATC 1 cut(s) 227
ApeKI GCWGC 1 cut(s) 120
ApoI RAATTY 1 cut(s) 151
ArsI GACNNNNNNTTYG 2 cut(s) 419, 451
AsuHPI GGTGA 1 cut(s) 256
BbvI GCAGC 1 cut(s) 132
BccI CCATC 2 cut(s) 86, 248
BciT130I CCWGG 3 cut(s) 52, 147, 480
BciVI GTATCC 1 cut(s) 385
BcoDI GTCTC 5 cut(s) 225, 276, 305, 345, 420
BfaI CTAG 5 cut(s) 156, 287, 515, 555, 559
BfmI CTRYAG 2 cut(s) 330, 462
BfuI GTATCC 1 cut(s) 385
BisI GCNGC 1 cut(s) 121
BlsI GCNGC 1 cut(s) 122
Bme1390I CCNGG 3 cut(s) 52, 147, 480
BmrFI CCNGG 3 cut(s) 52, 147, 480
BmrI ACTGGG 1 cut(s) 519
BmsI GCATC 1 cut(s) 325
BmuI ACTGGG 1 cut(s) 519
BpmI CTGGAG 1 cut(s) 276
BpuEI CTTGAG 2 cut(s) 65, 82
BsaI GGTCTC 2 cut(s) 276, 305
BsaJI CCNNGG 3 cut(s) 51, 145, 478
BsaXI ACNNNNNCTCC 2 cut(s) 273, 303
Bsc4I CCNNNNNNNGG 1 cut(s) 273
Bse1I ACTGG 2 cut(s) 315, 514
BseBI CCWGG 3 cut(s) 52, 147, 480
BseDI CCNNGG 3 cut(s) 51, 145, 478
BseGI GGATG 2 cut(s) 91, 501
BseLI CCNNNNNNNGG 1 cut(s) 273
BseNI ACTGG 2 cut(s) 315, 514
BseRI GAGGAG 1 cut(s) 20
BseXI GCAGC 1 cut(s) 132
BslFI GGGAC 1 cut(s) 68
BslI CCNNNNNNNGG 1 cut(s) 273
BsmAI GTCTC 5 cut(s) 225, 276, 305, 345, 420
BsmBI CGTCTC 2 cut(s) 345, 420
BsmFI GGGAC 1 cut(s) 68
Bso31I GGTCTC 2 cut(s) 276, 305
Bsp1407I TGTACA 1 cut(s) 379
Bsp143I GATC 2 cut(s) 65, 219
BspACI CCGC 1 cut(s) 163
BspMAI CTGCAG 1 cut(s) 334
BspPI GGATC 1 cut(s) 227
BspTNI GGTCTC 2 cut(s) 276, 305
BsrGI TGTACA 1 cut(s) 379
BsrI ACTGG 2 cut(s) 315, 514
BssECI CCNNGG 3 cut(s) 51, 145, 478
BssMI GATC 2 cut(s) 65, 219
Bst2UI CCWGG 3 cut(s) 52, 147, 480
Bst4CI ACNGT 1 cut(s) 211
Bst6I CTCTTC 2 cut(s) 29, 38
BstAUI TGTACA 1 cut(s) 379
BstDEI CTNAG 1 cut(s) 403
BstF5I GGATG 2 cut(s) 91, 501
BstKTI GATC 2 cut(s) 68, 222
BstMAI GTCTC 5 cut(s) 225, 276, 305, 345, 420
BstMBI GATC 2 cut(s) 65, 219
BstNI CCWGG 3 cut(s) 52, 147, 480
BstSCI CCNGG 3 cut(s) 50, 145, 478
BstSFI CTRYAG 2 cut(s) 330, 462
BstV1I GCAGC 1 cut(s) 132
BsuI GTATCC 1 cut(s) 385
BtsCI GGATG 2 cut(s) 91, 501
BtsIMutI CAGTG 1 cut(s) 216
CseI GACGC 1 cut(s) 327
Csp6I GTAC 1 cut(s) 380
CviAII CATG 1 cut(s) 307
CviJI RGCY 5 cut(s) 123, 144, 385, 514, 558
CviKI_1 RGCY 5 cut(s) 123, 144, 385, 514, 558
CviQI GTAC 1 cut(s) 380
DdeI CTNAG 1 cut(s) 403
DpnI GATC 2 cut(s) 67, 221
DpnII GATC 2 cut(s) 65, 219
Eam1104I CTCTTC 2 cut(s) 29, 38
EarI CTCTTC 2 cut(s) 29, 38
Eco31I GGTCTC 2 cut(s) 276, 305
Eco57I CTGAAG 1 cut(s) 124
EcoRII CCWGG 3 cut(s) 50, 145, 478
Esp3I CGTCTC 2 cut(s) 345, 420
FaeI CATG 1 cut(s) 310
FaqI GGGAC 1 cut(s) 68
FatI CATG 1 cut(s) 306
FauNDI CATATG 1 cut(s) 376
Fnu4HI GCNGC 1 cut(s) 121
FokI GGATG 2 cut(s) 98, 508
Fsp4HI GCNGC 1 cut(s) 121
FspBI CTAG 5 cut(s) 156, 287, 515, 555, 559
GluI GCNGC 1 cut(s) 121
GsuI CTGGAG 1 cut(s) 276
HgaI GACGC 1 cut(s) 327
Hin1II CATG 1 cut(s) 310
HinfI GANTC 2 cut(s) 432, 499
HphI GGTGA 1 cut(s) 256
Hpy166II GTNNAC 1 cut(s) 98
Hpy188I TCNGA 2 cut(s) 202, 504
Hpy188III TCNNGA 2 cut(s) 255, 415
Hpy8I GTNNAC 1 cut(s) 98
HpyCH4III ACNGT 1 cut(s) 211
HpyCH4V TGCA 3 cut(s) 45, 332, 374
HpyF3I CTNAG 1 cut(s) 403
Hsp92II CATG 1 cut(s) 310
Kzo9I GATC 2 cut(s) 65, 219
Lsp1109I GCAGC 1 cut(s) 132
LweI GCATC 1 cut(s) 325
MaeI CTAG 5 cut(s) 156, 287, 515, 555, 559
MalI GATC 2 cut(s) 67, 221
MboI GATC 2 cut(s) 65, 219
MboII GAAGA 4 cut(s) 16, 25, 86, 130
MluCI AATT 1 cut(s) 151
MnlI CCTC 3 cut(s) 38, 41, 262
MseI TTAA 2 cut(s) 473, 527
MspR9I CCNGG 3 cut(s) 52, 147, 480
MvaI CCWGG 3 cut(s) 52, 147, 480
NdeI CATATG 1 cut(s) 376
NdeII GATC 2 cut(s) 65, 219
NlaIII CATG 1 cut(s) 310
PfeI GAWTC 2 cut(s) 432, 499
PkrI GCNGC 1 cut(s) 122
PsiI TTATAA 1 cut(s) 303
Psp6I CCWGG 3 cut(s) 50, 145, 478
PspGI CCWGG 3 cut(s) 50, 145, 478
PstI CTGCAG 1 cut(s) 334
RsaI GTAC 1 cut(s) 381
RsaNI GTAC 1 cut(s) 380
SaqAI TTAA 2 cut(s) 473, 527
SatI GCNGC 1 cut(s) 121
Sau3AI GATC 2 cut(s) 65, 219
ScrFI CCNGG 3 cut(s) 52, 147, 480
SetI ASST 8 cut(s) 62, 125, 254, 278, 288, 368, 387, 560
SfaNI GCATC 1 cut(s) 325
SfcI CTRYAG 2 cut(s) 330, 462
SmlI CTYRAG 2 cut(s) 61, 80
SmoI CTYRAG 2 cut(s) 61, 80
Sse9I AATT 1 cut(s) 151
SsiI CCGC 1 cut(s) 163
SspMI CTAG 5 cut(s) 156, 287, 515, 555, 559
StyD4I CCNGG 3 cut(s) 50, 145, 478
TaaI ACNGT 1 cut(s) 211
TaqI TCGA 1 cut(s) 68
TasI AATT 1 cut(s) 151
TatI WGTACW 1 cut(s) 379
TfiI GAWTC 2 cut(s) 432, 499
Tru1I TTAA 2 cut(s) 473, 527
Tru9I TTAA 2 cut(s) 473, 527
TscAI CASTG 1 cut(s) 216
TseI GCWGC 1 cut(s) 120
TspDTI ATGAA 2 cut(s) 500, 512
TspGWI ACGGA 1 cut(s) 444
TspRI CASTG 1 cut(s) 216
XapI RAATTY 1 cut(s) 151
XspI CTAG 5 cut(s) 156, 287, 515, 555, 559
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.