RchiOBHm_Chr7g0224101

serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
Physical Location & Seq
Forward (+)
45980458 .. 45981069
612 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ20065

Sequence Viewer

Length: 612 bp
ATGTTATTCAAAGCTCTGCTTCTCTTCCTCCTCTTCCGATTTTGCGAATCCAGGGACACCATAACACGGAACCAAGAACAACTGAAGGATGATGGTGGAGTTTTAGTGTCCAAACAGAGCAAGTTCGAATTGGGTTTCTTCAGCCCCGGAAATTCTAGCAACCGGTATGTTGGAATTTGGTATTCTCAGACTAGAGTATCTAATAAAACAGTGGTGTGGGTTGCAAACAGGAACAATCCCATAAATGATACCTCTGGTGTGCTCACAATAAACAGGTATGGAGAACTAGTCCTTTATGCTTATAACATGGAGAGCACTCCTATTTGGTCTACTAATGTGTCGCGGTCGGTTCAAAATGTTAACACAAGCACTTTATCTGCACAGCTTTTAGATACAGGAAATCTAGTTGTGTTCCAGGATGATAATAATGAAAACCTTTCATGGCAAAGTTTTGATCATCCCACAGATACTTTAATTCCAGGTATGAAAGTTGGGGTGAATTGGAAAACTGGGCAAGAATGGGTTTTAACATCTTGGAAGTCACAAGATGACCCTGCAATTGGGGACTATGTAAGATCAAATATGGACATAACACATATCATCATAAAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

203

Amino Acids

23.1

Weight (kDa)

5.67

Isoelectric Point (pI)

27.74

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 70 - 180 3.9e-37 D-mannose binding lectin
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000112)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g03320 FvH4_3g03322 FvH4_3g03323 FvH4_3g03340 FvH4_3g03350 FvH4_3g03351 FvH4_3g03370 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g06140 FvH4_6g00257 FvH4_6g00257 FvH4_6g00270 FvH4_6g00300 FvH4_6g20800 FvH4_6g20800 FvH4_6g20800 FvH4_6g20800 FvH4_6g20800
malus_domestica MD05G1232700.v1.1 MD05G1327700.v1.1 MD05G1327800.v1.1 MD05G1327900.v1.1 MD05G1328000.v1.1 MD05G1328200.v1.1 MD05G1328300.v1.1 MD05G1328500.v1.1 MD05G1332000.v1.1 MD05G1332100.v1.1 MD10G1307600.v1.1 MD10G1307800.v1.1
prunus_persica Prupe.4G031900_v2.0.a1 Prupe.4G032000_v2.0.a1 Prupe.4G032000_v2.0.a1 Prupe.4G032100_v2.0.a1 Prupe.4G032200_v2.0.a1 Prupe.4G032200_v2.0.a1 Prupe.4G032200_v2.0.a1
pyrus_communis pycom05g30180 pycom05g30190 pycom05g30200 pycom05g30210 pycom10g25920 pycom10g25930
rosa_chinensis RchiOBHm_Chr2g0130831 RchiOBHm_Chr2g0132531 RchiOBHm_Chr2g0132541 RchiOBHm_Chr3g0455681 RchiOBHm_Chr3g0476681 RchiOBHm_Chr3g0476761 RchiOBHm_Chr3g0476771 RchiOBHm_Chr3g0476791 RchiOBHm_Chr3g0476801 RchiOBHm_Chr3g0476811 RchiOBHm_Chr4g0413551 RchiOBHm_Chr4g0413561 RchiOBHm_Chr5g0002911 RchiOBHm_Chr5g0005071 RchiOBHm_Chr5g0005101 RchiOBHm_Chr5g0005111 RchiOBHm_Chr5g0005121 RchiOBHm_Chr5g0005131 RchiOBHm_Chr5g0005141 RchiOBHm_Chr5g0005161 RchiOBHm_Chr5g0005171 RchiOBHm_Chr5g0006341 RchiOBHm_Chr5g0046161 RchiOBHm_Chr5g0046171 RchiOBHm_Chr5g0046181 RchiOBHm_Chr5g0046221 RchiOBHm_Chr5g0046231 RchiOBHm_Chr7g0224061 RchiOBHm_Chr7g0224081 RchiOBHm_Chr7g0224101 RchiOBHm_Chr7g0224111 RchiOBHm_Chr7g0224121
rosa_laevigata RLG00000010193 RLG00000019146 RLG00000019148 RLG00000019149 RLG00000019150 RLG00000023750 RLG00000023751 RLG00000023753 RLG00000029486 RLG00000031068 RLG00000031069 RLG00000031284 RLG00000031285 RLG00000031286 RLG00000031289 RLG00000031290 RLG00000031291 RLG00000031292 RLG00000031293 RLG00000031294 RLG00000031295 RLG00000031296 RLG00000031297 RLG00000031363 RLG00000032618 RLG00000032619
rosa_multiflora Rmu_co8147584.1_g000001 Rmu_co8205828.1_g000001 Rmu_co8373645.1_g000001 Rmu_co8407679.1_g000001 Rmu_co8452561.1_g000001 Rmu_sc0001035.1_g000076 Rmu_sc0001884.1_g000026 Rmu_sc0001884.1_g000027 Rmu_sc0001884.1_g000035 Rmu_sc0002157.1_g000026 Rmu_sc0002399.1_g000006 Rmu_sc0002399.1_g000007 Rmu_sc0002883.1_g000010 Rmu_sc0003629.1_g000014 Rmu_sc0003884.1_g000004 Rmu_sc0007865.1_g000005 Rmu_sc0008085.1_g000013 Rmu_sc0008085.1_g000014 Rmu_sc0008085.1_g000016 Rmu_sc0008085.1_g000018 Rmu_sc0008432.1_g000004 Rmu_sc0008714.1_g000002 Rmu_sc0009296.1_g000008 Rmu_sc0009296.1_g000009 Rmu_sc0009296.1_g000011 Rmu_sc0010281.1_g000001 Rmu_sc0010281.1_g000002 Rmu_sc0010714.1_g000011 Rmu_sc0010714.1_g000016 Rmu_sc0011169.1_g000001 Rmu_sc0011169.1_g000007 Rmu_sc0013603.1_g000006 Rmu_sc0020478.1_g000003 Rmu_sc0020478.1_g000007 Rmu_sc0025106.1_g000012 Rmu_sc0032709.1_g000001 Rmu_sc0033028.1_g000001
rosa_roxburghii Rroxscaffold_1G00069570 Rroxscaffold_1G00069610 Rroxscaffold_1G00069620 Rroxscaffold_1G00070480 Rroxscaffold_1G00070490 Rroxscaffold_1G00070500 Rroxscaffold_1G00070510 Rroxscaffold_1G00070520 Rroxscaffold_1G00070530 Rroxscaffold_1G00070540 Rroxscaffold_1G00070550 Rroxscaffold_1G00070590 Rroxscaffold_1G00072950 Rroxscaffold_1G00073080 Rroxscaffold_2G00111810 Rroxscaffold_2G00111820 Rroxscaffold_2G00113530 Rroxscaffold_2G00113870 Rroxscaffold_6G00405010 Rroxscaffold_6G00405020 Rroxscaffold_6G00423590 Rroxscaffold_6G00424100
rosa_rugosa Rorug02G0293200 Rorug02G0293300 Rorug02G0293400 Rorug02G0305900 Rorug02G0305900 Rorug03G0009100 Rorug03G0157000 Rorug03G0157000 Rorug03G0304900 Rorug04G0400500 Rorug04G0415200 Rorug04G0415300 Rorug04G0415400 Rorug04G0415500 Rorug04G0421100 Rorug05G0068000 Rorug05G0068100 Rorug05G0068200 Rorug05G0068500 Rorug05G0224600 Rorug05G0224700
rosa_samantha Rh2CG331700 Rh2CG341600 Rh2CG341700 Rh2DG381200 Rh3DG071200 Rh3DG233400 Rh3DG233500 Rh3DG233600 Rh5AG043100 Rh5CG026000 Rh5CG047700 Rh5CG047800 Rh5CG047900 Rh5CG048000 Rh5CG048100 Rh5CG048300 Rh5CG056500 Rh5CG340500 Rh5CG340700 Rh5CG340800 Rh7AG365000
rosa_wichuraiana Rw0G002360 Rw0G002370 Rw0G012520 Rw0G018230 Rw0G019190 Rw2G027480 Rw2G029150 Rw3G005520 Rw3G005880 Rw3G005890 Rw3G018840 Rw3G018850 Rw3G018870 Rw3G018880 Rw3G020740 Rw5G002190 Rw5G004180 Rw5G004190 Rw5G004890 Rw5G013960 Rw5G014000 Rw5G028610 Rw7G030910 Rw7G030920

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 303
AccI GTMKAC 1 cut(s) 329
AccII CGCG 1 cut(s) 343
AciI CCGC 1 cut(s) 343
AcsI RAATTY 2 cut(s) 151, 174
AcuI CTGAAG 2 cut(s) 104, 124
AfiI CCNNNNNNNGG 2 cut(s) 66, 560
AgeI ACCGGT 1 cut(s) 162
AgsI TTSAA 2 cut(s) 10, 353
AhlI ACTAGT 1 cut(s) 286
AjnI CCWGG 3 cut(s) 50, 414, 478
AluBI AGCT 2 cut(s) 14, 385
AluI AGCT 2 cut(s) 14, 385
Alw21I GWGCWC 2 cut(s) 264, 317
ApoI RAATTY 2 cut(s) 151, 174
AsiGI ACCGGT 1 cut(s) 162
AsuC2I CCSGG 1 cut(s) 147
AsuHPI GGTGA 1 cut(s) 508
AsuII TTCGAA 1 cut(s) 126
BaeI ACNNNNGTAYC 2 cut(s) 180, 213
Bbv12I GWGCWC 2 cut(s) 264, 317
BccI CCATC 1 cut(s) 86
BciT130I CCWGG 3 cut(s) 52, 416, 480
BclI TGATCA 1 cut(s) 454
BcnI CCSGG 1 cut(s) 147
BcuI ACTAGT 1 cut(s) 286
BfaI CTAG 4 cut(s) 156, 192, 287, 404
Bme1390I CCNGG 4 cut(s) 52, 147, 416, 480
BmiI GGNNCC 1 cut(s) 71
BmrFI CCNGG 4 cut(s) 52, 147, 416, 480
BmrI ACTGGG 1 cut(s) 519
BmuI ACTGGG 1 cut(s) 519
Bpu14I TTCGAA 1 cut(s) 126
BpuMI CCSGG 1 cut(s) 147
BsaJI CCNNGG 2 cut(s) 51, 145
BsaWI WCCGGW 1 cut(s) 162
BsaXI ACNNNNNCTCC 4 cut(s) 90, 120, 273, 303
Bsc4I CCNNNNNNNGG 2 cut(s) 66, 560
Bse118I RCCGGY 1 cut(s) 162
Bse1I ACTGG 1 cut(s) 514
BseBI CCWGG 3 cut(s) 52, 416, 480
BseDI CCNNGG 2 cut(s) 51, 145
BseGI GGATG 3 cut(s) 94, 424, 457
BseLI CCNNNNNNNGG 2 cut(s) 66, 560
BseMII CTCAG 1 cut(s) 200
BseNI ACTGG 1 cut(s) 514
BseRI GAGGAG 1 cut(s) 20
BsgI GTGCAG 1 cut(s) 363
Bsh1236I CGCG 1 cut(s) 343
Bsh1285I CGRYCG 1 cut(s) 347
BshTI ACCGGT 1 cut(s) 162
BsiEI CGRYCG 1 cut(s) 347
BsiHKAI GWGCWC 2 cut(s) 264, 317
BsiSI CCGG 2 cut(s) 147, 163
BslFI GGGAC 2 cut(s) 68, 578
BslI CCNNNNNNNGG 2 cut(s) 66, 560
BsmFI GGGAC 2 cut(s) 68, 578
Bsp119I TTCGAA 1 cut(s) 126
Bsp1286I GDGCHC 2 cut(s) 264, 317
Bsp143I GATC 2 cut(s) 454, 575
BspACI CCGC 1 cut(s) 343
BspCNI CTCAG 1 cut(s) 199
BspFNI CGCG 1 cut(s) 343
BspLI GGNNCC 1 cut(s) 71
BspT104I TTCGAA 1 cut(s) 126
BsrFI RCCGGY 1 cut(s) 162
BsrI ACTGG 1 cut(s) 514
BssAI RCCGGY 1 cut(s) 162
BssECI CCNNGG 2 cut(s) 51, 145
BssMI GATC 2 cut(s) 454, 575
Bst2UI CCWGG 3 cut(s) 52, 416, 480
Bst4CI ACNGT 1 cut(s) 211
Bst6I CTCTTC 2 cut(s) 29, 38
BstBI TTCGAA 1 cut(s) 126
BstDEI CTNAG 1 cut(s) 186
BstF5I GGATG 3 cut(s) 94, 424, 457
BstFNI CGCG 1 cut(s) 343
BstKTI GATC 2 cut(s) 457, 578
BstMBI GATC 2 cut(s) 454, 575
BstMCI CGRYCG 1 cut(s) 347
BstNI CCWGG 3 cut(s) 52, 416, 480
BstSCI CCNGG 4 cut(s) 50, 145, 414, 478
BstUI CGCG 1 cut(s) 343
BtsCI GGATG 3 cut(s) 94, 424, 457
BtsIMutI CAGTG 1 cut(s) 216
Cfr10I RCCGGY 1 cut(s) 162
CspAI ACCGGT 1 cut(s) 162
CviAII CATG 2 cut(s) 307, 441
CviJI RGCY 3 cut(s) 14, 144, 385
CviKI_1 RGCY 3 cut(s) 14, 144, 385
DdeI CTNAG 1 cut(s) 186
DpnI GATC 2 cut(s) 456, 577
DpnII GATC 2 cut(s) 454, 575
Eam1104I CTCTTC 2 cut(s) 29, 38
EarI CTCTTC 2 cut(s) 29, 38
Eco57I CTGAAG 2 cut(s) 104, 124
EcoRII CCWGG 3 cut(s) 50, 414, 478
FaeI CATG 2 cut(s) 310, 444
FalI AAGNNNNNCTT 1 cut(s) 35
FaqI GGGAC 2 cut(s) 68, 578
FatI CATG 2 cut(s) 306, 440
FbaI TGATCA 1 cut(s) 454
FblI GTMKAC 1 cut(s) 329
FokI GGATG 3 cut(s) 101, 431, 444
FspBI CTAG 4 cut(s) 156, 192, 287, 404
HapII CCGG 2 cut(s) 147, 163
Hin1II CATG 2 cut(s) 310, 444
HincII GTYRAC 1 cut(s) 361
HindII GTYRAC 1 cut(s) 361
HinfI GANTC 1 cut(s) 47
HpaI GTTAAC 1 cut(s) 361
HpaII CCGG 2 cut(s) 147, 163
HphI GGTGA 1 cut(s) 508
Hpy166II GTNNAC 2 cut(s) 330, 361
Hpy188I TCNGA 2 cut(s) 38, 189
Hpy8I GTNNAC 2 cut(s) 330, 361
HpyAV CCTTC 1 cut(s) 79
HpyCH4III ACNGT 1 cut(s) 211
HpyCH4V TGCA 3 cut(s) 224, 380, 557
HpyF3I CTNAG 1 cut(s) 186
Hsp92II CATG 2 cut(s) 310, 444
Ksp22I TGATCA 1 cut(s) 454
KspAI GTTAAC 1 cut(s) 361
Kzo9I GATC 2 cut(s) 454, 575
MaeI CTAG 4 cut(s) 156, 192, 287, 404
MaeIII GTNAC 1 cut(s) 540
MalI GATC 2 cut(s) 456, 577
MboI GATC 2 cut(s) 454, 575
MboII GAAGA 3 cut(s) 16, 25, 130
MfeI CAATTG 1 cut(s) 558
MhlI GDGCHC 2 cut(s) 264, 317
MluCI AATT 6 cut(s) 128, 151, 174, 474, 499, 558
MmeI TCCRAC 1 cut(s) 151
MnlI CCTC 3 cut(s) 38, 41, 262
MseI TTAA 3 cut(s) 360, 473, 527
MspI CCGG 2 cut(s) 147, 163
MspR9I CCNGG 4 cut(s) 52, 147, 416, 480
MunI CAATTG 1 cut(s) 558
MvaI CCWGG 3 cut(s) 52, 416, 480
MvnI CGCG 1 cut(s) 343
NciI CCSGG 1 cut(s) 147
NdeII GATC 2 cut(s) 454, 575
NlaIII CATG 2 cut(s) 310, 444
NlaIV GGNNCC 1 cut(s) 71
NmuCI GTSAC 1 cut(s) 540
NspV TTCGAA 1 cut(s) 126
PfeI GAWTC 1 cut(s) 47
PfoI TCCNGGA 1 cut(s) 414
PinAI ACCGGT 1 cut(s) 162
PsiI TTATAA 1 cut(s) 303
Psp6I CCWGG 3 cut(s) 50, 414, 478
PspGI CCWGG 3 cut(s) 50, 414, 478
PspN4I GGNNCC 1 cut(s) 71
SaqAI TTAA 3 cut(s) 360, 473, 527
Sau3AI GATC 2 cut(s) 454, 575
ScrFI CCNGG 4 cut(s) 52, 147, 416, 480
SduI GDGCHC 2 cut(s) 264, 317
SetI ASST 6 cut(s) 16, 254, 278, 387, 438, 484
SfuI TTCGAA 1 cut(s) 126
SpeI ACTAGT 1 cut(s) 286
Sse9I AATT 6 cut(s) 128, 151, 174, 474, 499, 558
SsiI CCGC 1 cut(s) 343
SspMI CTAG 4 cut(s) 156, 192, 287, 404
StyD4I CCNGG 4 cut(s) 50, 145, 414, 478
TaaI ACNGT 1 cut(s) 211
TaqI TCGA 1 cut(s) 126
TasI AATT 6 cut(s) 128, 151, 174, 474, 499, 558
TfiI GAWTC 1 cut(s) 47
Tru1I TTAA 3 cut(s) 360, 473, 527
Tru9I TTAA 3 cut(s) 360, 473, 527
TscAI CASTG 1 cut(s) 216
TseFI GTSAC 1 cut(s) 540
Tsp45I GTSAC 1 cut(s) 540
TspDTI ATGAA 3 cut(s) 429, 444, 500
TspGWI ACGGA 1 cut(s) 82
TspRI CASTG 1 cut(s) 216
XapI RAATTY 2 cut(s) 151, 174
XmiI GTMKAC 1 cut(s) 329
XspI CTAG 4 cut(s) 156, 192, 287, 404
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.