Rmu_sc0008085.1_g000013

serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0008085.1
OG0000112
Physical Location & Seq
Forward (+)
37888 .. 42239
4352 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0008085.1_g000013.1.cds

Sequence Viewer

Length: 2670 bp
atgcgtaaacagctagtagaattgtcaacaacagagacactggaagtggacaccatcagatggaatgaacaacaattgaaggatgtcgatggtgaagttttggtgtccaaagaaagcaactttgagttgggtttcttcagccccggcgattctagccaccggtacgttggtatttggtattctcaatctaaaatatctgcaaaaacagtggtgtggattgcaaacagagacaaccccatcaatgatacatctggagttctcacgatgaacaggtatggggaattagctctttatgcttataacatggagagcattcctgtatggtctacaaatgtatcacagtcggtccaaaacacagacaccttatatagatatgtccagcttttagatactggaaacttagttctgttccgggatggtaaaaatggaagcttgattttatggcaaagttttgattatcctacagatactgtaatcccaggtatgaaatctgggttgaattggaaaaaaggtctagattgggttttaacatcttggaagtcacaagctgaccctggaaagggggactatacctttagggtcgatccgaatcacaatgctactccccaatattttgtctacaaaggtttcactaagtattggcgaatggatgcagggccatggcctaattttgttagtaatgccaacgaaatgtattttaccctgccttataagcgcaatgctatttcaatagtaaggatgaaggattctgggttacttcagcacctaacatggaatgatgctgaccatcagtgggtggaaatgtggtcttcgccgaaatacccttgtgactggtatggacattgtggtgccaacagcagatgtaggcctgacaatattaatttatttgagtgtgagtgtattccagggtatgagccaaaatctgtagatggttggaatcggagagatggaacagatggatgtgtgagtaaacgagtaagagtgtccaagtgtaggaatggagaagggtttgtgaaggtggcaagggtaaaagatccagacacatcgaatgtagcaaggttgagaacaagtatgagtgccaaagagtgtgagcaggagtgcttgaaaaattgttcttgcacggcatatatgagcattacactggaaagggttgccaattgcttgacatggtatgatgacttgatggacatgttagtttacacaggggccggacgagatctatatgttcgtgtggataaaatttcattagctgaggccagaaactcacaaggtttcttcaggagtggcaaggtccttattccaatactaactgctctggtggcgctactactaatcattatactttccttgtggttgcttaagaaaaagaggaagacaagagactatttggatgcggaggaacttgaggaaactaagagacacccggaattgcaatttttcgatcttaacacactaattgcagccacagacaacttctctgatgccaataaactcggccaaggtggttttggcagtgtttataagggtgagttaccaaacgaacaaatagttgctataaaaagattgtccagaacttcaggacagggaatcgaagaattcaaaaacgaagttgcactaatagccagacttcaacacaggaatcttgtgaaacttttaggctgctgtataaagggagaagaaaggatattggttctggaatacatgccgcacaaaagcttggactcctttctttttgataacacaaggaggtcactcttaaattgggaaaagcgttttgaaattatcaatggggttgctcgtggggttctatatcttcatcgggactcaagattgaggattatccacagggatctgaaaaccagtaatgtccttttagatgccgagttagacccaaaaatttctgatttcggcatggcaagaatatttcaaggggaccaactcctggaaaagacaaatagagttgtcggaacatatggctacatgtcaccagaatatgcagtatttgggagattttctacgaaatcggatgtgtttagttttgggatcatactattggagattgttagtggcaagagaaacaatggttcttatgagatgcataattccataaacttgataggacatgtatggcaactttgggtagaagacaaagtcttggaaattgtggattcatcactagagatttatcagcttgatgaagtcttgagatgcattcaagttgggcttttgtgcgtgcaagaagatttgaaggaccgaccagccatgtcagccgtcgtgttcatgttgagtggtgaaacatctcttccatctcctaagcagcctgcatttataattaataaactacagcctgccactctcatctctctctctctcctctcgtctcctctctcctccgcgtcgtctcttctcttctctctctcctctctctcgtcagcgtcgtcgtcgacgtcgacgtcgaagctcaatccgaggccaccgaaatccgtctctctgtctcctctctctctcgtcagcgccatcgttgaggctcaacccgaggccaccggaatcgcaggaggttttatcaatgattctaatagtgcaggtctacaaccgacgaagaagaagaagagaagggaaagcatatcagcaacaaaggttgagctccgatttggtggtttgctccgatga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
B_lectin DUF3403 PAN_2 Pkinase Pkinase_Tyr S_locus_glycop

Protein Analysis

889

Amino Acids

100.35

Weight (kDa)

8.38

Isoelectric Point (pI)

41.71

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000112)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g03320 FvH4_3g03322 FvH4_3g03323 FvH4_3g03340 FvH4_3g03350 FvH4_3g03351 FvH4_3g03370 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g06140 FvH4_6g00257 FvH4_6g00257 FvH4_6g00270 FvH4_6g00300 FvH4_6g20800 FvH4_6g20800 FvH4_6g20800 FvH4_6g20800 FvH4_6g20800
malus_domestica MD05G1232700.v1.1 MD05G1327700.v1.1 MD05G1327800.v1.1 MD05G1327900.v1.1 MD05G1328000.v1.1 MD05G1328200.v1.1 MD05G1328300.v1.1 MD05G1328500.v1.1 MD05G1332000.v1.1 MD05G1332100.v1.1 MD10G1307600.v1.1 MD10G1307800.v1.1
prunus_persica Prupe.4G031900_v2.0.a1 Prupe.4G032000_v2.0.a1 Prupe.4G032000_v2.0.a1 Prupe.4G032100_v2.0.a1 Prupe.4G032200_v2.0.a1 Prupe.4G032200_v2.0.a1 Prupe.4G032200_v2.0.a1
pyrus_communis pycom05g30180 pycom05g30190 pycom05g30200 pycom05g30210 pycom10g25920 pycom10g25930
rosa_chinensis RchiOBHm_Chr2g0130831 RchiOBHm_Chr2g0132531 RchiOBHm_Chr2g0132541 RchiOBHm_Chr3g0455681 RchiOBHm_Chr3g0476681 RchiOBHm_Chr3g0476761 RchiOBHm_Chr3g0476771 RchiOBHm_Chr3g0476791 RchiOBHm_Chr3g0476801 RchiOBHm_Chr3g0476811 RchiOBHm_Chr4g0413551 RchiOBHm_Chr4g0413561 RchiOBHm_Chr5g0002911 RchiOBHm_Chr5g0005071 RchiOBHm_Chr5g0005101 RchiOBHm_Chr5g0005111 RchiOBHm_Chr5g0005121 RchiOBHm_Chr5g0005131 RchiOBHm_Chr5g0005141 RchiOBHm_Chr5g0005161 RchiOBHm_Chr5g0005171 RchiOBHm_Chr5g0006341 RchiOBHm_Chr5g0046161 RchiOBHm_Chr5g0046171 RchiOBHm_Chr5g0046181 RchiOBHm_Chr5g0046221 RchiOBHm_Chr5g0046231 RchiOBHm_Chr7g0224061 RchiOBHm_Chr7g0224081 RchiOBHm_Chr7g0224101 RchiOBHm_Chr7g0224111 RchiOBHm_Chr7g0224121
rosa_laevigata RLG00000010193 RLG00000019146 RLG00000019148 RLG00000019149 RLG00000019150 RLG00000023750 RLG00000023751 RLG00000023753 RLG00000029486 RLG00000031068 RLG00000031069 RLG00000031284 RLG00000031285 RLG00000031286 RLG00000031289 RLG00000031290 RLG00000031291 RLG00000031292 RLG00000031293 RLG00000031294 RLG00000031295 RLG00000031296 RLG00000031297 RLG00000031363 RLG00000032618 RLG00000032619
rosa_multiflora Rmu_co8147584.1_g000001 Rmu_co8205828.1_g000001 Rmu_co8373645.1_g000001 Rmu_co8407679.1_g000001 Rmu_co8452561.1_g000001 Rmu_sc0001035.1_g000076 Rmu_sc0001884.1_g000026 Rmu_sc0001884.1_g000027 Rmu_sc0001884.1_g000035 Rmu_sc0002157.1_g000026 Rmu_sc0002399.1_g000006 Rmu_sc0002399.1_g000007 Rmu_sc0002883.1_g000010 Rmu_sc0003629.1_g000014 Rmu_sc0003884.1_g000004 Rmu_sc0007865.1_g000005 Rmu_sc0008085.1_g000013 Rmu_sc0008085.1_g000014 Rmu_sc0008085.1_g000016 Rmu_sc0008085.1_g000018 Rmu_sc0008432.1_g000004 Rmu_sc0008714.1_g000002 Rmu_sc0009296.1_g000008 Rmu_sc0009296.1_g000009 Rmu_sc0009296.1_g000011 Rmu_sc0010281.1_g000001 Rmu_sc0010281.1_g000002 Rmu_sc0010714.1_g000011 Rmu_sc0010714.1_g000016 Rmu_sc0011169.1_g000001 Rmu_sc0011169.1_g000007 Rmu_sc0013603.1_g000006 Rmu_sc0020478.1_g000003 Rmu_sc0020478.1_g000007 Rmu_sc0025106.1_g000012 Rmu_sc0032709.1_g000001 Rmu_sc0033028.1_g000001
rosa_roxburghii Rroxscaffold_1G00069570 Rroxscaffold_1G00069610 Rroxscaffold_1G00069620 Rroxscaffold_1G00070480 Rroxscaffold_1G00070490 Rroxscaffold_1G00070500 Rroxscaffold_1G00070510 Rroxscaffold_1G00070520 Rroxscaffold_1G00070530 Rroxscaffold_1G00070540 Rroxscaffold_1G00070550 Rroxscaffold_1G00070590 Rroxscaffold_1G00072950 Rroxscaffold_1G00073080 Rroxscaffold_2G00111810 Rroxscaffold_2G00111820 Rroxscaffold_2G00113530 Rroxscaffold_2G00113870 Rroxscaffold_6G00405010 Rroxscaffold_6G00405020 Rroxscaffold_6G00423590 Rroxscaffold_6G00424100
rosa_rugosa Rorug02G0293200 Rorug02G0293300 Rorug02G0293400 Rorug02G0305900 Rorug02G0305900 Rorug03G0009100 Rorug03G0157000 Rorug03G0157000 Rorug03G0304900 Rorug04G0400500 Rorug04G0415200 Rorug04G0415300 Rorug04G0415400 Rorug04G0415500 Rorug04G0421100 Rorug05G0068000 Rorug05G0068100 Rorug05G0068200 Rorug05G0068500 Rorug05G0224600 Rorug05G0224700
rosa_samantha Rh2CG331700 Rh2CG341600 Rh2CG341700 Rh2DG381200 Rh3DG071200 Rh3DG233400 Rh3DG233500 Rh3DG233600 Rh5AG043100 Rh5CG026000 Rh5CG047700 Rh5CG047800 Rh5CG047900 Rh5CG048000 Rh5CG048100 Rh5CG048300 Rh5CG056500 Rh5CG340500 Rh5CG340700 Rh5CG340800 Rh7AG365000
rosa_wichuraiana Rw0G002360 Rw0G002370 Rw0G012520 Rw0G018230 Rw0G019190 Rw2G027480 Rw2G029150 Rw3G005520 Rw3G005880 Rw3G005890 Rw3G018840 Rw3G018850 Rw3G018870 Rw3G018880 Rw3G020740 Rw5G002190 Rw5G004180 Rw5G004190 Rw5G004890 Rw5G013960 Rw5G014000 Rw5G028610 Rw7G030910 Rw7G030920

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 4 cut(s) 300, 711, 1521, 2330
AasI GACNNNNNNGTC 1 cut(s) 2452
AatII GACGTC 2 cut(s) 2450, 2456
Acc36I ACCTGC 1 cut(s) 2573
AccB1I GGYRCC 1 cut(s) 848
AccB7I CCANNNNNTGG 2 cut(s) 60, 1942
AccI GTMKAC 5 cut(s) 326, 618, 2444, 2450, 2587
AccII CGCG 1 cut(s) 2396
AciI CCGC 3 cut(s) 1394, 1706, 2394
AclWI GGATC 4 cut(s) 578, 1028, 1857, 2051
AcoI YGGCCR 1 cut(s) 1495
AcsI RAATTY 3 cut(s) 1239, 1595, 1896
AcuI CTGAAG 4 cut(s) 121, 743, 1261, 1560
AcyI GRCGYC 2 cut(s) 2447, 2453
AfaI GTAC 1 cut(s) 164
AfiI CCNNNNNNNGG 6 cut(s) 60, 559, 560, 793, 993, 1942
AflII CTTAAG 1 cut(s) 1358
AflIII ACRYGT 3 cut(s) 1188, 1980, 2122
AgeI ACCGGT 1 cut(s) 159
AjnI CCWGG 4 cut(s) 478, 553, 904, 1941
AloI GAACNNNNNNTCC 2 cut(s) 387, 419
Alw21I GWGCWC 1 cut(s) 2646
Alw26I GTCTC 8 cut(s) 29, 222, 1374, 1411, 2385, 2406, 2491, 2499
AlwI GGATC 4 cut(s) 578, 1028, 1857, 2051
AlwNI CAGNNNCTG 1 cut(s) 470
Ama87I CYCGRG 1 cut(s) 2534
AoxI GGCC 8 cut(s) 656, 662, 866, 1206, 1254, 1495, 2471, 2538
ApeKI GCWGC 3 cut(s) 1460, 1659, 2317
ApoI RAATTY 3 cut(s) 1239, 1595, 1896
AseI ATTAAT 2 cut(s) 879, 2334
AsiGI ACCGGT 1 cut(s) 159
AspLEI GCGC 3 cut(s) 717, 1324, 2516
AspS9I GGNCC 6 cut(s) 346, 656, 1206, 1291, 1933, 2251
AsuC2I CCSGG 3 cut(s) 144, 413, 1424
AsuHPI GGTGA 4 cut(s) 104, 1538, 1977, 2303
AvaI CYCGRG 1 cut(s) 2534
AvaII GGWCC 4 cut(s) 346, 1291, 1933, 2251
BaeI ACNNNNGTAYC 4 cut(s) 154, 187, 318, 351
BanI GGYRCC 1 cut(s) 848
BanII GRGCYC 1 cut(s) 2646
BauI CACGAG 1 cut(s) 1797
BbsI GAAGAC 3 cut(s) 801, 1379, 2151
Bbv12I GWGCWC 1 cut(s) 2646
BbvCI CCTCAGC 1 cut(s) 1251
BbvI GCAGC 3 cut(s) 1472, 1646, 2329
BceAI ACGGC 2 cut(s) 1137, 2255
BciT130I CCWGG 4 cut(s) 480, 555, 906, 1943
BcnI CCSGG 3 cut(s) 144, 413, 1424
BcoDI GTCTC 8 cut(s) 29, 222, 1374, 1411, 2385, 2406, 2491, 2499
BfaI CTAG 4 cut(s) 14, 153, 515, 2177
BfmI CTRYAG 3 cut(s) 462, 924, 2342
BfoI RGCGCY 2 cut(s) 1325, 2517
BfrI CTTAAG 1 cut(s) 1358
BfuAI ACCTGC 1 cut(s) 2573
BglII AGATCT 1 cut(s) 1216
BisI GCNGC 4 cut(s) 1461, 1660, 1706, 2318
BlsI GCNGC 4 cut(s) 1462, 1661, 1707, 2319
Bme1390I CCNGG 7 cut(s) 144, 413, 480, 555, 906, 1424, 1943
Bme18I GGWCC 4 cut(s) 346, 1291, 1933, 2251
BmeT110I CYCGRG 1 cut(s) 2534
BmgT120I GGNCC 6 cut(s) 346, 656, 1206, 1291, 1933, 2251
BmiI GGNNCC 3 cut(s) 850, 1207, 1934
BmrFI CCNGG 7 cut(s) 144, 413, 480, 555, 906, 1424, 1943
BmsI GCATC 7 cut(s) 640, 769, 1381, 1471, 1867, 2085, 2198
BpiI GAAGAC 3 cut(s) 801, 1379, 2151
BpmI CTGGAG 1 cut(s) 273
Bpu10I CCTNAGC 2 cut(s) 1251, 2313
BpuEI CTTGAG 3 cut(s) 1424, 1810, 2224
BpuMI CCSGG 3 cut(s) 144, 413, 1424
BsaBI GATNNNNATC 1 cut(s) 588
BsaHI GRCGYC 2 cut(s) 2447, 2453
BsaJI CCNNGG 8 cut(s) 142, 478, 553, 659, 905, 1498, 2468, 2535
BsaWI WCCGGW 2 cut(s) 159, 2543
Bsc4I CCNNNNNNNGG 6 cut(s) 60, 559, 560, 793, 993, 1942
Bse118I RCCGGY 1 cut(s) 159
Bse1I ACTGG 5 cut(s) 45, 397, 836, 1146, 1860
Bse3DI GCAATG 1 cut(s) 724
Bse8I GATNNNNATC 1 cut(s) 588
BseBI CCWGG 4 cut(s) 480, 555, 906, 1943
BseDI CCNNGG 8 cut(s) 142, 478, 553, 659, 905, 1498, 2468, 2535
BseGI GGATG 7 cut(s) 88, 421, 655, 744, 965, 1396, 2032
BseJI GATNNNNATC 1 cut(s) 588
BseLI CCNNNNNNNGG 6 cut(s) 60, 559, 560, 793, 993, 1942
BseMI GCAATG 1 cut(s) 724
BseMII CTCAG 1 cut(s) 1242
BseNI ACTGG 5 cut(s) 45, 397, 836, 1146, 1860
BseRI GAGGAG 5 cut(s) 2363, 2373, 2380, 2410, 2487
BseXI GCAGC 3 cut(s) 1472, 1646, 2329
BsgI GTGCAG 1 cut(s) 2601
Bsh1236I CGCG 1 cut(s) 2396
BshFI GGCC 8 cut(s) 658, 664, 868, 1208, 1256, 1497, 2473, 2540
BshNI GGYRCC 1 cut(s) 848
BshTI ACCGGT 1 cut(s) 159
BsiHKAI GWGCWC 1 cut(s) 2646
BsiHKCI CYCGRG 1 cut(s) 2534
BsiSI CCGG 6 cut(s) 144, 160, 412, 1209, 1424, 2544
BslFI GGGAC 3 cut(s) 578, 1835, 1946
BslI CCNNNNNNNGG 6 cut(s) 60, 559, 560, 793, 993, 1942
BsmAI GTCTC 8 cut(s) 29, 222, 1374, 1411, 2385, 2406, 2491, 2499
BsmBI CGTCTC 3 cut(s) 2385, 2406, 2491
BsmFI GGGAC 3 cut(s) 578, 1835, 1946
BsmI GAATGC 2 cut(s) 312, 2211
BsnI GGCC 8 cut(s) 658, 664, 868, 1208, 1256, 1497, 2473, 2540
BsoBI CYCGRG 1 cut(s) 2534
Bsp1286I GDGCHC 1 cut(s) 2646
Bsp143I GATC 6 cut(s) 583, 1033, 1216, 1441, 1849, 2043
Bsp19I CCATGG 1 cut(s) 659
BspACI CCGC 3 cut(s) 1394, 1706, 2394
BspANI GGCC 8 cut(s) 658, 664, 868, 1208, 1256, 1497, 2473, 2540
BspCNI CTCAG 1 cut(s) 1243
BspFNI CGCG 1 cut(s) 2396
BspLI GGNNCC 3 cut(s) 850, 1207, 1934
BspMI ACCTGC 1 cut(s) 2573
BspPI GGATC 4 cut(s) 578, 1028, 1857, 2051
BspT107I GGYRCC 1 cut(s) 848
BspTI CTTAAG 1 cut(s) 1358
BsrDI GCAATG 1 cut(s) 724
BsrFI RCCGGY 1 cut(s) 159
BsrI ACTGG 5 cut(s) 45, 397, 836, 1146, 1860
BssAI RCCGGY 1 cut(s) 159
BssECI CCNNGG 8 cut(s) 142, 478, 553, 659, 905, 1498, 2468, 2535
BssMI GATC 6 cut(s) 583, 1033, 1216, 1441, 1849, 2043
BssNI GRCGYC 2 cut(s) 2447, 2453
BssSI CACGAG 1 cut(s) 1797
BssT1I CCWWGG 2 cut(s) 659, 1498
Bst2BI CACGAG 1 cut(s) 1797
Bst2UI CCWGG 4 cut(s) 480, 555, 906, 1943
Bst4CI ACNGT 3 cut(s) 208, 342, 472
Bst6I CTCTTC 4 cut(s) 2307, 2409, 2414, 2603
BstACI GRCGYC 2 cut(s) 2447, 2453
BstAFI CTTAAG 1 cut(s) 1358
BstC8I GCNNGC 3 cut(s) 2234, 2322, 2349
BstDEI CTNAG 5 cut(s) 400, 633, 1251, 1413, 2313
BstDSI CCRYGG 1 cut(s) 659
BstF5I GGATG 7 cut(s) 88, 421, 655, 744, 965, 1396, 2032
BstFNI CGCG 1 cut(s) 2396
BstH2I RGCGCY 2 cut(s) 1325, 2517
BstHHI GCGC 3 cut(s) 717, 1324, 2516
BstKTI GATC 6 cut(s) 586, 1036, 1219, 1444, 1852, 2046
BstMAI GTCTC 8 cut(s) 29, 222, 1374, 1411, 2385, 2406, 2491, 2499
BstMBI GATC 6 cut(s) 583, 1033, 1216, 1441, 1849, 2043
BstMWI GCNNNNNNNGC 7 cut(s) 10, 153, 293, 712, 1319, 1619, 2267
BstNI CCWGG 4 cut(s) 480, 555, 906, 1943
BstNSI RCATGY 4 cut(s) 1192, 1705, 1984, 2126
BstSCI CCNGG 7 cut(s) 142, 411, 478, 553, 904, 1422, 1941
BstSFI CTRYAG 3 cut(s) 462, 924, 2342
BstUI CGCG 1 cut(s) 2396
BstV1I GCAGC 3 cut(s) 1472, 1646, 2329
BstV2I GAAGAC 3 cut(s) 801, 1379, 2151
BstX2I RGATCY 3 cut(s) 1033, 1216, 1849
BstYI RGATCY 3 cut(s) 1033, 1216, 1849
BsuRI GGCC 8 cut(s) 658, 664, 868, 1208, 1256, 1497, 2473, 2540
BtgI CCRYGG 1 cut(s) 659
BtsCI GGATG 7 cut(s) 88, 421, 655, 744, 965, 1396, 2032
BtsI GCAGTG 1 cut(s) 1519
BtsIMutI CAGTG 5 cut(s) 38, 213, 797, 1139, 1519
BveI ACCTGC 1 cut(s) 2573
Cac8I GCNNGC 3 cut(s) 2234, 2322, 2349
CaiI CAGNNNCTG 1 cut(s) 470
CfoI GCGC 3 cut(s) 717, 1324, 2516
Cfr10I RCCGGY 1 cut(s) 159
Cfr13I GGNCC 6 cut(s) 346, 656, 1206, 1291, 1933, 2251
CseI GACGC 2 cut(s) 2385, 2424
Csp6I GTAC 1 cut(s) 163
CspAI ACCGGT 1 cut(s) 159
CspCI CAANNNNNGTGG 2 cut(s) 189, 224
CviQI GTAC 1 cut(s) 163
DdeI CTNAG 5 cut(s) 400, 633, 1251, 1413, 2313
DpnI GATC 6 cut(s) 585, 1035, 1218, 1443, 1851, 2045
DpnII GATC 6 cut(s) 583, 1033, 1216, 1441, 1849, 2043
DrdI GACNNNNNNGTC 1 cut(s) 2452
DseDI GACNNNNNNGTC 1 cut(s) 2452
EaeI YGGCCR 1 cut(s) 1495
Eam1104I CTCTTC 4 cut(s) 2307, 2409, 2414, 2603
EarI CTCTTC 4 cut(s) 2307, 2409, 2414, 2603
Ecl136II GAGCTC 1 cut(s) 2644
Eco130I CCWWGG 2 cut(s) 659, 1498
Eco147I AGGCCT 1 cut(s) 868
Eco24I GRGCYC 1 cut(s) 2646
Eco47I GGWCC 4 cut(s) 346, 1291, 1933, 2251
Eco53kI GAGCTC 1 cut(s) 2644
Eco57I CTGAAG 4 cut(s) 121, 743, 1261, 1560
Eco88I CYCGRG 1 cut(s) 2534
EcoICRI GAGCTC 1 cut(s) 2644
EcoO109I RGGNCCY 1 cut(s) 1291
EcoRI GAATTC 1 cut(s) 1595
EcoRII CCWGG 4 cut(s) 478, 553, 904, 1941
EcoT14I CCWWGG 2 cut(s) 659, 1498
EcoT22I ATGCAT 2 cut(s) 2100, 2213
EcoT38I GRGCYC 1 cut(s) 2646
ErhI CCWWGG 2 cut(s) 659, 1498
Esp3I CGTCTC 3 cut(s) 2385, 2406, 2491
FalI AAGNNNNNCTT 2 cut(s) 2208, 2240
FaqI GGGAC 3 cut(s) 578, 1835, 1946
FauNDI CATATG 1 cut(s) 1972
FblI GTMKAC 5 cut(s) 326, 618, 2444, 2450, 2587
Fnu4HI GCNGC 4 cut(s) 1461, 1660, 1706, 2318
FokI GGATG 7 cut(s) 95, 428, 662, 751, 972, 1403, 2039
FriOI GRGCYC 1 cut(s) 2646
Fsp4HI GCNGC 4 cut(s) 1461, 1660, 1706, 2318
FspBI CTAG 4 cut(s) 14, 153, 515, 2177
GlaI GCGC 3 cut(s) 716, 1323, 2515
GluI GCNGC 4 cut(s) 1461, 1660, 1706, 2318
GsuI CTGGAG 1 cut(s) 273
HaeII RGCGCY 2 cut(s) 1325, 2517
HaeIII GGCC 8 cut(s) 658, 664, 868, 1208, 1256, 1497, 2473, 2540
HapII CCGG 6 cut(s) 144, 160, 412, 1209, 1424, 2544
HgaI GACGC 2 cut(s) 2385, 2424
HhaI GCGC 3 cut(s) 717, 1324, 2516
Hin1I GRCGYC 2 cut(s) 2447, 2453
Hin6I GCGC 3 cut(s) 715, 1322, 2514
HinP1I GCGC 3 cut(s) 715, 1322, 2514
HincII GTYRAC 3 cut(s) 27, 2445, 2451
HindII GTYRAC 3 cut(s) 27, 2445, 2451
HindIII AAGCTT 2 cut(s) 430, 1714
HpaII CCGG 6 cut(s) 144, 160, 412, 1209, 1424, 2544
HphI GGTGA 4 cut(s) 104, 1538, 1977, 2303
HpyAV CCTTC 6 cut(s) 73, 736, 998, 1009, 2242, 2607
HpyCH4III ACNGT 3 cut(s) 208, 342, 472
HpyCH4IV ACGT 3 cut(s) 165, 2447, 2453
HpyF10VI GCNNNNNNNGC 7 cut(s) 10, 153, 293, 712, 1319, 1619, 2267
HpyF3I CTNAG 5 cut(s) 400, 633, 1251, 1413, 2313
HpySE526I ACGT 3 cut(s) 165, 2447, 2453
Hsp92I GRCGYC 2 cut(s) 2447, 2453
HspAI GCGC 3 cut(s) 715, 1322, 2514
Kzo9I GATC 6 cut(s) 583, 1033, 1216, 1441, 1849, 2043
LmnI GCTCC 2 cut(s) 2649, 2667
Lsp1109I GCAGC 3 cut(s) 1472, 1646, 2329
LweI GCATC 7 cut(s) 640, 769, 1381, 1471, 1867, 2085, 2198
MaeI CTAG 4 cut(s) 14, 153, 515, 2177
MaeII ACGT 3 cut(s) 165, 2447, 2453
MaeIII GTNAC 6 cut(s) 540, 753, 827, 1530, 1749, 1983
MalI GATC 6 cut(s) 585, 1035, 1218, 1443, 1851, 2045
MboI GATC 6 cut(s) 583, 1033, 1216, 1441, 1849, 2043
MfeI CAATTG 2 cut(s) 74, 1156
MflI RGATCY 3 cut(s) 1033, 1216, 1849
MhlI GDGCHC 1 cut(s) 2646
MlyI GAGTC 2 cut(s) 1715, 1817
MmeI TCCRAC 2 cut(s) 914, 1945
Mph1103I ATGCAT 2 cut(s) 2100, 2213
MseI TTAA 6 cut(s) 527, 879, 1359, 1446, 1757, 2334
MslI CAYNNNNRTG 1 cut(s) 846
MspCI CTTAAG 1 cut(s) 1358
MspI CCGG 6 cut(s) 144, 160, 412, 1209, 1424, 2544
MspR9I CCNGG 7 cut(s) 144, 413, 480, 555, 906, 1424, 1943
MunI CAATTG 2 cut(s) 74, 1156
Mva1269I GAATGC 2 cut(s) 312, 2211
MvaI CCWGG 4 cut(s) 480, 555, 906, 1943
MvnI CGCG 1 cut(s) 2396
MwoI GCNNNNNNNGC 7 cut(s) 10, 153, 293, 712, 1319, 1619, 2267
NciI CCSGG 3 cut(s) 144, 413, 1424
NcoI CCATGG 1 cut(s) 659
NdeI CATATG 1 cut(s) 1972
NdeII GATC 6 cut(s) 583, 1033, 1216, 1441, 1849, 2043
NlaIV GGNNCC 3 cut(s) 850, 1207, 1934
NmeAIII GCCGAG 2 cut(s) 1473, 1906
NmuCI GTSAC 4 cut(s) 540, 827, 1749, 1983
NsiI ATGCAT 2 cut(s) 2100, 2213
NspI RCATGY 4 cut(s) 1192, 1705, 1984, 2126
PceI AGGCCT 1 cut(s) 868
PciI ACATGT 3 cut(s) 1188, 1980, 2122
PcsI WCGNNNNNNNCGW 5 cut(s) 2435, 2444, 2447, 2450, 2453
PctI GAATGC 2 cut(s) 312, 2211
PfeI GAWTC 9 cut(s) 149, 589, 746, 937, 1587, 1639, 2168, 2547, 2570
PflFI GACNNNGTC 1 cut(s) 2150
PflMI CCANNNNNTGG 2 cut(s) 60, 1942
PfoI TCCNGGA 2 cut(s) 411, 1941
PinAI ACCGGT 1 cut(s) 159
PkrI GCNGC 4 cut(s) 1462, 1661, 1707, 2319
PleI GAGTC 2 cut(s) 1715, 1817
PpsI GAGTC 2 cut(s) 1715, 1817
PpuMI RGGWCCY 1 cut(s) 1291
PscI ACATGT 3 cut(s) 1188, 1980, 2122
PshBI ATTAAT 2 cut(s) 879, 2334
PsiI TTATAA 4 cut(s) 300, 711, 1521, 2330
Psp124BI GAGCTC 1 cut(s) 2646
Psp5II RGGWCCY 1 cut(s) 1291
Psp6I CCWGG 4 cut(s) 478, 553, 904, 1941
PspGI CCWGG 4 cut(s) 478, 553, 904, 1941
PspN4I GGNNCC 3 cut(s) 850, 1207, 1934
PspPI GGNCC 6 cut(s) 346, 656, 1206, 1291, 1933, 2251
PspPPI RGGWCCY 1 cut(s) 1291
PstNI CAGNNNCTG 1 cut(s) 470
PsuI RGATCY 3 cut(s) 1033, 1216, 1849
PsyI GACNNNGTC 1 cut(s) 2150
RsaI GTAC 1 cut(s) 164
RsaNI GTAC 1 cut(s) 163
RseI CAYNNNNRTG 1 cut(s) 846
SacI GAGCTC 1 cut(s) 2646
SalI GTCGAC 2 cut(s) 2443, 2449
SaqAI TTAA 6 cut(s) 527, 879, 1359, 1446, 1757, 2334
SatI GCNGC 4 cut(s) 1461, 1660, 1706, 2318
Sau3AI GATC 6 cut(s) 583, 1033, 1216, 1441, 1849, 2043
Sau96I GGNCC 6 cut(s) 346, 656, 1206, 1291, 1933, 2251
SchI GAGTC 2 cut(s) 1715, 1817
ScrFI CCNGG 7 cut(s) 144, 413, 480, 555, 906, 1424, 1943
SduI GDGCHC 1 cut(s) 2646
SfaNI GCATC 7 cut(s) 640, 769, 1381, 1471, 1867, 2085, 2198
SfcI CTRYAG 3 cut(s) 462, 924, 2342
SgrDI CGTCGACG 2 cut(s) 2443, 2449
SinI GGWCC 4 cut(s) 346, 1291, 1933, 2251
SmiMI CAYNNNNRTG 1 cut(s) 846
SmlI CTYRAG 4 cut(s) 1358, 1403, 1825, 2203
SmoI CTYRAG 4 cut(s) 1358, 1403, 1825, 2203
SseBI AGGCCT 1 cut(s) 868
SsiI CCGC 3 cut(s) 1394, 1706, 2394
SspI AATATT 3 cut(s) 611, 877, 1923
SspMI CTAG 4 cut(s) 14, 153, 515, 2177
SstI GAGCTC 1 cut(s) 2646
StuI AGGCCT 1 cut(s) 868
StyD4I CCNGG 7 cut(s) 142, 411, 478, 553, 904, 1422, 1941
StyI CCWWGG 2 cut(s) 659, 1498
TaaI ACNGT 3 cut(s) 208, 342, 472
TaiI ACGT 3 cut(s) 168, 2450, 2456
TaqI TCGA 8 cut(s) 87, 582, 1046, 1440, 1590, 2444, 2450, 2456
TaqII GACCGA 2 cut(s) 334, 2268
TauI GCSGC 1 cut(s) 1708
TfiI GAWTC 9 cut(s) 149, 589, 746, 937, 1587, 1639, 2168, 2547, 2570
Tru1I TTAA 6 cut(s) 527, 879, 1359, 1446, 1757, 2334
Tru9I TTAA 6 cut(s) 527, 879, 1359, 1446, 1757, 2334
TscAI CASTG 5 cut(s) 45, 213, 797, 1146, 1519
TseFI GTSAC 4 cut(s) 540, 827, 1749, 1983
TseI GCWGC 3 cut(s) 1460, 1659, 2317
Tsp45I GTSAC 4 cut(s) 540, 827, 1749, 1983
TspDTI ATGAA 9 cut(s) 81, 281, 500, 755, 1233, 1805, 2160, 2211, 2269
TspGWI ACGGA 1 cut(s) 2473
TspRI CASTG 5 cut(s) 45, 213, 797, 1146, 1519
Tth111I GACNNNGTC 1 cut(s) 2150
Van91I CCANNNNNTGG 2 cut(s) 60, 1942
Vha464I CTTAAG 1 cut(s) 1358
VpaK11BI GGWCC 4 cut(s) 346, 1291, 1933, 2251
VspI ATTAAT 2 cut(s) 879, 2334
XapI RAATTY 3 cut(s) 1239, 1595, 1896
XbaI TCTAGA 1 cut(s) 514
XceI RCATGY 4 cut(s) 1192, 1705, 1984, 2126
XcmI CCANNNNNNNNNTGG 2 cut(s) 164, 1505
XmiI GTMKAC 5 cut(s) 326, 618, 2444, 2450, 2587
XspI CTAG 4 cut(s) 14, 153, 515, 2177
ZraI GACGTC 2 cut(s) 2448, 2454
Zsp2I ATGCAT 2 cut(s) 2100, 2213
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.