divergent subfamily of APPLE domains
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Bet_v_1 | PF00407 | 2 - 151 | 6.6e-49 | Pathogenesis-related protein Bet v 1 family |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 55 |
| Acc36I | ACCTGC | 1 cut(s) | 55 |
| AciI | CCGC | 2 cut(s) | 131, 158 |
| AclWI | GGATC | 2 cut(s) | 169, 438 |
| AfaI | GTAC | 1 cut(s) | 401 |
| AgsI | TTSAA | 6 cut(s) | 11, 35, 73, 211, 298, 359 |
| AjiI | CACGTC | 1 cut(s) | 91 |
| AluBI | AGCT | 2 cut(s) | 294, 389 |
| AluI | AGCT | 2 cut(s) | 294, 389 |
| Alw26I | GTCTC | 1 cut(s) | 138 |
| AlwI | GGATC | 2 cut(s) | 169, 438 |
| AoxI | GGCC | 1 cut(s) | 243 |
| ApeKI | GCWGC | 1 cut(s) | 386 |
| AsuHPI | GGTGA | 2 cut(s) | 77, 247 |
| BbvI | GCAGC | 1 cut(s) | 398 |
| BcoDI | GTCTC | 1 cut(s) | 138 |
| BfuAI | ACCTGC | 1 cut(s) | 55 |
| BisI | GCNGC | 1 cut(s) | 387 |
| BlsI | GCNGC | 1 cut(s) | 388 |
| BmgBI | CACGTC | 1 cut(s) | 91 |
| BmrI | ACTGGG | 1 cut(s) | 157 |
| BmsI | GCATC | 1 cut(s) | 427 |
| BmuI | ACTGGG | 1 cut(s) | 157 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 67, 99 |
| BpmI | CTGGAG | 1 cut(s) | 375 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 117, 147 |
| Bse1I | ACTGG | 3 cut(s) | 115, 152, 280 |
| Bse3DI | GCAATG | 1 cut(s) | 339 |
| BseGI | GGATG | 1 cut(s) | 331 |
| BseMI | GCAATG | 1 cut(s) | 339 |
| BseNI | ACTGG | 3 cut(s) | 115, 152, 280 |
| BseRI | GAGGAG | 1 cut(s) | 392 |
| BseXI | GCAGC | 1 cut(s) | 398 |
| BshFI | GGCC | 1 cut(s) | 245 |
| BslFI | GGGAC | 1 cut(s) | 77 |
| BsmAI | GTCTC | 1 cut(s) | 138 |
| BsmFI | GGGAC | 1 cut(s) | 77 |
| BsnI | GGCC | 1 cut(s) | 245 |
| Bsp143I | GATC | 2 cut(s) | 161, 430 |
| BspACI | CCGC | 2 cut(s) | 131, 158 |
| BspANI | GGCC | 1 cut(s) | 245 |
| BspMI | ACCTGC | 1 cut(s) | 55 |
| BspPI | GGATC | 2 cut(s) | 169, 438 |
| BspQI | GCTCTTC | 1 cut(s) | 12 |
| BsrDI | GCAATG | 1 cut(s) | 339 |
| BsrI | ACTGG | 3 cut(s) | 115, 152, 280 |
| BssMI | GATC | 2 cut(s) | 161, 430 |
| Bst6I | CTCTTC | 2 cut(s) | 12, 192 |
| BstF5I | GGATG | 1 cut(s) | 331 |
| BstKTI | GATC | 2 cut(s) | 164, 433 |
| BstMAI | GTCTC | 1 cut(s) | 138 |
| BstMBI | GATC | 2 cut(s) | 161, 430 |
| BstV1I | GCAGC | 1 cut(s) | 398 |
| BstX2I | RGATCY | 2 cut(s) | 161, 430 |
| BstYI | RGATCY | 2 cut(s) | 161, 430 |
| BsuRI | GGCC | 1 cut(s) | 245 |
| BtrI | CACGTC | 1 cut(s) | 91 |
| BtsCI | GGATG | 1 cut(s) | 331 |
| BveI | ACCTGC | 1 cut(s) | 55 |
| Csp6I | GTAC | 1 cut(s) | 400 |
| CviAII | CATG | 2 cut(s) | 137, 456 |
| CviJI | RGCY | 7 cut(s) | 5, 26, 83, 245, 294, 301, 389 |
| CviKI_1 | RGCY | 7 cut(s) | 5, 26, 83, 245, 294, 301, 389 |
| CviQI | GTAC | 1 cut(s) | 400 |
| DpnI | GATC | 2 cut(s) | 163, 432 |
| DpnII | GATC | 2 cut(s) | 161, 430 |
| Eam1104I | CTCTTC | 2 cut(s) | 12, 192 |
| EarI | CTCTTC | 2 cut(s) | 12, 192 |
| FaeI | CATG | 2 cut(s) | 140, 459 |
| FaiI | YATR | 5 cut(s) | 138, 183, 248, 363, 457 |
| FaqI | GGGAC | 1 cut(s) | 77 |
| FatI | CATG | 2 cut(s) | 136, 455 |
| FauI | CCCGC | 1 cut(s) | 151 |
| Fnu4HI | GCNGC | 1 cut(s) | 387 |
| FokI | GGATG | 1 cut(s) | 338 |
| Fsp4HI | GCNGC | 1 cut(s) | 387 |
| GluI | GCNGC | 1 cut(s) | 387 |
| GsuI | CTGGAG | 1 cut(s) | 375 |
| HaeIII | GGCC | 1 cut(s) | 245 |
| Hin1II | CATG | 2 cut(s) | 140, 459 |
| HinfI | GANTC | 1 cut(s) | 76 |
| HphI | GGTGA | 2 cut(s) | 77, 247 |
| Hpy166II | GTNNAC | 2 cut(s) | 238, 315 |
| Hpy188I | TCNGA | 1 cut(s) | 255 |
| Hpy188III | TCNNGA | 3 cut(s) | 73, 392, 434 |
| Hpy8I | GTNNAC | 2 cut(s) | 238, 315 |
| HpyAV | CCTTC | 3 cut(s) | 134, 211, 260 |
| HpyCH4IV | ACGT | 1 cut(s) | 90 |
| HpyCH4V | TGCA | 3 cut(s) | 136, 185, 386 |
| HpySE526I | ACGT | 1 cut(s) | 90 |
| Hsp92II | CATG | 2 cut(s) | 140, 459 |
| Kzo9I | GATC | 2 cut(s) | 161, 430 |
| LguI | GCTCTTC | 1 cut(s) | 12 |
| LmnI | GCTCC | 1 cut(s) | 394 |
| LpnPI | CCDG | 6 cut(s) | 60, 65, 96, 133, 293, 405 |
| Lsp1109I | GCAGC | 1 cut(s) | 398 |
| LweI | GCATC | 1 cut(s) | 427 |
| MaeII | ACGT | 1 cut(s) | 90 |
| MalI | GATC | 2 cut(s) | 163, 432 |
| MboI | GATC | 2 cut(s) | 161, 430 |
| MboII | GAAGA | 2 cut(s) | 61, 209 |
| MflI | RGATCY | 2 cut(s) | 161, 430 |
| MluCI | AATT | 3 cut(s) | 30, 249, 368 |
| MlyI | GAGTC | 1 cut(s) | 85 |
| MmeI | TCCRAC | 1 cut(s) | 243 |
| MnlI | CCTC | 7 cut(s) | 16, 184, 193, 226, 322, 370, 373 |
| MseI | TTAA | 1 cut(s) | 168 |
| NdeII | GATC | 2 cut(s) | 161, 430 |
| NlaIII | CATG | 2 cut(s) | 140, 459 |
| PaqCI | CACCTGC | 1 cut(s) | 55 |
| PciSI | GCTCTTC | 1 cut(s) | 12 |
| PkrI | GCNGC | 1 cut(s) | 388 |
| PleI | GAGTC | 1 cut(s) | 84 |
| PpsI | GAGTC | 1 cut(s) | 84 |
| PsuI | RGATCY | 2 cut(s) | 161, 430 |
| RsaI | GTAC | 1 cut(s) | 401 |
| RsaNI | GTAC | 1 cut(s) | 400 |
| SapI | GCTCTTC | 1 cut(s) | 12 |
| SaqAI | TTAA | 1 cut(s) | 168 |
| SatI | GCNGC | 1 cut(s) | 387 |
| Sau3AI | GATC | 2 cut(s) | 161, 430 |
| SchI | GAGTC | 1 cut(s) | 85 |
| SetI | ASST | 9 cut(s) | 16, 21, 49, 93, 222, 237, 296, 384, 391 |
| SfaNI | GCATC | 1 cut(s) | 427 |
| Sse9I | AATT | 3 cut(s) | 30, 249, 368 |
| SsiI | CCGC | 2 cut(s) | 131, 158 |
| TaiI | ACGT | 1 cut(s) | 93 |
| TasI | AATT | 3 cut(s) | 30, 249, 368 |
| TatI | WGTACW | 1 cut(s) | 399 |
| Tru1I | TTAA | 1 cut(s) | 168 |
| Tru9I | TTAA | 1 cut(s) | 168 |
| TseI | GCWGC | 1 cut(s) | 386 |
| TspDTI | ATGAA | 2 cut(s) | 153, 436 |