Rmu_sc0008714.1_g000002

serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0008714.1
OG0000112
Physical Location & Seq
Forward (+)
16812 .. 20009
3198 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0008714.1_g000002.1.cds

Sequence Viewer

Length: 2436 bp
atggttttgaaagctctgcttctcttcctcctctttcaattatgcacttccagggacaccatgagagggaacgaagaacaattgaaggatgttgatggtgactatttagtgtccaaagaaagcaagtttgaattgggtttcttcagccccggaaattctagctaccggtatgttggaatctggtattctcagactagagtatctaataaaacagtggtgtgggttgcaaacaggaacaatcctatcaatgatacctctggtgtgctcacaataaacaggtatggagaactagttctttatgctcataacatggaaagcactcctatttggtctactaacgtgtcgcggtcggttcaaaatgttaacacaagcacttcatctacacagcttttagatacaggaaatttagttgtgttccaggatgataaaaatggaatctttatatggcaaagttttgatcatcctatagatactttaattccaggtatgaaagttggggtgaattggaaaactgggcaagaatgggttttaacatcttggaagtcacaagatgaccctggaactggggactatacctataggctaagttcagatcataatgcatctccccaattttttttgtataaaggtttgagtaagtattggcgaagtgatccagggccagcgcctactttggtcgctaatcaagatgaaacttattttttcatgaatgaaaccaatgcaattacaagaataacagtgactgattctgccttagagcaccttatatgggatggtggtggctttcaatggaaggaagacttctctgcaccgaagtcccggtgtgacaggtacggacagtgtggtgccaacagcagatgtagccctgacaatgttaatctgtttgagtgtgactgtttgccagggtatgtgcctaattctgtaagtgattggaatcagaaaaatggttcaggtggatgtgtgagtaatcgacttggtttgttgaagtgtggagatggagacgggtttataaaggtggcaagagttaaatatccagacacaacgatagcagcatcgttaaaatcaggtatgagtgacaaagagtgtgcacaggagtgcctaagaaattgttcttgcactgcatatttgagcactgaaaatgaagggattgttgattgcttgacatggtatgatgacttgatggacattttagtgtacacagagcttggacgagatctctatgttcgtgtgaatgcaactgtgttagcggcaaatgccggaagatcacaaggtttcttggaaaggaggggtatgctggctattccaatactgtctactgcgctagcattggtactaatcattatgcttgcatggaagtggcataagaagaacaggaacacaagaggcatagactttgtggaggcagaggagcttgaggaaactcagagacaccccgaattgcaatttttcgatcttgacacaataatagcagccacagaccacttctctcgtgtcaatgaacttggccgtggtggctttggctctgtttataagggtcagctatcaaatgaacagaaagttgctgtgaaaagattgtccaaaacttcaggacaagggattgaagaatttaagaatgaagttgcacttatagcaagacttcaacataggaaccttgtgaaacttttaggctgttgtataaagggagaagaaaggatgttagtcctagaatacatgcctaacaaaggcttggactcctttctttttgataagacaagacggtccttcttggattgggaaaagcgttttgaaattatcaacgggattgctcgtgggattctgtatcttcaccaagactcaagattgaggattattcatagagatctaaaaactagtaatgttctactagatgatgagatgaacccaaaaatttctgattttggcatggctagaatattccatggagaccaactgcaagataagacgagccgaattgttggaacatatggctacatgtcaccagagtacgcagtatttgggagattttccacaaagtctgatgtctttagttttgggatcataatgttggagattgtaagtggccagaaaaacaatggttctgatctagaggattcttccgtgaacttaataggacgtgtatgggagctctggagagaaggcagagccttggatattgtggattcaacactgaagtcatatcatccaaatgaagccatgagatgcatacaagttgcgctcttgtgtgtacaagaagatccgaatgaccgacctgccatgtcagccattgttttcatgttgagtgatgaagcatctcctccattgccaaagcagccggcatctgtttacgaaagaaaattcggcactcatgttgatccattactttcaaacagatcttcttctataaatcacttgacagtaactacaatggaagctcgataa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
B_lectin DUF3403 PAN_2 Pkinase Pkinase_Tyr S_locus_glycop

Protein Analysis

811

Amino Acids

91.44

Weight (kDa)

5.75

Isoelectric Point (pI)

34.59

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000112)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g03320 FvH4_3g03322 FvH4_3g03323 FvH4_3g03340 FvH4_3g03350 FvH4_3g03351 FvH4_3g03370 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g06140 FvH4_6g00257 FvH4_6g00257 FvH4_6g00270 FvH4_6g00300 FvH4_6g20800 FvH4_6g20800 FvH4_6g20800 FvH4_6g20800 FvH4_6g20800
malus_domestica MD05G1232700.v1.1 MD05G1327700.v1.1 MD05G1327800.v1.1 MD05G1327900.v1.1 MD05G1328000.v1.1 MD05G1328200.v1.1 MD05G1328300.v1.1 MD05G1328500.v1.1 MD05G1332000.v1.1 MD05G1332100.v1.1 MD10G1307600.v1.1 MD10G1307800.v1.1
prunus_persica Prupe.4G031900_v2.0.a1 Prupe.4G032000_v2.0.a1 Prupe.4G032000_v2.0.a1 Prupe.4G032100_v2.0.a1 Prupe.4G032200_v2.0.a1 Prupe.4G032200_v2.0.a1 Prupe.4G032200_v2.0.a1
pyrus_communis pycom05g30180 pycom05g30190 pycom05g30200 pycom05g30210 pycom10g25920 pycom10g25930
rosa_chinensis RchiOBHm_Chr2g0130831 RchiOBHm_Chr2g0132531 RchiOBHm_Chr2g0132541 RchiOBHm_Chr3g0455681 RchiOBHm_Chr3g0476681 RchiOBHm_Chr3g0476761 RchiOBHm_Chr3g0476771 RchiOBHm_Chr3g0476791 RchiOBHm_Chr3g0476801 RchiOBHm_Chr3g0476811 RchiOBHm_Chr4g0413551 RchiOBHm_Chr4g0413561 RchiOBHm_Chr5g0002911 RchiOBHm_Chr5g0005071 RchiOBHm_Chr5g0005101 RchiOBHm_Chr5g0005111 RchiOBHm_Chr5g0005121 RchiOBHm_Chr5g0005131 RchiOBHm_Chr5g0005141 RchiOBHm_Chr5g0005161 RchiOBHm_Chr5g0005171 RchiOBHm_Chr5g0006341 RchiOBHm_Chr5g0046161 RchiOBHm_Chr5g0046171 RchiOBHm_Chr5g0046181 RchiOBHm_Chr5g0046221 RchiOBHm_Chr5g0046231 RchiOBHm_Chr7g0224061 RchiOBHm_Chr7g0224081 RchiOBHm_Chr7g0224101 RchiOBHm_Chr7g0224111 RchiOBHm_Chr7g0224121
rosa_laevigata RLG00000010193 RLG00000019146 RLG00000019148 RLG00000019149 RLG00000019150 RLG00000023750 RLG00000023751 RLG00000023753 RLG00000029486 RLG00000031068 RLG00000031069 RLG00000031284 RLG00000031285 RLG00000031286 RLG00000031289 RLG00000031290 RLG00000031291 RLG00000031292 RLG00000031293 RLG00000031294 RLG00000031295 RLG00000031296 RLG00000031297 RLG00000031363 RLG00000032618 RLG00000032619
rosa_multiflora Rmu_co8147584.1_g000001 Rmu_co8205828.1_g000001 Rmu_co8373645.1_g000001 Rmu_co8407679.1_g000001 Rmu_co8452561.1_g000001 Rmu_sc0001035.1_g000076 Rmu_sc0001884.1_g000026 Rmu_sc0001884.1_g000027 Rmu_sc0001884.1_g000035 Rmu_sc0002157.1_g000026 Rmu_sc0002399.1_g000006 Rmu_sc0002399.1_g000007 Rmu_sc0002883.1_g000010 Rmu_sc0003629.1_g000014 Rmu_sc0003884.1_g000004 Rmu_sc0007865.1_g000005 Rmu_sc0008085.1_g000013 Rmu_sc0008085.1_g000014 Rmu_sc0008085.1_g000016 Rmu_sc0008085.1_g000018 Rmu_sc0008432.1_g000004 Rmu_sc0008714.1_g000002 Rmu_sc0009296.1_g000008 Rmu_sc0009296.1_g000009 Rmu_sc0009296.1_g000011 Rmu_sc0010281.1_g000001 Rmu_sc0010281.1_g000002 Rmu_sc0010714.1_g000011 Rmu_sc0010714.1_g000016 Rmu_sc0011169.1_g000001 Rmu_sc0011169.1_g000007 Rmu_sc0013603.1_g000006 Rmu_sc0020478.1_g000003 Rmu_sc0020478.1_g000007 Rmu_sc0025106.1_g000012 Rmu_sc0032709.1_g000001 Rmu_sc0033028.1_g000001
rosa_roxburghii Rroxscaffold_1G00069570 Rroxscaffold_1G00069610 Rroxscaffold_1G00069620 Rroxscaffold_1G00070480 Rroxscaffold_1G00070490 Rroxscaffold_1G00070500 Rroxscaffold_1G00070510 Rroxscaffold_1G00070520 Rroxscaffold_1G00070530 Rroxscaffold_1G00070540 Rroxscaffold_1G00070550 Rroxscaffold_1G00070590 Rroxscaffold_1G00072950 Rroxscaffold_1G00073080 Rroxscaffold_2G00111810 Rroxscaffold_2G00111820 Rroxscaffold_2G00113530 Rroxscaffold_2G00113870 Rroxscaffold_6G00405010 Rroxscaffold_6G00405020 Rroxscaffold_6G00423590 Rroxscaffold_6G00424100
rosa_rugosa Rorug02G0293200 Rorug02G0293300 Rorug02G0293400 Rorug02G0305900 Rorug02G0305900 Rorug03G0009100 Rorug03G0157000 Rorug03G0157000 Rorug03G0304900 Rorug04G0400500 Rorug04G0415200 Rorug04G0415300 Rorug04G0415400 Rorug04G0415500 Rorug04G0421100 Rorug05G0068000 Rorug05G0068100 Rorug05G0068200 Rorug05G0068500 Rorug05G0224600 Rorug05G0224700
rosa_samantha Rh2CG331700 Rh2CG341600 Rh2CG341700 Rh2DG381200 Rh3DG071200 Rh3DG233400 Rh3DG233500 Rh3DG233600 Rh5AG043100 Rh5CG026000 Rh5CG047700 Rh5CG047800 Rh5CG047900 Rh5CG048000 Rh5CG048100 Rh5CG048300 Rh5CG056500 Rh5CG340500 Rh5CG340700 Rh5CG340800 Rh7AG365000
rosa_wichuraiana Rw0G002360 Rw0G002370 Rw0G012520 Rw0G018230 Rw0G019190 Rw2G027480 Rw2G029150 Rw3G005520 Rw3G005880 Rw3G005890 Rw3G018840 Rw3G018850 Rw3G018870 Rw3G018880 Rw3G020740 Rw5G002190 Rw5G004180 Rw5G004190 Rw5G004890 Rw5G013960 Rw5G014000 Rw5G028610 Rw7G030910 Rw7G030920

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1010, 1530
AasI GACNNNNNNGTC 1 cut(s) 1756
Acc36I ACCTGC 1 cut(s) 2275
AccB1I GGYRCC 1 cut(s) 845
AccI GTMKAC 2 cut(s) 332, 1313
AccII CGCG 1 cut(s) 346
AciI CCGC 2 cut(s) 346, 1247
AclWI GGATC 4 cut(s) 647, 2060, 2246, 2363
AcoI YGGCCR 2 cut(s) 1504, 2077
AcsI RAATTY 5 cut(s) 154, 403, 1604, 1905, 2351
AcuI CTGAAG 3 cut(s) 127, 1569, 2207
AfaI GTAC 5 cut(s) 833, 1196, 1332, 2003, 2244
AfiI CCNNNNNNNGG 4 cut(s) 66, 563, 769, 1721
AflIII ACRYGT 3 cut(s) 339, 1989, 2131
AgeI ACCGGT 1 cut(s) 165
AhlI ACTAGT 2 cut(s) 289, 1868
AjiI CACGTC 1 cut(s) 2132
AjnI CCWGG 6 cut(s) 50, 417, 481, 556, 655, 901
AleI CACNNNNGTG 1 cut(s) 1093
AloI GAACNNNNNNTCC 2 cut(s) 276, 308
AluBI AGCT 8 cut(s) 14, 162, 388, 1204, 1411, 1540, 2143, 2429
AluI AGCT 8 cut(s) 14, 162, 388, 1204, 1411, 1540, 2143, 2429
Alw21I GWGCWC 5 cut(s) 267, 762, 1090, 1133, 2145
Alw26I GTCTC 3 cut(s) 993, 1420, 1935
Alw44I GTGCAC 1 cut(s) 1086
AlwI GGATC 4 cut(s) 647, 2060, 2246, 2363
AlwNI CAGNNNCTG 1 cut(s) 743
AoxI GGCC 3 cut(s) 659, 1504, 2077
ApaLI GTGCAC 1 cut(s) 1086
ApeKI GCWGC 3 cut(s) 1049, 1469, 2326
ApoI RAATTY 5 cut(s) 154, 403, 1604, 1905, 2351
AsiGI ACCGGT 1 cut(s) 165
Asp700I GAANNNNTTC 2 cut(s) 291, 1108
AspLEI GCGC 3 cut(s) 667, 1321, 2233
AspS9I GGNCC 2 cut(s) 659, 1758
AsuC2I CCSGG 2 cut(s) 150, 820
AsuHPI GGTGA 4 cut(s) 110, 511, 1817, 1986
AsuNHI GCTAGC 1 cut(s) 1321
AvaII GGWCC 1 cut(s) 1758
BaeGI GKGCMC 1 cut(s) 1090
BaeI ACNNNNGTAYC 2 cut(s) 183, 216
BalI TGGCCA 1 cut(s) 2079
BanI GGYRCC 1 cut(s) 845
BanII GRGCYC 1 cut(s) 2145
BauI CACGAG 2 cut(s) 1488, 1806
BbsI GAAGAC 1 cut(s) 804
Bbv12I GWGCWC 5 cut(s) 267, 762, 1090, 1133, 2145
BbvI GCAGC 3 cut(s) 1061, 1481, 2338
BccI CCATC 4 cut(s) 89, 767, 989, 1174
BceAI ACGGC 1 cut(s) 1491
BciT130I CCWGG 6 cut(s) 52, 419, 483, 558, 657, 903
BclI TGATCA 1 cut(s) 457
BcnI CCSGG 2 cut(s) 150, 820
BcoDI GTCTC 3 cut(s) 993, 1420, 1935
BcuI ACTAGT 2 cut(s) 289, 1868
BfaI CTAG 9 cut(s) 159, 195, 290, 1322, 1703, 1869, 1883, 1926, 2102
BfmI CTRYAG 2 cut(s) 465, 577
BfoI RGCGCY 1 cut(s) 668
BfuAI ACCTGC 1 cut(s) 2275
BglI GCCNNNNNGGC 1 cut(s) 1512
BglII AGATCT 3 cut(s) 1213, 1858, 2387
BisI GCNGC 4 cut(s) 1050, 1248, 1470, 2327
BlsI GCNGC 4 cut(s) 1051, 1249, 1471, 2328
Bme1390I CCNGG 8 cut(s) 52, 150, 419, 483, 558, 657, 820, 903
Bme18I GGWCC 1 cut(s) 1758
BmgBI CACGTC 1 cut(s) 2132
BmgT120I GGNCC 2 cut(s) 659, 1758
BmiI GGNNCC 2 cut(s) 847, 1649
BmrFI CCNGG 8 cut(s) 52, 150, 419, 483, 558, 657, 820, 903
BmrI ACTGGG 2 cut(s) 522, 573
BmsI GCATC 5 cut(s) 611, 1061, 2207, 2315, 2342
BmtI GCTAGC 1 cut(s) 1325
BmuI ACTGGG 2 cut(s) 522, 573
BpiI GAAGAC 1 cut(s) 804
BpmI CTGGAG 1 cut(s) 2167
BpuEI CTTGAG 2 cut(s) 1433, 1819
BpuMI CCSGG 2 cut(s) 150, 820
BsaBI GATNNNNATC 1 cut(s) 933
BsaI GGTCTC 1 cut(s) 1935
BsaJI CCNNGG 8 cut(s) 51, 148, 556, 656, 902, 1507, 1936, 2163
BsaWI WCCGGW 1 cut(s) 165
BsaXI ACNNNNNCTCC 2 cut(s) 276, 306
Bsc4I CCNNNNNNNGG 4 cut(s) 66, 563, 769, 1721
Bse118I RCCGGY 2 cut(s) 165, 2329
Bse1I ACTGG 2 cut(s) 517, 568
Bse3DI GCAATG 1 cut(s) 2315
Bse8I GATNNNNATC 1 cut(s) 933
BseBI CCWGG 6 cut(s) 52, 419, 483, 558, 657, 903
BseDI CCNNGG 8 cut(s) 51, 148, 556, 656, 902, 1507, 1936, 2163
BseGI GGATG 7 cut(s) 94, 427, 460, 778, 962, 1698, 2197
BseJI GATNNNNATC 1 cut(s) 933
BseLI CCNNNNNNNGG 4 cut(s) 66, 563, 769, 1721
BseMI GCAATG 1 cut(s) 2315
BseMII CTCAG 2 cut(s) 203, 1436
BseNI ACTGG 2 cut(s) 517, 568
BseRI GAGGAG 3 cut(s) 20, 1421, 2301
BseSI GKGCMC 1 cut(s) 1090
BseXI GCAGC 3 cut(s) 1061, 1481, 2338
BsgI GTGCAG 1 cut(s) 792
Bsh1236I CGCG 1 cut(s) 346
Bsh1285I CGRYCG 1 cut(s) 350
BshFI GGCC 3 cut(s) 661, 1506, 2079
BshNI GGYRCC 1 cut(s) 845
BshTI ACCGGT 1 cut(s) 165
BsiEI CGRYCG 1 cut(s) 350
BsiHKAI GWGCWC 5 cut(s) 267, 762, 1090, 1133, 2145
BsiSI CCGG 5 cut(s) 150, 166, 820, 1257, 2330
BslFI GGGAC 3 cut(s) 68, 581, 802
BslI CCNNNNNNNGG 4 cut(s) 66, 563, 769, 1721
BsmAI GTCTC 3 cut(s) 993, 1420, 1935
BsmBI CGTCTC 1 cut(s) 993
BsmFI GGGAC 3 cut(s) 68, 581, 802
BsmI GAATGC 1 cut(s) 1237
BsnI GGCC 3 cut(s) 661, 1506, 2079
Bso31I GGTCTC 1 cut(s) 1935
Bsp1286I GDGCHC 5 cut(s) 267, 762, 1090, 1133, 2145
Bsp1407I TGTACA 2 cut(s) 1194, 2242
Bsp19I CCATGG 1 cut(s) 1936
BspACI CCGC 2 cut(s) 346, 1247
BspANI GGCC 3 cut(s) 661, 1506, 2079
BspCNI CTCAG 2 cut(s) 202, 1435
BspFNI CGCG 1 cut(s) 346
BspHI TCATGA 1 cut(s) 705
BspLI GGNNCC 2 cut(s) 847, 1649
BspMI ACCTGC 1 cut(s) 2275
BspOI GCTAGC 1 cut(s) 1325
BspPI GGATC 4 cut(s) 647, 2060, 2246, 2363
BspT107I GGYRCC 1 cut(s) 845
BspTNI GGTCTC 1 cut(s) 1935
BsrDI GCAATG 1 cut(s) 2315
BsrFI RCCGGY 2 cut(s) 165, 2329
BsrGI TGTACA 2 cut(s) 1194, 2242
BsrI ACTGG 2 cut(s) 517, 568
BssAI RCCGGY 2 cut(s) 165, 2329
BssECI CCNNGG 8 cut(s) 51, 148, 556, 656, 902, 1507, 1936, 2163
BssSI CACGAG 2 cut(s) 1488, 1806
BssT1I CCWWGG 2 cut(s) 1936, 2163
Bst2BI CACGAG 2 cut(s) 1488, 1806
Bst2UI CCWGG 6 cut(s) 52, 419, 483, 558, 657, 903
Bst4CI ACNGT 8 cut(s) 214, 739, 840, 896, 1240, 1311, 1758, 2413
Bst6I CTCTTC 1 cut(s) 29
BstAUI TGTACA 2 cut(s) 1194, 2242
BstC8I GCNNGC 5 cut(s) 663, 1296, 1323, 1347, 2331
BstDEI CTNAG 5 cut(s) 189, 584, 754, 1100, 1422
BstDSI CCRYGG 2 cut(s) 1507, 1936
BstENI CCTNNNNNAGG 1 cut(s) 1719
BstF5I GGATG 7 cut(s) 94, 427, 460, 778, 962, 1698, 2197
BstFNI CGCG 1 cut(s) 346
BstH2I RGCGCY 1 cut(s) 668
BstHHI GCGC 3 cut(s) 667, 1321, 2233
BstMAI GTCTC 3 cut(s) 993, 1420, 1935
BstMCI CGRYCG 1 cut(s) 350
BstMWI GCNNNNNNNGC 6 cut(s) 861, 1253, 1512, 1628, 2276, 2326
BstNI CCWGG 6 cut(s) 52, 419, 483, 558, 657, 903
BstNSI RCATGY 2 cut(s) 1714, 1993
BstSCI CCNGG 8 cut(s) 50, 148, 417, 481, 556, 655, 818, 901
BstSFI CTRYAG 2 cut(s) 465, 577
BstSLI GKGCMC 1 cut(s) 1090
BstUI CGCG 1 cut(s) 346
BstV1I GCAGC 3 cut(s) 1061, 1481, 2338
BstV2I GAAGAC 1 cut(s) 804
BstX2I RGATCY 4 cut(s) 1213, 1858, 2251, 2387
BstYI RGATCY 4 cut(s) 1213, 1858, 2251, 2387
BsuRI GGCC 3 cut(s) 661, 1506, 2079
BtgI CCRYGG 2 cut(s) 1507, 1936
BtrI CACGTC 1 cut(s) 2132
BtsCI GGATG 7 cut(s) 94, 427, 460, 778, 962, 1698, 2197
BtsI GCAGTG 1 cut(s) 1116
BtsIMutI CAGTG 6 cut(s) 219, 744, 845, 1116, 1131, 2183
BveI ACCTGC 1 cut(s) 2275
Cac8I GCNNGC 5 cut(s) 663, 1296, 1323, 1347, 2331
CaiI CAGNNNCTG 1 cut(s) 743
CciI TCATGA 1 cut(s) 705
CfoI GCGC 3 cut(s) 667, 1321, 2233
Cfr10I RCCGGY 2 cut(s) 165, 2329
Cfr13I GGNCC 2 cut(s) 659, 1758
Csp6I GTAC 5 cut(s) 832, 1195, 1331, 2002, 2243
CspAI ACCGGT 1 cut(s) 165
CviQI GTAC 5 cut(s) 832, 1195, 1331, 2002, 2243
DdeI CTNAG 5 cut(s) 189, 584, 754, 1100, 1422
DrdI GACNNNNNNGTC 1 cut(s) 1756
DseDI GACNNNNNNGTC 1 cut(s) 1756
EaeI YGGCCR 2 cut(s) 1504, 2077
Eam1104I CTCTTC 1 cut(s) 29
EarI CTCTTC 1 cut(s) 29
Ecl136II GAGCTC 1 cut(s) 2143
Eco130I CCWWGG 2 cut(s) 1936, 2163
Eco24I GRGCYC 1 cut(s) 2145
Eco31I GGTCTC 1 cut(s) 1935
Eco47I GGWCC 1 cut(s) 1758
Eco53kI GAGCTC 1 cut(s) 2143
Eco57I CTGAAG 3 cut(s) 127, 1569, 2207
EcoICRI GAGCTC 1 cut(s) 2143
EcoNI CCTNNNNNAGG 1 cut(s) 1719
EcoRII CCWGG 6 cut(s) 50, 417, 481, 556, 655, 901
EcoT14I CCWWGG 2 cut(s) 1936, 2163
EcoT22I ATGCAT 2 cut(s) 604, 2222
EcoT38I GRGCYC 1 cut(s) 2145
ErhI CCWWGG 2 cut(s) 1936, 2163
Esp3I CGTCTC 1 cut(s) 993
FalI AAGNNNNNCTT 5 cut(s) 35, 785, 817, 1608, 1640
FaqI GGGAC 3 cut(s) 68, 581, 802
FauNDI CATATG 1 cut(s) 1981
FbaI TGATCA 1 cut(s) 457
FblI GTMKAC 2 cut(s) 332, 1313
Fnu4HI GCNGC 4 cut(s) 1050, 1248, 1470, 2327
FokI GGATG 7 cut(s) 101, 434, 447, 785, 969, 1705, 2184
FriOI GRGCYC 1 cut(s) 2145
Fsp4HI GCNGC 4 cut(s) 1050, 1248, 1470, 2327
FspBI CTAG 9 cut(s) 159, 195, 290, 1322, 1703, 1869, 1883, 1926, 2102
GlaI GCGC 3 cut(s) 666, 1320, 2232
GluI GCNGC 4 cut(s) 1050, 1248, 1470, 2327
GsuI CTGGAG 1 cut(s) 2167
HaeII RGCGCY 1 cut(s) 668
HaeIII GGCC 3 cut(s) 661, 1506, 2079
HapII CCGG 5 cut(s) 150, 166, 820, 1257, 2330
HhaI GCGC 3 cut(s) 667, 1321, 2233
Hin6I GCGC 3 cut(s) 665, 1319, 2231
HinP1I GCGC 3 cut(s) 665, 1319, 2231
HincII GTYRAC 1 cut(s) 364
HindII GTYRAC 1 cut(s) 364
HinfI GANTC 9 cut(s) 177, 435, 746, 934, 1730, 1813, 1832, 2108, 2177
HpaI GTTAAC 1 cut(s) 364
HpaII CCGG 5 cut(s) 150, 166, 820, 1257, 2330
HphI GGTGA 4 cut(s) 110, 511, 1817, 1986
Hpy166II GTNNAC 9 cut(s) 333, 364, 1088, 1195, 1197, 1314, 2119, 2243, 2341
Hpy188I TCNGA 8 cut(s) 192, 592, 939, 1425, 1912, 2035, 2098, 2256
Hpy188III TCNNGA 8 cut(s) 686, 706, 1034, 1454, 1587, 1836, 2102, 2146
Hpy8I GTNNAC 9 cut(s) 333, 364, 1088, 1195, 1197, 1314, 2119, 2243, 2341
HpyAV CCTTC 5 cut(s) 79, 787, 1136, 1771, 2147
HpyCH4III ACNGT 8 cut(s) 214, 739, 840, 896, 1240, 1311, 1758, 2413
HpyCH4IV ACGT 2 cut(s) 339, 2131
HpyF10VI GCNNNNNNNGC 6 cut(s) 861, 1253, 1512, 1628, 2276, 2326
HpyF3I CTNAG 5 cut(s) 189, 584, 754, 1100, 1422
HpySE526I ACGT 2 cut(s) 339, 2131
HspAI GCGC 3 cut(s) 665, 1319, 2231
KroI GCCGGC 1 cut(s) 2329
KroNI GCCGGC 1 cut(s) 2331
Ksp22I TGATCA 1 cut(s) 457
KspAI GTTAAC 1 cut(s) 364
LmnI GCTCC 2 cut(s) 1408, 2140
Lsp1109I GCAGC 3 cut(s) 1061, 1481, 2338
LweI GCATC 5 cut(s) 611, 1061, 2207, 2315, 2342
MaeI CTAG 9 cut(s) 159, 195, 290, 1322, 1703, 1869, 1883, 1926, 2102
MaeII ACGT 2 cut(s) 339, 2131
MaeIII GTNAC 8 cut(s) 98, 543, 739, 824, 890, 1073, 1992, 2413
MfeI CAATTG 1 cut(s) 80
MflI RGATCY 4 cut(s) 1213, 1858, 2251, 2387
MhlI GDGCHC 5 cut(s) 267, 762, 1090, 1133, 2145
MlsI TGGCCA 1 cut(s) 2079
MluNI TGGCCA 1 cut(s) 2079
MlyI GAGTC 2 cut(s) 1724, 1826
MmeI TCCRAC 3 cut(s) 154, 1954, 2043
Mox20I TGGCCA 1 cut(s) 2079
Mph1103I ATGCAT 2 cut(s) 604, 2222
MroNI GCCGGC 1 cut(s) 2329
MroXI GAANNNNTTC 2 cut(s) 291, 1108
MscI TGGCCA 1 cut(s) 2079
MseI TTAA 8 cut(s) 363, 476, 530, 876, 1026, 1058, 1608, 2123
MslI CAYNNNNRTG 4 cut(s) 1093, 1190, 1354, 2202
Msp20I TGGCCA 1 cut(s) 2079
MspI CCGG 5 cut(s) 150, 166, 820, 1257, 2330
MspR9I CCNGG 8 cut(s) 52, 150, 419, 483, 558, 657, 820, 903
MunI CAATTG 1 cut(s) 80
Mva1269I GAATGC 1 cut(s) 1237
MvaI CCWGG 6 cut(s) 52, 419, 483, 558, 657, 903
MvnI CGCG 1 cut(s) 346
MwoI GCNNNNNNNGC 6 cut(s) 861, 1253, 1512, 1628, 2276, 2326
NaeI GCCGGC 1 cut(s) 2331
NciI CCSGG 2 cut(s) 150, 820
NcoI CCATGG 1 cut(s) 1936
NdeI CATATG 1 cut(s) 1981
NgoMIV GCCGGC 1 cut(s) 2329
NheI GCTAGC 1 cut(s) 1321
NlaIV GGNNCC 2 cut(s) 847, 1649
NmuCI GTSAC 7 cut(s) 98, 543, 739, 824, 890, 1073, 1992
NsiI ATGCAT 2 cut(s) 604, 2222
NspI RCATGY 2 cut(s) 1714, 1993
OliI CACNNNNGTG 1 cut(s) 1093
PagI TCATGA 1 cut(s) 705
PciI ACATGT 1 cut(s) 1989
PctI GAATGC 1 cut(s) 1237
PdiI GCCGGC 1 cut(s) 2331
PdmI GAANNNNTTC 2 cut(s) 291, 1108
PfeI GAWTC 7 cut(s) 177, 435, 746, 934, 1813, 2108, 2177
PfoI TCCNGGA 1 cut(s) 417
PinAI ACCGGT 1 cut(s) 165
PkrI GCNGC 4 cut(s) 1051, 1249, 1471, 2328
PleI GAGTC 2 cut(s) 1724, 1826
PpsI GAGTC 2 cut(s) 1724, 1826
PscI ACATGT 1 cut(s) 1989
PsiI TTATAA 2 cut(s) 1010, 1530
Psp124BI GAGCTC 1 cut(s) 2145
Psp6I CCWGG 6 cut(s) 50, 417, 481, 556, 655, 901
PspGI CCWGG 6 cut(s) 50, 417, 481, 556, 655, 901
PspN4I GGNNCC 2 cut(s) 847, 1649
PspPI GGNCC 2 cut(s) 659, 1758
PstNI CAGNNNCTG 1 cut(s) 743
PsuI RGATCY 4 cut(s) 1213, 1858, 2251, 2387
RsaI GTAC 5 cut(s) 833, 1196, 1332, 2003, 2244
RsaNI GTAC 5 cut(s) 832, 1195, 1331, 2002, 2243
RseI CAYNNNNRTG 4 cut(s) 1093, 1190, 1354, 2202
SacI GAGCTC 1 cut(s) 2145
SaqAI TTAA 8 cut(s) 363, 476, 530, 876, 1026, 1058, 1608, 2123
SatI GCNGC 4 cut(s) 1050, 1248, 1470, 2327
Sau96I GGNCC 2 cut(s) 659, 1758
SchI GAGTC 2 cut(s) 1724, 1826
ScrFI CCNGG 8 cut(s) 52, 150, 419, 483, 558, 657, 820, 903
SduI GDGCHC 5 cut(s) 267, 762, 1090, 1133, 2145
SfaNI GCATC 5 cut(s) 611, 1061, 2207, 2315, 2342
SfcI CTRYAG 2 cut(s) 465, 577
SinI GGWCC 1 cut(s) 1758
SmiMI CAYNNNNRTG 4 cut(s) 1093, 1190, 1354, 2202
SmlI CTYRAG 2 cut(s) 1412, 1834
SmoI CTYRAG 2 cut(s) 1412, 1834
SpeI ACTAGT 2 cut(s) 289, 1868
SsiI CCGC 2 cut(s) 346, 1247
SspI AATATT 1 cut(s) 1932
SspMI CTAG 9 cut(s) 159, 195, 290, 1322, 1703, 1869, 1883, 1926, 2102
SstI GAGCTC 1 cut(s) 2145
StyD4I CCNGG 8 cut(s) 50, 148, 417, 481, 556, 655, 818, 901
StyI CCWWGG 2 cut(s) 1936, 2163
TaaI ACNGT 8 cut(s) 214, 739, 840, 896, 1240, 1311, 1758, 2413
TaiI ACGT 2 cut(s) 342, 2134
TaqI TCGA 3 cut(s) 970, 1449, 2431
TaqII GACCGA 1 cut(s) 2277
TatI WGTACW 2 cut(s) 1194, 2242
TauI GCSGC 1 cut(s) 1250
TfiI GAWTC 7 cut(s) 177, 435, 746, 934, 1813, 2108, 2177
Tru1I TTAA 8 cut(s) 363, 476, 530, 876, 1026, 1058, 1608, 2123
Tru9I TTAA 8 cut(s) 363, 476, 530, 876, 1026, 1058, 1608, 2123
TscAI CASTG 6 cut(s) 219, 744, 845, 1123, 1138, 2190
TseFI GTSAC 7 cut(s) 98, 543, 739, 824, 890, 1073, 1992
TseI GCWGC 3 cut(s) 1049, 1469, 2326
Tsp45I GTSAC 7 cut(s) 98, 543, 739, 824, 890, 1073, 1992
TspGWI ACGGA 2 cut(s) 849, 2104
TspRI CASTG 6 cut(s) 219, 744, 845, 1123, 1138, 2190
VneI GTGCAC 1 cut(s) 1086
VpaK11BI GGWCC 1 cut(s) 1758
XagI CCTNNNNNAGG 1 cut(s) 1719
XapI RAATTY 5 cut(s) 154, 403, 1604, 1905, 2351
XbaI TCTAGA 1 cut(s) 2101
XceI RCATGY 2 cut(s) 1714, 1993
XcmI CCANNNNNNNNNTGG 1 cut(s) 2087
XmiI GTMKAC 2 cut(s) 332, 1313
XmnI GAANNNNTTC 2 cut(s) 291, 1108
XspI CTAG 9 cut(s) 159, 195, 290, 1322, 1703, 1869, 1883, 1926, 2102
Zsp2I ATGCAT 2 cut(s) 604, 2222
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.