Rmu_sc0001035.1_g000076

serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001035.1
OG0000112
Physical Location & Seq
Forward (+)
358598 .. 361842
3245 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001035.1_g000076.1.cds

Sequence Viewer

Length: 2478 bp
atgagaaaaaagatgccattggttcattcctacagaaatgaaaatgccgagaaaatggttttgaaagctctgcttctctttctcttctttcagttctgcacttccagggacaccatgagagggaacgaaggacaattgaaggatgctgatggtgactatttagtgtccaaagaaagcaagtttgaattgggtttcttcagccccggaaattctagctaccggtatgttggaatctggtattctcagactagagtacctaataaaacagtggtgtggattgcaaacaggaacaatcccatcaatgatacctctggtgtgctcacaatgaacaggtatggagaactagtcctttatgcttataacatggagagcagccctatatggtccacaaatgcgtcacggtcggttcaaaatgttaacacaagcactttatctgcacagcttttggatacaggaaatttagttgtgttccaggatgataaaaatgaaatctttatatggcaaagttttgattatcctatagatactttaattccaggtatgaaaattggggtgaattggaaaactgggcaagaatgggttttaacatcttggaagtcacaagatgaccctggaactggggactatacctataggctaagttcagatcataatgcatctccccaattttttttgtataaaggtttgagtaagtattggcgaagtgatccagggccagcgcctactttggtcgctaatcaagatgaaacttattatttcatgaatgaaaccaatgcaattgcaagaatagcagtgactgattctgccttagagcgccttacatgggatggtggtggccttcaatggaaggaagattactctgcaccgaagtcccgttgtgacaggtacggacagtgtggtgccaacagcagatgtagccctgataatgttaatctgtttgagtgtgactgtttgccagggtatgtgcctaattctataagtgattggaatcagaaaaatggttcaggtggatgtgtgagtaatcgacttggttcgttgaagtgtggagatggagacgggtttataaaggtggcaagagttaaatatccagacacatcgatagcagcatcattaaaatcaggtatgagtggcaaagagtgtgcgcaggagtgcctaagaaattgttcttgcactgcatatttgagcgatgaaaatgaagggattgttgattgcttgacatggtatgatgacttgatggacattttagtgtacacagagattggaagagatctctatgttcgtgtgaatgcaactgtcttaggaagatcacaaggtttgtgggaaaggaggggtatgctggctattccaatactgtgcagtgcgctagcattggtactaatcattatgcttgcatggaagtggcgtaagaagaacaggaacacaagaggcatagactttgtggaggcagaggagcttgaggaaactcagagacaccccgaattgcaatttttcgatcttgacacaataacagcagccacagaccacttctctcatgtcaatgaacttggccgcggtggctttggctctgtttatatgggtcaactatcaaatgaacagaaagttgctgtgaaaagattgtccaaaacttcaggacaagggattgaagaatttaagaatgaagttgcacttatagcaagacttcaacataggaaccttgtgaaacttttaggctgttgtataaagggagaagaaaggatgttagtcctagaatacatgcctaacaaaggcttggactcctttctttttgataagacaagacggtccttcttggattgggaaaagcgttttgaaattatcaacgggattgctcgtgggattctatatcttcaccaagactcaagattgaggattatccatagagatctaaaaactagtaatgttctactagatgatgagatgaacccaaaaatttctgattttggcatggctagaatattccatggagaccaactgcaagataagacaagccgaattgtcggaacatatggctacatgtcaccggagtacgcagtatttgggagattttccacaaagtctgatgtctttagttttgggatcataatgttggagattgtaagtggccagaaaaacaatggttctgatccggaggatccttccgtgaacttaataggacgtgtatgggagctctggagagaaggcagagccttggatattgtggattcaacactgaagtcatatcatccaaatgaagccatgagatgcatacaagttggtctcttgtgtgtacaagaagatccgatggaccgacctgtcatgtcagccattgttttcatgttgagtgatgaagcatctcctccattgccaaagcagccggcagttgtttacagaagaaatttcggcactgatgttgatccattactttcaaacagatttttttctagaaatgacttgacagtaactacaatggaagctcgataa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
B_lectin DUF3403 PAN_2 Pkinase Pkinase_Tyr S_locus_glycop

Protein Analysis

825

Amino Acids

93.51

Weight (kDa)

5.79

Isoelectric Point (pI)

36.67

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000112)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g03320 FvH4_3g03322 FvH4_3g03323 FvH4_3g03340 FvH4_3g03350 FvH4_3g03351 FvH4_3g03370 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g06140 FvH4_6g00257 FvH4_6g00257 FvH4_6g00270 FvH4_6g00300 FvH4_6g20800 FvH4_6g20800 FvH4_6g20800 FvH4_6g20800 FvH4_6g20800
malus_domestica MD05G1232700.v1.1 MD05G1327700.v1.1 MD05G1327800.v1.1 MD05G1327900.v1.1 MD05G1328000.v1.1 MD05G1328200.v1.1 MD05G1328300.v1.1 MD05G1328500.v1.1 MD05G1332000.v1.1 MD05G1332100.v1.1 MD10G1307600.v1.1 MD10G1307800.v1.1
prunus_persica Prupe.4G031900_v2.0.a1 Prupe.4G032000_v2.0.a1 Prupe.4G032000_v2.0.a1 Prupe.4G032100_v2.0.a1 Prupe.4G032200_v2.0.a1 Prupe.4G032200_v2.0.a1 Prupe.4G032200_v2.0.a1
pyrus_communis pycom05g30180 pycom05g30190 pycom05g30200 pycom05g30210 pycom10g25920 pycom10g25930
rosa_chinensis RchiOBHm_Chr2g0130831 RchiOBHm_Chr2g0132531 RchiOBHm_Chr2g0132541 RchiOBHm_Chr3g0455681 RchiOBHm_Chr3g0476681 RchiOBHm_Chr3g0476761 RchiOBHm_Chr3g0476771 RchiOBHm_Chr3g0476791 RchiOBHm_Chr3g0476801 RchiOBHm_Chr3g0476811 RchiOBHm_Chr4g0413551 RchiOBHm_Chr4g0413561 RchiOBHm_Chr5g0002911 RchiOBHm_Chr5g0005071 RchiOBHm_Chr5g0005101 RchiOBHm_Chr5g0005111 RchiOBHm_Chr5g0005121 RchiOBHm_Chr5g0005131 RchiOBHm_Chr5g0005141 RchiOBHm_Chr5g0005161 RchiOBHm_Chr5g0005171 RchiOBHm_Chr5g0006341 RchiOBHm_Chr5g0046161 RchiOBHm_Chr5g0046171 RchiOBHm_Chr5g0046181 RchiOBHm_Chr5g0046221 RchiOBHm_Chr5g0046231 RchiOBHm_Chr7g0224061 RchiOBHm_Chr7g0224081 RchiOBHm_Chr7g0224101 RchiOBHm_Chr7g0224111 RchiOBHm_Chr7g0224121
rosa_laevigata RLG00000010193 RLG00000019146 RLG00000019148 RLG00000019149 RLG00000019150 RLG00000023750 RLG00000023751 RLG00000023753 RLG00000029486 RLG00000031068 RLG00000031069 RLG00000031284 RLG00000031285 RLG00000031286 RLG00000031289 RLG00000031290 RLG00000031291 RLG00000031292 RLG00000031293 RLG00000031294 RLG00000031295 RLG00000031296 RLG00000031297 RLG00000031363 RLG00000032618 RLG00000032619
rosa_multiflora Rmu_co8147584.1_g000001 Rmu_co8205828.1_g000001 Rmu_co8373645.1_g000001 Rmu_co8407679.1_g000001 Rmu_co8452561.1_g000001 Rmu_sc0001035.1_g000076 Rmu_sc0001884.1_g000026 Rmu_sc0001884.1_g000027 Rmu_sc0001884.1_g000035 Rmu_sc0002157.1_g000026 Rmu_sc0002399.1_g000006 Rmu_sc0002399.1_g000007 Rmu_sc0002883.1_g000010 Rmu_sc0003629.1_g000014 Rmu_sc0003884.1_g000004 Rmu_sc0007865.1_g000005 Rmu_sc0008085.1_g000013 Rmu_sc0008085.1_g000014 Rmu_sc0008085.1_g000016 Rmu_sc0008085.1_g000018 Rmu_sc0008432.1_g000004 Rmu_sc0008714.1_g000002 Rmu_sc0009296.1_g000008 Rmu_sc0009296.1_g000009 Rmu_sc0009296.1_g000011 Rmu_sc0010281.1_g000001 Rmu_sc0010281.1_g000002 Rmu_sc0010714.1_g000011 Rmu_sc0010714.1_g000016 Rmu_sc0011169.1_g000001 Rmu_sc0011169.1_g000007 Rmu_sc0013603.1_g000006 Rmu_sc0020478.1_g000003 Rmu_sc0020478.1_g000007 Rmu_sc0025106.1_g000012 Rmu_sc0032709.1_g000001 Rmu_sc0033028.1_g000001
rosa_roxburghii Rroxscaffold_1G00069570 Rroxscaffold_1G00069610 Rroxscaffold_1G00069620 Rroxscaffold_1G00070480 Rroxscaffold_1G00070490 Rroxscaffold_1G00070500 Rroxscaffold_1G00070510 Rroxscaffold_1G00070520 Rroxscaffold_1G00070530 Rroxscaffold_1G00070540 Rroxscaffold_1G00070550 Rroxscaffold_1G00070590 Rroxscaffold_1G00072950 Rroxscaffold_1G00073080 Rroxscaffold_2G00111810 Rroxscaffold_2G00111820 Rroxscaffold_2G00113530 Rroxscaffold_2G00113870 Rroxscaffold_6G00405010 Rroxscaffold_6G00405020 Rroxscaffold_6G00423590 Rroxscaffold_6G00424100
rosa_rugosa Rorug02G0293200 Rorug02G0293300 Rorug02G0293400 Rorug02G0305900 Rorug02G0305900 Rorug03G0009100 Rorug03G0157000 Rorug03G0157000 Rorug03G0304900 Rorug04G0400500 Rorug04G0415200 Rorug04G0415300 Rorug04G0415400 Rorug04G0415500 Rorug04G0421100 Rorug05G0068000 Rorug05G0068100 Rorug05G0068200 Rorug05G0068500 Rorug05G0224600 Rorug05G0224700
rosa_samantha Rh2CG331700 Rh2CG341600 Rh2CG341700 Rh2DG381200 Rh3DG071200 Rh3DG233400 Rh3DG233500 Rh3DG233600 Rh5AG043100 Rh5CG026000 Rh5CG047700 Rh5CG047800 Rh5CG047900 Rh5CG048000 Rh5CG048100 Rh5CG048300 Rh5CG056500 Rh5CG340500 Rh5CG340700 Rh5CG340800 Rh7AG365000
rosa_wichuraiana Rw0G002360 Rw0G002370 Rw0G012520 Rw0G018230 Rw0G019190 Rw2G027480 Rw2G029150 Rw3G005520 Rw3G005880 Rw3G005890 Rw3G018840 Rw3G018850 Rw3G018870 Rw3G018880 Rw3G020740 Rw5G002190 Rw5G004180 Rw5G004190 Rw5G004890 Rw5G013960 Rw5G014000 Rw5G028610 Rw7G030910 Rw7G030920

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 360, 1064
AasI GACNNNNNNGTC 2 cut(s) 1798, 2309
Acc16I TGCGCA 1 cut(s) 1143
AccB1I GGYRCC 1 cut(s) 899
AccII CGCG 1 cut(s) 1551
AccIII TCCGGA 1 cut(s) 2143
AciI CCGC 2 cut(s) 1549, 1551
AclWI GGATC 7 cut(s) 701, 2102, 2135, 2144, 2157, 2288, 2405
AcoI YGGCCR 2 cut(s) 1546, 2119
AcsI RAATTY 5 cut(s) 208, 457, 1646, 1947, 2392
AcuI CTGAAG 3 cut(s) 181, 1611, 2249
AfaI GTAC 6 cut(s) 255, 887, 1250, 1374, 2045, 2286
AfiI CCNNNNNNNGG 4 cut(s) 120, 617, 823, 1763
AflIII ACRYGT 2 cut(s) 2031, 2173
AgeI ACCGGT 1 cut(s) 219
AhlI ACTAGT 2 cut(s) 343, 1910
AjiI CACGTC 1 cut(s) 2174
AjnI CCWGG 6 cut(s) 104, 471, 535, 610, 709, 955
AluBI AGCT 6 cut(s) 68, 216, 442, 1453, 2185, 2471
AluI AGCT 6 cut(s) 68, 216, 442, 1453, 2185, 2471
Alw21I GWGCWC 2 cut(s) 321, 2187
Alw26I GTCTC 4 cut(s) 1047, 1462, 1977, 2279
AlwI GGATC 7 cut(s) 701, 2102, 2135, 2144, 2157, 2288, 2405
AlwNI CAGNNNCTG 1 cut(s) 797
Aor13HI TCCGGA 1 cut(s) 2143
AoxI GGCC 4 cut(s) 713, 835, 1546, 2119
ApeKI GCWGC 4 cut(s) 372, 1103, 1511, 2368
ApoI RAATTY 5 cut(s) 208, 457, 1646, 1947, 2392
AsiGI ACCGGT 1 cut(s) 219
Asp700I GAANNNNTTC 1 cut(s) 1162
AspLEI GCGC 4 cut(s) 721, 816, 1144, 1363
AspS9I GGNCC 4 cut(s) 384, 713, 1800, 2302
AsuC2I CCSGG 1 cut(s) 204
AsuHPI GGTGA 4 cut(s) 164, 565, 1859, 2028
AsuNHI GCTAGC 1 cut(s) 1363
AvaII GGWCC 3 cut(s) 384, 1800, 2302
BaeI ACNNNNGTAYC 2 cut(s) 237, 270
BalI TGGCCA 1 cut(s) 2121
BamHI GGATCC 1 cut(s) 2149
BanI GGYRCC 1 cut(s) 899
BanII GRGCYC 1 cut(s) 2187
BarI GAAGNNNNNNTAC 2 cut(s) 839, 871
BauI CACGAG 1 cut(s) 1848
Bbv12I GWGCWC 2 cut(s) 321, 2187
BbvI GCAGC 4 cut(s) 384, 1115, 1523, 2380
BccI CCATC 6 cut(s) 143, 305, 821, 1043, 1228, 2293
BciT130I CCWGG 6 cut(s) 106, 473, 537, 612, 711, 957
BciVI GTATCC 1 cut(s) 442
BcnI CCSGG 1 cut(s) 204
BcoDI GTCTC 4 cut(s) 1047, 1462, 1977, 2279
BcuI ACTAGT 2 cut(s) 343, 1910
BfaI CTAG 9 cut(s) 213, 249, 344, 1364, 1745, 1911, 1925, 1968, 2439
BfmI CTRYAG 3 cut(s) 31, 519, 631
BfoI RGCGCY 2 cut(s) 722, 817
BfuI GTATCC 1 cut(s) 442
BglI GCCNNNNNGGC 1 cut(s) 1554
BglII AGATCT 2 cut(s) 1267, 1900
BisI GCNGC 5 cut(s) 373, 1104, 1512, 1549, 2369
BlsI GCNGC 5 cut(s) 374, 1105, 1513, 1550, 2370
Bme1390I CCNGG 7 cut(s) 106, 204, 473, 537, 612, 711, 957
Bme18I GGWCC 3 cut(s) 384, 1800, 2302
BmgBI CACGTC 1 cut(s) 2174
BmgT120I GGNCC 4 cut(s) 384, 713, 1800, 2302
BmiI GGNNCC 3 cut(s) 901, 1691, 2151
BmrFI CCNGG 7 cut(s) 106, 204, 473, 537, 612, 711, 957
BmrI ACTGGG 2 cut(s) 576, 627
BmsI GCATC 6 cut(s) 3, 133, 665, 1115, 2249, 2357
BmtI GCTAGC 1 cut(s) 1367
BmuI ACTGGG 2 cut(s) 576, 627
BpmI CTGGAG 1 cut(s) 2209
BpuEI CTTGAG 2 cut(s) 1475, 1861
BpuMI CCSGG 1 cut(s) 204
Bsa29I ATCGAT 1 cut(s) 1097
BsaBI GATNNNNATC 2 cut(s) 987, 2409
BsaI GGTCTC 2 cut(s) 1977, 2279
BsaJI CCNNGG 8 cut(s) 105, 202, 610, 710, 956, 1549, 1978, 2205
BsaWI WCCGGW 3 cut(s) 219, 2038, 2143
BsaXI ACNNNNNCTCC 2 cut(s) 330, 360
Bsc4I CCNNNNNNNGG 4 cut(s) 120, 617, 823, 1763
Bse118I RCCGGY 2 cut(s) 219, 2371
Bse1I ACTGG 2 cut(s) 571, 622
Bse3DI GCAATG 1 cut(s) 2357
Bse8I GATNNNNATC 2 cut(s) 987, 2409
BseAI TCCGGA 1 cut(s) 2143
BseBI CCWGG 6 cut(s) 106, 473, 537, 612, 711, 957
BseCI ATCGAT 1 cut(s) 1097
BseDI CCNNGG 8 cut(s) 105, 202, 610, 710, 956, 1549, 1978, 2205
BseGI GGATG 6 cut(s) 148, 481, 832, 1016, 1740, 2239
BseJI GATNNNNATC 2 cut(s) 987, 2409
BseLI CCNNNNNNNGG 4 cut(s) 120, 617, 823, 1763
BseMI GCAATG 1 cut(s) 2357
BseMII CTCAG 2 cut(s) 257, 1478
BseNI ACTGG 2 cut(s) 571, 622
BseRI GAGGAG 2 cut(s) 1463, 2343
BseXI GCAGC 4 cut(s) 384, 1115, 1523, 2380
BsgI GTGCAG 4 cut(s) 82, 420, 846, 1375
Bsh1236I CGCG 1 cut(s) 1551
Bsh1285I CGRYCG 1 cut(s) 404
BshFI GGCC 4 cut(s) 715, 837, 1548, 2121
BshNI GGYRCC 1 cut(s) 899
BshTI ACCGGT 1 cut(s) 219
BshVI ATCGAT 1 cut(s) 1097
BsiEI CGRYCG 1 cut(s) 404
BsiHKAI GWGCWC 2 cut(s) 321, 2187
BsiSI CCGG 5 cut(s) 204, 220, 2039, 2144, 2372
BslFI GGGAC 3 cut(s) 122, 635, 856
BslI CCNNNNNNNGG 4 cut(s) 120, 617, 823, 1763
BsmAI GTCTC 4 cut(s) 1047, 1462, 1977, 2279
BsmBI CGTCTC 1 cut(s) 1047
BsmFI GGGAC 3 cut(s) 122, 635, 856
BsmI GAATGC 1 cut(s) 1291
BsnI GGCC 4 cut(s) 715, 837, 1548, 2121
Bso31I GGTCTC 2 cut(s) 1977, 2279
Bsp1286I GDGCHC 2 cut(s) 321, 2187
Bsp13I TCCGGA 1 cut(s) 2143
Bsp1407I TGTACA 2 cut(s) 1248, 2284
Bsp19I CCATGG 1 cut(s) 1978
BspACI CCGC 2 cut(s) 1549, 1551
BspANI GGCC 4 cut(s) 715, 837, 1548, 2121
BspCNI CTCAG 2 cut(s) 256, 1477
BspDI ATCGAT 1 cut(s) 1097
BspEI TCCGGA 1 cut(s) 2143
BspFNI CGCG 1 cut(s) 1551
BspHI TCATGA 1 cut(s) 759
BspLI GGNNCC 3 cut(s) 901, 1691, 2151
BspOI GCTAGC 1 cut(s) 1367
BspPI GGATC 7 cut(s) 701, 2102, 2135, 2144, 2157, 2288, 2405
BspT107I GGYRCC 1 cut(s) 899
BspTNI GGTCTC 2 cut(s) 1977, 2279
BsrDI GCAATG 1 cut(s) 2357
BsrFI RCCGGY 2 cut(s) 219, 2371
BsrGI TGTACA 2 cut(s) 1248, 2284
BsrI ACTGG 2 cut(s) 571, 622
BssAI RCCGGY 2 cut(s) 219, 2371
BssECI CCNNGG 8 cut(s) 105, 202, 610, 710, 956, 1549, 1978, 2205
BssSI CACGAG 1 cut(s) 1848
BssT1I CCWWGG 2 cut(s) 1978, 2205
Bst2BI CACGAG 1 cut(s) 1848
Bst2UI CCWGG 6 cut(s) 106, 473, 537, 612, 711, 957
Bst4CI ACNGT 8 cut(s) 268, 402, 894, 950, 1294, 1353, 1800, 2455
Bst6I CTCTTC 2 cut(s) 89, 1258
BstAUI TGTACA 2 cut(s) 1248, 2284
BstC8I GCNNGC 5 cut(s) 717, 1338, 1365, 1389, 2373
BstDEI CTNAG 6 cut(s) 243, 638, 808, 1154, 1297, 1464
BstDSI CCRYGG 2 cut(s) 1549, 1978
BstENI CCTNNNNNAGG 1 cut(s) 1761
BstF5I GGATG 6 cut(s) 148, 481, 832, 1016, 1740, 2239
BstFNI CGCG 1 cut(s) 1551
BstH2I RGCGCY 2 cut(s) 722, 817
BstHHI GCGC 4 cut(s) 721, 816, 1144, 1363
BstMAI GTCTC 4 cut(s) 1047, 1462, 1977, 2279
BstMCI CGRYCG 1 cut(s) 404
BstMWI GCNNNNNNNGC 5 cut(s) 788, 915, 1554, 1670, 2368
BstNI CCWGG 6 cut(s) 106, 473, 537, 612, 711, 957
BstNSI RCATGY 2 cut(s) 1756, 2035
BstSCI CCNGG 7 cut(s) 104, 202, 471, 535, 610, 709, 955
BstSFI CTRYAG 3 cut(s) 31, 519, 631
BstUI CGCG 1 cut(s) 1551
BstV1I GCAGC 4 cut(s) 384, 1115, 1523, 2380
BstX2I RGATCY 4 cut(s) 1267, 1900, 2149, 2293
BstYI RGATCY 4 cut(s) 1267, 1900, 2149, 2293
Bsu15I ATCGAT 1 cut(s) 1097
BsuI GTATCC 1 cut(s) 442
BsuRI GGCC 4 cut(s) 715, 837, 1548, 2121
BsuTUI ATCGAT 1 cut(s) 1097
BtgI CCRYGG 2 cut(s) 1549, 1978
BtgZI GCGATG 1 cut(s) 1200
BtrI CACGTC 1 cut(s) 2174
BtsCI GGATG 6 cut(s) 148, 481, 832, 1016, 1740, 2239
BtsI GCAGTG 3 cut(s) 798, 1170, 1363
BtsIMutI CAGTG 7 cut(s) 273, 798, 899, 1170, 1363, 2225, 2400
Cac8I GCNNGC 5 cut(s) 717, 1338, 1365, 1389, 2373
CaiI CAGNNNCTG 1 cut(s) 797
CciI TCATGA 1 cut(s) 759
CfoI GCGC 4 cut(s) 721, 816, 1144, 1363
Cfr10I RCCGGY 2 cut(s) 219, 2371
Cfr13I GGNCC 4 cut(s) 384, 713, 1800, 2302
Cfr42I CCGCGG 1 cut(s) 1552
ClaI ATCGAT 1 cut(s) 1097
CseI GACGC 1 cut(s) 384
Csp6I GTAC 6 cut(s) 254, 886, 1249, 1373, 2044, 2285
CspAI ACCGGT 1 cut(s) 219
CspCI CAANNNNNGTGG 2 cut(s) 1298, 1333
CviQI GTAC 6 cut(s) 254, 886, 1249, 1373, 2044, 2285
DdeI CTNAG 6 cut(s) 243, 638, 808, 1154, 1297, 1464
DrdI GACNNNNNNGTC 2 cut(s) 1798, 2309
DseDI GACNNNNNNGTC 2 cut(s) 1798, 2309
EaeI YGGCCR 2 cut(s) 1546, 2119
Eam1104I CTCTTC 2 cut(s) 89, 1258
EarI CTCTTC 2 cut(s) 89, 1258
Ecl136II GAGCTC 1 cut(s) 2185
Eco130I CCWWGG 2 cut(s) 1978, 2205
Eco24I GRGCYC 1 cut(s) 2187
Eco31I GGTCTC 2 cut(s) 1977, 2279
Eco47I GGWCC 3 cut(s) 384, 1800, 2302
Eco53kI GAGCTC 1 cut(s) 2185
Eco57I CTGAAG 3 cut(s) 181, 1611, 2249
EcoICRI GAGCTC 1 cut(s) 2185
EcoNI CCTNNNNNAGG 1 cut(s) 1761
EcoRII CCWGG 6 cut(s) 104, 471, 535, 610, 709, 955
EcoT14I CCWWGG 2 cut(s) 1978, 2205
EcoT22I ATGCAT 2 cut(s) 658, 2264
EcoT38I GRGCYC 1 cut(s) 2187
ErhI CCWWGG 2 cut(s) 1978, 2205
Esp3I CGTCTC 1 cut(s) 1047
FalI AAGNNNNNCTT 4 cut(s) 57, 89, 1650, 1682
FaqI GGGAC 3 cut(s) 122, 635, 856
FauNDI CATATG 1 cut(s) 2023
Fnu4HI GCNGC 5 cut(s) 373, 1104, 1512, 1549, 2369
FokI GGATG 6 cut(s) 155, 488, 839, 1023, 1747, 2226
FriOI GRGCYC 1 cut(s) 2187
Fsp4HI GCNGC 5 cut(s) 373, 1104, 1512, 1549, 2369
FspBI CTAG 9 cut(s) 213, 249, 344, 1364, 1745, 1911, 1925, 1968, 2439
FspI TGCGCA 1 cut(s) 1143
GlaI GCGC 4 cut(s) 720, 815, 1143, 1362
GluI GCNGC 5 cut(s) 373, 1104, 1512, 1549, 2369
GsuI CTGGAG 1 cut(s) 2209
HaeII RGCGCY 2 cut(s) 722, 817
HaeIII GGCC 4 cut(s) 715, 837, 1548, 2121
HapII CCGG 5 cut(s) 204, 220, 2039, 2144, 2372
HgaI GACGC 1 cut(s) 384
HhaI GCGC 4 cut(s) 721, 816, 1144, 1363
Hin6I GCGC 4 cut(s) 719, 814, 1142, 1361
HinP1I GCGC 4 cut(s) 719, 814, 1142, 1361
HincII GTYRAC 2 cut(s) 418, 1580
HindII GTYRAC 2 cut(s) 418, 1580
HinfI GANTC 7 cut(s) 231, 800, 988, 1772, 1855, 1874, 2219
HpaI GTTAAC 1 cut(s) 418
HpaII CCGG 5 cut(s) 204, 220, 2039, 2144, 2372
HphI GGTGA 4 cut(s) 164, 565, 1859, 2028
Hpy166II GTNNAC 8 cut(s) 387, 418, 1249, 1251, 1580, 2161, 2285, 2383
Hpy188I TCNGA 9 cut(s) 246, 646, 993, 1467, 1954, 2018, 2077, 2140, 2298
Hpy188III TCNNGA 9 cut(s) 740, 760, 1088, 1496, 1629, 1878, 2144, 2188, 2439
Hpy8I GTNNAC 8 cut(s) 387, 418, 1249, 1251, 1580, 2161, 2285, 2383
HpyAV CCTTC 8 cut(s) 122, 133, 841, 848, 1190, 1813, 2163, 2189
HpyCH4III ACNGT 8 cut(s) 268, 402, 894, 950, 1294, 1353, 1800, 2455
HpyCH4IV ACGT 1 cut(s) 2173
HpyF10VI GCNNNNNNNGC 5 cut(s) 788, 915, 1554, 1670, 2368
HpyF3I CTNAG 6 cut(s) 243, 638, 808, 1154, 1297, 1464
HpySE526I ACGT 1 cut(s) 2173
HspAI GCGC 4 cut(s) 719, 814, 1142, 1361
Kpn2I TCCGGA 1 cut(s) 2143
KroI GCCGGC 1 cut(s) 2371
KroNI GCCGGC 1 cut(s) 2373
KspAI GTTAAC 1 cut(s) 418
KspI CCGCGG 1 cut(s) 1552
LmnI GCTCC 2 cut(s) 1450, 2182
Lsp1109I GCAGC 4 cut(s) 384, 1115, 1523, 2380
LweI GCATC 6 cut(s) 3, 133, 665, 1115, 2249, 2357
MaeI CTAG 9 cut(s) 213, 249, 344, 1364, 1745, 1911, 1925, 1968, 2439
MaeII ACGT 1 cut(s) 2173
MaeIII GTNAC 8 cut(s) 152, 396, 597, 793, 878, 944, 2034, 2455
MfeI CAATTG 2 cut(s) 134, 777
MflI RGATCY 4 cut(s) 1267, 1900, 2149, 2293
MhlI GDGCHC 2 cut(s) 321, 2187
MlsI TGGCCA 1 cut(s) 2121
MluNI TGGCCA 1 cut(s) 2121
MlyI GAGTC 2 cut(s) 1766, 1868
MmeI TCCRAC 3 cut(s) 208, 1996, 2085
Mox20I TGGCCA 1 cut(s) 2121
Mph1103I ATGCAT 2 cut(s) 658, 2264
MroI TCCGGA 1 cut(s) 2143
MroNI GCCGGC 1 cut(s) 2371
MroXI GAANNNNTTC 1 cut(s) 1162
MscI TGGCCA 1 cut(s) 2121
MseI TTAA 8 cut(s) 417, 530, 584, 930, 1080, 1112, 1650, 2165
MslI CAYNNNNRTG 4 cut(s) 1244, 1396, 1536, 2244
Msp20I TGGCCA 1 cut(s) 2121
MspA1I CMGCKG 1 cut(s) 1551
MspI CCGG 5 cut(s) 204, 220, 2039, 2144, 2372
MspR9I CCNGG 7 cut(s) 106, 204, 473, 537, 612, 711, 957
MunI CAATTG 2 cut(s) 134, 777
Mva1269I GAATGC 1 cut(s) 1291
MvaI CCWGG 6 cut(s) 106, 473, 537, 612, 711, 957
MvnI CGCG 1 cut(s) 1551
MwoI GCNNNNNNNGC 5 cut(s) 788, 915, 1554, 1670, 2368
NaeI GCCGGC 1 cut(s) 2373
NciI CCSGG 1 cut(s) 204
NcoI CCATGG 1 cut(s) 1978
NdeI CATATG 1 cut(s) 2023
NgoMIV GCCGGC 1 cut(s) 2371
NheI GCTAGC 1 cut(s) 1363
NlaIV GGNNCC 3 cut(s) 901, 1691, 2151
NmeAIII GCCGAG 1 cut(s) 73
NmuCI GTSAC 7 cut(s) 152, 396, 597, 793, 878, 944, 2034
NsbI TGCGCA 1 cut(s) 1143
NsiI ATGCAT 2 cut(s) 658, 2264
NspI RCATGY 2 cut(s) 1756, 2035
PagI TCATGA 1 cut(s) 759
PciI ACATGT 1 cut(s) 2031
PctI GAATGC 1 cut(s) 1291
PdiI GCCGGC 1 cut(s) 2373
PdmI GAANNNNTTC 1 cut(s) 1162
PfeI GAWTC 5 cut(s) 231, 800, 988, 1855, 2219
PfoI TCCNGGA 1 cut(s) 471
PinAI ACCGGT 1 cut(s) 219
PkrI GCNGC 5 cut(s) 374, 1105, 1513, 1550, 2370
PleI GAGTC 2 cut(s) 1766, 1868
PpsI GAGTC 2 cut(s) 1766, 1868
PscI ACATGT 1 cut(s) 2031
PsiI TTATAA 2 cut(s) 360, 1064
Psp124BI GAGCTC 1 cut(s) 2187
Psp6I CCWGG 6 cut(s) 104, 471, 535, 610, 709, 955
PspGI CCWGG 6 cut(s) 104, 471, 535, 610, 709, 955
PspN4I GGNNCC 3 cut(s) 901, 1691, 2151
PspPI GGNCC 4 cut(s) 384, 713, 1800, 2302
PstNI CAGNNNCTG 1 cut(s) 797
PsuI RGATCY 4 cut(s) 1267, 1900, 2149, 2293
RsaI GTAC 6 cut(s) 255, 887, 1250, 1374, 2045, 2286
RsaNI GTAC 6 cut(s) 254, 886, 1249, 1373, 2044, 2285
RseI CAYNNNNRTG 4 cut(s) 1244, 1396, 1536, 2244
SacI GAGCTC 1 cut(s) 2187
SacII CCGCGG 1 cut(s) 1552
SaqAI TTAA 8 cut(s) 417, 530, 584, 930, 1080, 1112, 1650, 2165
SatI GCNGC 5 cut(s) 373, 1104, 1512, 1549, 2369
Sau96I GGNCC 4 cut(s) 384, 713, 1800, 2302
SchI GAGTC 2 cut(s) 1766, 1868
ScrFI CCNGG 7 cut(s) 106, 204, 473, 537, 612, 711, 957
SduI GDGCHC 2 cut(s) 321, 2187
SfaNI GCATC 6 cut(s) 3, 133, 665, 1115, 2249, 2357
SfcI CTRYAG 3 cut(s) 31, 519, 631
Sfr303I CCGCGG 1 cut(s) 1552
SgrBI CCGCGG 1 cut(s) 1552
SinI GGWCC 3 cut(s) 384, 1800, 2302
SmiMI CAYNNNNRTG 4 cut(s) 1244, 1396, 1536, 2244
SmlI CTYRAG 2 cut(s) 1454, 1876
SmoI CTYRAG 2 cut(s) 1454, 1876
SpeI ACTAGT 2 cut(s) 343, 1910
SsiI CCGC 2 cut(s) 1549, 1551
SspI AATATT 1 cut(s) 1974
SspMI CTAG 9 cut(s) 213, 249, 344, 1364, 1745, 1911, 1925, 1968, 2439
SstI GAGCTC 1 cut(s) 2187
StyD4I CCNGG 7 cut(s) 104, 202, 471, 535, 610, 709, 955
StyI CCWWGG 2 cut(s) 1978, 2205
TaaI ACNGT 8 cut(s) 268, 402, 894, 950, 1294, 1353, 1800, 2455
TaiI ACGT 1 cut(s) 2176
TaqI TCGA 4 cut(s) 1024, 1097, 1491, 2473
TaqII GACCGA 1 cut(s) 2319
TatI WGTACW 2 cut(s) 1248, 2284
TauI GCSGC 1 cut(s) 1551
TfiI GAWTC 5 cut(s) 231, 800, 988, 1855, 2219
Tru1I TTAA 8 cut(s) 417, 530, 584, 930, 1080, 1112, 1650, 2165
Tru9I TTAA 8 cut(s) 417, 530, 584, 930, 1080, 1112, 1650, 2165
TscAI CASTG 7 cut(s) 273, 798, 899, 1177, 1363, 2232, 2407
TseFI GTSAC 7 cut(s) 152, 396, 597, 793, 878, 944, 2034
TseI GCWGC 4 cut(s) 372, 1103, 1511, 2368
Tsp45I GTSAC 7 cut(s) 152, 396, 597, 793, 878, 944, 2034
TspGWI ACGGA 2 cut(s) 903, 2146
TspRI CASTG 7 cut(s) 273, 798, 899, 1177, 1363, 2232, 2407
VpaK11BI GGWCC 3 cut(s) 384, 1800, 2302
XagI CCTNNNNNAGG 1 cut(s) 1761
XapI RAATTY 5 cut(s) 208, 457, 1646, 1947, 2392
XbaI TCTAGA 1 cut(s) 2438
XceI RCATGY 2 cut(s) 1756, 2035
XcmI CCANNNNNNNNNTGG 1 cut(s) 2129
XmnI GAANNNNTTC 1 cut(s) 1162
XspI CTAG 9 cut(s) 213, 249, 344, 1364, 1745, 1911, 1925, 1968, 2439
Zsp2I ATGCAT 2 cut(s) 658, 2264
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.