Rw0G002370

serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Contig00072
OG0000112
Physical Location & Seq
Forward (+)
231278 .. 233732
2455 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw0G002370.1

Sequence Viewer

Length: 1698 bp
ATGAAGTTGAAGTTTTCTGGGCTACATCAGCACTTGGTATGGAGTGATGCTGACCATCAATGGAAGGAGTTGTGGTCTGCCCCGAAATACAGGTGTGACTGGTATGGACATTGTGGGGCCAACAGCAAATGTAGCCTTGACAGTGCTAATCTGTTCGAGTGTGAGTGTCTACCGGGGTATGAACCAAAATCTATAAATGGTTGGAATGGGAGAGATGGGTCAGATGGATGTGTGAGTAAACGAGTCAAAGTGTCAAAGTGTAGAAATGGAGAAGGGTTTGTGAAGGTGGAAAGGGTGAAAGATCCAGACACATCGAGAGCAGCATTGTTGAAAAGAGGTATGAGTACCAAAGAGTGTGAGCAGGAGTGCCTAAGAAATTGTTCTTGCACGGCATATGTGACGAAAAAGATTGAAGGGGTTGTTAATTGCTTGACATGGTATGATGACTTGATGGACATTTTGGTTTACACAGAGGCCGGACGAGATCTGTATGTTCGTGTGGATAAAATCGAGTTAGCTGAGAATGCCGCAAACTCACAAGGATTCTTCAGGAGGGGCATGCTTGTTATTCCAGTACTGTTTGCTCTGCTGGACCTAGTACTAATAAATGTGCTTGCCTGTTGGTTGCTTAAGAAAAAAGGGAAGACAAAAGTCTTTGTGGATGTGGATGAACTTGAGGAAAGCAAGAGACACCCGGAATTGCAATTTTTCGATCTGAACACACTAGTAGCAGCCACAGATAATTTCTCTGATGTTAATAAACTTGGCGAAGGTGGCTTTGGTGGTGTTTATAAGGGTGAGTTACCAAATGGACAGAAGGTTGCTGTGAAAAGACTGTCTAGCAGCTCAGGACAAGGGATTGGTGAATTCAAAAATGAAGTTGAACTGATAGCAGGACTTCAACACAGGAATCTTGTGAAGCTTTTAGGTTGTTGTATAAAGGGAGGAGAAAGGATGCTAGTCCTCGAATATATGCCGAACAAAAGCTTGGACTCATTTCTTTTTGATGACACTAGAAGGTCCTTCTTAGATTGGGGAAGGCGTTTTGAGATTATCAATGGGGTTGCTCGTGGGCTTTTGTATCTTCACCAAGACTCGAGATTAAGGATTATTCATAGGGATCTAAAAACCAGCAATATTCTTCTAGATGATGAGATGACCCCAAAAATCTCAGATTTCGGCATGGCAAGAATATTCCATGGGGACCAACTTCAGGATAACACAAAGAAAGTTGTTGGAACATATGGCTATATGTCACCAGAGTATGCAGTGTTTGGGAGATTCTCTATGAAATCGGATGTGTTTAGTTTTGGGATTATACTATTGGAGATTGTTAGTGGCAAGAGAAACAATGGTTCTTATGAGGAGAATTACTCCATGAACCTGATAGGACATGTTTGGCATGTGTGGAAAGAAGGAATAGCCTTAAATATTGTGGATTCATCGCTACAATCATATAAGCATGATGAAGTTTTGAGATGCATTCAAGTTGGACTGTTGTGCGTGCAAGAAGATTCAAAGGACCGGCCAGCCATGTCATCCATTGTGTTCATGTTGAGTGGTGAGGCATCTCTTCCATCTCCTAAGCAGCCTGCATTTGTCTTCCGAAGAAATTCCAGCAATGCTGCTGATTGCTCAAGTCCAAAAGAATTGCATTCTATTAACGACTTGACAATAACTATTGTGGGAGCTCGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
B_lectin DUF3403 PAN_2 Pkinase Pkinase_Tyr S_locus_glycop

Protein Analysis

565

Amino Acids

63.59

Weight (kDa)

7.48

Isoelectric Point (pI)

45.71

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
S_locus_glycop PF00954 2 - 64 1.3e-12 S-locus glycoprotein domain
PAN_2 PF08276 87 - 153 3e-18 PAN-like domain
Pkinase PF00069 250 - 515 7.5e-44 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 253 - 516 6.3e-48 Protein tyrosine and serine/threonine kinase
DUF3403 PF11883 522 - 565 3.9e-09 Domain of unknown function (DUF3403)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000112)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g03320 FvH4_3g03322 FvH4_3g03323 FvH4_3g03340 FvH4_3g03350 FvH4_3g03351 FvH4_3g03370 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g06140 FvH4_6g00257 FvH4_6g00257 FvH4_6g00270 FvH4_6g00300 FvH4_6g20800 FvH4_6g20800 FvH4_6g20800 FvH4_6g20800 FvH4_6g20800
malus_domestica MD05G1232700.v1.1 MD05G1327700.v1.1 MD05G1327800.v1.1 MD05G1327900.v1.1 MD05G1328000.v1.1 MD05G1328200.v1.1 MD05G1328300.v1.1 MD05G1328500.v1.1 MD05G1332000.v1.1 MD05G1332100.v1.1 MD10G1307600.v1.1 MD10G1307800.v1.1
prunus_persica Prupe.4G031900_v2.0.a1 Prupe.4G032000_v2.0.a1 Prupe.4G032000_v2.0.a1 Prupe.4G032100_v2.0.a1 Prupe.4G032200_v2.0.a1 Prupe.4G032200_v2.0.a1 Prupe.4G032200_v2.0.a1
pyrus_communis pycom05g30180 pycom05g30190 pycom05g30200 pycom05g30210 pycom10g25920 pycom10g25930
rosa_chinensis RchiOBHm_Chr2g0130831 RchiOBHm_Chr2g0132531 RchiOBHm_Chr2g0132541 RchiOBHm_Chr3g0455681 RchiOBHm_Chr3g0476681 RchiOBHm_Chr3g0476761 RchiOBHm_Chr3g0476771 RchiOBHm_Chr3g0476791 RchiOBHm_Chr3g0476801 RchiOBHm_Chr3g0476811 RchiOBHm_Chr4g0413551 RchiOBHm_Chr4g0413561 RchiOBHm_Chr5g0002911 RchiOBHm_Chr5g0005071 RchiOBHm_Chr5g0005101 RchiOBHm_Chr5g0005111 RchiOBHm_Chr5g0005121 RchiOBHm_Chr5g0005131 RchiOBHm_Chr5g0005141 RchiOBHm_Chr5g0005161 RchiOBHm_Chr5g0005171 RchiOBHm_Chr5g0006341 RchiOBHm_Chr5g0046161 RchiOBHm_Chr5g0046171 RchiOBHm_Chr5g0046181 RchiOBHm_Chr5g0046221 RchiOBHm_Chr5g0046231 RchiOBHm_Chr7g0224061 RchiOBHm_Chr7g0224081 RchiOBHm_Chr7g0224101 RchiOBHm_Chr7g0224111 RchiOBHm_Chr7g0224121
rosa_laevigata RLG00000010193 RLG00000019146 RLG00000019148 RLG00000019149 RLG00000019150 RLG00000023750 RLG00000023751 RLG00000023753 RLG00000029486 RLG00000031068 RLG00000031069 RLG00000031284 RLG00000031285 RLG00000031286 RLG00000031289 RLG00000031290 RLG00000031291 RLG00000031292 RLG00000031293 RLG00000031294 RLG00000031295 RLG00000031296 RLG00000031297 RLG00000031363 RLG00000032618 RLG00000032619
rosa_multiflora Rmu_co8147584.1_g000001 Rmu_co8205828.1_g000001 Rmu_co8373645.1_g000001 Rmu_co8407679.1_g000001 Rmu_co8452561.1_g000001 Rmu_sc0001035.1_g000076 Rmu_sc0001884.1_g000026 Rmu_sc0001884.1_g000027 Rmu_sc0001884.1_g000035 Rmu_sc0002157.1_g000026 Rmu_sc0002399.1_g000006 Rmu_sc0002399.1_g000007 Rmu_sc0002883.1_g000010 Rmu_sc0003629.1_g000014 Rmu_sc0003884.1_g000004 Rmu_sc0007865.1_g000005 Rmu_sc0008085.1_g000013 Rmu_sc0008085.1_g000014 Rmu_sc0008085.1_g000016 Rmu_sc0008085.1_g000018 Rmu_sc0008432.1_g000004 Rmu_sc0008714.1_g000002 Rmu_sc0009296.1_g000008 Rmu_sc0009296.1_g000009 Rmu_sc0009296.1_g000011 Rmu_sc0010281.1_g000001 Rmu_sc0010281.1_g000002 Rmu_sc0010714.1_g000011 Rmu_sc0010714.1_g000016 Rmu_sc0011169.1_g000001 Rmu_sc0011169.1_g000007 Rmu_sc0013603.1_g000006 Rmu_sc0020478.1_g000003 Rmu_sc0020478.1_g000007 Rmu_sc0025106.1_g000012 Rmu_sc0032709.1_g000001 Rmu_sc0033028.1_g000001
rosa_roxburghii Rroxscaffold_1G00069570 Rroxscaffold_1G00069610 Rroxscaffold_1G00069620 Rroxscaffold_1G00070480 Rroxscaffold_1G00070490 Rroxscaffold_1G00070500 Rroxscaffold_1G00070510 Rroxscaffold_1G00070520 Rroxscaffold_1G00070530 Rroxscaffold_1G00070540 Rroxscaffold_1G00070550 Rroxscaffold_1G00070590 Rroxscaffold_1G00072950 Rroxscaffold_1G00073080 Rroxscaffold_2G00111810 Rroxscaffold_2G00111820 Rroxscaffold_2G00113530 Rroxscaffold_2G00113870 Rroxscaffold_6G00405010 Rroxscaffold_6G00405020 Rroxscaffold_6G00423590 Rroxscaffold_6G00424100
rosa_rugosa Rorug02G0293200 Rorug02G0293300 Rorug02G0293400 Rorug02G0305900 Rorug02G0305900 Rorug03G0009100 Rorug03G0157000 Rorug03G0157000 Rorug03G0304900 Rorug04G0400500 Rorug04G0415200 Rorug04G0415300 Rorug04G0415400 Rorug04G0415500 Rorug04G0421100 Rorug05G0068000 Rorug05G0068100 Rorug05G0068200 Rorug05G0068500 Rorug05G0224600 Rorug05G0224700
rosa_samantha Rh2CG331700 Rh2CG341600 Rh2CG341700 Rh2DG381200 Rh3DG071200 Rh3DG233400 Rh3DG233500 Rh3DG233600 Rh5AG043100 Rh5CG026000 Rh5CG047700 Rh5CG047800 Rh5CG047900 Rh5CG048000 Rh5CG048100 Rh5CG048300 Rh5CG056500 Rh5CG340500 Rh5CG340700 Rh5CG340800 Rh7AG365000
rosa_wichuraiana Rw0G002360 Rw0G002370 Rw0G012520 Rw0G018230 Rw0G019190 Rw2G027480 Rw2G029150 Rw3G005520 Rw3G005880 Rw3G005890 Rw3G018840 Rw3G018850 Rw3G018870 Rw3G018880 Rw3G020740 Rw5G002190 Rw5G004180 Rw5G004190 Rw5G004890 Rw5G013960 Rw5G014000 Rw5G028610 Rw7G030910 Rw7G030920

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 792
AccI GTMKAC 1 cut(s) 169
AciI CCGC 1 cut(s) 528
AclWI GGATC 2 cut(s) 296, 1128
AcoI YGGCCR 1 cut(s) 1526
AcsI RAATTY 2 cut(s) 866, 1612
AcuI CTGAAG 2 cut(s) 532, 1196
AfaI GTAC 3 cut(s) 346, 576, 600
AfiI CCNNNNNNNGG 1 cut(s) 1213
AflII CTTAAG 1 cut(s) 629
AflIII ACRYGT 1 cut(s) 1393
AgsI TTSAA 8 cut(s) 10, 331, 413, 871, 884, 902, 1487, 1518
AhlI ACTAGT 1 cut(s) 724
AjuI GAANNNNNNNTTGG 4 cut(s) 762, 794, 971, 1003
AluBI AGCT 5 cut(s) 518, 846, 922, 987, 1691
AluI AGCT 5 cut(s) 518, 846, 922, 987, 1691
Alw21I GWGCWC 1 cut(s) 1693
Alw26I GTCTC 1 cut(s) 682
AlwI GGATC 2 cut(s) 296, 1128
Ama87I CYCGRG 1 cut(s) 1096
AoxI GGCC 3 cut(s) 117, 474, 1526
ApeKI GCWGC 5 cut(s) 320, 731, 843, 1588, 1625
ApoI RAATTY 2 cut(s) 866, 1612
Asp700I GAANNNNTTC 2 cut(s) 379, 1612
AspS9I GGNCC 5 cut(s) 117, 592, 1020, 1204, 1522
AsuC2I CCSGG 2 cut(s) 174, 695
AsuHPI GGTGA 6 cut(s) 307, 809, 875, 1079, 1248, 1574
AvaI CYCGRG 1 cut(s) 1096
AvaII GGWCC 4 cut(s) 592, 1020, 1204, 1522
BanII GRGCYC 1 cut(s) 1693
BauI CACGAG 1 cut(s) 1068
BbsI GAAGAC 2 cut(s) 650, 1594
Bbv12I GWGCWC 1 cut(s) 1693
BbvI GCAGC 5 cut(s) 332, 743, 855, 1600, 1612
BccI CCATC 5 cut(s) 63, 209, 218, 445, 1585
BceAI ACGGC 1 cut(s) 405
BcnI CCSGG 2 cut(s) 174, 695
BcoDI GTCTC 1 cut(s) 682
BcuI ACTAGT 1 cut(s) 724
BfaI CTAG 6 cut(s) 596, 725, 840, 959, 1014, 1145
BfrI CTTAAG 1 cut(s) 629
BglII AGATCT 1 cut(s) 484
BisI GCNGC 6 cut(s) 321, 528, 732, 844, 1589, 1626
BlsI GCNGC 6 cut(s) 322, 529, 733, 845, 1590, 1627
BmcAI AGTACT 2 cut(s) 576, 600
Bme1390I CCNGG 2 cut(s) 174, 695
Bme18I GGWCC 4 cut(s) 592, 1020, 1204, 1522
BmeT110I CYCGRG 1 cut(s) 1096
BmgT120I GGNCC 5 cut(s) 117, 592, 1020, 1204, 1522
BmiI GGNNCC 2 cut(s) 118, 1205
BmrFI CCNGG 2 cut(s) 174, 695
BmsI GCATC 4 cut(s) 37, 945, 1469, 1577
BoxI GACNNNNGTC 1 cut(s) 650
BpiI GAAGAC 2 cut(s) 650, 1594
BplI GAGNNNNNCTC 2 cut(s) 1358, 1390
Bpu10I CCTNAGC 2 cut(s) 847, 1584
BpuEI CTTGAG 2 cut(s) 695, 1621
BpuMI CCSGG 2 cut(s) 174, 695
BsaJI CCNNGG 2 cut(s) 173, 1198
BsaXI ACNNNNNCTCC 2 cut(s) 59, 89
Bsc4I CCNNNNNNNGG 1 cut(s) 1213
Bse118I RCCGGY 1 cut(s) 1524
Bse1I ACTGG 2 cut(s) 104, 572
Bse3DI GCAATG 1 cut(s) 1627
BseDI CCNNGG 2 cut(s) 173, 1198
BseGI GGATG 6 cut(s) 233, 667, 673, 960, 1303, 1538
BseLI CCNNNNNNNGG 1 cut(s) 1213
BseMI GCAATG 1 cut(s) 1627
BseMII CTCAG 3 cut(s) 510, 861, 1185
BseNI ACTGG 2 cut(s) 104, 572
BseRI GAGGAG 2 cut(s) 960, 1379
BseXI GCAGC 5 cut(s) 332, 743, 855, 1600, 1612
BshFI GGCC 3 cut(s) 119, 476, 1528
BsiHKAI GWGCWC 1 cut(s) 1693
BsiHKCI CYCGRG 1 cut(s) 1096
BsiSI CCGG 4 cut(s) 173, 477, 695, 1525
BslFI GGGAC 1 cut(s) 1217
BslI CCNNNNNNNGG 1 cut(s) 1213
BsmAI GTCTC 1 cut(s) 682
BsmFI GGGAC 1 cut(s) 1217
BsmI GAATGC 3 cut(s) 529, 1482, 1654
BsnI GGCC 3 cut(s) 119, 476, 1528
BsoBI CYCGRG 1 cut(s) 1096
Bsp1286I GDGCHC 1 cut(s) 1693
Bsp143I GATC 4 cut(s) 301, 484, 712, 1120
Bsp19I CCATGG 1 cut(s) 1198
BspACI CCGC 1 cut(s) 528
BspANI GGCC 3 cut(s) 119, 476, 1528
BspCNI CTCAG 3 cut(s) 511, 860, 1184
BspLI GGNNCC 2 cut(s) 118, 1205
BspPI GGATC 2 cut(s) 296, 1128
BspTI CTTAAG 1 cut(s) 629
BsrDI GCAATG 1 cut(s) 1627
BsrFI RCCGGY 1 cut(s) 1524
BsrI ACTGG 2 cut(s) 104, 572
BssAI RCCGGY 1 cut(s) 1524
BssECI CCNNGG 2 cut(s) 173, 1198
BssMI GATC 4 cut(s) 301, 484, 712, 1120
BssSI CACGAG 1 cut(s) 1068
BssT1I CCWWGG 1 cut(s) 1198
Bst2BI CACGAG 1 cut(s) 1068
Bst4CI ACNGT 4 cut(s) 143, 579, 837, 1497
Bst6I CTCTTC 1 cut(s) 1578
BstAFI CTTAAG 1 cut(s) 629
BstC8I GCNNGC 5 cut(s) 560, 615, 1505, 1530, 1593
BstDEI CTNAG 6 cut(s) 371, 519, 847, 1027, 1171, 1584
BstDSI CCRYGG 1 cut(s) 1198
BstF5I GGATG 6 cut(s) 233, 667, 673, 960, 1303, 1538
BstKTI GATC 4 cut(s) 304, 487, 715, 1123
BstMAI GTCTC 1 cut(s) 682
BstMBI GATC 4 cut(s) 301, 484, 712, 1120
BstMWI GCNNNNNNNGC 4 cut(s) 28, 132, 524, 774
BstNSI RCATGY 3 cut(s) 562, 1397, 1406
BstPAI GACNNNNGTC 1 cut(s) 650
BstSCI CCNGG 2 cut(s) 172, 693
BstV1I GCAGC 5 cut(s) 332, 743, 855, 1600, 1612
BstV2I GAAGAC 2 cut(s) 650, 1594
BstX2I RGATCY 3 cut(s) 301, 484, 1120
BstYI RGATCY 3 cut(s) 301, 484, 1120
BsuRI GGCC 3 cut(s) 119, 476, 1528
BtgI CCRYGG 1 cut(s) 1198
BtgZI GCGATG 1 cut(s) 1428
BtsCI GGATG 6 cut(s) 233, 667, 673, 960, 1303, 1538
BtsI GCAGTG 1 cut(s) 1275
BtsIMutI CAGTG 2 cut(s) 148, 1275
Cac8I GCNNGC 5 cut(s) 560, 615, 1505, 1530, 1593
Cfr10I RCCGGY 1 cut(s) 1524
Cfr13I GGNCC 5 cut(s) 117, 592, 1020, 1204, 1522
Csp6I GTAC 3 cut(s) 345, 575, 599
CviQI GTAC 3 cut(s) 345, 575, 599
DdeI CTNAG 6 cut(s) 371, 519, 847, 1027, 1171, 1584
DpnI GATC 4 cut(s) 303, 486, 714, 1122
DpnII GATC 4 cut(s) 301, 484, 712, 1120
EaeI YGGCCR 1 cut(s) 1526
Eam1104I CTCTTC 1 cut(s) 1578
EarI CTCTTC 1 cut(s) 1578
Ecl136II GAGCTC 1 cut(s) 1691
Eco130I CCWWGG 1 cut(s) 1198
Eco24I GRGCYC 1 cut(s) 1693
Eco47I GGWCC 4 cut(s) 592, 1020, 1204, 1522
Eco53kI GAGCTC 1 cut(s) 1691
Eco57I CTGAAG 2 cut(s) 532, 1196
Eco88I CYCGRG 1 cut(s) 1096
EcoICRI GAGCTC 1 cut(s) 1691
EcoO109I RGGNCCY 1 cut(s) 1020
EcoRI GAATTC 1 cut(s) 866
EcoT14I CCWWGG 1 cut(s) 1198
EcoT22I ATGCAT 1 cut(s) 1484
EcoT38I GRGCYC 1 cut(s) 1693
ErhI CCWWGG 1 cut(s) 1198
FaqI GGGAC 1 cut(s) 1217
FauNDI CATATG 2 cut(s) 394, 1243
FblI GTMKAC 1 cut(s) 169
Fnu4HI GCNGC 6 cut(s) 321, 528, 732, 844, 1589, 1626
FokI GGATG 6 cut(s) 240, 674, 680, 967, 1310, 1525
FriOI GRGCYC 1 cut(s) 1693
Fsp4HI GCNGC 6 cut(s) 321, 528, 732, 844, 1589, 1626
FspBI CTAG 6 cut(s) 596, 725, 840, 959, 1014, 1145
GluI GCNGC 6 cut(s) 321, 528, 732, 844, 1589, 1626
HaeIII GGCC 3 cut(s) 119, 476, 1528
HapII CCGG 4 cut(s) 173, 477, 695, 1525
HindIII AAGCTT 2 cut(s) 920, 985
HinfI GANTC 8 cut(s) 243, 543, 910, 992, 1094, 1281, 1439, 1514
HpaII CCGG 4 cut(s) 173, 477, 695, 1525
HphI GGTGA 6 cut(s) 307, 809, 875, 1079, 1248, 1574
Hpy166II GTNNAC 3 cut(s) 170, 239, 466
Hpy188I TCNGA 6 cut(s) 223, 717, 751, 1174, 1297, 1607
Hpy188III TCNNGA 7 cut(s) 305, 315, 550, 849, 1098, 1145, 1214
Hpy8I GTNNAC 3 cut(s) 170, 239, 466
HpyCH4III ACNGT 4 cut(s) 143, 579, 837, 1497
HpyCH4V TGCA 7 cut(s) 387, 703, 1268, 1482, 1507, 1595, 1654
HpyF10VI GCNNNNNNNGC 4 cut(s) 28, 132, 524, 774
HpyF3I CTNAG 6 cut(s) 371, 519, 847, 1027, 1171, 1584
Kzo9I GATC 4 cut(s) 301, 484, 712, 1120
LmnI GCTCC 1 cut(s) 1688
Lsp1109I GCAGC 5 cut(s) 332, 743, 855, 1600, 1612
LweI GCATC 4 cut(s) 37, 945, 1469, 1577
MaeI CTAG 6 cut(s) 596, 725, 840, 959, 1014, 1145
MaeIII GTNAC 4 cut(s) 95, 397, 801, 1254
MalI GATC 4 cut(s) 303, 486, 714, 1122
MboI GATC 4 cut(s) 301, 484, 712, 1120
MboII GAAGA 8 cut(s) 538, 655, 1076, 1133, 1523, 1565, 1594, 1620
MflI RGATCY 3 cut(s) 301, 484, 1120
MhlI GDGCHC 1 cut(s) 1693
MluCI AATT 9 cut(s) 376, 424, 698, 704, 742, 866, 1369, 1612, 1649
MlyI GAGTC 3 cut(s) 252, 986, 1088
MmeI TCCRAC 3 cut(s) 182, 1216, 1471
MnlI CCTC 8 cut(s) 329, 466, 546, 670, 938, 974, 1357, 1558
Mph1103I ATGCAT 1 cut(s) 1484
MroXI GAANNNNTTC 2 cut(s) 379, 1612
MseI TTAA 6 cut(s) 423, 630, 756, 1103, 1427, 1662
MspCI CTTAAG 1 cut(s) 629
MspI CCGG 4 cut(s) 173, 477, 695, 1525
MspR9I CCNGG 2 cut(s) 174, 695
Mva1269I GAATGC 3 cut(s) 529, 1482, 1654
MwoI GCNNNNNNNGC 4 cut(s) 28, 132, 524, 774
NciI CCSGG 2 cut(s) 174, 695
NcoI CCATGG 1 cut(s) 1198
NdeI CATATG 2 cut(s) 394, 1243
NdeII GATC 4 cut(s) 301, 484, 712, 1120
NlaIV GGNNCC 2 cut(s) 118, 1205
NmuCI GTSAC 3 cut(s) 95, 397, 1254
NsiI ATGCAT 1 cut(s) 1484
NspI RCATGY 3 cut(s) 562, 1397, 1406
PaeI GCATGC 1 cut(s) 562
PaeR7I CTCGAG 1 cut(s) 1096
PciI ACATGT 1 cut(s) 1393
PctI GAATGC 3 cut(s) 529, 1482, 1654
PdmI GAANNNNTTC 2 cut(s) 379, 1612
PfeI GAWTC 5 cut(s) 543, 910, 1281, 1439, 1514
PkrI GCNGC 6 cut(s) 322, 529, 733, 845, 1590, 1627
PleI GAGTC 3 cut(s) 251, 986, 1088
PpsI GAGTC 3 cut(s) 251, 986, 1088
PpuMI RGGWCCY 1 cut(s) 1020
PscI ACATGT 1 cut(s) 1393
PshAI GACNNNNGTC 1 cut(s) 650
PsiI TTATAA 1 cut(s) 792
Psp124BI GAGCTC 1 cut(s) 1693
Psp5II RGGWCCY 1 cut(s) 1020
PspN4I GGNNCC 2 cut(s) 118, 1205
PspPI GGNCC 5 cut(s) 117, 592, 1020, 1204, 1522
PspPPI RGGWCCY 1 cut(s) 1020
PsuI RGATCY 3 cut(s) 301, 484, 1120
RsaI GTAC 3 cut(s) 346, 576, 600
RsaNI GTAC 3 cut(s) 345, 575, 599
SacI GAGCTC 1 cut(s) 1693
SaqAI TTAA 6 cut(s) 423, 630, 756, 1103, 1427, 1662
SatI GCNGC 6 cut(s) 321, 528, 732, 844, 1589, 1626
Sau3AI GATC 4 cut(s) 301, 484, 712, 1120
Sau96I GGNCC 5 cut(s) 117, 592, 1020, 1204, 1522
ScaI AGTACT 2 cut(s) 576, 600
SchI GAGTC 3 cut(s) 252, 986, 1088
ScrFI CCNGG 2 cut(s) 174, 695
SduI GDGCHC 1 cut(s) 1693
SfaNI GCATC 4 cut(s) 37, 945, 1469, 1577
Sfr274I CTCGAG 1 cut(s) 1096
SinI GGWCC 4 cut(s) 592, 1020, 1204, 1522
SlaI CTCGAG 1 cut(s) 1096
SmlI CTYRAG 4 cut(s) 629, 674, 1096, 1636
SmoI CTYRAG 4 cut(s) 629, 674, 1096, 1636
SpeI ACTAGT 1 cut(s) 724
SphI GCATGC 1 cut(s) 562
Sse9I AATT 9 cut(s) 376, 424, 698, 704, 742, 866, 1369, 1612, 1649
SsiI CCGC 1 cut(s) 528
SspI AATATT 3 cut(s) 1138, 1194, 1432
SspMI CTAG 6 cut(s) 596, 725, 840, 959, 1014, 1145
SstI GAGCTC 1 cut(s) 1693
StyD4I CCNGG 2 cut(s) 172, 693
StyI CCWWGG 1 cut(s) 1198
TaaI ACNGT 4 cut(s) 143, 579, 837, 1497
TaqI TCGA 7 cut(s) 156, 314, 510, 711, 966, 1097, 1693
TasI AATT 9 cut(s) 376, 424, 698, 704, 742, 866, 1369, 1612, 1649
TatI WGTACW 2 cut(s) 574, 598
TauI GCSGC 1 cut(s) 530
TfiI GAWTC 5 cut(s) 543, 910, 1281, 1439, 1514
Tru1I TTAA 6 cut(s) 423, 630, 756, 1103, 1427, 1662
Tru9I TTAA 6 cut(s) 423, 630, 756, 1103, 1427, 1662
TscAI CASTG 2 cut(s) 148, 1275
TseFI GTSAC 3 cut(s) 95, 397, 1254
TseI GCWGC 5 cut(s) 320, 731, 843, 1588, 1625
Tsp45I GTSAC 3 cut(s) 95, 397, 1254
TspRI CASTG 2 cut(s) 148, 1275
Vha464I CTTAAG 1 cut(s) 629
VpaK11BI GGWCC 4 cut(s) 592, 1020, 1204, 1522
XapI RAATTY 2 cut(s) 866, 1612
XbaI TCTAGA 1 cut(s) 1144
XceI RCATGY 3 cut(s) 562, 1397, 1406
XhoI CTCGAG 1 cut(s) 1096
XmiI GTMKAC 1 cut(s) 169
XmnI GAANNNNTTC 2 cut(s) 379, 1612
XspI CTAG 6 cut(s) 596, 725, 840, 959, 1014, 1145
ZrmI AGTACT 2 cut(s) 576, 600
Zsp2I ATGCAT 1 cut(s) 1484
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.