Rmu_sc0009296.1_g000009

serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0009296.1
OG0000112
Physical Location & Seq
Forward (+)
27476 .. 30694
3219 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0009296.1_g000009.1.cds

Sequence Viewer

Length: 2421 bp
atgctgttgaaatctctgcttctcttcctcctcttccaagtttgcacttccagggacaccttgagatcgaacgaagaactcaaggatgatgatggtgggcttctggtgtccaaagaaagcagctttgagttgcgtttcttcagccctggaaattctagcaaccgctatgttgggatttggtattctcaatctaaagtatctgaaaaaacagtggtgtggatcgcaaacagagacaaccccattaatgatacctctggagttttcaccataaacaggtatggagacctagttctttatgcttataacatggagaccagtcctatttggtctgctgatgtgccttattcagtcaaaaacactggcaccttatctgcatatgtacagctgttggatacaggaaacttagttatgttccagaatgatagagatggaatctttgcatggcaaagttttgattatcctacagatactttaatccctggtatgaaagttgggatgaatcggaaaactgggctagaatgggttttaacatcttggaagtcaatagatgaccctggaactggggactatacctttaggcttcataattggagccacgttgtcacaccccagtattttatttataaaggtttgtctaagtattggcgaggtgatacagagccttggcctaattcgatccgaaatgcagaggaaatgtcttttttccttacctataacaccaataaacttacaataatgaagttgatgttttctgggctacatcagcacttggtatggagtgatgctgaccaccaatggaaggagttgtggtcttcaccgaaatacaggtgtgactggtatggacattgtggtgccaacagcaaatgtagccttgacagtggtaatctgttcgagtgtgagtgtctaccggggtatgaaccaaaatctataaatggttggaatgggagagatgggtcagatggatgtgtgagtaaacgagtcaaagtgtcaaagtgtagaaatggagaagggtttgtgaaggtggaaagggtgaaagatccagacgcatcgagagcagcaatgttgaaaagaggtatgagtaccaaagagtgtgagcaggagtgcctaagaaattgttcttgcacggcatatatgaccaaaaagattgaaggggttattaattgcttgacatggtatgatgacttgatggacattttggtttacacagaggccggacgagatctgtatgttcgtgtggataaaatcgagttagctgagaatgccgcaaactccggattcttcaggaggggcatgcttgttattccaatactgtttgctctgctggccctagcactaataaatgtgcttgcctgttggttgcttaagaaaaaagggaagacaaaagtctttgtggatgtggatgaacttgaggaaagcaagagacacccggaattgcaatttttcgatctgaacacactagtagcagccacagataatttctctgatgttaataaacttggcgaaggtggttttggtggtgtttataagggtgagttaccaaatggacagaaggttgctgtgaaaaggctgtctagcagctcaggacaagggattggtgaattcaaaaatgaagttgaactgatagcaggacttcaacacaggaatcttgtgaagcttttaggttgttgtataaagggaggagaaaggatgctagtcctcgaatatatgccgaacaaaagcttggactcatttctttttgatgacactagaaggtccttcttagattggggaaggcgttttgagattatcaatggggttgctcgtgggcttttgtatcttcaccaagactcaagattaaggattattcatagggatctaaaaaccagcaatattcttctagatgatgagatgaccccaaaaatctcagatttcggcatggcaagaatattccatggggaccaacttcaggataacacaaagaaagttgttggaacatatggctatatgtcaccagagtatgcagtgtttgggagattctctacgaaatcggatgtgttcagttttgggattgtactattggagattgttagtggcaagagaaacaatggttcttatgaggagaattactccatgaacctgataggacatgtttggcatgtgtggaaagaaggaatagccttagatgttgtggattcatcgctacaatcatataagcatgatgaagtcttgagatgcattcaaattggactgttgtgcgtgcaagaagattccaaggaccgaccagccatgtcatccgttgtgttcatgttgagtggtgaggcatctcttccatctcctaagcagcctgcatttgtcttcagaagaaattccagcagtgctgctgattcaaaagaattatattctattaacgacttaacaataactattgtgggagctcgataa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
B_lectin DUF3403 PAN_2 Pkinase Pkinase_Tyr S_locus_glycop

Protein Analysis

806

Amino Acids

91.27

Weight (kDa)

6.44

Isoelectric Point (pI)

39.44

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000112)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g03320 FvH4_3g03322 FvH4_3g03323 FvH4_3g03340 FvH4_3g03350 FvH4_3g03351 FvH4_3g03370 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g06140 FvH4_6g00257 FvH4_6g00257 FvH4_6g00270 FvH4_6g00300 FvH4_6g20800 FvH4_6g20800 FvH4_6g20800 FvH4_6g20800 FvH4_6g20800
malus_domestica MD05G1232700.v1.1 MD05G1327700.v1.1 MD05G1327800.v1.1 MD05G1327900.v1.1 MD05G1328000.v1.1 MD05G1328200.v1.1 MD05G1328300.v1.1 MD05G1328500.v1.1 MD05G1332000.v1.1 MD05G1332100.v1.1 MD10G1307600.v1.1 MD10G1307800.v1.1
prunus_persica Prupe.4G031900_v2.0.a1 Prupe.4G032000_v2.0.a1 Prupe.4G032000_v2.0.a1 Prupe.4G032100_v2.0.a1 Prupe.4G032200_v2.0.a1 Prupe.4G032200_v2.0.a1 Prupe.4G032200_v2.0.a1
pyrus_communis pycom05g30180 pycom05g30190 pycom05g30200 pycom05g30210 pycom10g25920 pycom10g25930
rosa_chinensis RchiOBHm_Chr2g0130831 RchiOBHm_Chr2g0132531 RchiOBHm_Chr2g0132541 RchiOBHm_Chr3g0455681 RchiOBHm_Chr3g0476681 RchiOBHm_Chr3g0476761 RchiOBHm_Chr3g0476771 RchiOBHm_Chr3g0476791 RchiOBHm_Chr3g0476801 RchiOBHm_Chr3g0476811 RchiOBHm_Chr4g0413551 RchiOBHm_Chr4g0413561 RchiOBHm_Chr5g0002911 RchiOBHm_Chr5g0005071 RchiOBHm_Chr5g0005101 RchiOBHm_Chr5g0005111 RchiOBHm_Chr5g0005121 RchiOBHm_Chr5g0005131 RchiOBHm_Chr5g0005141 RchiOBHm_Chr5g0005161 RchiOBHm_Chr5g0005171 RchiOBHm_Chr5g0006341 RchiOBHm_Chr5g0046161 RchiOBHm_Chr5g0046171 RchiOBHm_Chr5g0046181 RchiOBHm_Chr5g0046221 RchiOBHm_Chr5g0046231 RchiOBHm_Chr7g0224061 RchiOBHm_Chr7g0224081 RchiOBHm_Chr7g0224101 RchiOBHm_Chr7g0224111 RchiOBHm_Chr7g0224121
rosa_laevigata RLG00000010193 RLG00000019146 RLG00000019148 RLG00000019149 RLG00000019150 RLG00000023750 RLG00000023751 RLG00000023753 RLG00000029486 RLG00000031068 RLG00000031069 RLG00000031284 RLG00000031285 RLG00000031286 RLG00000031289 RLG00000031290 RLG00000031291 RLG00000031292 RLG00000031293 RLG00000031294 RLG00000031295 RLG00000031296 RLG00000031297 RLG00000031363 RLG00000032618 RLG00000032619
rosa_multiflora Rmu_co8147584.1_g000001 Rmu_co8205828.1_g000001 Rmu_co8373645.1_g000001 Rmu_co8407679.1_g000001 Rmu_co8452561.1_g000001 Rmu_sc0001035.1_g000076 Rmu_sc0001884.1_g000026 Rmu_sc0001884.1_g000027 Rmu_sc0001884.1_g000035 Rmu_sc0002157.1_g000026 Rmu_sc0002399.1_g000006 Rmu_sc0002399.1_g000007 Rmu_sc0002883.1_g000010 Rmu_sc0003629.1_g000014 Rmu_sc0003884.1_g000004 Rmu_sc0007865.1_g000005 Rmu_sc0008085.1_g000013 Rmu_sc0008085.1_g000014 Rmu_sc0008085.1_g000016 Rmu_sc0008085.1_g000018 Rmu_sc0008432.1_g000004 Rmu_sc0008714.1_g000002 Rmu_sc0009296.1_g000008 Rmu_sc0009296.1_g000009 Rmu_sc0009296.1_g000011 Rmu_sc0010281.1_g000001 Rmu_sc0010281.1_g000002 Rmu_sc0010714.1_g000011 Rmu_sc0010714.1_g000016 Rmu_sc0011169.1_g000001 Rmu_sc0011169.1_g000007 Rmu_sc0013603.1_g000006 Rmu_sc0020478.1_g000003 Rmu_sc0020478.1_g000007 Rmu_sc0025106.1_g000012 Rmu_sc0032709.1_g000001 Rmu_sc0033028.1_g000001
rosa_roxburghii Rroxscaffold_1G00069570 Rroxscaffold_1G00069610 Rroxscaffold_1G00069620 Rroxscaffold_1G00070480 Rroxscaffold_1G00070490 Rroxscaffold_1G00070500 Rroxscaffold_1G00070510 Rroxscaffold_1G00070520 Rroxscaffold_1G00070530 Rroxscaffold_1G00070540 Rroxscaffold_1G00070550 Rroxscaffold_1G00070590 Rroxscaffold_1G00072950 Rroxscaffold_1G00073080 Rroxscaffold_2G00111810 Rroxscaffold_2G00111820 Rroxscaffold_2G00113530 Rroxscaffold_2G00113870 Rroxscaffold_6G00405010 Rroxscaffold_6G00405020 Rroxscaffold_6G00423590 Rroxscaffold_6G00424100
rosa_rugosa Rorug02G0293200 Rorug02G0293300 Rorug02G0293400 Rorug02G0305900 Rorug02G0305900 Rorug03G0009100 Rorug03G0157000 Rorug03G0157000 Rorug03G0304900 Rorug04G0400500 Rorug04G0415200 Rorug04G0415300 Rorug04G0415400 Rorug04G0415500 Rorug04G0421100 Rorug05G0068000 Rorug05G0068100 Rorug05G0068200 Rorug05G0068500 Rorug05G0224600 Rorug05G0224700
rosa_samantha Rh2CG331700 Rh2CG341600 Rh2CG341700 Rh2DG381200 Rh3DG071200 Rh3DG233400 Rh3DG233500 Rh3DG233600 Rh5AG043100 Rh5CG026000 Rh5CG047700 Rh5CG047800 Rh5CG047900 Rh5CG048000 Rh5CG048100 Rh5CG048300 Rh5CG056500 Rh5CG340500 Rh5CG340700 Rh5CG340800 Rh7AG365000
rosa_wichuraiana Rw0G002360 Rw0G002370 Rw0G012520 Rw0G018230 Rw0G019190 Rw2G027480 Rw2G029150 Rw3G005520 Rw3G005880 Rw3G005890 Rw3G018840 Rw3G018850 Rw3G018870 Rw3G018880 Rw3G020740 Rw5G002190 Rw5G004180 Rw5G004190 Rw5G004890 Rw5G013960 Rw5G014000 Rw5G028610 Rw7G030910 Rw7G030920

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 3 cut(s) 303, 624, 1524
AccB1I GGYRCC 2 cut(s) 362, 851
AccI GTMKAC 1 cut(s) 904
AccIII TCCGGA 1 cut(s) 1271
AciI CCGC 2 cut(s) 163, 1263
AclWI GGATC 4 cut(s) 227, 670, 1031, 1860
AcsI RAATTY 3 cut(s) 151, 1598, 2344
AcuI CTGAAG 4 cut(s) 124, 1264, 1928, 2320
AfaI GTAC 3 cut(s) 381, 1081, 2052
AfiI CCNNNNNNNGG 4 cut(s) 273, 560, 799, 1945
AflII CTTAAG 1 cut(s) 1361
AflIII ACRYGT 1 cut(s) 2125
AgsI TTSAA 8 cut(s) 10, 1066, 1148, 1603, 1616, 1634, 2219, 2367
AhlI ACTAGT 1 cut(s) 1456
AjnI CCWGG 4 cut(s) 50, 145, 478, 553
AjuI GAANNNNNNNTTGG 4 cut(s) 1494, 1526, 1703, 1735
AloI GAACNNNNNNTCC 2 cut(s) 273, 305
AluBI AGCT 7 cut(s) 123, 385, 1253, 1578, 1654, 1719, 2414
AluI AGCT 7 cut(s) 123, 385, 1253, 1578, 1654, 1719, 2414
Alw21I GWGCWC 1 cut(s) 2416
Alw26I GTCTC 4 cut(s) 225, 276, 305, 1414
AlwI GGATC 4 cut(s) 227, 670, 1031, 1860
Aor13HI TCCGGA 1 cut(s) 1271
AoxI GGCC 3 cut(s) 665, 1209, 1323
ApeKI GCWGC 6 cut(s) 120, 1055, 1463, 1575, 2320, 2357
ApoI RAATTY 3 cut(s) 151, 1598, 2344
AseI ATTAAT 2 cut(s) 243, 1158
Asp700I GAANNNNTTC 2 cut(s) 1114, 2344
AspS9I GGNCC 4 cut(s) 1324, 1752, 1936, 2254
AsuC2I CCSGG 2 cut(s) 909, 1427
AsuHPI GGTGA 9 cut(s) 256, 662, 807, 1042, 1541, 1607, 1811, 1980, 2306
AvaII GGWCC 3 cut(s) 1752, 1936, 2254
BanI GGYRCC 2 cut(s) 362, 851
BanII GRGCYC 1 cut(s) 2416
BauI CACGAG 1 cut(s) 1800
BbsI GAAGAC 3 cut(s) 804, 1382, 2326
Bbv12I GWGCWC 1 cut(s) 2416
BbvI GCAGC 6 cut(s) 132, 1067, 1475, 1587, 2332, 2344
BccI CCATC 6 cut(s) 86, 422, 944, 953, 1180, 2317
BceAI ACGGC 1 cut(s) 1140
BciT130I CCWGG 4 cut(s) 52, 147, 480, 555
BciVI GTATCC 1 cut(s) 385
BcnI CCSGG 2 cut(s) 909, 1427
BcoDI GTCTC 4 cut(s) 225, 276, 305, 1414
BcuI ACTAGT 1 cut(s) 1456
BfaI CTAG 9 cut(s) 156, 287, 515, 1328, 1457, 1572, 1691, 1746, 1877
BfmI CTRYAG 1 cut(s) 462
BfrI CTTAAG 1 cut(s) 1361
BfuI GTATCC 1 cut(s) 385
BglII AGATCT 1 cut(s) 1219
BisI GCNGC 7 cut(s) 121, 1056, 1263, 1464, 1576, 2321, 2358
BlsI GCNGC 7 cut(s) 122, 1057, 1264, 1465, 1577, 2322, 2359
Bme1390I CCNGG 6 cut(s) 52, 147, 480, 555, 909, 1427
Bme18I GGWCC 3 cut(s) 1752, 1936, 2254
BmgT120I GGNCC 4 cut(s) 1324, 1752, 1936, 2254
BmiI GGNNCC 4 cut(s) 364, 593, 853, 1937
BmrFI CCNGG 6 cut(s) 52, 147, 480, 555, 909, 1427
BmrI ACTGGG 3 cut(s) 519, 570, 604
BmsI GCATC 5 cut(s) 772, 1055, 1677, 2201, 2309
BmuI ACTGGG 3 cut(s) 519, 570, 604
BoxI GACNNNNGTC 1 cut(s) 1382
BpiI GAAGAC 3 cut(s) 804, 1382, 2326
BplI GAGNNNNNCTC 2 cut(s) 2090, 2122
BpmI CTGGAG 1 cut(s) 276
Bpu10I CCTNAGC 2 cut(s) 1579, 2316
BpuEI CTTGAG 5 cut(s) 65, 82, 1427, 1813, 2227
BpuMI CCSGG 2 cut(s) 909, 1427
BsaI GGTCTC 2 cut(s) 276, 305
BsaJI CCNNGG 8 cut(s) 51, 145, 478, 553, 662, 908, 1930, 2250
BsaWI WCCGGW 1 cut(s) 1271
BsaXI ACNNNNNCTCC 4 cut(s) 273, 303, 794, 824
Bsc4I CCNNNNNNNGG 4 cut(s) 273, 560, 799, 1945
Bse1I ACTGG 6 cut(s) 315, 364, 514, 565, 610, 839
Bse3DI GCAATG 1 cut(s) 1065
BseAI TCCGGA 1 cut(s) 1271
BseBI CCWGG 4 cut(s) 52, 147, 480, 555
BseDI CCNNGG 8 cut(s) 51, 145, 478, 553, 662, 908, 1930, 2250
BseGI GGATG 8 cut(s) 91, 501, 968, 1399, 1405, 1692, 2035, 2270
BseLI CCNNNNNNNGG 4 cut(s) 273, 560, 799, 1945
BseMI GCAATG 1 cut(s) 1065
BseMII CTCAG 3 cut(s) 1245, 1593, 1917
BseNI ACTGG 6 cut(s) 315, 364, 514, 565, 610, 839
BseRI GAGGAG 3 cut(s) 20, 1692, 2111
BseXI GCAGC 6 cut(s) 132, 1067, 1475, 1587, 2332, 2344
BshFI GGCC 3 cut(s) 667, 1211, 1325
BshNI GGYRCC 2 cut(s) 362, 851
BsiHKAI GWGCWC 1 cut(s) 2416
BsiSI CCGG 4 cut(s) 908, 1212, 1272, 1427
BslFI GGGAC 3 cut(s) 68, 578, 1949
BslI CCNNNNNNNGG 4 cut(s) 273, 560, 799, 1945
BsmAI GTCTC 4 cut(s) 225, 276, 305, 1414
BsmFI GGGAC 3 cut(s) 68, 578, 1949
BsmI GAATGC 2 cut(s) 1264, 2214
BsnI GGCC 3 cut(s) 667, 1211, 1325
Bso31I GGTCTC 2 cut(s) 276, 305
Bsp1286I GDGCHC 1 cut(s) 2416
Bsp13I TCCGGA 1 cut(s) 1271
Bsp1407I TGTACA 1 cut(s) 379
Bsp143I GATC 7 cut(s) 65, 219, 675, 1036, 1219, 1444, 1852
Bsp19I CCATGG 1 cut(s) 1930
BspACI CCGC 2 cut(s) 163, 1263
BspANI GGCC 3 cut(s) 667, 1211, 1325
BspCNI CTCAG 3 cut(s) 1246, 1592, 1916
BspEI TCCGGA 1 cut(s) 1271
BspLI GGNNCC 4 cut(s) 364, 593, 853, 1937
BspPI GGATC 4 cut(s) 227, 670, 1031, 1860
BspT107I GGYRCC 2 cut(s) 362, 851
BspTI CTTAAG 1 cut(s) 1361
BspTNI GGTCTC 2 cut(s) 276, 305
BsrDI GCAATG 1 cut(s) 1065
BsrGI TGTACA 1 cut(s) 379
BsrI ACTGG 6 cut(s) 315, 364, 514, 565, 610, 839
BssECI CCNNGG 8 cut(s) 51, 145, 478, 553, 662, 908, 1930, 2250
BssMI GATC 7 cut(s) 65, 219, 675, 1036, 1219, 1444, 1852
BssSI CACGAG 1 cut(s) 1800
BssT1I CCWWGG 3 cut(s) 662, 1930, 2250
Bst2BI CACGAG 1 cut(s) 1800
Bst2UI CCWGG 4 cut(s) 52, 147, 480, 555
Bst4CI ACNGT 4 cut(s) 211, 878, 1311, 2229
Bst6I CTCTTC 3 cut(s) 29, 38, 2310
BstAFI CTTAAG 1 cut(s) 1361
BstAUI TGTACA 1 cut(s) 379
BstC8I GCNNGC 5 cut(s) 1292, 1323, 1347, 2237, 2325
BstDEI CTNAG 9 cut(s) 403, 636, 1106, 1254, 1579, 1759, 1903, 2158, 2316
BstDSI CCRYGG 1 cut(s) 1930
BstF5I GGATG 8 cut(s) 91, 501, 968, 1399, 1405, 1692, 2035, 2270
BstKTI GATC 7 cut(s) 68, 222, 678, 1039, 1222, 1447, 1855
BstMAI GTCTC 4 cut(s) 225, 276, 305, 1414
BstMBI GATC 7 cut(s) 65, 219, 675, 1036, 1219, 1444, 1852
BstMWI GCNNNNNNNGC 5 cut(s) 763, 867, 1052, 1259, 1322
BstNI CCWGG 4 cut(s) 52, 147, 480, 555
BstNSI RCATGY 3 cut(s) 1294, 2129, 2138
BstPAI GACNNNNGTC 1 cut(s) 1382
BstSCI CCNGG 6 cut(s) 50, 145, 478, 553, 907, 1425
BstSFI CTRYAG 1 cut(s) 462
BstV1I GCAGC 6 cut(s) 132, 1067, 1475, 1587, 2332, 2344
BstV2I GAAGAC 3 cut(s) 804, 1382, 2326
BstX2I RGATCY 3 cut(s) 1036, 1219, 1852
BstYI RGATCY 3 cut(s) 1036, 1219, 1852
BsuI GTATCC 1 cut(s) 385
BsuRI GGCC 3 cut(s) 667, 1211, 1325
BtgI CCRYGG 1 cut(s) 1930
BtgZI GCGATG 1 cut(s) 2160
BtsCI GGATG 8 cut(s) 91, 501, 968, 1399, 1405, 1692, 2035, 2270
BtsI GCAGTG 2 cut(s) 2007, 2359
BtsIMutI CAGTG 5 cut(s) 216, 357, 883, 2007, 2359
Cac8I GCNNGC 5 cut(s) 1292, 1323, 1347, 2237, 2325
Cfr13I GGNCC 4 cut(s) 1324, 1752, 1936, 2254
CseI GACGC 1 cut(s) 1052
Csp6I GTAC 3 cut(s) 380, 1080, 2051
CviQI GTAC 3 cut(s) 380, 1080, 2051
DdeI CTNAG 9 cut(s) 403, 636, 1106, 1254, 1579, 1759, 1903, 2158, 2316
DpnI GATC 7 cut(s) 67, 221, 677, 1038, 1221, 1446, 1854
DpnII GATC 7 cut(s) 65, 219, 675, 1036, 1219, 1444, 1852
Eam1104I CTCTTC 3 cut(s) 29, 38, 2310
EarI CTCTTC 3 cut(s) 29, 38, 2310
Ecl136II GAGCTC 1 cut(s) 2414
Eco130I CCWWGG 3 cut(s) 662, 1930, 2250
Eco24I GRGCYC 1 cut(s) 2416
Eco31I GGTCTC 2 cut(s) 276, 305
Eco47I GGWCC 3 cut(s) 1752, 1936, 2254
Eco53kI GAGCTC 1 cut(s) 2414
Eco57I CTGAAG 4 cut(s) 124, 1264, 1928, 2320
EcoICRI GAGCTC 1 cut(s) 2414
EcoO109I RGGNCCY 1 cut(s) 1752
EcoRI GAATTC 1 cut(s) 1598
EcoRII CCWGG 4 cut(s) 50, 145, 478, 553
EcoT14I CCWWGG 3 cut(s) 662, 1930, 2250
EcoT22I ATGCAT 1 cut(s) 2216
EcoT38I GRGCYC 1 cut(s) 2416
ErhI CCWWGG 3 cut(s) 662, 1930, 2250
FaqI GGGAC 3 cut(s) 68, 578, 1949
FauNDI CATATG 2 cut(s) 376, 1975
FblI GTMKAC 1 cut(s) 904
Fnu4HI GCNGC 7 cut(s) 121, 1056, 1263, 1464, 1576, 2321, 2358
FokI GGATG 8 cut(s) 98, 508, 975, 1406, 1412, 1699, 2042, 2257
FriOI GRGCYC 1 cut(s) 2416
Fsp4HI GCNGC 7 cut(s) 121, 1056, 1263, 1464, 1576, 2321, 2358
FspBI CTAG 9 cut(s) 156, 287, 515, 1328, 1457, 1572, 1691, 1746, 1877
GluI GCNGC 7 cut(s) 121, 1056, 1263, 1464, 1576, 2321, 2358
GsuI CTGGAG 1 cut(s) 276
HaeIII GGCC 3 cut(s) 667, 1211, 1325
HapII CCGG 4 cut(s) 908, 1212, 1272, 1427
HgaI GACGC 1 cut(s) 1052
HindIII AAGCTT 2 cut(s) 1652, 1717
HpaII CCGG 4 cut(s) 908, 1212, 1272, 1427
HphI GGTGA 9 cut(s) 256, 662, 807, 1042, 1541, 1607, 1811, 1980, 2306
Hpy166II GTNNAC 3 cut(s) 905, 974, 1201
Hpy188I TCNGA 9 cut(s) 202, 504, 680, 958, 1449, 1483, 1906, 2029, 2339
Hpy8I GTNNAC 3 cut(s) 905, 974, 1201
HpyCH4III ACNGT 4 cut(s) 211, 878, 1311, 2229
HpyCH4IV ACGT 1 cut(s) 597
HpyF10VI GCNNNNNNNGC 5 cut(s) 763, 867, 1052, 1259, 1322
HpyF3I CTNAG 9 cut(s) 403, 636, 1106, 1254, 1579, 1759, 1903, 2158, 2316
HpySE526I ACGT 1 cut(s) 597
Kpn2I TCCGGA 1 cut(s) 1271
Kzo9I GATC 7 cut(s) 65, 219, 675, 1036, 1219, 1444, 1852
LmnI GCTCC 2 cut(s) 591, 2411
Lsp1109I GCAGC 6 cut(s) 132, 1067, 1475, 1587, 2332, 2344
LweI GCATC 5 cut(s) 772, 1055, 1677, 2201, 2309
MaeI CTAG 9 cut(s) 156, 287, 515, 1328, 1457, 1572, 1691, 1746, 1877
MaeII ACGT 1 cut(s) 597
MaeIII GTNAC 4 cut(s) 601, 830, 1533, 1986
MalI GATC 7 cut(s) 67, 221, 677, 1038, 1221, 1446, 1854
MboI GATC 7 cut(s) 65, 219, 675, 1036, 1219, 1444, 1852
MflI RGATCY 3 cut(s) 1036, 1219, 1852
MhlI GDGCHC 1 cut(s) 2416
MlyI GAGTC 3 cut(s) 987, 1718, 1820
MmeI TCCRAC 3 cut(s) 369, 917, 1948
Mph1103I ATGCAT 1 cut(s) 2216
MroI TCCGGA 1 cut(s) 1271
MroXI GAANNNNTTC 2 cut(s) 1114, 2344
MseI TTAA 9 cut(s) 243, 473, 527, 1158, 1362, 1488, 1835, 2385, 2393
MslI CAYNNNNRTG 1 cut(s) 849
MspA1I CMGCKG 1 cut(s) 385
MspCI CTTAAG 1 cut(s) 1361
MspI CCGG 4 cut(s) 908, 1212, 1272, 1427
MspR9I CCNGG 6 cut(s) 52, 147, 480, 555, 909, 1427
Mva1269I GAATGC 2 cut(s) 1264, 2214
MvaI CCWGG 4 cut(s) 52, 147, 480, 555
MwoI GCNNNNNNNGC 5 cut(s) 763, 867, 1052, 1259, 1322
NciI CCSGG 2 cut(s) 909, 1427
NcoI CCATGG 1 cut(s) 1930
NdeI CATATG 2 cut(s) 376, 1975
NdeII GATC 7 cut(s) 65, 219, 675, 1036, 1219, 1444, 1852
NlaIV GGNNCC 4 cut(s) 364, 593, 853, 1937
NmuCI GTSAC 3 cut(s) 601, 830, 1986
NsiI ATGCAT 1 cut(s) 2216
NspI RCATGY 3 cut(s) 1294, 2129, 2138
PaeI GCATGC 1 cut(s) 1294
PciI ACATGT 1 cut(s) 2125
PctI GAATGC 2 cut(s) 1264, 2214
PdmI GAANNNNTTC 2 cut(s) 1114, 2344
PfeI GAWTC 8 cut(s) 432, 499, 1275, 1642, 2013, 2171, 2246, 2363
PkrI GCNGC 7 cut(s) 122, 1057, 1264, 1465, 1577, 2322, 2359
PleI GAGTC 3 cut(s) 986, 1718, 1820
PpsI GAGTC 3 cut(s) 986, 1718, 1820
PpuMI RGGWCCY 1 cut(s) 1752
PscI ACATGT 1 cut(s) 2125
PshAI GACNNNNGTC 1 cut(s) 1382
PshBI ATTAAT 2 cut(s) 243, 1158
PsiI TTATAA 3 cut(s) 303, 624, 1524
Psp124BI GAGCTC 1 cut(s) 2416
Psp5II RGGWCCY 1 cut(s) 1752
Psp6I CCWGG 4 cut(s) 50, 145, 478, 553
PspGI CCWGG 4 cut(s) 50, 145, 478, 553
PspN4I GGNNCC 4 cut(s) 364, 593, 853, 1937
PspPI GGNCC 4 cut(s) 1324, 1752, 1936, 2254
PspPPI RGGWCCY 1 cut(s) 1752
PsuI RGATCY 3 cut(s) 1036, 1219, 1852
PvuII CAGCTG 1 cut(s) 385
RsaI GTAC 3 cut(s) 381, 1081, 2052
RsaNI GTAC 3 cut(s) 380, 1080, 2051
RseI CAYNNNNRTG 1 cut(s) 849
SacI GAGCTC 1 cut(s) 2416
SaqAI TTAA 9 cut(s) 243, 473, 527, 1158, 1362, 1488, 1835, 2385, 2393
SatI GCNGC 7 cut(s) 121, 1056, 1263, 1464, 1576, 2321, 2358
Sau3AI GATC 7 cut(s) 65, 219, 675, 1036, 1219, 1444, 1852
Sau96I GGNCC 4 cut(s) 1324, 1752, 1936, 2254
SchI GAGTC 3 cut(s) 987, 1718, 1820
ScrFI CCNGG 6 cut(s) 52, 147, 480, 555, 909, 1427
SduI GDGCHC 1 cut(s) 2416
SfaNI GCATC 5 cut(s) 772, 1055, 1677, 2201, 2309
SfcI CTRYAG 1 cut(s) 462
SinI GGWCC 3 cut(s) 1752, 1936, 2254
SmiMI CAYNNNNRTG 1 cut(s) 849
SmlI CTYRAG 6 cut(s) 61, 80, 1361, 1406, 1828, 2206
SmoI CTYRAG 6 cut(s) 61, 80, 1361, 1406, 1828, 2206
SpeI ACTAGT 1 cut(s) 1456
SphI GCATGC 1 cut(s) 1294
SsiI CCGC 2 cut(s) 163, 1263
SspI AATATT 2 cut(s) 1870, 1926
SspMI CTAG 9 cut(s) 156, 287, 515, 1328, 1457, 1572, 1691, 1746, 1877
SstI GAGCTC 1 cut(s) 2416
StyD4I CCNGG 6 cut(s) 50, 145, 478, 553, 907, 1425
StyI CCWWGG 3 cut(s) 662, 1930, 2250
TaaI ACNGT 4 cut(s) 211, 878, 1311, 2229
TaiI ACGT 1 cut(s) 600
TaqI TCGA 8 cut(s) 68, 674, 891, 1049, 1245, 1443, 1698, 2416
TaqII GACCGA 1 cut(s) 2271
TatI WGTACW 2 cut(s) 379, 2050
TauI GCSGC 1 cut(s) 1265
TfiI GAWTC 8 cut(s) 432, 499, 1275, 1642, 2013, 2171, 2246, 2363
Tru1I TTAA 9 cut(s) 243, 473, 527, 1158, 1362, 1488, 1835, 2385, 2393
Tru9I TTAA 9 cut(s) 243, 473, 527, 1158, 1362, 1488, 1835, 2385, 2393
TscAI CASTG 5 cut(s) 216, 364, 883, 2007, 2359
TseFI GTSAC 3 cut(s) 601, 830, 1986
TseI GCWGC 6 cut(s) 120, 1055, 1463, 1575, 2320, 2357
Tsp45I GTSAC 3 cut(s) 601, 830, 1986
TspGWI ACGGA 1 cut(s) 2263
TspRI CASTG 5 cut(s) 216, 364, 883, 2007, 2359
Vha464I CTTAAG 1 cut(s) 1361
VpaK11BI GGWCC 3 cut(s) 1752, 1936, 2254
VspI ATTAAT 2 cut(s) 243, 1158
XapI RAATTY 3 cut(s) 151, 1598, 2344
XbaI TCTAGA 1 cut(s) 1876
XceI RCATGY 3 cut(s) 1294, 2129, 2138
XmiI GTMKAC 1 cut(s) 904
XmnI GAANNNNTTC 2 cut(s) 1114, 2344
XspI CTAG 9 cut(s) 156, 287, 515, 1328, 1457, 1572, 1691, 1746, 1877
Zsp2I ATGCAT 1 cut(s) 2216
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.