MD05G1232700.v1.1

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr05
Physical Location & Seq
Forward (+)
36553741 .. 36555155
1415 bp
Loading structure...
UTR
Exon/CDS
Intron
MD05G1232700.v1.1.491

Sequence Viewer

Length: 660 bp
ATGAAGAACTGCTCCTGCACGGCTTATACAAATTTGGATATCCGGGATGGAGGAACTGGGTGCTTGCTATGGTACGGTGATCTAATTAATATAAGATACATTGCTGAAAACGGGCAAGATATTTATATAAGAATGGCCGCAGCAGAACAAGGAAAACTGGGACACAACCAAAAGGAGGATCTGGAATTACCGTTATTTGACTTGATGACTATAGTTTCTGCAACTAGTAACTTTTCAATTGAAAACAAACTTGGTGAAGGTGGTTTCGGATCTGTCTTTAAGGGTACGATGGAAGATGGACAAGAAATCGCAGTGAAAAGGCTTTCAAAAAGTTCTAGACAAGGACTCGACGAGTTCAAGAATGAAGTTACACATATTGCCAAACTTCAGCACAGGAATCTAGTGAAGCTTCTTGGATGCTGCATTCAAGAAGACGAGATGATATTGATCTACGAGTTCATGCCCAACAAGAGTTTAGACTTCTTTATTTTTGATCAAAGAAGAAGGATGTTATTAGACTGGCCAAAGCGCTTTGAAATTATTAATGGGATAGCTCGAGGGCTCCTCTATCTTCATCAAGATTCTAGATTGAGAGTTATTCATAGAGATCTCAAAGCAAGTAACATTTTATTAGGCAGTGAATTTAACCCAAAAATCTGA

Protein Analysis

220

Amino Acids

25.07

Weight (kDa)

6.53

Isoelectric Point (pI)

46.31

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PAN_2 PF08276 2 - 31 4.1e-09 PAN-like domain
PK_Tyr_Ser-Thr PF07714 79 - 218 3.5e-29 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 79 - 218 1.9e-27 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000112)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g03320 FvH4_3g03322 FvH4_3g03323 FvH4_3g03340 FvH4_3g03350 FvH4_3g03351 FvH4_3g03370 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g06140 FvH4_6g00257 FvH4_6g00257 FvH4_6g00270 FvH4_6g00300 FvH4_6g20800 FvH4_6g20800 FvH4_6g20800 FvH4_6g20800 FvH4_6g20800
malus_domestica MD05G1232700.v1.1 MD05G1327700.v1.1 MD05G1327800.v1.1 MD05G1327900.v1.1 MD05G1328000.v1.1 MD05G1328200.v1.1 MD05G1328300.v1.1 MD05G1328500.v1.1 MD05G1332000.v1.1 MD05G1332100.v1.1 MD10G1307600.v1.1 MD10G1307800.v1.1
prunus_persica Prupe.4G031900_v2.0.a1 Prupe.4G032000_v2.0.a1 Prupe.4G032000_v2.0.a1 Prupe.4G032100_v2.0.a1 Prupe.4G032200_v2.0.a1 Prupe.4G032200_v2.0.a1 Prupe.4G032200_v2.0.a1
pyrus_communis pycom05g30180 pycom05g30190 pycom05g30200 pycom05g30210 pycom10g25920 pycom10g25930
rosa_chinensis RchiOBHm_Chr2g0130831 RchiOBHm_Chr2g0132531 RchiOBHm_Chr2g0132541 RchiOBHm_Chr3g0455681 RchiOBHm_Chr3g0476681 RchiOBHm_Chr3g0476761 RchiOBHm_Chr3g0476771 RchiOBHm_Chr3g0476791 RchiOBHm_Chr3g0476801 RchiOBHm_Chr3g0476811 RchiOBHm_Chr4g0413551 RchiOBHm_Chr4g0413561 RchiOBHm_Chr5g0002911 RchiOBHm_Chr5g0005071 RchiOBHm_Chr5g0005101 RchiOBHm_Chr5g0005111 RchiOBHm_Chr5g0005121 RchiOBHm_Chr5g0005131 RchiOBHm_Chr5g0005141 RchiOBHm_Chr5g0005161 RchiOBHm_Chr5g0005171 RchiOBHm_Chr5g0006341 RchiOBHm_Chr5g0046161 RchiOBHm_Chr5g0046171 RchiOBHm_Chr5g0046181 RchiOBHm_Chr5g0046221 RchiOBHm_Chr5g0046231 RchiOBHm_Chr7g0224061 RchiOBHm_Chr7g0224081 RchiOBHm_Chr7g0224101 RchiOBHm_Chr7g0224111 RchiOBHm_Chr7g0224121
rosa_laevigata RLG00000010193 RLG00000019146 RLG00000019148 RLG00000019149 RLG00000019150 RLG00000023750 RLG00000023751 RLG00000023753 RLG00000029486 RLG00000031068 RLG00000031069 RLG00000031284 RLG00000031285 RLG00000031286 RLG00000031289 RLG00000031290 RLG00000031291 RLG00000031292 RLG00000031293 RLG00000031294 RLG00000031295 RLG00000031296 RLG00000031297 RLG00000031363 RLG00000032618 RLG00000032619
rosa_multiflora Rmu_co8147584.1_g000001 Rmu_co8205828.1_g000001 Rmu_co8373645.1_g000001 Rmu_co8407679.1_g000001 Rmu_co8452561.1_g000001 Rmu_sc0001035.1_g000076 Rmu_sc0001884.1_g000026 Rmu_sc0001884.1_g000027 Rmu_sc0001884.1_g000035 Rmu_sc0002157.1_g000026 Rmu_sc0002399.1_g000006 Rmu_sc0002399.1_g000007 Rmu_sc0002883.1_g000010 Rmu_sc0003629.1_g000014 Rmu_sc0003884.1_g000004 Rmu_sc0007865.1_g000005 Rmu_sc0008085.1_g000013 Rmu_sc0008085.1_g000014 Rmu_sc0008085.1_g000016 Rmu_sc0008085.1_g000018 Rmu_sc0008432.1_g000004 Rmu_sc0008714.1_g000002 Rmu_sc0009296.1_g000008 Rmu_sc0009296.1_g000009 Rmu_sc0009296.1_g000011 Rmu_sc0010281.1_g000001 Rmu_sc0010281.1_g000002 Rmu_sc0010714.1_g000011 Rmu_sc0010714.1_g000016 Rmu_sc0011169.1_g000001 Rmu_sc0011169.1_g000007 Rmu_sc0013603.1_g000006 Rmu_sc0020478.1_g000003 Rmu_sc0020478.1_g000007 Rmu_sc0025106.1_g000012 Rmu_sc0032709.1_g000001 Rmu_sc0033028.1_g000001
rosa_roxburghii Rroxscaffold_1G00069570 Rroxscaffold_1G00069610 Rroxscaffold_1G00069620 Rroxscaffold_1G00070480 Rroxscaffold_1G00070490 Rroxscaffold_1G00070500 Rroxscaffold_1G00070510 Rroxscaffold_1G00070520 Rroxscaffold_1G00070530 Rroxscaffold_1G00070540 Rroxscaffold_1G00070550 Rroxscaffold_1G00070590 Rroxscaffold_1G00072950 Rroxscaffold_1G00073080 Rroxscaffold_2G00111810 Rroxscaffold_2G00111820 Rroxscaffold_2G00113530 Rroxscaffold_2G00113870 Rroxscaffold_6G00405010 Rroxscaffold_6G00405020 Rroxscaffold_6G00423590 Rroxscaffold_6G00424100
rosa_rugosa Rorug02G0293200 Rorug02G0293300 Rorug02G0293400 Rorug02G0305900 Rorug02G0305900 Rorug03G0009100 Rorug03G0157000 Rorug03G0157000 Rorug03G0304900 Rorug04G0400500 Rorug04G0415200 Rorug04G0415300 Rorug04G0415400 Rorug04G0415500 Rorug04G0421100 Rorug05G0068000 Rorug05G0068100 Rorug05G0068200 Rorug05G0068500 Rorug05G0224600 Rorug05G0224700
rosa_samantha Rh2CG331700 Rh2CG341600 Rh2CG341700 Rh2DG381200 Rh3DG071200 Rh3DG233400 Rh3DG233500 Rh3DG233600 Rh5AG043100 Rh5CG026000 Rh5CG047700 Rh5CG047800 Rh5CG047900 Rh5CG048000 Rh5CG048100 Rh5CG048300 Rh5CG056500 Rh5CG340500 Rh5CG340700 Rh5CG340800 Rh7AG365000
rosa_wichuraiana Rw0G002360 Rw0G002370 Rw0G012520 Rw0G018230 Rw0G019190 Rw2G027480 Rw2G029150 Rw3G005520 Rw3G005880 Rw3G005890 Rw3G018840 Rw3G018850 Rw3G018870 Rw3G018880 Rw3G020740 Rw5G002190 Rw5G004180 Rw5G004190 Rw5G004890 Rw5G013960 Rw5G014000 Rw5G028610 Rw7G030910 Rw7G030920

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 138
AclWI GGATC 2 cut(s) 186, 277
AcoI YGGCCR 2 cut(s) 135, 521
AcsI RAATTY 2 cut(s) 31, 641
AcuI CTGAAG 1 cut(s) 371
AfaI GTAC 2 cut(s) 74, 286
AfeI AGCGCT 1 cut(s) 530
AfiI CCNNNNNNNGG 1 cut(s) 175
AgsI TTSAA 6 cut(s) 237, 242, 327, 358, 428, 536
AhlI ACTAGT 1 cut(s) 224
AjuI GAANNNNNNNTTGG 2 cut(s) 234, 266
AluBI AGCT 2 cut(s) 409, 554
AluI AGCT 2 cut(s) 409, 554
AlwI GGATC 2 cut(s) 186, 277
Ama87I CYCGRG 1 cut(s) 555
Aor51HI AGCGCT 1 cut(s) 530
AoxI GGCC 2 cut(s) 135, 521
ApeKI GCWGC 2 cut(s) 140, 420
ApoI RAATTY 2 cut(s) 31, 641
AseI ATTAAT 2 cut(s) 87, 543
AspLEI GCGC 1 cut(s) 531
AsuC2I CCSGG 1 cut(s) 44
AsuHPI GGTGA 2 cut(s) 89, 266
AvaI CYCGRG 1 cut(s) 555
BalI TGGCCA 1 cut(s) 523
BanII GRGCYC 1 cut(s) 564
BbsI GAAGAC 1 cut(s) 438
BbvI GCAGC 2 cut(s) 152, 407
BccI CCATC 3 cut(s) 41, 283, 290
BceAI ACGGC 1 cut(s) 36
BclI TGATCA 1 cut(s) 493
BcnI CCSGG 1 cut(s) 44
BcuI ACTAGT 1 cut(s) 224
BfaI CTAG 4 cut(s) 225, 336, 401, 585
BfmI CTRYAG 1 cut(s) 210
BfoI RGCGCY 1 cut(s) 532
BglII AGATCT 1 cut(s) 607
BisI GCNGC 3 cut(s) 138, 141, 421
BlsI GCNGC 3 cut(s) 139, 142, 422
Bme1390I CCNGG 1 cut(s) 44
BmeT110I CYCGRG 1 cut(s) 555
BmiI GGNNCC 1 cut(s) 563
BmrFI CCNGG 1 cut(s) 44
BmrI ACTGGG 2 cut(s) 66, 167
BmsI GCATC 1 cut(s) 407
BmuI ACTGGG 2 cut(s) 66, 167
BpiI GAAGAC 1 cut(s) 438
BplI GAGNNNNNCTC 2 cut(s) 549, 581
BpuMI CCSGG 1 cut(s) 44
BsaBI GATNNNNATC 1 cut(s) 446
Bsc4I CCNNNNNNNGG 1 cut(s) 175
Bse1I ACTGG 3 cut(s) 61, 162, 524
Bse3DI GCAATG 1 cut(s) 99
Bse8I GATNNNNATC 1 cut(s) 446
BseGI GGATG 3 cut(s) 52, 422, 513
BseJI GATNNNNATC 1 cut(s) 446
BseLI CCNNNNNNNGG 1 cut(s) 175
BseMI GCAATG 1 cut(s) 99
BseNI ACTGG 3 cut(s) 61, 162, 524
BseRI GAGGAG 1 cut(s) 554
BseXI GCAGC 2 cut(s) 152, 407
BshFI GGCC 2 cut(s) 137, 523
BsiHKCI CYCGRG 1 cut(s) 555
BsiSI CCGG 1 cut(s) 43
BslFI GGGAC 1 cut(s) 174
BslI CCNNNNNNNGG 1 cut(s) 175
BsmFI GGGAC 1 cut(s) 174
BsmI GAATGC 1 cut(s) 423
BsnI GGCC 2 cut(s) 137, 523
BsoBI CYCGRG 1 cut(s) 555
Bsp1286I GDGCHC 1 cut(s) 564
Bsp143I GATC 6 cut(s) 79, 178, 269, 447, 493, 607
BspACI CCGC 1 cut(s) 138
BspANI GGCC 2 cut(s) 137, 523
BspLI GGNNCC 1 cut(s) 563
BspPI GGATC 2 cut(s) 186, 277
BsrDI GCAATG 1 cut(s) 99
BsrI ACTGG 3 cut(s) 61, 162, 524
BssMI GATC 6 cut(s) 79, 178, 269, 447, 493, 607
Bst4CI ACNGT 2 cut(s) 77, 192
BstC8I GCNNGC 1 cut(s) 65
BstF5I GGATG 3 cut(s) 52, 422, 513
BstH2I RGCGCY 1 cut(s) 532
BstHHI GCGC 1 cut(s) 531
BstKTI GATC 6 cut(s) 82, 181, 272, 450, 496, 610
BstMBI GATC 6 cut(s) 79, 178, 269, 447, 493, 607
BstSCI CCNGG 1 cut(s) 42
BstSFI CTRYAG 1 cut(s) 210
BstV1I GCAGC 2 cut(s) 152, 407
BstV2I GAAGAC 1 cut(s) 438
BstX2I RGATCY 3 cut(s) 178, 269, 607
BstYI RGATCY 3 cut(s) 178, 269, 607
BsuRI GGCC 2 cut(s) 137, 523
BtsCI GGATG 3 cut(s) 52, 422, 513
BtsI GCAGTG 2 cut(s) 318, 643
BtsIMutI CAGTG 2 cut(s) 318, 643
Cac8I GCNNGC 1 cut(s) 65
CfoI GCGC 1 cut(s) 531
Csp6I GTAC 2 cut(s) 73, 285
CviAII CATG 1 cut(s) 460
CviJI RGCY 7 cut(s) 23, 137, 322, 409, 523, 554, 562
CviKI_1 RGCY 7 cut(s) 23, 137, 322, 409, 523, 554, 562
CviQI GTAC 2 cut(s) 73, 285
DpnI GATC 6 cut(s) 81, 180, 271, 449, 495, 609
DpnII GATC 6 cut(s) 79, 178, 269, 447, 493, 607
EaeI YGGCCR 2 cut(s) 135, 521
Eco24I GRGCYC 1 cut(s) 564
Eco32I GATATC 1 cut(s) 40
Eco47III AGCGCT 1 cut(s) 530
Eco57I CTGAAG 1 cut(s) 371
Eco88I CYCGRG 1 cut(s) 555
EcoRV GATATC 1 cut(s) 40
EcoT38I GRGCYC 1 cut(s) 564
FaeI CATG 1 cut(s) 463
FaiI YATR 9 cut(s) 27, 70, 92, 126, 128, 212, 375, 461, 603
FaqI GGGAC 1 cut(s) 174
FatI CATG 1 cut(s) 459
FbaI TGATCA 1 cut(s) 493
Fnu4HI GCNGC 3 cut(s) 138, 141, 421
FokI GGATG 3 cut(s) 59, 429, 520
FriOI GRGCYC 1 cut(s) 564
Fsp4HI GCNGC 3 cut(s) 138, 141, 421
FspBI CTAG 4 cut(s) 225, 336, 401, 585
GlaI GCGC 1 cut(s) 530
GluI GCNGC 3 cut(s) 138, 141, 421
HaeII RGCGCY 1 cut(s) 532
HaeIII GGCC 2 cut(s) 137, 523
HapII CCGG 1 cut(s) 43
HhaI GCGC 1 cut(s) 531
Hin1II CATG 1 cut(s) 463
Hin6I GCGC 1 cut(s) 529
HinP1I GCGC 1 cut(s) 529
HindIII AAGCTT 1 cut(s) 407
HinfI GANTC 3 cut(s) 345, 397, 581
HpaII CCGG 1 cut(s) 43
HphI GGTGA 2 cut(s) 89, 266
Hpy188I TCNGA 2 cut(s) 269, 659
Hpy188III TCNNGA 6 cut(s) 182, 336, 358, 428, 578, 585
Hpy99I CGWCG 1 cut(s) 353
HpyAV CCTTC 2 cut(s) 251, 498
HpyCH4III ACNGT 2 cut(s) 77, 192
HpyCH4V TGCA 3 cut(s) 18, 221, 423
Hsp92II CATG 1 cut(s) 463
HspAI GCGC 1 cut(s) 529
Ksp22I TGATCA 1 cut(s) 493
Kzo9I GATC 6 cut(s) 79, 178, 269, 447, 493, 607
LmnI GCTCC 2 cut(s) 17, 567
LpnPI CCDG 7 cut(s) 28, 42, 56, 143, 167, 379, 505
Lsp1109I GCAGC 2 cut(s) 152, 407
LweI GCATC 1 cut(s) 407
MaeI CTAG 4 cut(s) 225, 336, 401, 585
MaeIII GTNAC 3 cut(s) 227, 367, 620
MalI GATC 6 cut(s) 81, 180, 271, 449, 495, 609
MboI GATC 6 cut(s) 79, 178, 269, 447, 493, 607
MboII GAAGA 5 cut(s) 16, 305, 443, 513, 563
MfeI CAATTG 1 cut(s) 237
MflI RGATCY 3 cut(s) 178, 269, 607
MhlI GDGCHC 1 cut(s) 564
MlsI TGGCCA 1 cut(s) 523
MluCI AATT 6 cut(s) 31, 84, 185, 237, 537, 641
MluNI TGGCCA 1 cut(s) 523
MlyI GAGTC 1 cut(s) 339
MnlI CCTC 4 cut(s) 44, 169, 551, 575
Mox20I TGGCCA 1 cut(s) 523
MscI TGGCCA 1 cut(s) 523
MseI TTAA 4 cut(s) 87, 279, 543, 645
Msp20I TGGCCA 1 cut(s) 523
MspI CCGG 1 cut(s) 43
MspR9I CCNGG 1 cut(s) 44
MunI CAATTG 1 cut(s) 237
Mva1269I GAATGC 1 cut(s) 423
NciI CCSGG 1 cut(s) 44
NdeII GATC 6 cut(s) 79, 178, 269, 447, 493, 607
NlaIII CATG 1 cut(s) 463
NlaIV GGNNCC 1 cut(s) 563
PaeR7I CTCGAG 1 cut(s) 555
PctI GAATGC 1 cut(s) 423
PfeI GAWTC 2 cut(s) 397, 581
PfoI TCCNGGA 1 cut(s) 42
PkrI GCNGC 3 cut(s) 139, 142, 422
PleI GAGTC 1 cut(s) 339
PpsI GAGTC 1 cut(s) 339
PshBI ATTAAT 2 cut(s) 87, 543
PspN4I GGNNCC 1 cut(s) 563
PspXI VCTCGAGB 1 cut(s) 555
PsuI RGATCY 3 cut(s) 178, 269, 607
RsaI GTAC 2 cut(s) 74, 286
RsaNI GTAC 2 cut(s) 73, 285
SaqAI TTAA 4 cut(s) 87, 279, 543, 645
SatI GCNGC 3 cut(s) 138, 141, 421
Sau3AI GATC 6 cut(s) 79, 178, 269, 447, 493, 607
SchI GAGTC 1 cut(s) 339
ScrFI CCNGG 1 cut(s) 44
SduI GDGCHC 1 cut(s) 564
SetI ASST 3 cut(s) 262, 411, 556
SfaNI GCATC 1 cut(s) 407
SfcI CTRYAG 1 cut(s) 210
Sfr274I CTCGAG 1 cut(s) 555
SlaI CTCGAG 1 cut(s) 555
SmlI CTYRAG 1 cut(s) 555
SmoI CTYRAG 1 cut(s) 555
SpeI ACTAGT 1 cut(s) 224
Sse9I AATT 6 cut(s) 31, 84, 185, 237, 537, 641
SsiI CCGC 1 cut(s) 138
SspMI CTAG 4 cut(s) 225, 336, 401, 585
StyD4I CCNGG 1 cut(s) 42
TaaI ACNGT 2 cut(s) 77, 192
TaqI TCGA 2 cut(s) 348, 556
TasI AATT 6 cut(s) 31, 84, 185, 237, 537, 641
TauI GCSGC 1 cut(s) 140
TfiI GAWTC 2 cut(s) 397, 581
Tru1I TTAA 4 cut(s) 87, 279, 543, 645
Tru9I TTAA 4 cut(s) 87, 279, 543, 645
TscAI CASTG 2 cut(s) 318, 643
TseI GCWGC 2 cut(s) 140, 420
TspDTI ATGAA 5 cut(s) 17, 378, 448, 563, 590
TspRI CASTG 2 cut(s) 318, 643
VspI ATTAAT 2 cut(s) 87, 543
XapI RAATTY 2 cut(s) 31, 641
XbaI TCTAGA 2 cut(s) 335, 584
XhoI CTCGAG 1 cut(s) 555
XspI CTAG 4 cut(s) 225, 336, 401, 585
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.