divergent subfamily of APPLE domains
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Bet_v_1 | PF00407 | 17 - 153 | 5e-31 | Pathogenesis-related protein Bet v 1 family |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 2 cut(s) | 27, 280 |
| AciI | CCGC | 4 cut(s) | 25, 27, 138, 480 |
| AclWI | GGATC | 1 cut(s) | 457 |
| AcuI | CTGAAG | 2 cut(s) | 66, 89 |
| AfaI | GTAC | 7 cut(s) | 98, 105, 153, 303, 330, 379, 385 |
| AflIII | ACRYGT | 1 cut(s) | 314 |
| AgsI | TTSAA | 1 cut(s) | 244 |
| AhlI | ACTAGT | 1 cut(s) | 380 |
| AjnI | CCWGG | 1 cut(s) | 42 |
| AluBI | AGCT | 7 cut(s) | 64, 75, 86, 233, 240, 345, 439 |
| AluI | AGCT | 7 cut(s) | 64, 75, 86, 233, 240, 345, 439 |
| Alw26I | GTCTC | 1 cut(s) | 44 |
| AlwI | GGATC | 1 cut(s) | 457 |
| ApeKI | GCWGC | 2 cut(s) | 64, 75 |
| AspLEI | GCGC | 1 cut(s) | 80 |
| AsuHPI | GGTGA | 4 cut(s) | 41, 113, 188, 346 |
| BbvI | GCAGC | 2 cut(s) | 51, 62 |
| BccI | CCATC | 1 cut(s) | 218 |
| BceAI | ACGGC | 1 cut(s) | 472 |
| BciT130I | CCWGG | 1 cut(s) | 44 |
| BclI | TGATCA | 2 cut(s) | 31, 145 |
| BcoDI | GTCTC | 1 cut(s) | 44 |
| BcuI | ACTAGT | 1 cut(s) | 380 |
| BfaI | CTAG | 3 cut(s) | 21, 321, 381 |
| BfmI | CTRYAG | 1 cut(s) | 219 |
| BisI | GCNGC | 4 cut(s) | 25, 65, 76, 138 |
| BlsI | GCNGC | 4 cut(s) | 26, 66, 77, 139 |
| BmcAI | AGTACT | 2 cut(s) | 379, 385 |
| Bme1390I | CCNGG | 1 cut(s) | 44 |
| BmrFI | CCNGG | 1 cut(s) | 44 |
| BmrI | ACTGGG | 1 cut(s) | 190 |
| BmsI | GCATC | 1 cut(s) | 127 |
| BmuI | ACTGGG | 1 cut(s) | 190 |
| BpmI | CTGGAG | 1 cut(s) | 77 |
| BsaAI | YACGTR | 1 cut(s) | 305 |
| BsaJI | CCNNGG | 1 cut(s) | 25 |
| Bse1I | ACTGG | 3 cut(s) | 185, 196, 391 |
| BseBI | CCWGG | 1 cut(s) | 44 |
| BseDI | CCNNGG | 1 cut(s) | 25 |
| BseMII | CTCAG | 1 cut(s) | 121 |
| BseNI | ACTGG | 3 cut(s) | 185, 196, 391 |
| BseRI | GAGGAG | 1 cut(s) | 74 |
| BseXI | GCAGC | 2 cut(s) | 51, 62 |
| Bsh1236I | CGCG | 2 cut(s) | 27, 280 |
| Bsh1285I | CGRYCG | 1 cut(s) | 284 |
| BsiEI | CGRYCG | 1 cut(s) | 284 |
| BsmAI | GTCTC | 1 cut(s) | 44 |
| Bsp1407I | TGTACA | 2 cut(s) | 96, 151 |
| Bsp143I | GATC | 4 cut(s) | 31, 145, 281, 462 |
| Bsp68I | TCGCGA | 1 cut(s) | 280 |
| BspACI | CCGC | 4 cut(s) | 25, 27, 138, 480 |
| BspCNI | CTCAG | 1 cut(s) | 120 |
| BspFNI | CGCG | 2 cut(s) | 27, 280 |
| BspPI | GGATC | 1 cut(s) | 457 |
| BspQI | GCTCTTC | 2 cut(s) | 65, 223 |
| BsrGI | TGTACA | 2 cut(s) | 96, 151 |
| BsrI | ACTGG | 3 cut(s) | 185, 196, 391 |
| BssECI | CCNNGG | 1 cut(s) | 25 |
| BssMI | GATC | 4 cut(s) | 31, 145, 281, 462 |
| Bst2UI | CCWGG | 1 cut(s) | 44 |
| Bst4CI | ACNGT | 1 cut(s) | 424 |
| Bst6I | CTCTTC | 2 cut(s) | 65, 223 |
| BstAUI | TGTACA | 2 cut(s) | 96, 151 |
| BstBAI | YACGTR | 1 cut(s) | 305 |
| BstDEI | CTNAG | 2 cut(s) | 107, 372 |
| BstDSI | CCRYGG | 1 cut(s) | 25 |
| BstEII | GGTNACC | 1 cut(s) | 352 |
| BstFNI | CGCG | 2 cut(s) | 27, 280 |
| BstHHI | GCGC | 1 cut(s) | 80 |
| BstKTI | GATC | 4 cut(s) | 34, 148, 284, 465 |
| BstMAI | GTCTC | 1 cut(s) | 44 |
| BstMBI | GATC | 4 cut(s) | 31, 145, 281, 462 |
| BstMCI | CGRYCG | 1 cut(s) | 284 |
| BstNI | CCWGG | 1 cut(s) | 44 |
| BstNSI | RCATGY | 1 cut(s) | 318 |
| BstPI | GGTNACC | 1 cut(s) | 352 |
| BstSCI | CCNGG | 1 cut(s) | 42 |
| BstSFI | CTRYAG | 1 cut(s) | 219 |
| BstUI | CGCG | 2 cut(s) | 27, 280 |
| BstV1I | GCAGC | 2 cut(s) | 51, 62 |
| BtgI | CCRYGG | 1 cut(s) | 25 |
| BtsI | GCAGTG | 1 cut(s) | 171 |
| BtsIMutI | CAGTG | 1 cut(s) | 171 |
| BtuMI | TCGCGA | 1 cut(s) | 280 |
| CfoI | GCGC | 1 cut(s) | 80 |
| Cfr42I | CCGCGG | 1 cut(s) | 28 |
| CsiI | ACCWGGT | 1 cut(s) | 42 |
| Csp6I | GTAC | 7 cut(s) | 97, 104, 152, 302, 329, 378, 384 |
| CviAII | CATG | 3 cut(s) | 149, 170, 315 |
| CviQI | GTAC | 7 cut(s) | 97, 104, 152, 302, 329, 378, 384 |
| DdeI | CTNAG | 2 cut(s) | 107, 372 |
| DpnI | GATC | 4 cut(s) | 33, 147, 283, 464 |
| DpnII | GATC | 4 cut(s) | 31, 145, 281, 462 |
| Eam1104I | CTCTTC | 2 cut(s) | 65, 223 |
| EarI | CTCTTC | 2 cut(s) | 65, 223 |
| Eco57I | CTGAAG | 2 cut(s) | 66, 89 |
| Eco91I | GGTNACC | 1 cut(s) | 352 |
| EcoO65I | GGTNACC | 1 cut(s) | 352 |
| EcoRII | CCWGG | 1 cut(s) | 42 |
| FaeI | CATG | 3 cut(s) | 152, 173, 318 |
| FaiI | YATR | 8 cut(s) | 150, 171, 221, 316, 348, 432, 470, 496 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 341, 373 |
| FatI | CATG | 3 cut(s) | 148, 169, 314 |
| FbaI | TGATCA | 2 cut(s) | 31, 145 |
| Fnu4HI | GCNGC | 4 cut(s) | 25, 65, 76, 138 |
| Fsp4HI | GCNGC | 4 cut(s) | 25, 65, 76, 138 |
| FspBI | CTAG | 3 cut(s) | 21, 321, 381 |
| GlaI | GCGC | 1 cut(s) | 79 |
| GluI | GCNGC | 4 cut(s) | 25, 65, 76, 138 |
| GsuI | CTGGAG | 1 cut(s) | 77 |
| HhaI | GCGC | 1 cut(s) | 80 |
| Hin1II | CATG | 3 cut(s) | 152, 173, 318 |
| Hin6I | GCGC | 1 cut(s) | 78 |
| HinP1I | GCGC | 1 cut(s) | 78 |
| HindIII | AAGCTT | 1 cut(s) | 238 |
| HinfI | GANTC | 1 cut(s) | 52 |
| HphI | GGTGA | 4 cut(s) | 41, 113, 188, 346 |
| Hpy166II | GTNNAC | 2 cut(s) | 97, 302 |
| Hpy188I | TCNGA | 2 cut(s) | 145, 341 |
| Hpy188III | TCNNGA | 4 cut(s) | 56, 131, 279, 392 |
| Hpy8I | GTNNAC | 2 cut(s) | 97, 302 |
| HpyAV | CCTTC | 6 cut(s) | 167, 303, 328, 389, 395, 468 |
| HpyCH4III | ACNGT | 1 cut(s) | 424 |
| HpyCH4IV | ACGT | 1 cut(s) | 304 |
| HpyCH4V | TGCA | 2 cut(s) | 164, 169 |
| HpyF3I | CTNAG | 2 cut(s) | 107, 372 |
| HpySE526I | ACGT | 1 cut(s) | 304 |
| Hsp92II | CATG | 3 cut(s) | 152, 173, 318 |
| HspAI | GCGC | 1 cut(s) | 78 |
| Ksp22I | TGATCA | 2 cut(s) | 31, 145 |
| KspI | CCGCGG | 1 cut(s) | 28 |
| Kzo9I | GATC | 4 cut(s) | 31, 145, 281, 462 |
| LguI | GCTCTTC | 2 cut(s) | 65, 223 |
| LmnI | GCTCC | 2 cut(s) | 61, 460 |
| Lsp1109I | GCAGC | 2 cut(s) | 51, 62 |
| LweI | GCATC | 1 cut(s) | 127 |
| MabI | ACCWGGT | 1 cut(s) | 42 |
| MaeI | CTAG | 3 cut(s) | 21, 321, 381 |
| MaeII | ACGT | 1 cut(s) | 304 |
| MaeIII | GTNAC | 2 cut(s) | 176, 352 |
| MalI | GATC | 4 cut(s) | 33, 147, 283, 464 |
| MboI | GATC | 4 cut(s) | 31, 145, 281, 462 |
| MboII | GAAGA | 2 cut(s) | 82, 240 |
| MluCI | AATT | 1 cut(s) | 417 |
| MlyI | GAGTC | 1 cut(s) | 46 |
| MnlI | CCTC | 5 cut(s) | 52, 134, 151, 476, 487 |
| MslI | CAYNNNNRTG | 1 cut(s) | 174 |
| MspA1I | CMGCKG | 2 cut(s) | 27, 86 |
| MspR9I | CCNGG | 1 cut(s) | 44 |
| MvaI | CCWGG | 1 cut(s) | 44 |
| MvnI | CGCG | 2 cut(s) | 27, 280 |
| NdeII | GATC | 4 cut(s) | 31, 145, 281, 462 |
| NlaIII | CATG | 3 cut(s) | 152, 173, 318 |
| NmuCI | GTSAC | 2 cut(s) | 176, 352 |
| NruI | TCGCGA | 1 cut(s) | 280 |
| NspI | RCATGY | 1 cut(s) | 318 |
| PciI | ACATGT | 1 cut(s) | 314 |
| PciSI | GCTCTTC | 2 cut(s) | 65, 223 |
| PkrI | GCNGC | 4 cut(s) | 26, 66, 77, 139 |
| Ple19I | CGATCG | 1 cut(s) | 284 |
| PleI | GAGTC | 1 cut(s) | 46 |
| PpsI | GAGTC | 1 cut(s) | 46 |
| Ppu21I | YACGTR | 1 cut(s) | 305 |
| PscI | ACATGT | 1 cut(s) | 314 |
| Psp6I | CCWGG | 1 cut(s) | 42 |
| PspEI | GGTNACC | 1 cut(s) | 352 |
| PspGI | CCWGG | 1 cut(s) | 42 |
| PvuI | CGATCG | 1 cut(s) | 284 |
| PvuII | CAGCTG | 1 cut(s) | 86 |
| RruI | TCGCGA | 1 cut(s) | 280 |
| RsaI | GTAC | 7 cut(s) | 98, 105, 153, 303, 330, 379, 385 |
| RsaNI | GTAC | 7 cut(s) | 97, 104, 152, 302, 329, 378, 384 |
| RseI | CAYNNNNRTG | 1 cut(s) | 174 |
| SacII | CCGCGG | 1 cut(s) | 28 |
| SapI | GCTCTTC | 2 cut(s) | 65, 223 |
| SatI | GCNGC | 4 cut(s) | 25, 65, 76, 138 |
| Sau3AI | GATC | 4 cut(s) | 31, 145, 281, 462 |
| ScaI | AGTACT | 2 cut(s) | 379, 385 |
| SchI | GAGTC | 1 cut(s) | 46 |
| ScrFI | CCNGG | 1 cut(s) | 44 |
| SexAI | ACCWGGT | 1 cut(s) | 42 |
| SfaNI | GCATC | 1 cut(s) | 127 |
| SfcI | CTRYAG | 1 cut(s) | 219 |
| Sfr303I | CCGCGG | 1 cut(s) | 28 |
| SgrBI | CCGCGG | 1 cut(s) | 28 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 174 |
| SpeI | ACTAGT | 1 cut(s) | 380 |
| Sse9I | AATT | 1 cut(s) | 417 |
| SsiI | CCGC | 4 cut(s) | 25, 27, 138, 480 |
| SspMI | CTAG | 3 cut(s) | 21, 321, 381 |
| StyD4I | CCNGG | 1 cut(s) | 42 |
| TaaI | ACNGT | 1 cut(s) | 424 |
| TaiI | ACGT | 1 cut(s) | 307 |
| TaqI | TCGA | 1 cut(s) | 461 |
| TasI | AATT | 1 cut(s) | 417 |
| TatI | WGTACW | 5 cut(s) | 96, 151, 328, 377, 383 |
| TauI | GCSGC | 2 cut(s) | 27, 140 |
| TscAI | CASTG | 1 cut(s) | 171 |
| TseFI | GTSAC | 2 cut(s) | 176, 352 |
| TseI | GCWGC | 2 cut(s) | 64, 75 |
| Tsp45I | GTSAC | 2 cut(s) | 176, 352 |
| TspDTI | ATGAA | 3 cut(s) | 105, 186, 279 |
| TspRI | CASTG | 1 cut(s) | 171 |
| XceI | RCATGY | 1 cut(s) | 318 |
| XspI | CTAG | 3 cut(s) | 21, 321, 381 |
| ZrmI | AGTACT | 2 cut(s) | 379, 385 |