Rmu_sc0033028.1_g000001

serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0033028.1
Physical Location & Seq
Reverse (-)
2 .. 1302
1301 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0033028.1_g000001.1.cds

Sequence Viewer

Length: 693 bp
atgagtgccaaagagtgtgagcaggagtgcctaagaaattgttcttgcaccgcatatttgagcactgaaaatgaagggcgtgttgattgcttgacatggtatgatgacttgatggacattaaaatttacacagagattggacaagatctctacgttcgtatgaatgcgaccgtgttagcggcaaatgccagaagatcagaaggtttcttggaaaggaggggtatgctggctattccaatactgtctgctgtgctagcattgagaatacttgtttattgtctatgcatagactttgtggaggcagaggagcttgtggaaaaacagagacaccctgaattgcaatttttcgatcttgacacaatagtcgcagcaacagaccacttctctcgtgtcaatgaacttggccatggtggatttggctctgtttataagggtcagctaccaaatgaacagaaagttgctgtgaaaagattgtcccaaacttcaggacaagggatcgaagaattcaaaaatgaagttgcacttatagcaagacttcaacacaggaatcttgtgaaacttttaggctgttgtataaagggagaagaaaggatgttagtgctagaatacatgcctaacaaaagcttgaactcctttctttttgataacacaagacggtccttcttggattgggaaaagcgctttgaaattatc
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

231

Amino Acids

26.52

Weight (kDa)

5.39

Isoelectric Point (pI)

58.32

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000112)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g03320 FvH4_3g03322 FvH4_3g03323 FvH4_3g03340 FvH4_3g03350 FvH4_3g03351 FvH4_3g03370 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g06140 FvH4_6g00257 FvH4_6g00257 FvH4_6g00270 FvH4_6g00300 FvH4_6g20800 FvH4_6g20800 FvH4_6g20800 FvH4_6g20800 FvH4_6g20800
malus_domestica MD05G1232700.v1.1 MD05G1327700.v1.1 MD05G1327800.v1.1 MD05G1327900.v1.1 MD05G1328000.v1.1 MD05G1328200.v1.1 MD05G1328300.v1.1 MD05G1328500.v1.1 MD05G1332000.v1.1 MD05G1332100.v1.1 MD10G1307600.v1.1 MD10G1307800.v1.1
prunus_persica Prupe.4G031900_v2.0.a1 Prupe.4G032000_v2.0.a1 Prupe.4G032000_v2.0.a1 Prupe.4G032100_v2.0.a1 Prupe.4G032200_v2.0.a1 Prupe.4G032200_v2.0.a1 Prupe.4G032200_v2.0.a1
pyrus_communis pycom05g30180 pycom05g30190 pycom05g30200 pycom05g30210 pycom10g25920 pycom10g25930
rosa_chinensis RchiOBHm_Chr2g0130831 RchiOBHm_Chr2g0132531 RchiOBHm_Chr2g0132541 RchiOBHm_Chr3g0455681 RchiOBHm_Chr3g0476681 RchiOBHm_Chr3g0476761 RchiOBHm_Chr3g0476771 RchiOBHm_Chr3g0476791 RchiOBHm_Chr3g0476801 RchiOBHm_Chr3g0476811 RchiOBHm_Chr4g0413551 RchiOBHm_Chr4g0413561 RchiOBHm_Chr5g0002911 RchiOBHm_Chr5g0005071 RchiOBHm_Chr5g0005101 RchiOBHm_Chr5g0005111 RchiOBHm_Chr5g0005121 RchiOBHm_Chr5g0005131 RchiOBHm_Chr5g0005141 RchiOBHm_Chr5g0005161 RchiOBHm_Chr5g0005171 RchiOBHm_Chr5g0006341 RchiOBHm_Chr5g0046161 RchiOBHm_Chr5g0046171 RchiOBHm_Chr5g0046181 RchiOBHm_Chr5g0046221 RchiOBHm_Chr5g0046231 RchiOBHm_Chr7g0224061 RchiOBHm_Chr7g0224081 RchiOBHm_Chr7g0224101 RchiOBHm_Chr7g0224111 RchiOBHm_Chr7g0224121
rosa_laevigata RLG00000010193 RLG00000019146 RLG00000019148 RLG00000019149 RLG00000019150 RLG00000023750 RLG00000023751 RLG00000023753 RLG00000029486 RLG00000031068 RLG00000031069 RLG00000031284 RLG00000031285 RLG00000031286 RLG00000031289 RLG00000031290 RLG00000031291 RLG00000031292 RLG00000031293 RLG00000031294 RLG00000031295 RLG00000031296 RLG00000031297 RLG00000031363 RLG00000032618 RLG00000032619
rosa_multiflora Rmu_co8147584.1_g000001 Rmu_co8205828.1_g000001 Rmu_co8373645.1_g000001 Rmu_co8407679.1_g000001 Rmu_co8452561.1_g000001 Rmu_sc0001035.1_g000076 Rmu_sc0001884.1_g000026 Rmu_sc0001884.1_g000027 Rmu_sc0001884.1_g000035 Rmu_sc0002157.1_g000026 Rmu_sc0002399.1_g000006 Rmu_sc0002399.1_g000007 Rmu_sc0002883.1_g000010 Rmu_sc0003629.1_g000014 Rmu_sc0003884.1_g000004 Rmu_sc0007865.1_g000005 Rmu_sc0008085.1_g000013 Rmu_sc0008085.1_g000014 Rmu_sc0008085.1_g000016 Rmu_sc0008085.1_g000018 Rmu_sc0008432.1_g000004 Rmu_sc0008714.1_g000002 Rmu_sc0009296.1_g000008 Rmu_sc0009296.1_g000009 Rmu_sc0009296.1_g000011 Rmu_sc0010281.1_g000001 Rmu_sc0010281.1_g000002 Rmu_sc0010714.1_g000011 Rmu_sc0010714.1_g000016 Rmu_sc0011169.1_g000001 Rmu_sc0011169.1_g000007 Rmu_sc0013603.1_g000006 Rmu_sc0020478.1_g000003 Rmu_sc0020478.1_g000007 Rmu_sc0025106.1_g000012 Rmu_sc0032709.1_g000001 Rmu_sc0033028.1_g000001
rosa_roxburghii Rroxscaffold_1G00069570 Rroxscaffold_1G00069610 Rroxscaffold_1G00069620 Rroxscaffold_1G00070480 Rroxscaffold_1G00070490 Rroxscaffold_1G00070500 Rroxscaffold_1G00070510 Rroxscaffold_1G00070520 Rroxscaffold_1G00070530 Rroxscaffold_1G00070540 Rroxscaffold_1G00070550 Rroxscaffold_1G00070590 Rroxscaffold_1G00072950 Rroxscaffold_1G00073080 Rroxscaffold_2G00111810 Rroxscaffold_2G00111820 Rroxscaffold_2G00113530 Rroxscaffold_2G00113870 Rroxscaffold_6G00405010 Rroxscaffold_6G00405020 Rroxscaffold_6G00423590 Rroxscaffold_6G00424100
rosa_rugosa Rorug02G0293200 Rorug02G0293300 Rorug02G0293400 Rorug02G0305900 Rorug02G0305900 Rorug03G0009100 Rorug03G0157000 Rorug03G0157000 Rorug03G0304900 Rorug04G0400500 Rorug04G0415200 Rorug04G0415300 Rorug04G0415400 Rorug04G0415500 Rorug04G0421100 Rorug05G0068000 Rorug05G0068100 Rorug05G0068200 Rorug05G0068500 Rorug05G0224600 Rorug05G0224700
rosa_samantha Rh2CG331700 Rh2CG341600 Rh2CG341700 Rh2DG381200 Rh3DG071200 Rh3DG233400 Rh3DG233500 Rh3DG233600 Rh5AG043100 Rh5CG026000 Rh5CG047700 Rh5CG047800 Rh5CG047900 Rh5CG048000 Rh5CG048100 Rh5CG048300 Rh5CG056500 Rh5CG340500 Rh5CG340700 Rh5CG340800 Rh7AG365000
rosa_wichuraiana Rw0G002360 Rw0G002370 Rw0G012520 Rw0G018230 Rw0G019190 Rw2G027480 Rw2G029150 Rw3G005520 Rw3G005880 Rw3G005890 Rw3G018840 Rw3G018850 Rw3G018870 Rw3G018880 Rw3G020740 Rw5G002190 Rw5G004180 Rw5G004190 Rw5G004890 Rw5G013960 Rw5G014000 Rw5G028610 Rw7G030910 Rw7G030920

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 429
AasI GACNNNNNNGTC 1 cut(s) 362
AciI CCGC 2 cut(s) 51, 179
AclWI GGATC 1 cut(s) 503
AcoI YGGCCR 1 cut(s) 403
AcsI RAATTY 2 cut(s) 123, 503
AcuI CTGAAG 1 cut(s) 468
AfeI AGCGCT 1 cut(s) 680
AgsI TTSAA 4 cut(s) 508, 539, 628, 686
AluBI AGCT 3 cut(s) 310, 439, 624
AluI AGCT 3 cut(s) 310, 439, 624
Alw21I GWGCWC 1 cut(s) 65
Alw26I GTCTC 1 cut(s) 319
AlwI GGATC 1 cut(s) 503
Aor51HI AGCGCT 1 cut(s) 680
AoxI GGCC 1 cut(s) 403
ApeKI GCWGC 1 cut(s) 368
ApoI RAATTY 2 cut(s) 123, 503
Asp700I GAANNNNTTC 1 cut(s) 40
AspLEI GCGC 1 cut(s) 681
AspS9I GGNCC 1 cut(s) 657
AsuNHI GCTAGC 1 cut(s) 253
AvaII GGWCC 1 cut(s) 657
BalI TGGCCA 1 cut(s) 405
BauI CACGAG 1 cut(s) 387
Bbv12I GWGCWC 1 cut(s) 65
BbvI GCAGC 1 cut(s) 380
BccI CCATC 1 cut(s) 106
BcoDI GTCTC 1 cut(s) 319
BfaI CTAG 2 cut(s) 254, 602
BfoI RGCGCY 1 cut(s) 682
BglII AGATCT 1 cut(s) 145
BisI GCNGC 2 cut(s) 180, 369
BlsI GCNGC 2 cut(s) 181, 370
Bme18I GGWCC 1 cut(s) 657
BmgT120I GGNCC 1 cut(s) 657
BmtI GCTAGC 1 cut(s) 257
BsaJI CCNNGG 1 cut(s) 406
BseDI CCNNGG 1 cut(s) 406
BseGI GGATG 1 cut(s) 597
BseRI GAGGAG 1 cut(s) 320
BseXI GCAGC 1 cut(s) 380
Bsh1285I CGRYCG 1 cut(s) 171
BshFI GGCC 1 cut(s) 405
BsiEI CGRYCG 1 cut(s) 171
BsiHKAI GWGCWC 1 cut(s) 65
BslFI GGGAC 1 cut(s) 460
BsmAI GTCTC 1 cut(s) 319
BsmFI GGGAC 1 cut(s) 460
BsmI GAATGC 1 cut(s) 169
BsnI GGCC 1 cut(s) 405
Bsp1286I GDGCHC 1 cut(s) 65
Bsp143I GATC 4 cut(s) 145, 194, 349, 495
Bsp19I CCATGG 1 cut(s) 406
BspACI CCGC 2 cut(s) 51, 179
BspANI GGCC 1 cut(s) 405
BspOI GCTAGC 1 cut(s) 257
BspPI GGATC 1 cut(s) 503
BssECI CCNNGG 1 cut(s) 406
BssMI GATC 4 cut(s) 145, 194, 349, 495
BssSI CACGAG 1 cut(s) 387
BssT1I CCWWGG 1 cut(s) 406
Bst2BI CACGAG 1 cut(s) 387
Bst4CI ACNGT 3 cut(s) 172, 243, 657
BstC8I GCNNGC 2 cut(s) 228, 255
BstDEI CTNAG 1 cut(s) 32
BstDSI CCRYGG 1 cut(s) 406
BstF5I GGATG 1 cut(s) 597
BstH2I RGCGCY 1 cut(s) 682
BstHHI GCGC 1 cut(s) 681
BstKTI GATC 4 cut(s) 148, 197, 352, 498
BstMAI GTCTC 1 cut(s) 319
BstMBI GATC 4 cut(s) 145, 194, 349, 495
BstMCI CGRYCG 1 cut(s) 171
BstMWI GCNNNNNNNGC 3 cut(s) 185, 254, 527
BstNSI RCATGY 1 cut(s) 613
BstV1I GCAGC 1 cut(s) 380
BstX2I RGATCY 1 cut(s) 145
BstYI RGATCY 1 cut(s) 145
BsuRI GGCC 1 cut(s) 405
BtgI CCRYGG 1 cut(s) 406
BtsCI GGATG 1 cut(s) 597
BtsIMutI CAGTG 1 cut(s) 63
Cac8I GCNNGC 2 cut(s) 228, 255
CfoI GCGC 1 cut(s) 681
Cfr13I GGNCC 1 cut(s) 657
CviAII CATG 3 cut(s) 96, 407, 610
CviJI RGCY 7 cut(s) 230, 310, 405, 420, 439, 567, 624
CviKI_1 RGCY 7 cut(s) 230, 310, 405, 420, 439, 567, 624
DdeI CTNAG 1 cut(s) 32
DpnI GATC 4 cut(s) 147, 196, 351, 497
DpnII GATC 4 cut(s) 145, 194, 349, 495
DrdI GACNNNNNNGTC 1 cut(s) 362
DseDI GACNNNNNNGTC 1 cut(s) 362
EaeI YGGCCR 1 cut(s) 403
Eco130I CCWWGG 1 cut(s) 406
Eco47I GGWCC 1 cut(s) 657
Eco47III AGCGCT 1 cut(s) 680
Eco57I CTGAAG 1 cut(s) 468
EcoRI GAATTC 1 cut(s) 503
EcoT14I CCWWGG 1 cut(s) 406
EcoT22I ATGCAT 1 cut(s) 287
ErhI CCWWGG 1 cut(s) 406
FaeI CATG 3 cut(s) 99, 410, 613
FalI AAGNNNNNCTT 2 cut(s) 507, 539
FaqI GGGAC 1 cut(s) 460
FatI CATG 3 cut(s) 95, 406, 609
Fnu4HI GCNGC 2 cut(s) 180, 369
FokI GGATG 1 cut(s) 604
Fsp4HI GCNGC 2 cut(s) 180, 369
FspBI CTAG 2 cut(s) 254, 602
GlaI GCGC 1 cut(s) 680
GluI GCNGC 2 cut(s) 180, 369
HaeII RGCGCY 1 cut(s) 682
HaeIII GGCC 1 cut(s) 405
HhaI GCGC 1 cut(s) 681
Hin1II CATG 3 cut(s) 99, 410, 613
Hin6I GCGC 1 cut(s) 679
HinP1I GCGC 1 cut(s) 679
HindIII AAGCTT 1 cut(s) 622
HinfI GANTC 1 cut(s) 547
Hpy188I TCNGA 1 cut(s) 199
Hpy188III TCNNGA 2 cut(s) 353, 486
HpyAV CCTTC 3 cut(s) 68, 194, 670
HpyCH4III ACNGT 3 cut(s) 172, 243, 657
HpyCH4IV ACGT 1 cut(s) 153
HpyCH4V TGCA 4 cut(s) 48, 285, 340, 521
HpyF10VI GCNNNNNNNGC 3 cut(s) 185, 254, 527
HpyF3I CTNAG 1 cut(s) 32
HpySE526I ACGT 1 cut(s) 153
Hsp92II CATG 3 cut(s) 99, 410, 613
HspAI GCGC 1 cut(s) 679
Kzo9I GATC 4 cut(s) 145, 194, 349, 495
LmnI GCTCC 1 cut(s) 307
LpnPI CCDG 6 cut(s) 8, 202, 212, 345, 471, 529
Lsp1109I GCAGC 1 cut(s) 380
MaeI CTAG 2 cut(s) 254, 602
MaeII ACGT 1 cut(s) 153
MalI GATC 4 cut(s) 147, 196, 351, 497
MboI GATC 4 cut(s) 145, 194, 349, 495
MboII GAAGA 3 cut(s) 204, 512, 596
MflI RGATCY 1 cut(s) 145
MhlI GDGCHC 1 cut(s) 65
MlsI TGGCCA 1 cut(s) 405
MluCI AATT 6 cut(s) 37, 123, 335, 341, 503, 687
MluNI TGGCCA 1 cut(s) 405
MnlI CCTC 3 cut(s) 210, 292, 298
Mox20I TGGCCA 1 cut(s) 405
Mph1103I ATGCAT 1 cut(s) 287
MroXI GAANNNNTTC 1 cut(s) 40
MscI TGGCCA 1 cut(s) 405
MseI TTAA 1 cut(s) 120
Msp20I TGGCCA 1 cut(s) 405
Mva1269I GAATGC 1 cut(s) 169
MwoI GCNNNNNNNGC 3 cut(s) 185, 254, 527
NcoI CCATGG 1 cut(s) 406
NdeII GATC 4 cut(s) 145, 194, 349, 495
NheI GCTAGC 1 cut(s) 253
NlaIII CATG 3 cut(s) 99, 410, 613
NsiI ATGCAT 1 cut(s) 287
NspI RCATGY 1 cut(s) 613
PctI GAATGC 1 cut(s) 169
PdmI GAANNNNTTC 1 cut(s) 40
PfeI GAWTC 1 cut(s) 547
PkrI GCNGC 2 cut(s) 181, 370
PsiI TTATAA 1 cut(s) 429
PspPI GGNCC 1 cut(s) 657
PsuI RGATCY 1 cut(s) 145
SaqAI TTAA 1 cut(s) 120
SatI GCNGC 2 cut(s) 180, 369
Sau3AI GATC 4 cut(s) 145, 194, 349, 495
Sau96I GGNCC 1 cut(s) 657
SduI GDGCHC 1 cut(s) 65
SetI ASST 5 cut(s) 156, 205, 312, 441, 626
SinI GGWCC 1 cut(s) 657
Sse9I AATT 6 cut(s) 37, 123, 335, 341, 503, 687
SsiI CCGC 2 cut(s) 51, 179
SspMI CTAG 2 cut(s) 254, 602
StyI CCWWGG 1 cut(s) 406
TaaI ACNGT 3 cut(s) 172, 243, 657
TaiI ACGT 1 cut(s) 156
TaqI TCGA 2 cut(s) 348, 498
TasI AATT 6 cut(s) 37, 123, 335, 341, 503, 687
TauI GCSGC 1 cut(s) 182
TfiI GAWTC 1 cut(s) 547
Tru1I TTAA 1 cut(s) 120
Tru9I TTAA 1 cut(s) 120
TscAI CASTG 1 cut(s) 70
TseI GCWGC 1 cut(s) 368
TspDTI ATGAA 5 cut(s) 87, 176, 411, 462, 528
TspRI CASTG 1 cut(s) 70
VpaK11BI GGWCC 1 cut(s) 657
XapI RAATTY 2 cut(s) 123, 503
XceI RCATGY 1 cut(s) 613
XcmI CCANNNNNNNNNTGG 1 cut(s) 413
XmnI GAANNNNTTC 1 cut(s) 40
XspI CTAG 2 cut(s) 254, 602
Zsp2I ATGCAT 1 cut(s) 287
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.