RchiOBHm_Chr3g0476791

serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
3
OG0000112
Physical Location & Seq
Forward (+)
22755054 .. 22758855
3802 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ44218

Sequence Viewer

Length: 2163 bp
ATGAACAGGTATGGGGAATTAGCTCTTTATGCTTATAACATGGAGAGCATTCCTGTATGGTCTACAAATGTATCACAGTCGGTCCAAAACACAGACACCTTATATAGATATGTCCAGCTTTTAGATACTGGAAACTTAGTTCTGTTCCGGGATGGTAAAAATGGAAGCTTGATTTTATGGCAAAGTTTTGATTATCCTACAGATACTCTAATCCCAGGTATGAAATCTGGGTTGAATTGGAAAAAAGGTCTAGATTGGCATTTAACATCTTGGAAGTCACAAGATGACCCTGGGAAGGGGGACTATGCCTTTAGGGTCGATCCGAATCACAATGCTACTCCCCAATATTTTGTCTACAAGGGTTTCACTAAGCATTGGCGAATGGATGCAGGGCCATGGCCTAATTTTGTTAGTAATGCCAACGAAATGTATAATACCCTGCCTTATATGAGCAATGCTATTTCAATAGTAAGGATGAAGGATTCCGGGTTACTTCAGCACCTAACATGGAATGATGCTGACCATCAGTGGGTGGAAATGTGGTCTTCGCCGAAATACCCTTGTGACTGGTATGGACATTGTGGTGCCAACAGCAGATGTAGGCCTGACAATATTAATTTATTTGAGTGTGAGTGTATTCCAGGGTATGAGCCAAAATCTGTAGATGGTTGGAATCGGAGAGATGGAACAGACGGATGTGTGAGTAAACGAGTAAGAGTGTCCAAGTGTAGGAATGGAGAAGGGTTTGTGAAGGTGGCAAGGGTAAAAGATCCAGACACATCGAATGTAGCAAGGTTGAGAACAAGTATGAGTGCCAAAGAGTGTGAGCAGGAGTGCTTGAAAAATTGTTCTTGCACAGCGTATATGAGCATTACACTGGAAAGGGTTGCCAGTTGCTTGACATGGTATGATGACTTGATGGACATGTTAGTTTACACAGGGGTCGGACGAGATCTATATGTTCGTGTGGATAAAATCTCATTAGCTGAGGCCAGAAACTCACAAGGTTTCTTCAGGAGTGGCAAGGTCCTTATTCCAGTACTAACTGCTCTGGTGGCACTACTACTAATCATTATACTTTCCTTGTGGTTGCTTAAGAAAAAGAGGAAGACAAGAGACTATCTGGATGCGGAGGAACTTGAGGAAACTAAGAGACACCCAGAATTGCAATTTTTCGATCTTAACACACTGATAGCAGCCACAGATAACTTCTCTGATGCCAATAAACTTGGCCAAGGTGGTTTTGGCAGTGTTTATAAGGGCGAATTACCAAACGAACAAAAAGTTGCTATAAAAAGATTGTCTAGAACTTCAGGACAGGGAATCGAAGAATTCAAAAACGAAGTTGCACTAATAGCCAGACTTCAGCACAGGAATCTTGTGAAACTTTTAGGCTGCTGTATAAAGGGAGAAGAAAGGATATTGGTTCTGGAATACATGCCGAACAAAAGCTTGGACTCCTTTCTTTTTGATAACACAAGGAGGTCACTCTTAAATTGGGAAAAGCGTTTTGAAATTATCAATGGGGTTGCTCGTGGGGTTCTATATCTTCATCGGGACTCAAGATTGAGGGTTATCCATAGGGATCTAAAACCCGGTAATGTCCTTCTAGATGCCGAGTTAGACCCAAAAATTTCTGATTTCGGCATGGCAAGAATATTTCAAGGGGACCAACTCCTGGAAAAGACAAACAGAGTTGTCGGAACATATGGGTACATGTCACCGGAATATGCAGTATTTGGGAGATTTTCTACGAAATCGGATGTGTTTAGTTTTGGGATCATACTATTGGAGATTATTAGTGGCAAGAGAAACAATGGTTGTTCTGAGATGCATTATTCCATAAACTTGATAGGACATGTATGGCAACTTTGGGTAGAAGACAGAGTCTTGGAAATTGTGGATTCATCACTAGAGATTTATCAGCTTGATGAAGTCTTGAGATGCATTCAAGTGGGGCTTTTGTGCGTGCAAGAAGATTTGAAGGACCGACCAGCCATGTCAGCCGTCGTGTTCATGTTGAGTGGTGAAACATCTCTTCCATCTCCTAAGCAGCCTGCATTTGTCTTCAGAACAAGTTCCAGCATTGTTGATGATCCCTTCATTCCAAATGAATCATATTCTAGTAATAGTTTGACAATAACTAACATGGAAGCTCGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
B_lectin DUF3403 PAN_2 Pkinase Pkinase_Tyr S_locus_glycop

Protein Analysis

720

Amino Acids

82.16

Weight (kDa)

6.66

Isoelectric Point (pI)

42.28

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 3 - 92 6.7e-21 D-mannose binding lectin
S_locus_glycop PF00954 135 - 220 5.7e-15 S-locus glycoprotein domain
PAN_2 PF08276 243 - 309 3.2e-16 PAN-like domain
Pkinase PF00069 405 - 604 4.1e-44 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 408 - 671 1.6e-48 Protein tyrosine and serine/threonine kinase
DUF3403 PF11883 677 - 720 3.2e-06 Domain of unknown function (DUF3403)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000112)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g03320 FvH4_3g03322 FvH4_3g03323 FvH4_3g03340 FvH4_3g03350 FvH4_3g03351 FvH4_3g03370 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g06140 FvH4_6g00257 FvH4_6g00257 FvH4_6g00270 FvH4_6g00300 FvH4_6g20800 FvH4_6g20800 FvH4_6g20800 FvH4_6g20800 FvH4_6g20800
malus_domestica MD05G1232700.v1.1 MD05G1327700.v1.1 MD05G1327800.v1.1 MD05G1327900.v1.1 MD05G1328000.v1.1 MD05G1328200.v1.1 MD05G1328300.v1.1 MD05G1328500.v1.1 MD05G1332000.v1.1 MD05G1332100.v1.1 MD10G1307600.v1.1 MD10G1307800.v1.1
prunus_persica Prupe.4G031900_v2.0.a1 Prupe.4G032000_v2.0.a1 Prupe.4G032000_v2.0.a1 Prupe.4G032100_v2.0.a1 Prupe.4G032200_v2.0.a1 Prupe.4G032200_v2.0.a1 Prupe.4G032200_v2.0.a1
pyrus_communis pycom05g30180 pycom05g30190 pycom05g30200 pycom05g30210 pycom10g25920 pycom10g25930
rosa_chinensis RchiOBHm_Chr2g0130831 RchiOBHm_Chr2g0132531 RchiOBHm_Chr2g0132541 RchiOBHm_Chr3g0455681 RchiOBHm_Chr3g0476681 RchiOBHm_Chr3g0476761 RchiOBHm_Chr3g0476771 RchiOBHm_Chr3g0476791 RchiOBHm_Chr3g0476801 RchiOBHm_Chr3g0476811 RchiOBHm_Chr4g0413551 RchiOBHm_Chr4g0413561 RchiOBHm_Chr5g0002911 RchiOBHm_Chr5g0005071 RchiOBHm_Chr5g0005101 RchiOBHm_Chr5g0005111 RchiOBHm_Chr5g0005121 RchiOBHm_Chr5g0005131 RchiOBHm_Chr5g0005141 RchiOBHm_Chr5g0005161 RchiOBHm_Chr5g0005171 RchiOBHm_Chr5g0006341 RchiOBHm_Chr5g0046161 RchiOBHm_Chr5g0046171 RchiOBHm_Chr5g0046181 RchiOBHm_Chr5g0046221 RchiOBHm_Chr5g0046231 RchiOBHm_Chr7g0224061 RchiOBHm_Chr7g0224081 RchiOBHm_Chr7g0224101 RchiOBHm_Chr7g0224111 RchiOBHm_Chr7g0224121
rosa_laevigata RLG00000010193 RLG00000019146 RLG00000019148 RLG00000019149 RLG00000019150 RLG00000023750 RLG00000023751 RLG00000023753 RLG00000029486 RLG00000031068 RLG00000031069 RLG00000031284 RLG00000031285 RLG00000031286 RLG00000031289 RLG00000031290 RLG00000031291 RLG00000031292 RLG00000031293 RLG00000031294 RLG00000031295 RLG00000031296 RLG00000031297 RLG00000031363 RLG00000032618 RLG00000032619
rosa_multiflora Rmu_co8147584.1_g000001 Rmu_co8205828.1_g000001 Rmu_co8373645.1_g000001 Rmu_co8407679.1_g000001 Rmu_co8452561.1_g000001 Rmu_sc0001035.1_g000076 Rmu_sc0001884.1_g000026 Rmu_sc0001884.1_g000027 Rmu_sc0001884.1_g000035 Rmu_sc0002157.1_g000026 Rmu_sc0002399.1_g000006 Rmu_sc0002399.1_g000007 Rmu_sc0002883.1_g000010 Rmu_sc0003629.1_g000014 Rmu_sc0003884.1_g000004 Rmu_sc0007865.1_g000005 Rmu_sc0008085.1_g000013 Rmu_sc0008085.1_g000014 Rmu_sc0008085.1_g000016 Rmu_sc0008085.1_g000018 Rmu_sc0008432.1_g000004 Rmu_sc0008714.1_g000002 Rmu_sc0009296.1_g000008 Rmu_sc0009296.1_g000009 Rmu_sc0009296.1_g000011 Rmu_sc0010281.1_g000001 Rmu_sc0010281.1_g000002 Rmu_sc0010714.1_g000011 Rmu_sc0010714.1_g000016 Rmu_sc0011169.1_g000001 Rmu_sc0011169.1_g000007 Rmu_sc0013603.1_g000006 Rmu_sc0020478.1_g000003 Rmu_sc0020478.1_g000007 Rmu_sc0025106.1_g000012 Rmu_sc0032709.1_g000001 Rmu_sc0033028.1_g000001
rosa_roxburghii Rroxscaffold_1G00069570 Rroxscaffold_1G00069610 Rroxscaffold_1G00069620 Rroxscaffold_1G00070480 Rroxscaffold_1G00070490 Rroxscaffold_1G00070500 Rroxscaffold_1G00070510 Rroxscaffold_1G00070520 Rroxscaffold_1G00070530 Rroxscaffold_1G00070540 Rroxscaffold_1G00070550 Rroxscaffold_1G00070590 Rroxscaffold_1G00072950 Rroxscaffold_1G00073080 Rroxscaffold_2G00111810 Rroxscaffold_2G00111820 Rroxscaffold_2G00113530 Rroxscaffold_2G00113870 Rroxscaffold_6G00405010 Rroxscaffold_6G00405020 Rroxscaffold_6G00423590 Rroxscaffold_6G00424100
rosa_rugosa Rorug02G0293200 Rorug02G0293300 Rorug02G0293400 Rorug02G0305900 Rorug02G0305900 Rorug03G0009100 Rorug03G0157000 Rorug03G0157000 Rorug03G0304900 Rorug04G0400500 Rorug04G0415200 Rorug04G0415300 Rorug04G0415400 Rorug04G0415500 Rorug04G0421100 Rorug05G0068000 Rorug05G0068100 Rorug05G0068200 Rorug05G0068500 Rorug05G0224600 Rorug05G0224700
rosa_samantha Rh2CG331700 Rh2CG341600 Rh2CG341700 Rh2DG381200 Rh3DG071200 Rh3DG233400 Rh3DG233500 Rh3DG233600 Rh5AG043100 Rh5CG026000 Rh5CG047700 Rh5CG047800 Rh5CG047900 Rh5CG048000 Rh5CG048100 Rh5CG048300 Rh5CG056500 Rh5CG340500 Rh5CG340700 Rh5CG340800 Rh7AG365000
rosa_wichuraiana Rw0G002360 Rw0G002370 Rw0G012520 Rw0G018230 Rw0G019190 Rw2G027480 Rw2G029150 Rw3G005520 Rw3G005880 Rw3G005890 Rw3G018840 Rw3G018850 Rw3G018870 Rw3G018880 Rw3G020740 Rw5G002190 Rw5G004180 Rw5G004190 Rw5G004890 Rw5G013960 Rw5G014000 Rw5G028610 Rw7G030910 Rw7G030920

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 36, 1257
AccB1I GGYRCC 1 cut(s) 584
AccB7I CCANNNNNTGG 1 cut(s) 1678
AccI GTMKAC 2 cut(s) 62, 354
AciI CCGC 1 cut(s) 1130
AclWI GGATC 5 cut(s) 314, 764, 1593, 1787, 2090
AcoI YGGCCR 1 cut(s) 1231
AcsI RAATTY 2 cut(s) 1331, 1632
AcuI CTGAAG 5 cut(s) 479, 997, 1296, 1349, 2053
AfaI GTAC 2 cut(s) 1041, 1715
AfiI CCNNNNNNNGG 5 cut(s) 295, 296, 529, 729, 1678
AflII CTTAAG 1 cut(s) 1094
AflIII ACRYGT 3 cut(s) 924, 1716, 1858
AgsI TTSAA 8 cut(s) 235, 465, 841, 1336, 1514, 1664, 1952, 1984
AjnI CCWGG 4 cut(s) 214, 289, 640, 1677
AjuI GAANNNNNNNTTGG 2 cut(s) 1436, 1468
AloI GAACNNNNNNTCC 2 cut(s) 123, 155
AluBI AGCT 7 cut(s) 23, 118, 168, 986, 1452, 1927, 2156
AluI AGCT 7 cut(s) 23, 118, 168, 986, 1452, 1927, 2156
Alw26I GTCTC 2 cut(s) 1110, 1147
AlwI GGATC 5 cut(s) 314, 764, 1593, 1787, 2090
AoxI GGCC 5 cut(s) 392, 398, 602, 990, 1231
ApeKI GCWGC 3 cut(s) 1196, 1395, 2053
ApoI RAATTY 2 cut(s) 1331, 1632
AseI ATTAAT 1 cut(s) 615
Asp700I GAANNNNTTC 1 cut(s) 2077
AspS9I GGNCC 5 cut(s) 82, 392, 1027, 1669, 1987
AsuC2I CCSGG 3 cut(s) 149, 487, 1596
AsuHPI GGTGA 2 cut(s) 1713, 2039
AvaII GGWCC 4 cut(s) 82, 1027, 1669, 1987
BaeI ACNNNNGTAYC 2 cut(s) 54, 87
BalI TGGCCA 1 cut(s) 1233
BanI GGYRCC 1 cut(s) 584
BauI CACGAG 1 cut(s) 1533
BbsI GAAGAC 4 cut(s) 537, 1115, 1887, 2059
BbvCI CCTCAGC 1 cut(s) 987
BbvI GCAGC 3 cut(s) 1208, 1382, 2065
BccI CCATC 6 cut(s) 146, 531, 659, 677, 913, 2050
BceAI ACGGC 1 cut(s) 1991
BciT130I CCWGG 4 cut(s) 216, 291, 642, 1679
BcnI CCSGG 3 cut(s) 149, 487, 1596
BcoDI GTCTC 2 cut(s) 1110, 1147
BfaI CTAG 5 cut(s) 251, 1305, 1610, 1913, 2124
BfmI CTRYAG 2 cut(s) 198, 660
BfrI CTTAAG 1 cut(s) 1094
BglII AGATCT 1 cut(s) 952
BisI GCNGC 3 cut(s) 1197, 1396, 2054
BlsI GCNGC 3 cut(s) 1198, 1397, 2055
BmcAI AGTACT 1 cut(s) 1041
Bme1390I CCNGG 7 cut(s) 149, 216, 291, 487, 642, 1596, 1679
Bme18I GGWCC 4 cut(s) 82, 1027, 1669, 1987
BmgT120I GGNCC 5 cut(s) 82, 392, 1027, 1669, 1987
BmiI GGNNCC 2 cut(s) 586, 1670
BmrFI CCNGG 7 cut(s) 149, 216, 291, 487, 642, 1596, 1679
BmsI GCATC 7 cut(s) 376, 505, 1117, 1207, 1603, 1821, 1934
BpiI GAAGAC 4 cut(s) 537, 1115, 1887, 2059
Bpu10I CCTNAGC 2 cut(s) 987, 2049
BpuEI CTTGAG 3 cut(s) 1160, 1546, 1960
BpuMI CCSGG 3 cut(s) 149, 487, 1596
BsaBI GATNNNNATC 1 cut(s) 324
BsaJI CCNNGG 6 cut(s) 214, 289, 290, 395, 641, 1234
BsaWI WCCGGW 1 cut(s) 1723
Bsc4I CCNNNNNNNGG 5 cut(s) 295, 296, 529, 729, 1678
Bse1I ACTGG 5 cut(s) 133, 572, 882, 891, 1037
Bse3DI GCAATG 1 cut(s) 460
Bse8I GATNNNNATC 1 cut(s) 324
BseBI CCWGG 4 cut(s) 216, 291, 642, 1679
BseDI CCNNGG 6 cut(s) 214, 289, 290, 395, 641, 1234
BseGI GGATG 6 cut(s) 157, 391, 480, 701, 1132, 1768
BseJI GATNNNNATC 1 cut(s) 324
BseLI CCNNNNNNNGG 5 cut(s) 295, 296, 529, 729, 1678
BseMI GCAATG 1 cut(s) 460
BseMII CTCAG 2 cut(s) 978, 1818
BseNI ACTGG 5 cut(s) 133, 572, 882, 891, 1037
BseXI GCAGC 3 cut(s) 1208, 1382, 2065
BshFI GGCC 5 cut(s) 394, 400, 604, 992, 1233
BshNI GGYRCC 1 cut(s) 584
BsiSI CCGG 4 cut(s) 148, 486, 1596, 1724
BslFI GGGAC 3 cut(s) 314, 1571, 1682
BslI CCNNNNNNNGG 5 cut(s) 295, 296, 529, 729, 1678
BsmAI GTCTC 2 cut(s) 1110, 1147
BsmFI GGGAC 3 cut(s) 314, 1571, 1682
BsmI GAATGC 2 cut(s) 48, 1947
BsnI GGCC 5 cut(s) 394, 400, 604, 992, 1233
Bsp143I GATC 7 cut(s) 319, 769, 952, 1177, 1585, 1779, 2095
Bsp19I CCATGG 1 cut(s) 395
BspACI CCGC 1 cut(s) 1130
BspANI GGCC 5 cut(s) 394, 400, 604, 992, 1233
BspCNI CTCAG 2 cut(s) 979, 1819
BspLI GGNNCC 2 cut(s) 586, 1670
BspPI GGATC 5 cut(s) 314, 764, 1593, 1787, 2090
BspT107I GGYRCC 1 cut(s) 584
BspTI CTTAAG 1 cut(s) 1094
BsrDI GCAATG 1 cut(s) 460
BsrI ACTGG 5 cut(s) 133, 572, 882, 891, 1037
BssECI CCNNGG 6 cut(s) 214, 289, 290, 395, 641, 1234
BssMI GATC 7 cut(s) 319, 769, 952, 1177, 1585, 1779, 2095
BssSI CACGAG 1 cut(s) 1533
BssT1I CCWWGG 2 cut(s) 395, 1234
Bst2BI CACGAG 1 cut(s) 1533
Bst2UI CCWGG 4 cut(s) 216, 291, 642, 1679
Bst4CI ACNGT 1 cut(s) 78
Bst6I CTCTTC 1 cut(s) 2043
BstAFI CTTAAG 1 cut(s) 1094
BstC8I GCNNGC 2 cut(s) 1970, 2058
BstDEI CTNAG 6 cut(s) 136, 369, 987, 1149, 1827, 2049
BstDSI CCRYGG 1 cut(s) 395
BstF5I GGATG 6 cut(s) 157, 391, 480, 701, 1132, 1768
BstKTI GATC 7 cut(s) 322, 772, 955, 1180, 1588, 1782, 2098
BstMAI GTCTC 2 cut(s) 1110, 1147
BstMBI GATC 7 cut(s) 319, 769, 952, 1177, 1585, 1779, 2095
BstMWI GCNNNNNNNGC 4 cut(s) 29, 1055, 1355, 2003
BstNI CCWGG 4 cut(s) 216, 291, 642, 1679
BstNSI RCATGY 4 cut(s) 928, 1441, 1720, 1862
BstSCI CCNGG 7 cut(s) 147, 214, 289, 485, 640, 1594, 1677
BstSFI CTRYAG 2 cut(s) 198, 660
BstV1I GCAGC 3 cut(s) 1208, 1382, 2065
BstV2I GAAGAC 4 cut(s) 537, 1115, 1887, 2059
BstX2I RGATCY 3 cut(s) 769, 952, 1585
BstYI RGATCY 3 cut(s) 769, 952, 1585
BsuRI GGCC 5 cut(s) 394, 400, 604, 992, 1233
BtgI CCRYGG 1 cut(s) 395
BtsCI GGATG 6 cut(s) 157, 391, 480, 701, 1132, 1768
BtsI GCAGTG 1 cut(s) 1255
BtsIMutI CAGTG 4 cut(s) 533, 875, 1187, 1255
Cac8I GCNNGC 2 cut(s) 1970, 2058
Cfr13I GGNCC 5 cut(s) 82, 392, 1027, 1669, 1987
Csp6I GTAC 2 cut(s) 1040, 1714
CviQI GTAC 2 cut(s) 1040, 1714
DdeI CTNAG 6 cut(s) 136, 369, 987, 1149, 1827, 2049
DpnI GATC 7 cut(s) 321, 771, 954, 1179, 1587, 1781, 2097
DpnII GATC 7 cut(s) 319, 769, 952, 1177, 1585, 1779, 2095
EaeI YGGCCR 1 cut(s) 1231
Eam1104I CTCTTC 1 cut(s) 2043
EarI CTCTTC 1 cut(s) 2043
Eco130I CCWWGG 2 cut(s) 395, 1234
Eco147I AGGCCT 1 cut(s) 604
Eco47I GGWCC 4 cut(s) 82, 1027, 1669, 1987
Eco57I CTGAAG 5 cut(s) 479, 997, 1296, 1349, 2053
EcoO109I RGGNCCY 1 cut(s) 1027
EcoRI GAATTC 1 cut(s) 1331
EcoRII CCWGG 4 cut(s) 214, 289, 640, 1677
EcoT14I CCWWGG 2 cut(s) 395, 1234
EcoT22I ATGCAT 2 cut(s) 1836, 1949
ErhI CCWWGG 2 cut(s) 395, 1234
FalI AAGNNNNNCTT 2 cut(s) 1944, 1976
FaqI GGGAC 3 cut(s) 314, 1571, 1682
FauNDI CATATG 1 cut(s) 1708
FblI GTMKAC 2 cut(s) 62, 354
Fnu4HI GCNGC 3 cut(s) 1197, 1396, 2054
FokI GGATG 6 cut(s) 164, 398, 487, 708, 1139, 1775
Fsp4HI GCNGC 3 cut(s) 1197, 1396, 2054
FspBI CTAG 5 cut(s) 251, 1305, 1610, 1913, 2124
GluI GCNGC 3 cut(s) 1197, 1396, 2054
HaeIII GGCC 5 cut(s) 394, 400, 604, 992, 1233
HapII CCGG 4 cut(s) 148, 486, 1596, 1724
HindIII AAGCTT 2 cut(s) 166, 1450
HpaII CCGG 4 cut(s) 148, 486, 1596, 1724
HphI GGTGA 2 cut(s) 1713, 2039
Hpy166II GTNNAC 4 cut(s) 63, 355, 707, 934
Hpy188I TCNGA 9 cut(s) 324, 678, 947, 1216, 1639, 1703, 1762, 1828, 2072
Hpy8I GTNNAC 4 cut(s) 63, 355, 707, 934
Hpy99I CGWCG 1 cut(s) 2012
HpyAV CCTTC 7 cut(s) 289, 472, 734, 745, 1616, 1978, 2110
HpyCH4III ACNGT 1 cut(s) 78
HpyCH4V TGCA 9 cut(s) 389, 855, 1168, 1349, 1733, 1834, 1947, 1972, 2060
HpyF10VI GCNNNNNNNGC 4 cut(s) 29, 1055, 1355, 2003
HpyF3I CTNAG 6 cut(s) 136, 369, 987, 1149, 1827, 2049
Kzo9I GATC 7 cut(s) 319, 769, 952, 1177, 1585, 1779, 2095
Lsp1109I GCAGC 3 cut(s) 1208, 1382, 2065
LweI GCATC 7 cut(s) 376, 505, 1117, 1207, 1603, 1821, 1934
MaeI CTAG 5 cut(s) 251, 1305, 1610, 1913, 2124
MaeIII GTNAC 5 cut(s) 276, 489, 563, 1485, 1719
MalI GATC 7 cut(s) 321, 771, 954, 1179, 1587, 1781, 2097
MboI GATC 7 cut(s) 319, 769, 952, 1177, 1585, 1779, 2095
MflI RGATCY 3 cut(s) 769, 952, 1585
MlsI TGGCCA 1 cut(s) 1233
MluNI TGGCCA 1 cut(s) 1233
MlyI GAGTC 3 cut(s) 1451, 1553, 1896
MmeI TCCRAC 3 cut(s) 650, 925, 1681
MnlI CCTC 6 cut(s) 982, 1098, 1126, 1135, 1476, 1563
Mox20I TGGCCA 1 cut(s) 1233
Mph1103I ATGCAT 2 cut(s) 1836, 1949
MroXI GAANNNNTTC 1 cut(s) 2077
MscI TGGCCA 1 cut(s) 1233
MseI TTAA 5 cut(s) 263, 615, 1095, 1182, 1493
MslI CAYNNNNRTG 2 cut(s) 582, 1952
Msp20I TGGCCA 1 cut(s) 1233
MspCI CTTAAG 1 cut(s) 1094
MspI CCGG 4 cut(s) 148, 486, 1596, 1724
MspR9I CCNGG 7 cut(s) 149, 216, 291, 487, 642, 1596, 1679
Mva1269I GAATGC 2 cut(s) 48, 1947
MvaI CCWGG 4 cut(s) 216, 291, 642, 1679
MwoI GCNNNNNNNGC 4 cut(s) 29, 1055, 1355, 2003
NciI CCSGG 3 cut(s) 149, 487, 1596
NcoI CCATGG 1 cut(s) 395
NdeI CATATG 1 cut(s) 1708
NdeII GATC 7 cut(s) 319, 769, 952, 1177, 1585, 1779, 2095
NlaIV GGNNCC 2 cut(s) 586, 1670
NmeAIII GCCGAG 1 cut(s) 1642
NmuCI GTSAC 4 cut(s) 276, 563, 1485, 1719
NsiI ATGCAT 2 cut(s) 1836, 1949
NspI RCATGY 4 cut(s) 928, 1441, 1720, 1862
PasI CCCWGGG 1 cut(s) 290
PceI AGGCCT 1 cut(s) 604
PciI ACATGT 3 cut(s) 924, 1716, 1858
PctI GAATGC 2 cut(s) 48, 1947
PdmI GAANNNNTTC 1 cut(s) 2077
PfeI GAWTC 7 cut(s) 325, 482, 673, 1323, 1375, 1904, 2114
PflFI GACNNNGTC 1 cut(s) 1886
PflMI CCANNNNNTGG 1 cut(s) 1678
PfoI TCCNGGA 2 cut(s) 147, 1677
PkrI GCNGC 3 cut(s) 1198, 1397, 2055
PleI GAGTC 3 cut(s) 1451, 1553, 1895
PpsI GAGTC 3 cut(s) 1451, 1553, 1895
PpuMI RGGWCCY 1 cut(s) 1027
PscI ACATGT 3 cut(s) 924, 1716, 1858
PshBI ATTAAT 1 cut(s) 615
PsiI TTATAA 2 cut(s) 36, 1257
Psp5II RGGWCCY 1 cut(s) 1027
Psp6I CCWGG 4 cut(s) 214, 289, 640, 1677
PspGI CCWGG 4 cut(s) 214, 289, 640, 1677
PspN4I GGNNCC 2 cut(s) 586, 1670
PspPI GGNCC 5 cut(s) 82, 392, 1027, 1669, 1987
PspPPI RGGWCCY 1 cut(s) 1027
PsuI RGATCY 3 cut(s) 769, 952, 1585
PsyI GACNNNGTC 1 cut(s) 1886
RsaI GTAC 2 cut(s) 1041, 1715
RsaNI GTAC 2 cut(s) 1040, 1714
RseI CAYNNNNRTG 2 cut(s) 582, 1952
SaqAI TTAA 5 cut(s) 263, 615, 1095, 1182, 1493
SatI GCNGC 3 cut(s) 1197, 1396, 2054
Sau3AI GATC 7 cut(s) 319, 769, 952, 1177, 1585, 1779, 2095
Sau96I GGNCC 5 cut(s) 82, 392, 1027, 1669, 1987
ScaI AGTACT 1 cut(s) 1041
SchI GAGTC 3 cut(s) 1451, 1553, 1896
ScrFI CCNGG 7 cut(s) 149, 216, 291, 487, 642, 1596, 1679
SfaNI GCATC 7 cut(s) 376, 505, 1117, 1207, 1603, 1821, 1934
SfcI CTRYAG 2 cut(s) 198, 660
SinI GGWCC 4 cut(s) 82, 1027, 1669, 1987
SmiMI CAYNNNNRTG 2 cut(s) 582, 1952
SmlI CTYRAG 4 cut(s) 1094, 1139, 1561, 1939
SmoI CTYRAG 4 cut(s) 1094, 1139, 1561, 1939
SseBI AGGCCT 1 cut(s) 604
SsiI CCGC 1 cut(s) 1130
SspI AATATT 3 cut(s) 347, 613, 1659
SspMI CTAG 5 cut(s) 251, 1305, 1610, 1913, 2124
StuI AGGCCT 1 cut(s) 604
StyD4I CCNGG 7 cut(s) 147, 214, 289, 485, 640, 1594, 1677
StyI CCWWGG 2 cut(s) 395, 1234
TaaI ACNGT 1 cut(s) 78
TaqI TCGA 5 cut(s) 318, 782, 1176, 1326, 2158
TaqII GACCGA 2 cut(s) 70, 2004
TatI WGTACW 1 cut(s) 1039
TfiI GAWTC 7 cut(s) 325, 482, 673, 1323, 1375, 1904, 2114
Tru1I TTAA 5 cut(s) 263, 615, 1095, 1182, 1493
Tru9I TTAA 5 cut(s) 263, 615, 1095, 1182, 1493
TscAI CASTG 4 cut(s) 533, 882, 1194, 1255
TseFI GTSAC 4 cut(s) 276, 563, 1485, 1719
TseI GCWGC 3 cut(s) 1196, 1395, 2053
Tsp45I GTSAC 4 cut(s) 276, 563, 1485, 1719
TspDTI ATGAA 9 cut(s) 17, 236, 491, 1541, 1896, 1947, 2005, 2092, 2127
TspGWI ACGGA 1 cut(s) 708
TspRI CASTG 4 cut(s) 533, 882, 1194, 1255
Tth111I GACNNNGTC 1 cut(s) 1886
Van91I CCANNNNNTGG 1 cut(s) 1678
Vha464I CTTAAG 1 cut(s) 1094
VpaK11BI GGWCC 4 cut(s) 82, 1027, 1669, 1987
VspI ATTAAT 1 cut(s) 615
XapI RAATTY 2 cut(s) 1331, 1632
XbaI TCTAGA 3 cut(s) 250, 1304, 1609
XceI RCATGY 4 cut(s) 928, 1441, 1720, 1862
XcmI CCANNNNNNNNNTGG 1 cut(s) 1241
XmiI GTMKAC 2 cut(s) 62, 354
XmnI GAANNNNTTC 1 cut(s) 2077
XspI CTAG 5 cut(s) 251, 1305, 1610, 1913, 2124
ZrmI AGTACT 1 cut(s) 1041
Zsp2I ATGCAT 2 cut(s) 1836, 1949
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.