Rmu_sc0003884.1_g000004

serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0003884.1
OG0000112
Physical Location & Seq
Forward (+)
12845 .. 16046
3202 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0003884.1_g000004.1.cds

Sequence Viewer

Length: 2463 bp
atgccactgtttcataccaacaaagttgcaaatgcccagaaaatgttattcaaagctctgcttctcttcctcctcttccgattttgcgaatccagggacaccataacatggaaccaagaacaactgaaggatgatggtggagttttggtgtccaaacagaacaagtttgaactgggtttcttcagccccggaaattctagctaccggtatgttggaatttggtattctcagactagagtatctaataaaatagtggtgtgggttgcaaacaggaacaatcccatcaatgatacctctggtgtgctcacaataaacaggtatggagaactagtcctttatgcttataacatggagagcagtcctatttggtctactaatgtgtcgcggtcggttcaaaatgttaacacaagcactttatctgcacagcttttagatacaggaaatctagttgtgttccaggatgataataatgaaaactttttatggcaaagttttgatcatcccacagatactttaattccaggtatgaaagttgggatgaattggaaaactgggcaagaatgggttataacatcttggaagtcacaagatgaccctggaactggggactataccttaaggctctatccaaatcagattgcatccccccaattttttatgtacaagggttcgagtaagtattggcgaagtgattcagggacaacgggtttcgttactaatcaagaggaaacttattatcccatgaataactccaatgcaattacaagagcaacagtgattgattctgcggtagaaggttttacatgggatgatgttggccttcaatggaaggtaggcttctctgcaccgaagtcccggtgtgactggtatggagagtgcggtgccaacagcaaatgtctccctgacaatgttagtatgttttggtgtgaatgtttaccagggtatgtacctaattctataagtgattggaatcataaaaatgggtcaggtggatgtgtgagtaatcgacttggtttgttgaagtgtggagatggagacgggtttgtgaaggtggcaagagttaaatatcctgacacatcgatagtagcattgtcaaaatcaggtatgagtgccaaagagtgtgagcaggagtgcctaagatattgttcttgcaccgcatatttgagcactgaaaatgaagggcgtgttgattgcttgacatggtatgatgacttgatggacattaaaatgtacacagagattggacaagatctctacgttcgtgtgaatgcgatcgtgttagcggcaaatgccagaagatcagaaggtttcttggaaaggaggggtatgctggctattccaatactgtctgctgtgctagcattggtactaatcattatgcttgcatgttggtggcgcaagaacaggaacacaaaagactttgtggaggcagaggagcttgtggaaaaacagagacaccctgaattgcaatttttcgatcttgacacaatagttgcagcaacagaccacttctctcgtgtcaatgaacttggccatggtggatttggctctgtttataagggtcagctaccaaatgaacagaaagttgctgtgaaaagattgtcccaaacttcaggacaagggatcgaagaattcaaaaatgaagttgcacttatagcaagacttcaacacaggaatcttgtgaaacttttaggctgttgtataaagggagaagaaaggatgttagtgctagaatacatgcctaacaaaagcttgaactcctttctttttgataacacaagacggtcctttttggattgggaaaagcgctttgaaattatcaacgggattgctcgtgggattctgtatcttcaccaagactcaagattgaggatcatccatagagatctgaaaactagcaatattcttctagatgctgagatgaacccaaaaatttctgattttggcatggctagaatattccacagagatcaactacaagataagacgagccgaattgttggaacatatggctacatgtcaccagagtacgcagtatttggaagattttccatgaaatctgatgtatttagttttgggatcataatgttggagattgtaagtggccggaaaaacaatgattctgatttggaggatccttccatgaacttgataggacgtgtttgggagctttggggaaaaggcagagccttagatattgttgattccacactaaagtcatatcaacctaatgaagtcatgagatgcatacaagttgcgctcttgtgtgtacaagaagattcaaaggaccgacctgccatgtcagccattgttttcatgttgagtggtgaatcatctcctccattgcctaagcatccagcatttgtttacagaagagattccggcattgatgttgatccattacttccaaacagatcttattctataaatgacttgacaataactacaatggaagctcgataa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
B_lectin DUF3403 PAN_2 Pkinase Pkinase_Tyr S_locus_glycop

Protein Analysis

820

Amino Acids

93.12

Weight (kDa)

6.21

Isoelectric Point (pI)

41.29

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000112)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g03320 FvH4_3g03322 FvH4_3g03323 FvH4_3g03340 FvH4_3g03350 FvH4_3g03351 FvH4_3g03370 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g06140 FvH4_6g00257 FvH4_6g00257 FvH4_6g00270 FvH4_6g00300 FvH4_6g20800 FvH4_6g20800 FvH4_6g20800 FvH4_6g20800 FvH4_6g20800
malus_domestica MD05G1232700.v1.1 MD05G1327700.v1.1 MD05G1327800.v1.1 MD05G1327900.v1.1 MD05G1328000.v1.1 MD05G1328200.v1.1 MD05G1328300.v1.1 MD05G1328500.v1.1 MD05G1332000.v1.1 MD05G1332100.v1.1 MD10G1307600.v1.1 MD10G1307800.v1.1
prunus_persica Prupe.4G031900_v2.0.a1 Prupe.4G032000_v2.0.a1 Prupe.4G032000_v2.0.a1 Prupe.4G032100_v2.0.a1 Prupe.4G032200_v2.0.a1 Prupe.4G032200_v2.0.a1 Prupe.4G032200_v2.0.a1
pyrus_communis pycom05g30180 pycom05g30190 pycom05g30200 pycom05g30210 pycom10g25920 pycom10g25930
rosa_chinensis RchiOBHm_Chr2g0130831 RchiOBHm_Chr2g0132531 RchiOBHm_Chr2g0132541 RchiOBHm_Chr3g0455681 RchiOBHm_Chr3g0476681 RchiOBHm_Chr3g0476761 RchiOBHm_Chr3g0476771 RchiOBHm_Chr3g0476791 RchiOBHm_Chr3g0476801 RchiOBHm_Chr3g0476811 RchiOBHm_Chr4g0413551 RchiOBHm_Chr4g0413561 RchiOBHm_Chr5g0002911 RchiOBHm_Chr5g0005071 RchiOBHm_Chr5g0005101 RchiOBHm_Chr5g0005111 RchiOBHm_Chr5g0005121 RchiOBHm_Chr5g0005131 RchiOBHm_Chr5g0005141 RchiOBHm_Chr5g0005161 RchiOBHm_Chr5g0005171 RchiOBHm_Chr5g0006341 RchiOBHm_Chr5g0046161 RchiOBHm_Chr5g0046171 RchiOBHm_Chr5g0046181 RchiOBHm_Chr5g0046221 RchiOBHm_Chr5g0046231 RchiOBHm_Chr7g0224061 RchiOBHm_Chr7g0224081 RchiOBHm_Chr7g0224101 RchiOBHm_Chr7g0224111 RchiOBHm_Chr7g0224121
rosa_laevigata RLG00000010193 RLG00000019146 RLG00000019148 RLG00000019149 RLG00000019150 RLG00000023750 RLG00000023751 RLG00000023753 RLG00000029486 RLG00000031068 RLG00000031069 RLG00000031284 RLG00000031285 RLG00000031286 RLG00000031289 RLG00000031290 RLG00000031291 RLG00000031292 RLG00000031293 RLG00000031294 RLG00000031295 RLG00000031296 RLG00000031297 RLG00000031363 RLG00000032618 RLG00000032619
rosa_multiflora Rmu_co8147584.1_g000001 Rmu_co8205828.1_g000001 Rmu_co8373645.1_g000001 Rmu_co8407679.1_g000001 Rmu_co8452561.1_g000001 Rmu_sc0001035.1_g000076 Rmu_sc0001884.1_g000026 Rmu_sc0001884.1_g000027 Rmu_sc0001884.1_g000035 Rmu_sc0002157.1_g000026 Rmu_sc0002399.1_g000006 Rmu_sc0002399.1_g000007 Rmu_sc0002883.1_g000010 Rmu_sc0003629.1_g000014 Rmu_sc0003884.1_g000004 Rmu_sc0007865.1_g000005 Rmu_sc0008085.1_g000013 Rmu_sc0008085.1_g000014 Rmu_sc0008085.1_g000016 Rmu_sc0008085.1_g000018 Rmu_sc0008432.1_g000004 Rmu_sc0008714.1_g000002 Rmu_sc0009296.1_g000008 Rmu_sc0009296.1_g000009 Rmu_sc0009296.1_g000011 Rmu_sc0010281.1_g000001 Rmu_sc0010281.1_g000002 Rmu_sc0010714.1_g000011 Rmu_sc0010714.1_g000016 Rmu_sc0011169.1_g000001 Rmu_sc0011169.1_g000007 Rmu_sc0013603.1_g000006 Rmu_sc0020478.1_g000003 Rmu_sc0020478.1_g000007 Rmu_sc0025106.1_g000012 Rmu_sc0032709.1_g000001 Rmu_sc0033028.1_g000001
rosa_roxburghii Rroxscaffold_1G00069570 Rroxscaffold_1G00069610 Rroxscaffold_1G00069620 Rroxscaffold_1G00070480 Rroxscaffold_1G00070490 Rroxscaffold_1G00070500 Rroxscaffold_1G00070510 Rroxscaffold_1G00070520 Rroxscaffold_1G00070530 Rroxscaffold_1G00070540 Rroxscaffold_1G00070550 Rroxscaffold_1G00070590 Rroxscaffold_1G00072950 Rroxscaffold_1G00073080 Rroxscaffold_2G00111810 Rroxscaffold_2G00111820 Rroxscaffold_2G00113530 Rroxscaffold_2G00113870 Rroxscaffold_6G00405010 Rroxscaffold_6G00405020 Rroxscaffold_6G00423590 Rroxscaffold_6G00424100
rosa_rugosa Rorug02G0293200 Rorug02G0293300 Rorug02G0293400 Rorug02G0305900 Rorug02G0305900 Rorug03G0009100 Rorug03G0157000 Rorug03G0157000 Rorug03G0304900 Rorug04G0400500 Rorug04G0415200 Rorug04G0415300 Rorug04G0415400 Rorug04G0415500 Rorug04G0421100 Rorug05G0068000 Rorug05G0068100 Rorug05G0068200 Rorug05G0068500 Rorug05G0224600 Rorug05G0224700
rosa_samantha Rh2CG331700 Rh2CG341600 Rh2CG341700 Rh2DG381200 Rh3DG071200 Rh3DG233400 Rh3DG233500 Rh3DG233600 Rh5AG043100 Rh5CG026000 Rh5CG047700 Rh5CG047800 Rh5CG047900 Rh5CG048000 Rh5CG048100 Rh5CG048300 Rh5CG056500 Rh5CG340500 Rh5CG340700 Rh5CG340800 Rh7AG365000
rosa_wichuraiana Rw0G002360 Rw0G002370 Rw0G012520 Rw0G018230 Rw0G019190 Rw2G027480 Rw2G029150 Rw3G005520 Rw3G005880 Rw3G005890 Rw3G018840 Rw3G018850 Rw3G018870 Rw3G018880 Rw3G020740 Rw5G002190 Rw5G004180 Rw5G004190 Rw5G004890 Rw5G013960 Rw5G014000 Rw5G028610 Rw7G030910 Rw7G030920

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 3 cut(s) 345, 569, 1557
Acc36I ACCTGC 1 cut(s) 2302
AccB1I GGYRCC 1 cut(s) 881
AccB7I CCANNNNNTGG 1 cut(s) 108
AccI GTMKAC 1 cut(s) 371
AccII CGCG 1 cut(s) 385
AciI CCGC 5 cut(s) 385, 788, 879, 1155, 1283
AclWI GGATC 6 cut(s) 1631, 1880, 2087, 2129, 2142, 2390
AcoI YGGCCR 2 cut(s) 1531, 2104
AcsI RAATTY 4 cut(s) 193, 216, 1631, 1932
AcuI CTGAAG 3 cut(s) 146, 166, 1596
AfaI GTAC 6 cut(s) 662, 948, 1232, 1368, 2030, 2271
AfeI AGCGCT 1 cut(s) 1808
AfiI CCNNNNNNNGG 2 cut(s) 108, 602
AflII CTTAAG 1 cut(s) 616
AflIII ACRYGT 2 cut(s) 2016, 2158
AgeI ACCGGT 1 cut(s) 204
AhlI ACTAGT 1 cut(s) 328
AjiI CACGTC 1 cut(s) 2159
AjnI CCWGG 5 cut(s) 92, 456, 520, 595, 937
AluBI AGCT 8 cut(s) 56, 201, 427, 1438, 1567, 1752, 2170, 2456
AluI AGCT 8 cut(s) 56, 201, 427, 1438, 1567, 1752, 2170, 2456
Alw21I GWGCWC 2 cut(s) 306, 1169
Alw26I GTCTC 3 cut(s) 902, 1029, 1447
AlwI GGATC 6 cut(s) 1631, 1880, 2087, 2129, 2142, 2390
Aor51HI AGCGCT 1 cut(s) 1808
AoxI GGCC 3 cut(s) 817, 1531, 2104
ApeKI GCWGC 1 cut(s) 1496
ApoI RAATTY 4 cut(s) 193, 216, 1631, 1932
AsiGI ACCGGT 1 cut(s) 204
Asp700I GAANNNNTTC 3 cut(s) 691, 2047, 2377
AspLEI GCGC 3 cut(s) 1398, 1809, 2260
AspS9I GGNCC 2 cut(s) 1785, 2287
AsuC2I CCSGG 2 cut(s) 189, 856
AsuHPI GGTGA 3 cut(s) 1844, 2013, 2339
AsuNHI GCTAGC 1 cut(s) 1357
AvaII GGWCC 2 cut(s) 1785, 2287
BaeI ACNNNNGTAYC 2 cut(s) 222, 255
BalI TGGCCA 1 cut(s) 1533
BamHI GGATCC 1 cut(s) 2134
BanI GGYRCC 1 cut(s) 881
BauI CACGAG 2 cut(s) 1515, 1833
Bbv12I GWGCWC 2 cut(s) 306, 1169
BbvI GCAGC 1 cut(s) 1508
BccI CCATC 4 cut(s) 128, 290, 1025, 1210
BciT130I CCWGG 5 cut(s) 94, 458, 522, 597, 939
BclI TGATCA 1 cut(s) 496
BcnI CCSGG 2 cut(s) 189, 856
BcoDI GTCTC 3 cut(s) 902, 1029, 1447
BcuI ACTAGT 1 cut(s) 328
BfaI CTAG 9 cut(s) 198, 234, 329, 446, 1358, 1730, 1896, 1910, 1953
BfoI RGCGCY 1 cut(s) 1810
BfrI CTTAAG 1 cut(s) 616
BfuAI ACCTGC 1 cut(s) 2302
BglII AGATCT 3 cut(s) 1249, 1885, 2414
BisI GCNGC 2 cut(s) 1284, 1497
BlsI GCNGC 2 cut(s) 1285, 1498
Bme1390I CCNGG 7 cut(s) 94, 189, 458, 522, 597, 856, 939
Bme18I GGWCC 2 cut(s) 1785, 2287
BmgBI CACGTC 1 cut(s) 2159
BmgT120I GGNCC 2 cut(s) 1785, 2287
BmiI GGNNCC 3 cut(s) 113, 883, 2136
BmrFI CCNGG 7 cut(s) 94, 189, 458, 522, 597, 856, 939
BmrI ACTGGG 3 cut(s) 182, 561, 612
BmsI GCATC 4 cut(s) 650, 1903, 2234, 2362
BmtI GCTAGC 1 cut(s) 1361
BmuI ACTGGG 3 cut(s) 182, 561, 612
Bpu10I CCTNAGC 1 cut(s) 2349
BpuEI CTTGAG 1 cut(s) 1846
BpuMI CCSGG 2 cut(s) 189, 856
Bsa29I ATCGAT 1 cut(s) 1079
BsaBI GATNNNNATC 2 cut(s) 969, 2394
BsaJI CCNNGG 5 cut(s) 93, 187, 595, 938, 1534
BsaWI WCCGGW 1 cut(s) 204
BsaXI ACNNNNNCTCC 4 cut(s) 132, 162, 315, 345
Bsc4I CCNNNNNNNGG 2 cut(s) 108, 602
Bse118I RCCGGY 1 cut(s) 204
Bse1I ACTGG 4 cut(s) 177, 556, 607, 869
Bse3DI GCAATG 1 cut(s) 2342
Bse8I GATNNNNATC 2 cut(s) 969, 2394
BseBI CCWGG 5 cut(s) 94, 458, 522, 597, 939
BseCI ATCGAT 1 cut(s) 1079
BseDI CCNNGG 5 cut(s) 93, 187, 595, 938, 1534
BseJI GATNNNNATC 2 cut(s) 969, 2394
BseLI CCNNNNNNNGG 2 cut(s) 108, 602
BseMI GCAATG 1 cut(s) 2342
BseMII CTCAG 2 cut(s) 242, 1908
BseNI ACTGG 4 cut(s) 177, 556, 607, 869
BseRI GAGGAG 3 cut(s) 62, 1448, 2328
BseXI GCAGC 1 cut(s) 1508
BsgI GTGCAG 2 cut(s) 405, 828
Bsh1236I CGCG 1 cut(s) 385
Bsh1285I CGRYCG 2 cut(s) 389, 1275
BshFI GGCC 3 cut(s) 819, 1533, 2106
BshNI GGYRCC 1 cut(s) 881
BshTI ACCGGT 1 cut(s) 204
BshVI ATCGAT 1 cut(s) 1079
BsiEI CGRYCG 2 cut(s) 389, 1275
BsiHKAI GWGCWC 2 cut(s) 306, 1169
BsiSI CCGG 5 cut(s) 189, 205, 856, 2107, 2382
BslFI GGGAC 5 cut(s) 110, 620, 712, 838, 1588
BslI CCNNNNNNNGG 2 cut(s) 108, 602
BsmAI GTCTC 3 cut(s) 902, 1029, 1447
BsmBI CGTCTC 1 cut(s) 1029
BsmFI GGGAC 5 cut(s) 110, 620, 712, 838, 1588
BsmI GAATGC 1 cut(s) 1273
BsnI GGCC 3 cut(s) 819, 1533, 2106
Bsp1286I GDGCHC 2 cut(s) 306, 1169
Bsp1407I TGTACA 3 cut(s) 660, 1230, 2269
Bsp19I CCATGG 1 cut(s) 1534
BspACI CCGC 5 cut(s) 385, 788, 879, 1155, 1283
BspANI GGCC 3 cut(s) 819, 1533, 2106
BspCNI CTCAG 2 cut(s) 241, 1909
BspDI ATCGAT 1 cut(s) 1079
BspFNI CGCG 1 cut(s) 385
BspHI TCATGA 1 cut(s) 2238
BspLI GGNNCC 3 cut(s) 113, 883, 2136
BspMI ACCTGC 1 cut(s) 2302
BspOI GCTAGC 1 cut(s) 1361
BspPI GGATC 6 cut(s) 1631, 1880, 2087, 2129, 2142, 2390
BspT107I GGYRCC 1 cut(s) 881
BspTI CTTAAG 1 cut(s) 616
BsrDI GCAATG 1 cut(s) 2342
BsrFI RCCGGY 1 cut(s) 204
BsrGI TGTACA 3 cut(s) 660, 1230, 2269
BsrI ACTGG 4 cut(s) 177, 556, 607, 869
BssAI RCCGGY 1 cut(s) 204
BssECI CCNNGG 5 cut(s) 93, 187, 595, 938, 1534
BssSI CACGAG 2 cut(s) 1515, 1833
BssT1I CCWWGG 1 cut(s) 1534
Bst2BI CACGAG 2 cut(s) 1515, 1833
Bst2UI CCWGG 5 cut(s) 94, 458, 522, 597, 939
Bst4CI ACNGT 4 cut(s) 9, 775, 1347, 1785
Bst6I CTCTTC 3 cut(s) 71, 80, 2368
BstAFI CTTAAG 1 cut(s) 616
BstAUI TGTACA 3 cut(s) 660, 1230, 2269
BstC8I GCNNGC 3 cut(s) 1332, 1359, 1383
BstDEI CTNAG 5 cut(s) 228, 1136, 1917, 2191, 2349
BstDSI CCRYGG 1 cut(s) 1534
BstFNI CGCG 1 cut(s) 385
BstH2I RGCGCY 1 cut(s) 1810
BstHHI GCGC 3 cut(s) 1398, 1809, 2260
BstMAI GTCTC 3 cut(s) 902, 1029, 1447
BstMCI CGRYCG 2 cut(s) 389, 1275
BstMWI GCNNNNNNNGC 4 cut(s) 1289, 1358, 1655, 2303
BstNI CCWGG 5 cut(s) 94, 458, 522, 597, 939
BstNSI RCATGY 3 cut(s) 1389, 1741, 2020
BstSCI CCNGG 7 cut(s) 92, 187, 456, 520, 595, 854, 937
BstUI CGCG 1 cut(s) 385
BstV1I GCAGC 1 cut(s) 1508
BstX2I RGATCY 4 cut(s) 1249, 1885, 2134, 2414
BstYI RGATCY 4 cut(s) 1249, 1885, 2134, 2414
Bsu15I ATCGAT 1 cut(s) 1079
BsuRI GGCC 3 cut(s) 819, 1533, 2106
BsuTUI ATCGAT 1 cut(s) 1079
BtgI CCRYGG 1 cut(s) 1534
BtrI CACGTC 1 cut(s) 2159
BtsIMutI CAGTG 3 cut(s) 5, 780, 1167
BveI ACCTGC 1 cut(s) 2302
Cac8I GCNNGC 3 cut(s) 1332, 1359, 1383
CciI TCATGA 1 cut(s) 2238
CfoI GCGC 3 cut(s) 1398, 1809, 2260
Cfr10I RCCGGY 1 cut(s) 204
Cfr13I GGNCC 2 cut(s) 1785, 2287
ClaI ATCGAT 1 cut(s) 1079
Csp6I GTAC 6 cut(s) 661, 947, 1231, 1367, 2029, 2270
CspAI ACCGGT 1 cut(s) 204
CviQI GTAC 6 cut(s) 661, 947, 1231, 1367, 2029, 2270
DdeI CTNAG 5 cut(s) 228, 1136, 1917, 2191, 2349
EaeI YGGCCR 2 cut(s) 1531, 2104
Eam1104I CTCTTC 3 cut(s) 71, 80, 2368
EarI CTCTTC 3 cut(s) 71, 80, 2368
Eco130I CCWWGG 1 cut(s) 1534
Eco47I GGWCC 2 cut(s) 1785, 2287
Eco47III AGCGCT 1 cut(s) 1808
Eco57I CTGAAG 3 cut(s) 146, 166, 1596
EcoRI GAATTC 1 cut(s) 1631
EcoRII CCWGG 5 cut(s) 92, 456, 520, 595, 937
EcoT14I CCWWGG 1 cut(s) 1534
EcoT22I ATGCAT 1 cut(s) 2249
ErhI CCWWGG 1 cut(s) 1534
Esp3I CGTCTC 1 cut(s) 1029
FalI AAGNNNNNCTT 6 cut(s) 45, 77, 821, 853, 1635, 1667
FaqI GGGAC 5 cut(s) 110, 620, 712, 838, 1588
FauNDI CATATG 1 cut(s) 2008
FbaI TGATCA 1 cut(s) 496
FblI GTMKAC 1 cut(s) 371
Fnu4HI GCNGC 2 cut(s) 1284, 1497
Fsp4HI GCNGC 2 cut(s) 1284, 1497
FspBI CTAG 9 cut(s) 198, 234, 329, 446, 1358, 1730, 1896, 1910, 1953
GlaI GCGC 3 cut(s) 1397, 1808, 2259
GluI GCNGC 2 cut(s) 1284, 1497
HaeII RGCGCY 1 cut(s) 1810
HaeIII GGCC 3 cut(s) 819, 1533, 2106
HapII CCGG 5 cut(s) 189, 205, 856, 2107, 2382
HhaI GCGC 3 cut(s) 1398, 1809, 2260
Hin6I GCGC 3 cut(s) 1396, 1807, 2258
HinP1I GCGC 3 cut(s) 1396, 1807, 2258
HincII GTYRAC 1 cut(s) 403
HindII GTYRAC 1 cut(s) 403
HindIII AAGCTT 1 cut(s) 1750
HpaI GTTAAC 1 cut(s) 403
HpaII CCGG 5 cut(s) 189, 205, 856, 2107, 2382
HphI GGTGA 3 cut(s) 1844, 2013, 2339
Hpy166II GTNNAC 6 cut(s) 372, 403, 935, 1233, 2270, 2368
Hpy188I TCNGA 8 cut(s) 80, 231, 636, 1303, 1890, 1939, 2062, 2125
Hpy188III TCNNGA 7 cut(s) 722, 1070, 1481, 1614, 1863, 1910, 2239
Hpy8I GTNNAC 6 cut(s) 372, 403, 935, 1233, 2270, 2368
HpyAV CCTTC 8 cut(s) 121, 788, 823, 830, 1042, 1172, 1298, 2148
HpyCH4III ACNGT 4 cut(s) 9, 775, 1347, 1785
HpyCH4IV ACGT 2 cut(s) 1257, 2158
HpyF10VI GCNNNNNNNGC 4 cut(s) 1289, 1358, 1655, 2303
HpyF3I CTNAG 5 cut(s) 228, 1136, 1917, 2191, 2349
HpySE526I ACGT 2 cut(s) 1257, 2158
HspAI GCGC 3 cut(s) 1396, 1807, 2258
Ksp22I TGATCA 1 cut(s) 496
KspAI GTTAAC 1 cut(s) 403
LmnI GCTCC 2 cut(s) 1435, 2167
Lsp1109I GCAGC 1 cut(s) 1508
LweI GCATC 4 cut(s) 650, 1903, 2234, 2362
MaeI CTAG 9 cut(s) 198, 234, 329, 446, 1358, 1730, 1896, 1910, 1953
MaeII ACGT 2 cut(s) 1257, 2158
MaeIII GTNAC 4 cut(s) 582, 712, 860, 2019
MflI RGATCY 4 cut(s) 1249, 1885, 2134, 2414
MhlI GDGCHC 2 cut(s) 306, 1169
MlsI TGGCCA 1 cut(s) 1533
MluNI TGGCCA 1 cut(s) 1533
MlyI GAGTC 1 cut(s) 1853
MmeI TCCRAC 3 cut(s) 193, 1981, 2070
Mox20I TGGCCA 1 cut(s) 1533
Mph1103I ATGCAT 1 cut(s) 2249
MroXI GAANNNNTTC 3 cut(s) 691, 2047, 2377
MscI TGGCCA 1 cut(s) 1533
MseI TTAA 5 cut(s) 402, 515, 617, 1062, 1224
MslI CAYNNNNRTG 3 cut(s) 978, 1226, 1390
Msp20I TGGCCA 1 cut(s) 1533
MspCI CTTAAG 1 cut(s) 616
MspI CCGG 5 cut(s) 189, 205, 856, 2107, 2382
MspR9I CCNGG 7 cut(s) 94, 189, 458, 522, 597, 856, 939
Mva1269I GAATGC 1 cut(s) 1273
MvaI CCWGG 5 cut(s) 94, 458, 522, 597, 939
MvnI CGCG 1 cut(s) 385
MwoI GCNNNNNNNGC 4 cut(s) 1289, 1358, 1655, 2303
NciI CCSGG 2 cut(s) 189, 856
NcoI CCATGG 1 cut(s) 1534
NdeI CATATG 1 cut(s) 2008
NheI GCTAGC 1 cut(s) 1357
NlaIV GGNNCC 3 cut(s) 113, 883, 2136
NmuCI GTSAC 3 cut(s) 582, 860, 2019
NsiI ATGCAT 1 cut(s) 2249
NspI RCATGY 3 cut(s) 1389, 1741, 2020
PagI TCATGA 1 cut(s) 2238
PciI ACATGT 1 cut(s) 2016
PctI GAATGC 1 cut(s) 1273
PdmI GAANNNNTTC 3 cut(s) 691, 2047, 2377
PflMI CCANNNNNTGG 1 cut(s) 108
PfoI TCCNGGA 1 cut(s) 456
PinAI ACCGGT 1 cut(s) 204
PkrI GCNGC 2 cut(s) 1285, 1498
Ple19I CGATCG 1 cut(s) 1275
PleI GAGTC 1 cut(s) 1853
PpsI GAGTC 1 cut(s) 1853
PscI ACATGT 1 cut(s) 2016
PsiI TTATAA 3 cut(s) 345, 569, 1557
Psp6I CCWGG 5 cut(s) 92, 456, 520, 595, 937
PspGI CCWGG 5 cut(s) 92, 456, 520, 595, 937
PspN4I GGNNCC 3 cut(s) 113, 883, 2136
PspPI GGNCC 2 cut(s) 1785, 2287
PsuI RGATCY 4 cut(s) 1249, 1885, 2134, 2414
PvuI CGATCG 1 cut(s) 1275
RsaI GTAC 6 cut(s) 662, 948, 1232, 1368, 2030, 2271
RsaNI GTAC 6 cut(s) 661, 947, 1231, 1367, 2029, 2270
RseI CAYNNNNRTG 3 cut(s) 978, 1226, 1390
SaqAI TTAA 5 cut(s) 402, 515, 617, 1062, 1224
SatI GCNGC 2 cut(s) 1284, 1497
Sau96I GGNCC 2 cut(s) 1785, 2287
SchI GAGTC 1 cut(s) 1853
ScrFI CCNGG 7 cut(s) 94, 189, 458, 522, 597, 856, 939
SduI GDGCHC 2 cut(s) 306, 1169
SfaNI GCATC 4 cut(s) 650, 1903, 2234, 2362
SinI GGWCC 2 cut(s) 1785, 2287
SmiMI CAYNNNNRTG 3 cut(s) 978, 1226, 1390
SmlI CTYRAG 2 cut(s) 616, 1861
SmoI CTYRAG 2 cut(s) 616, 1861
SpeI ACTAGT 1 cut(s) 328
SsiI CCGC 5 cut(s) 385, 788, 879, 1155, 1283
SspI AATATT 2 cut(s) 1903, 1959
SspMI CTAG 9 cut(s) 198, 234, 329, 446, 1358, 1730, 1896, 1910, 1953
StyD4I CCNGG 7 cut(s) 92, 187, 456, 520, 595, 854, 937
StyI CCWWGG 1 cut(s) 1534
TaaI ACNGT 4 cut(s) 9, 775, 1347, 1785
TaiI ACGT 2 cut(s) 1260, 2161
TaqI TCGA 6 cut(s) 671, 1006, 1079, 1476, 1626, 2458
TaqII GACCGA 1 cut(s) 2304
TatI WGTACW 3 cut(s) 660, 1230, 2269
TauI GCSGC 1 cut(s) 1286
Tru1I TTAA 5 cut(s) 402, 515, 617, 1062, 1224
Tru9I TTAA 5 cut(s) 402, 515, 617, 1062, 1224
TscAI CASTG 3 cut(s) 12, 780, 1174
TseFI GTSAC 3 cut(s) 582, 860, 2019
TseI GCWGC 1 cut(s) 1496
Tsp45I GTSAC 3 cut(s) 582, 860, 2019
TspRI CASTG 3 cut(s) 12, 780, 1174
Van91I CCANNNNNTGG 1 cut(s) 108
Vha464I CTTAAG 1 cut(s) 616
VpaK11BI GGWCC 2 cut(s) 1785, 2287
XapI RAATTY 4 cut(s) 193, 216, 1631, 1932
XbaI TCTAGA 1 cut(s) 1909
XceI RCATGY 3 cut(s) 1389, 1741, 2020
XcmI CCANNNNNNNNNTGG 1 cut(s) 1541
XmiI GTMKAC 1 cut(s) 371
XmnI GAANNNNTTC 3 cut(s) 691, 2047, 2377
XspI CTAG 9 cut(s) 198, 234, 329, 446, 1358, 1730, 1896, 1910, 1953
Zsp2I ATGCAT 1 cut(s) 2249
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.