RLG00000031069

serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
OG0000112
Physical Location & Seq
Forward (+)
1734902 .. 1739429
4528 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000031069

Sequence Viewer

Length: 2043 bp
ATGCCACTGTTTCTTACCTACAAAGTTGCTAATGCCCGGAAAATGTTGGTCAAAGCTGTGCTTCTCTTCCTCCTCTTCCGATTTTGCGATTCCAGGGACACCTTAACATGGAACCAAGAACAACTGAAGGATGATGGTGGAGTTTTAGTCCCCGGAAATTCTAGCTACCGGTATATTGGAATTTGGCATTCTCAGACTAAAGTACCTGAAAAAACAGTGGTGTGGGTTGCAAACAGGAACAATCCCATCAATGATACCTCTGGTGTGCTCAAAATAAACAGGTATGGAGAACTGGCCCTTTATGCTTATAACATGAACAGCACTCCTGTTTGGTCTACCAATGTGTCACGGCCGGTCCAAAATAATAACGCAAGCGCTTTTTTTGCACAGCTTTTAGATGCAGGAAATTTAGTTGTGTTCCAGGATGATAATAATGAAATCCATGTATGGCAAAGTATGAAAGCCGGGGTGAATTGGAAAACTGGGCTAGAATGGGCTTTAACATCTTGGAAGTCACAAGATGACCCTGGACTTGGGGATTATACCTTTAGGCTTTATCCAGATCAGACTGCCGCCCCCCAATATTTTATGTATAAAGGTTTGAGCAAGTATTGGCGAAGTGAGTCAGGGCCAGACGGTCCTTCTGTCACTAATCAAGAGGAAACTTATTATTTCTTCAATTACACCAATGCAATTACAAGAACGAAGTTGACCGATTCTGGTAGGTTAGATCGCCTTACATGGGATAATGGTGGCCTTCAATGGAAGGAAGACTATTCTGCACTGAAGTCCCGGTGTGACTGGTATGGACGGTGTGGTGCCAACAGCAAATGTAAACCTGACAATATTAATGAGTTTGAGTGTGAATGTTTACCAGGGTATGAGCCTAGTTCTATAAATGATTGGAATCAGAAAAATGGGTCGGGTGGATGTGTGAGTAAGCGAGTTGGTGTATCAAAGTGTGGGAATGGAGATGGGTTTGTGAATGTGGCAAGAGTTAAATTTCCAGACACATCAATAGCATCACGGTTGAGAACAGGTATGAGTGCCAAAGAGTGTGAGCAGGACTGCTTAAGAAATTGTTCTTGCACCGCATATTTGAGCATCGAATATGAAGGGCTTGCGGATTGCTTGACATGGTATGATGACTTGATGGACATTTTAGTGTACACAGAGCGCGGACGAGATTTATACGGTCAGCTACCAAATGAACAGAAAGTTGCTGTGAAAAGATTGTCCAAAACTTCAGGACAAAGGATTGAAGAATTCAAAAATGAAGTTGCACTTATAGCAAGACTTCAACACAGGAATCTTGTGAAACTTTTAGGCTGTTGTATAAAGGGTGATGAAAGGATATTAGTCCTAGAATACATGCCTAACAAAAGCTTGGACTCCTTTCTTTTTGATAACACAAGACGGTCCTTCTTGGATTGGGAAAAGCGCTTTGAAATTATCAACAGGATTGCTCGAGGGATTCTATATCTTCACCAAGACTCAAGATTGAGGATTATCCATAGAGATCTAAAAACTAGCAATGTTCTAATAGATGCTGAGATGAACCCAAAAATTTCTGATTTTGGCATGGCTAGAATATTCCACGGGGACCAACTTACGCAGTATTTGGAAGATTTTCCACAAAATCTGATGTCTTTAGTTGGGATCATAATATTGGAGATTTTAAGTGGCCAGAAAAACAATGGTTTTGATCTAGAGGATCCTTCCATGAACTTAATAAGACGTGTTTGGGAGCTCTGGGAAGAAGGCAAAGCCTTAGATATTTTGGATTCGACACTAAAGTCATATCAGCCTAATGAAGTCATGAGATGCATACAAGTTGCGCTCTTGTGTGTACAAGAAGATTCGAAGGACCGACCTGCCATGTCAGCCATTGTTTTCATGTTGAGTGGTGAAGCATCTCCTCCATTGCTTAAGCAGCCGACATTTGTTTACAGAAGAAATTCTGGCACTGATGTTTATCCATTACTTTCAAACAGATCTTATTCTATAAACGATGTGACAGCATCTACAATGGGAGCTCGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
B_lectin DUF3403 PAN_2 Pkinase Pkinase_Tyr S_locus_glycop

Protein Analysis

681

Amino Acids

77.61

Weight (kDa)

6.4

Isoelectric Point (pI)

41.23

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 72 - 171 5.5e-20 D-mannose binding lectin
S_locus_glycop PF00954 217 - 297 1.3e-14 S-locus glycoprotein domain
PAN_2 PF08276 321 - 387 7.9e-18 PAN-like domain
PK_Tyr_Ser-Thr PF07714 403 - 536 5.5e-30 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 403 - 537 3.5e-28 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000112)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g03320 FvH4_3g03322 FvH4_3g03323 FvH4_3g03340 FvH4_3g03350 FvH4_3g03351 FvH4_3g03370 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g06140 FvH4_6g00257 FvH4_6g00257 FvH4_6g00270 FvH4_6g00300 FvH4_6g20800 FvH4_6g20800 FvH4_6g20800 FvH4_6g20800 FvH4_6g20800
malus_domestica MD05G1232700.v1.1 MD05G1327700.v1.1 MD05G1327800.v1.1 MD05G1327900.v1.1 MD05G1328000.v1.1 MD05G1328200.v1.1 MD05G1328300.v1.1 MD05G1328500.v1.1 MD05G1332000.v1.1 MD05G1332100.v1.1 MD10G1307600.v1.1 MD10G1307800.v1.1
prunus_persica Prupe.4G031900_v2.0.a1 Prupe.4G032000_v2.0.a1 Prupe.4G032000_v2.0.a1 Prupe.4G032100_v2.0.a1 Prupe.4G032200_v2.0.a1 Prupe.4G032200_v2.0.a1 Prupe.4G032200_v2.0.a1
pyrus_communis pycom05g30180 pycom05g30190 pycom05g30200 pycom05g30210 pycom10g25920 pycom10g25930
rosa_chinensis RchiOBHm_Chr2g0130831 RchiOBHm_Chr2g0132531 RchiOBHm_Chr2g0132541 RchiOBHm_Chr3g0455681 RchiOBHm_Chr3g0476681 RchiOBHm_Chr3g0476761 RchiOBHm_Chr3g0476771 RchiOBHm_Chr3g0476791 RchiOBHm_Chr3g0476801 RchiOBHm_Chr3g0476811 RchiOBHm_Chr4g0413551 RchiOBHm_Chr4g0413561 RchiOBHm_Chr5g0002911 RchiOBHm_Chr5g0005071 RchiOBHm_Chr5g0005101 RchiOBHm_Chr5g0005111 RchiOBHm_Chr5g0005121 RchiOBHm_Chr5g0005131 RchiOBHm_Chr5g0005141 RchiOBHm_Chr5g0005161 RchiOBHm_Chr5g0005171 RchiOBHm_Chr5g0006341 RchiOBHm_Chr5g0046161 RchiOBHm_Chr5g0046171 RchiOBHm_Chr5g0046181 RchiOBHm_Chr5g0046221 RchiOBHm_Chr5g0046231 RchiOBHm_Chr7g0224061 RchiOBHm_Chr7g0224081 RchiOBHm_Chr7g0224101 RchiOBHm_Chr7g0224111 RchiOBHm_Chr7g0224121
rosa_laevigata RLG00000010193 RLG00000019146 RLG00000019148 RLG00000019149 RLG00000019150 RLG00000023750 RLG00000023751 RLG00000023753 RLG00000029486 RLG00000031068 RLG00000031069 RLG00000031284 RLG00000031285 RLG00000031286 RLG00000031289 RLG00000031290 RLG00000031291 RLG00000031292 RLG00000031293 RLG00000031294 RLG00000031295 RLG00000031296 RLG00000031297 RLG00000031363 RLG00000032618 RLG00000032619
rosa_multiflora Rmu_co8147584.1_g000001 Rmu_co8205828.1_g000001 Rmu_co8373645.1_g000001 Rmu_co8407679.1_g000001 Rmu_co8452561.1_g000001 Rmu_sc0001035.1_g000076 Rmu_sc0001884.1_g000026 Rmu_sc0001884.1_g000027 Rmu_sc0001884.1_g000035 Rmu_sc0002157.1_g000026 Rmu_sc0002399.1_g000006 Rmu_sc0002399.1_g000007 Rmu_sc0002883.1_g000010 Rmu_sc0003629.1_g000014 Rmu_sc0003884.1_g000004 Rmu_sc0007865.1_g000005 Rmu_sc0008085.1_g000013 Rmu_sc0008085.1_g000014 Rmu_sc0008085.1_g000016 Rmu_sc0008085.1_g000018 Rmu_sc0008432.1_g000004 Rmu_sc0008714.1_g000002 Rmu_sc0009296.1_g000008 Rmu_sc0009296.1_g000009 Rmu_sc0009296.1_g000011 Rmu_sc0010281.1_g000001 Rmu_sc0010281.1_g000002 Rmu_sc0010714.1_g000011 Rmu_sc0010714.1_g000016 Rmu_sc0011169.1_g000001 Rmu_sc0011169.1_g000007 Rmu_sc0013603.1_g000006 Rmu_sc0020478.1_g000003 Rmu_sc0020478.1_g000007 Rmu_sc0025106.1_g000012 Rmu_sc0032709.1_g000001 Rmu_sc0033028.1_g000001
rosa_roxburghii Rroxscaffold_1G00069570 Rroxscaffold_1G00069610 Rroxscaffold_1G00069620 Rroxscaffold_1G00070480 Rroxscaffold_1G00070490 Rroxscaffold_1G00070500 Rroxscaffold_1G00070510 Rroxscaffold_1G00070520 Rroxscaffold_1G00070530 Rroxscaffold_1G00070540 Rroxscaffold_1G00070550 Rroxscaffold_1G00070590 Rroxscaffold_1G00072950 Rroxscaffold_1G00073080 Rroxscaffold_2G00111810 Rroxscaffold_2G00111820 Rroxscaffold_2G00113530 Rroxscaffold_2G00113870 Rroxscaffold_6G00405010 Rroxscaffold_6G00405020 Rroxscaffold_6G00423590 Rroxscaffold_6G00424100
rosa_rugosa Rorug02G0293200 Rorug02G0293300 Rorug02G0293400 Rorug02G0305900 Rorug02G0305900 Rorug03G0009100 Rorug03G0157000 Rorug03G0157000 Rorug03G0304900 Rorug04G0400500 Rorug04G0415200 Rorug04G0415300 Rorug04G0415400 Rorug04G0415500 Rorug04G0421100 Rorug05G0068000 Rorug05G0068100 Rorug05G0068200 Rorug05G0068500 Rorug05G0224600 Rorug05G0224700
rosa_samantha Rh2CG331700 Rh2CG341600 Rh2CG341700 Rh2DG381200 Rh3DG071200 Rh3DG233400 Rh3DG233500 Rh3DG233600 Rh5AG043100 Rh5CG026000 Rh5CG047700 Rh5CG047800 Rh5CG047900 Rh5CG048000 Rh5CG048100 Rh5CG048300 Rh5CG056500 Rh5CG340500 Rh5CG340700 Rh5CG340800 Rh7AG365000
rosa_wichuraiana Rw0G002360 Rw0G002370 Rw0G012520 Rw0G018230 Rw0G019190 Rw2G027480 Rw2G029150 Rw3G005520 Rw3G005880 Rw3G005890 Rw3G018840 Rw3G018850 Rw3G018870 Rw3G018880 Rw3G020740 Rw5G002190 Rw5G004180 Rw5G004190 Rw5G004890 Rw5G013960 Rw5G014000 Rw5G028610 Rw7G030910 Rw7G030920

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 309
AasI GACNNNNNNGTC 1 cut(s) 1795
Acc36I ACCTGC 1 cut(s) 1882
AccB1I GGYRCC 1 cut(s) 818
AccI GTMKAC 1 cut(s) 335
AccII CGCG 1 cut(s) 1179
AciI CCGC 4 cut(s) 573, 1092, 1124, 1179
AclWI GGATC 3 cut(s) 1667, 1709, 1722
AcoI YGGCCR 2 cut(s) 350, 1684
AcsI RAATTY 7 cut(s) 157, 180, 406, 1001, 1265, 1566, 1957
AcuI CTGAAG 3 cut(s) 146, 806, 1230
AfaI GTAC 3 cut(s) 204, 1169, 1851
AfeI AGCGCT 2 cut(s) 376, 1442
AfiI CCNNNNNNNGG 3 cut(s) 108, 533, 742
AflII CTTAAG 2 cut(s) 1072, 1928
AflIII ACRYGT 1 cut(s) 1738
AgeI ACCGGT 1 cut(s) 168
AgsI TTSAA 7 cut(s) 679, 761, 1262, 1270, 1301, 1448, 1989
AjiI CACGTC 1 cut(s) 1739
AjnI CCWGG 4 cut(s) 92, 420, 526, 874
AluBI AGCT 7 cut(s) 56, 165, 391, 1201, 1386, 1750, 2036
AluI AGCT 7 cut(s) 56, 165, 391, 1201, 1386, 1750, 2036
Alw21I GWGCWC 3 cut(s) 270, 1752, 2038
AlwI GGATC 3 cut(s) 1667, 1709, 1722
Ama87I CYCGRG 1 cut(s) 1467
Aor51HI AGCGCT 2 cut(s) 376, 1442
AoxI GGCC 5 cut(s) 294, 350, 629, 754, 1684
ApeKI GCWGC 1 cut(s) 1933
ApoI RAATTY 7 cut(s) 157, 180, 406, 1001, 1265, 1566, 1957
AseI ATTAAT 1 cut(s) 849
AsiGI ACCGGT 1 cut(s) 168
Asp700I GAANNNNTTC 3 cut(s) 1081, 1629, 1957
AspLEI GCGC 4 cut(s) 377, 1179, 1443, 1840
AspS9I GGNCC 7 cut(s) 295, 355, 629, 638, 1419, 1603, 1867
AsuC2I CCSGG 4 cut(s) 37, 153, 466, 793
AsuHPI GGTGA 4 cut(s) 481, 1355, 1478, 1919
AsuII TTCGAA 1 cut(s) 1862
AvaI CYCGRG 1 cut(s) 1467
AvaII GGWCC 5 cut(s) 355, 638, 1419, 1603, 1867
BaeI ACNNNNGTAYC 2 cut(s) 186, 219
BalI TGGCCA 1 cut(s) 1686
BamHI GGATCC 1 cut(s) 1714
BanI GGYRCC 1 cut(s) 818
BanII GRGCYC 2 cut(s) 1752, 2038
BbsI GAAGAC 1 cut(s) 777
Bbv12I GWGCWC 3 cut(s) 270, 1752, 2038
BbvI GCAGC 1 cut(s) 1945
BccI CCATC 4 cut(s) 128, 254, 968, 1147
BceAI ACGGC 1 cut(s) 365
BciT130I CCWGG 4 cut(s) 94, 422, 528, 876
BcnI CCSGG 4 cut(s) 37, 153, 466, 793
BfaI CTAG 7 cut(s) 162, 488, 888, 1364, 1530, 1587, 1709
BfoI RGCGCY 2 cut(s) 378, 1444
BfrI CTTAAG 2 cut(s) 1072, 1928
BfuAI ACCTGC 1 cut(s) 1882
BglII AGATCT 2 cut(s) 1519, 1994
BisI GCNGC 2 cut(s) 573, 1934
BlsI GCNGC 2 cut(s) 574, 1935
Bme1390I CCNGG 8 cut(s) 37, 94, 153, 422, 466, 528, 793, 876
Bme18I GGWCC 5 cut(s) 355, 638, 1419, 1603, 1867
BmeT110I CYCGRG 1 cut(s) 1467
BmgBI CACGTC 1 cut(s) 1739
BmgT120I GGNCC 7 cut(s) 295, 355, 629, 638, 1419, 1603, 1867
BmiI GGNNCC 4 cut(s) 113, 820, 1604, 1716
BmrFI CCNGG 8 cut(s) 37, 94, 153, 422, 466, 528, 793, 876
BmrI ACTGGG 1 cut(s) 492
BmsI GCATC 7 cut(s) 388, 1031, 1113, 1537, 1814, 1922, 2030
BmuI ACTGGG 1 cut(s) 492
BpiI GAAGAC 1 cut(s) 777
Bpu14I TTCGAA 1 cut(s) 1862
BpuEI CTTGAG 1 cut(s) 1480
BpuMI CCSGG 4 cut(s) 37, 153, 466, 793
BsaBI GATNNNNATC 2 cut(s) 906, 1974
BsaJI CCNNGG 6 cut(s) 93, 151, 465, 526, 875, 1597
BsaWI WCCGGW 1 cut(s) 168
BsaXI ACNNNNNCTCC 2 cut(s) 132, 162
Bsc4I CCNNNNNNNGG 3 cut(s) 108, 533, 742
Bse118I RCCGGY 2 cut(s) 168, 352
Bse1I ACTGG 3 cut(s) 297, 487, 806
Bse3DI GCAATG 2 cut(s) 1540, 1922
Bse8I GATNNNNATC 2 cut(s) 906, 1974
BseBI CCWGG 4 cut(s) 94, 422, 528, 876
BseDI CCNNGG 6 cut(s) 93, 151, 465, 526, 875, 1597
BseGI GGATG 3 cut(s) 136, 430, 935
BseJI GATNNNNATC 2 cut(s) 906, 1974
BseLI CCNNNNNNNGG 3 cut(s) 108, 533, 742
BseMI GCAATG 2 cut(s) 1540, 1922
BseMII CTCAG 2 cut(s) 206, 1542
BseNI ACTGG 3 cut(s) 297, 487, 806
BseRI GAGGAG 2 cut(s) 62, 1908
BseX3I CGGCCG 1 cut(s) 350
BseXI GCAGC 1 cut(s) 1945
BsgI GTGCAG 1 cut(s) 765
Bsh1236I CGCG 1 cut(s) 1179
Bsh1285I CGRYCG 1 cut(s) 353
BshFI GGCC 5 cut(s) 296, 352, 631, 756, 1686
BshNI GGYRCC 1 cut(s) 818
BshTI ACCGGT 1 cut(s) 168
BsiEI CGRYCG 1 cut(s) 353
BsiHKAI GWGCWC 3 cut(s) 270, 1752, 2038
BsiHKCI CYCGRG 1 cut(s) 1467
BsiSI CCGG 6 cut(s) 37, 153, 169, 353, 465, 793
BslFI GGGAC 4 cut(s) 110, 134, 775, 1616
BslI CCNNNNNNNGG 3 cut(s) 108, 533, 742
BsmFI GGGAC 4 cut(s) 110, 134, 775, 1616
BsmI GAATGC 1 cut(s) 187
BsnI GGCC 5 cut(s) 296, 352, 631, 756, 1686
BsoBI CYCGRG 1 cut(s) 1467
Bsp119I TTCGAA 1 cut(s) 1862
Bsp1286I GDGCHC 3 cut(s) 270, 1752, 2038
Bsp1407I TGTACA 2 cut(s) 1167, 1849
Bsp143I GATC 7 cut(s) 562, 730, 1519, 1659, 1705, 1714, 1994
BspACI CCGC 4 cut(s) 573, 1092, 1124, 1179
BspANI GGCC 5 cut(s) 296, 352, 631, 756, 1686
BspCNI CTCAG 2 cut(s) 205, 1543
BspFNI CGCG 1 cut(s) 1179
BspHI TCATGA 1 cut(s) 1818
BspLI GGNNCC 4 cut(s) 113, 820, 1604, 1716
BspMI ACCTGC 1 cut(s) 1882
BspPI GGATC 3 cut(s) 1667, 1709, 1722
BspT104I TTCGAA 1 cut(s) 1862
BspT107I GGYRCC 1 cut(s) 818
BspTI CTTAAG 2 cut(s) 1072, 1928
BsrDI GCAATG 2 cut(s) 1540, 1922
BsrFI RCCGGY 2 cut(s) 168, 352
BsrGI TGTACA 2 cut(s) 1167, 1849
BsrI ACTGG 3 cut(s) 297, 487, 806
BssAI RCCGGY 2 cut(s) 168, 352
BssECI CCNNGG 6 cut(s) 93, 151, 465, 526, 875, 1597
BssMI GATC 7 cut(s) 562, 730, 1519, 1659, 1705, 1714, 1994
Bst2UI CCWGG 4 cut(s) 94, 422, 528, 876
Bst4CI ACNGT 7 cut(s) 9, 217, 638, 813, 1029, 1196, 1419
Bst6I CTCTTC 2 cut(s) 71, 80
BstAFI CTTAAG 2 cut(s) 1072, 1928
BstAUI TGTACA 2 cut(s) 1167, 1849
BstBI TTCGAA 1 cut(s) 1862
BstC8I GCNNGC 2 cut(s) 373, 1122
BstDEI CTNAG 3 cut(s) 192, 1551, 1771
BstDSI CCRYGG 1 cut(s) 1597
BstF5I GGATG 3 cut(s) 136, 430, 935
BstFNI CGCG 1 cut(s) 1179
BstH2I RGCGCY 2 cut(s) 378, 1444
BstHHI GCGC 4 cut(s) 377, 1179, 1443, 1840
BstKTI GATC 7 cut(s) 565, 733, 1522, 1662, 1708, 1717, 1997
BstMBI GATC 7 cut(s) 562, 730, 1519, 1659, 1705, 1714, 1994
BstMCI CGRYCG 1 cut(s) 353
BstMWI GCNNNNNNNGC 5 cut(s) 302, 383, 1289, 1883, 1933
BstNI CCWGG 4 cut(s) 94, 422, 528, 876
BstNSI RCATGY 1 cut(s) 1375
BstSCI CCNGG 8 cut(s) 35, 92, 151, 420, 464, 526, 791, 874
BstUI CGCG 1 cut(s) 1179
BstV1I GCAGC 1 cut(s) 1945
BstV2I GAAGAC 1 cut(s) 777
BstX2I RGATCY 3 cut(s) 1519, 1714, 1994
BstYI RGATCY 3 cut(s) 1519, 1714, 1994
BstZI CGGCCG 1 cut(s) 350
BsuRI GGCC 5 cut(s) 296, 352, 631, 756, 1686
BtgI CCRYGG 1 cut(s) 1597
BtrI CACGTC 1 cut(s) 1739
BtsCI GGATG 3 cut(s) 136, 430, 935
BtsIMutI CAGTG 4 cut(s) 5, 222, 782, 1965
BveI ACCTGC 1 cut(s) 1882
Cac8I GCNNGC 2 cut(s) 373, 1122
CciI TCATGA 1 cut(s) 1818
CfoI GCGC 4 cut(s) 377, 1179, 1443, 1840
Cfr10I RCCGGY 2 cut(s) 168, 352
Cfr13I GGNCC 7 cut(s) 295, 355, 629, 638, 1419, 1603, 1867
Csp6I GTAC 3 cut(s) 203, 1168, 1850
CspAI ACCGGT 1 cut(s) 168
CviQI GTAC 3 cut(s) 203, 1168, 1850
DdeI CTNAG 3 cut(s) 192, 1551, 1771
DpnI GATC 7 cut(s) 564, 732, 1521, 1661, 1707, 1716, 1996
DpnII GATC 7 cut(s) 562, 730, 1519, 1659, 1705, 1714, 1994
DrdI GACNNNNNNGTC 1 cut(s) 1795
DseDI GACNNNNNNGTC 1 cut(s) 1795
EaeI YGGCCR 2 cut(s) 350, 1684
EagI CGGCCG 1 cut(s) 350
Eam1104I CTCTTC 2 cut(s) 71, 80
EarI CTCTTC 2 cut(s) 71, 80
Ecl136II GAGCTC 2 cut(s) 1750, 2036
EclXI CGGCCG 1 cut(s) 350
Eco24I GRGCYC 2 cut(s) 1752, 2038
Eco47I GGWCC 5 cut(s) 355, 638, 1419, 1603, 1867
Eco47III AGCGCT 2 cut(s) 376, 1442
Eco52I CGGCCG 1 cut(s) 350
Eco53kI GAGCTC 2 cut(s) 1750, 2036
Eco57I CTGAAG 3 cut(s) 146, 806, 1230
Eco88I CYCGRG 1 cut(s) 1467
EcoICRI GAGCTC 2 cut(s) 1750, 2036
EcoRI GAATTC 1 cut(s) 1265
EcoRII CCWGG 4 cut(s) 92, 420, 526, 874
EcoT22I ATGCAT 1 cut(s) 1829
EcoT38I GRGCYC 2 cut(s) 1752, 2038
FalI AAGNNNNNCTT 4 cut(s) 45, 77, 1269, 1301
FaqI GGGAC 4 cut(s) 110, 134, 775, 1616
FblI GTMKAC 1 cut(s) 335
Fnu4HI GCNGC 2 cut(s) 573, 1934
FokI GGATG 3 cut(s) 143, 437, 942
FriOI GRGCYC 2 cut(s) 1752, 2038
Fsp4HI GCNGC 2 cut(s) 573, 1934
FspBI CTAG 7 cut(s) 162, 488, 888, 1364, 1530, 1587, 1709
GlaI GCGC 4 cut(s) 376, 1178, 1442, 1839
GluI GCNGC 2 cut(s) 573, 1934
HaeII RGCGCY 2 cut(s) 378, 1444
HaeIII GGCC 5 cut(s) 296, 352, 631, 756, 1686
HapII CCGG 6 cut(s) 37, 153, 169, 353, 465, 793
HhaI GCGC 4 cut(s) 377, 1179, 1443, 1840
Hin6I GCGC 4 cut(s) 375, 1177, 1441, 1838
HinP1I GCGC 4 cut(s) 375, 1177, 1441, 1838
HincII GTYRAC 1 cut(s) 711
HindII GTYRAC 1 cut(s) 711
HindIII AAGCTT 1 cut(s) 1384
HpaII CCGG 6 cut(s) 37, 153, 169, 353, 465, 793
HphI GGTGA 4 cut(s) 481, 1355, 1478, 1919
Hpy166II GTNNAC 8 cut(s) 336, 711, 836, 872, 1168, 1170, 1850, 1948
Hpy188I TCNGA 6 cut(s) 80, 195, 567, 912, 1573, 1644
Hpy188III TCNNGA 7 cut(s) 560, 656, 1007, 1248, 1497, 1709, 1819
Hpy8I GTNNAC 8 cut(s) 336, 711, 836, 872, 1168, 1170, 1850, 1948
HpyAV CCTTC 9 cut(s) 121, 651, 760, 767, 1109, 1432, 1728, 1754, 1858
HpyCH4III ACNGT 7 cut(s) 9, 217, 638, 813, 1029, 1196, 1419
HpyCH4IV ACGT 1 cut(s) 1738
HpyCH4V TGCA 8 cut(s) 230, 386, 401, 692, 782, 1089, 1283, 1827
HpyF10VI GCNNNNNNNGC 5 cut(s) 302, 383, 1289, 1883, 1933
HpyF3I CTNAG 3 cut(s) 192, 1551, 1771
HpySE526I ACGT 1 cut(s) 1738
HspAI GCGC 4 cut(s) 375, 1177, 1441, 1838
Kzo9I GATC 7 cut(s) 562, 730, 1519, 1659, 1705, 1714, 1994
LmnI GCTCC 2 cut(s) 1747, 2033
Lsp1109I GCAGC 1 cut(s) 1945
LweI GCATC 7 cut(s) 388, 1031, 1113, 1537, 1814, 1922, 2030
MaeI CTAG 7 cut(s) 162, 488, 888, 1364, 1530, 1587, 1709
MaeII ACGT 1 cut(s) 1738
MaeIII GTNAC 5 cut(s) 345, 513, 646, 797, 2014
MalI GATC 7 cut(s) 564, 732, 1521, 1661, 1707, 1716, 1996
MboI GATC 7 cut(s) 562, 730, 1519, 1659, 1705, 1714, 1994
MflI RGATCY 3 cut(s) 1519, 1714, 1994
MhlI GDGCHC 3 cut(s) 270, 1752, 2038
MlsI TGGCCA 1 cut(s) 1686
MluNI TGGCCA 1 cut(s) 1686
MlyI GAGTC 3 cut(s) 632, 1385, 1487
MnlI CCTC 8 cut(s) 80, 83, 268, 652, 1463, 1497, 1705, 1929
Mox20I TGGCCA 1 cut(s) 1686
Mph1103I ATGCAT 1 cut(s) 1829
MroXI GAANNNNTTC 3 cut(s) 1081, 1629, 1957
MscI TGGCCA 1 cut(s) 1686
MseI TTAA 8 cut(s) 104, 500, 849, 999, 1073, 1679, 1730, 1929
MslI CAYNNNNRTG 1 cut(s) 1163
Msp20I TGGCCA 1 cut(s) 1686
MspCI CTTAAG 2 cut(s) 1072, 1928
MspI CCGG 6 cut(s) 37, 153, 169, 353, 465, 793
MspR9I CCNGG 8 cut(s) 37, 94, 153, 422, 466, 528, 793, 876
Mva1269I GAATGC 1 cut(s) 187
MvaI CCWGG 4 cut(s) 94, 422, 528, 876
MvnI CGCG 1 cut(s) 1179
MwoI GCNNNNNNNGC 5 cut(s) 302, 383, 1289, 1883, 1933
NciI CCSGG 4 cut(s) 37, 153, 466, 793
NdeII GATC 7 cut(s) 562, 730, 1519, 1659, 1705, 1714, 1994
NlaIV GGNNCC 4 cut(s) 113, 820, 1604, 1716
NmuCI GTSAC 5 cut(s) 345, 513, 646, 797, 2014
NsiI ATGCAT 1 cut(s) 1829
NspI RCATGY 1 cut(s) 1375
NspV TTCGAA 1 cut(s) 1862
PaeR7I CTCGAG 1 cut(s) 1467
PagI TCATGA 1 cut(s) 1818
PctI GAATGC 1 cut(s) 187
PdmI GAANNNNTTC 3 cut(s) 1081, 1629, 1957
PfeI GAWTC 7 cut(s) 89, 716, 907, 1309, 1474, 1784, 1859
PfoI TCCNGGA 1 cut(s) 420
PinAI ACCGGT 1 cut(s) 168
PkrI GCNGC 2 cut(s) 574, 1935
PleI GAGTC 3 cut(s) 631, 1385, 1487
PpsI GAGTC 3 cut(s) 631, 1385, 1487
PshBI ATTAAT 1 cut(s) 849
PsiI TTATAA 1 cut(s) 309
Psp124BI GAGCTC 2 cut(s) 1752, 2038
Psp6I CCWGG 4 cut(s) 92, 420, 526, 874
PspGI CCWGG 4 cut(s) 92, 420, 526, 874
PspN4I GGNNCC 4 cut(s) 113, 820, 1604, 1716
PspPI GGNCC 7 cut(s) 295, 355, 629, 638, 1419, 1603, 1867
PspXI VCTCGAGB 1 cut(s) 1467
PsuI RGATCY 3 cut(s) 1519, 1714, 1994
RsaI GTAC 3 cut(s) 204, 1169, 1851
RsaNI GTAC 3 cut(s) 203, 1168, 1850
RseI CAYNNNNRTG 1 cut(s) 1163
SacI GAGCTC 2 cut(s) 1752, 2038
SaqAI TTAA 8 cut(s) 104, 500, 849, 999, 1073, 1679, 1730, 1929
SatI GCNGC 2 cut(s) 573, 1934
Sau3AI GATC 7 cut(s) 562, 730, 1519, 1659, 1705, 1714, 1994
Sau96I GGNCC 7 cut(s) 295, 355, 629, 638, 1419, 1603, 1867
SchI GAGTC 3 cut(s) 632, 1385, 1487
ScrFI CCNGG 8 cut(s) 37, 94, 153, 422, 466, 528, 793, 876
SduI GDGCHC 3 cut(s) 270, 1752, 2038
SfaNI GCATC 7 cut(s) 388, 1031, 1113, 1537, 1814, 1922, 2030
Sfr274I CTCGAG 1 cut(s) 1467
SfuI TTCGAA 1 cut(s) 1862
SinI GGWCC 5 cut(s) 355, 638, 1419, 1603, 1867
SlaI CTCGAG 1 cut(s) 1467
SmiMI CAYNNNNRTG 1 cut(s) 1163
SmlI CTYRAG 4 cut(s) 1072, 1467, 1495, 1928
SmoI CTYRAG 4 cut(s) 1072, 1467, 1495, 1928
SsiI CCGC 4 cut(s) 573, 1092, 1124, 1179
SspI AATATT 4 cut(s) 584, 847, 1593, 1668
SspMI CTAG 7 cut(s) 162, 488, 888, 1364, 1530, 1587, 1709
SstI GAGCTC 2 cut(s) 1752, 2038
StyD4I CCNGG 8 cut(s) 35, 92, 151, 420, 464, 526, 791, 874
TaaI ACNGT 7 cut(s) 9, 217, 638, 813, 1029, 1196, 1419
TaiI ACGT 1 cut(s) 1741
TaqI TCGA 5 cut(s) 1107, 1468, 1787, 1862, 2038
TaqII GACCGA 2 cut(s) 728, 1884
TatI WGTACW 2 cut(s) 1167, 1849
TauI GCSGC 1 cut(s) 575
TfiI GAWTC 7 cut(s) 89, 716, 907, 1309, 1474, 1784, 1859
Tru1I TTAA 8 cut(s) 104, 500, 849, 999, 1073, 1679, 1730, 1929
Tru9I TTAA 8 cut(s) 104, 500, 849, 999, 1073, 1679, 1730, 1929
TscAI CASTG 4 cut(s) 12, 222, 789, 1972
TseFI GTSAC 5 cut(s) 345, 513, 646, 797, 2014
TseI GCWGC 1 cut(s) 1933
Tsp45I GTSAC 5 cut(s) 345, 513, 646, 797, 2014
TspRI CASTG 4 cut(s) 12, 222, 789, 1972
Vha464I CTTAAG 2 cut(s) 1072, 1928
VpaK11BI GGWCC 5 cut(s) 355, 638, 1419, 1603, 1867
VspI ATTAAT 1 cut(s) 849
XapI RAATTY 7 cut(s) 157, 180, 406, 1001, 1265, 1566, 1957
XbaI TCTAGA 1 cut(s) 1708
XceI RCATGY 1 cut(s) 1375
XcmI CCANNNNNNNNNTGG 1 cut(s) 1694
XhoI CTCGAG 1 cut(s) 1467
XmiI GTMKAC 1 cut(s) 335
XmnI GAANNNNTTC 3 cut(s) 1081, 1629, 1957
XspI CTAG 7 cut(s) 162, 488, 888, 1364, 1530, 1587, 1709
Zsp2I ATGCAT 1 cut(s) 1829
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.