FvH4_3g03351

serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
Physical Location & Seq
Forward (+)
1821652 .. 1821882
231 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g03351.t1

Sequence Viewer

Length: 231 bp
ATGAGATGTATACAAGTTGCACTTTTGTGTGTACAACAAGATTCAAATGACCGACCTGATATGTCAGCCATTGTTTTCATGTTGAGTGGTGAAGCACCTCTTCCCGTTCCTAAGCAGCCAGCATTTGTTTACAGAAGAAACCCTGGCACCGATGTTGATCCATTACTTTCAAACAGTTCGTCTTCTAGCTTGACCATGGTGGACAATTCTGAAAATAAGTACTTGTTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

77

Amino Acids

8.41

Weight (kDa)

4.66

Isoelectric Point (pI)

53.31

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000112)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g03320 FvH4_3g03322 FvH4_3g03323 FvH4_3g03340 FvH4_3g03350 FvH4_3g03351 FvH4_3g03370 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g06140 FvH4_6g00257 FvH4_6g00257 FvH4_6g00270 FvH4_6g00300 FvH4_6g20800 FvH4_6g20800 FvH4_6g20800 FvH4_6g20800 FvH4_6g20800
malus_domestica MD05G1232700.v1.1 MD05G1327700.v1.1 MD05G1327800.v1.1 MD05G1327900.v1.1 MD05G1328000.v1.1 MD05G1328200.v1.1 MD05G1328300.v1.1 MD05G1328500.v1.1 MD05G1332000.v1.1 MD05G1332100.v1.1 MD10G1307600.v1.1 MD10G1307800.v1.1
prunus_persica Prupe.4G031900_v2.0.a1 Prupe.4G032000_v2.0.a1 Prupe.4G032000_v2.0.a1 Prupe.4G032100_v2.0.a1 Prupe.4G032200_v2.0.a1 Prupe.4G032200_v2.0.a1 Prupe.4G032200_v2.0.a1
pyrus_communis pycom05g30180 pycom05g30190 pycom05g30200 pycom05g30210 pycom10g25920 pycom10g25930
rosa_chinensis RchiOBHm_Chr2g0130831 RchiOBHm_Chr2g0132531 RchiOBHm_Chr2g0132541 RchiOBHm_Chr3g0455681 RchiOBHm_Chr3g0476681 RchiOBHm_Chr3g0476761 RchiOBHm_Chr3g0476771 RchiOBHm_Chr3g0476791 RchiOBHm_Chr3g0476801 RchiOBHm_Chr3g0476811 RchiOBHm_Chr4g0413551 RchiOBHm_Chr4g0413561 RchiOBHm_Chr5g0002911 RchiOBHm_Chr5g0005071 RchiOBHm_Chr5g0005101 RchiOBHm_Chr5g0005111 RchiOBHm_Chr5g0005121 RchiOBHm_Chr5g0005131 RchiOBHm_Chr5g0005141 RchiOBHm_Chr5g0005161 RchiOBHm_Chr5g0005171 RchiOBHm_Chr5g0006341 RchiOBHm_Chr5g0046161 RchiOBHm_Chr5g0046171 RchiOBHm_Chr5g0046181 RchiOBHm_Chr5g0046221 RchiOBHm_Chr5g0046231 RchiOBHm_Chr7g0224061 RchiOBHm_Chr7g0224081 RchiOBHm_Chr7g0224101 RchiOBHm_Chr7g0224111 RchiOBHm_Chr7g0224121
rosa_laevigata RLG00000010193 RLG00000019146 RLG00000019148 RLG00000019149 RLG00000019150 RLG00000023750 RLG00000023751 RLG00000023753 RLG00000029486 RLG00000031068 RLG00000031069 RLG00000031284 RLG00000031285 RLG00000031286 RLG00000031289 RLG00000031290 RLG00000031291 RLG00000031292 RLG00000031293 RLG00000031294 RLG00000031295 RLG00000031296 RLG00000031297 RLG00000031363 RLG00000032618 RLG00000032619
rosa_multiflora Rmu_co8147584.1_g000001 Rmu_co8205828.1_g000001 Rmu_co8373645.1_g000001 Rmu_co8407679.1_g000001 Rmu_co8452561.1_g000001 Rmu_sc0001035.1_g000076 Rmu_sc0001884.1_g000026 Rmu_sc0001884.1_g000027 Rmu_sc0001884.1_g000035 Rmu_sc0002157.1_g000026 Rmu_sc0002399.1_g000006 Rmu_sc0002399.1_g000007 Rmu_sc0002883.1_g000010 Rmu_sc0003629.1_g000014 Rmu_sc0003884.1_g000004 Rmu_sc0007865.1_g000005 Rmu_sc0008085.1_g000013 Rmu_sc0008085.1_g000014 Rmu_sc0008085.1_g000016 Rmu_sc0008085.1_g000018 Rmu_sc0008432.1_g000004 Rmu_sc0008714.1_g000002 Rmu_sc0009296.1_g000008 Rmu_sc0009296.1_g000009 Rmu_sc0009296.1_g000011 Rmu_sc0010281.1_g000001 Rmu_sc0010281.1_g000002 Rmu_sc0010714.1_g000011 Rmu_sc0010714.1_g000016 Rmu_sc0011169.1_g000001 Rmu_sc0011169.1_g000007 Rmu_sc0013603.1_g000006 Rmu_sc0020478.1_g000003 Rmu_sc0020478.1_g000007 Rmu_sc0025106.1_g000012 Rmu_sc0032709.1_g000001 Rmu_sc0033028.1_g000001
rosa_roxburghii Rroxscaffold_1G00069570 Rroxscaffold_1G00069610 Rroxscaffold_1G00069620 Rroxscaffold_1G00070480 Rroxscaffold_1G00070490 Rroxscaffold_1G00070500 Rroxscaffold_1G00070510 Rroxscaffold_1G00070520 Rroxscaffold_1G00070530 Rroxscaffold_1G00070540 Rroxscaffold_1G00070550 Rroxscaffold_1G00070590 Rroxscaffold_1G00072950 Rroxscaffold_1G00073080 Rroxscaffold_2G00111810 Rroxscaffold_2G00111820 Rroxscaffold_2G00113530 Rroxscaffold_2G00113870 Rroxscaffold_6G00405010 Rroxscaffold_6G00405020 Rroxscaffold_6G00423590 Rroxscaffold_6G00424100
rosa_rugosa Rorug02G0293200 Rorug02G0293300 Rorug02G0293400 Rorug02G0305900 Rorug02G0305900 Rorug03G0009100 Rorug03G0157000 Rorug03G0157000 Rorug03G0304900 Rorug04G0400500 Rorug04G0415200 Rorug04G0415300 Rorug04G0415400 Rorug04G0415500 Rorug04G0421100 Rorug05G0068000 Rorug05G0068100 Rorug05G0068200 Rorug05G0068500 Rorug05G0224600 Rorug05G0224700
rosa_samantha Rh2CG331700 Rh2CG341600 Rh2CG341700 Rh2DG381200 Rh3DG071200 Rh3DG233400 Rh3DG233500 Rh3DG233600 Rh5AG043100 Rh5CG026000 Rh5CG047700 Rh5CG047800 Rh5CG047900 Rh5CG048000 Rh5CG048100 Rh5CG048300 Rh5CG056500 Rh5CG340500 Rh5CG340700 Rh5CG340800 Rh7AG365000
rosa_wichuraiana Rw0G002360 Rw0G002370 Rw0G012520 Rw0G018230 Rw0G019190 Rw2G027480 Rw2G029150 Rw3G005520 Rw3G005880 Rw3G005890 Rw3G018840 Rw3G018850 Rw3G018870 Rw3G018880 Rw3G020740 Rw5G002190 Rw5G004180 Rw5G004190 Rw5G004890 Rw5G013960 Rw5G014000 Rw5G028610 Rw7G030910 Rw7G030920

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 146
AccI GTMKAC 1 cut(s) 10
AclWI GGATC 1 cut(s) 152
AfaI GTAC 2 cut(s) 33, 221
AgsI TTSAA 2 cut(s) 45, 171
AjnI CCWGG 1 cut(s) 142
AleI CACNNNNGTG 1 cut(s) 25
AluBI AGCT 1 cut(s) 189
AluI AGCT 1 cut(s) 189
AlwI GGATC 1 cut(s) 152
ApeKI GCWGC 1 cut(s) 115
ArsI GACNNNNNNTTYG 2 cut(s) 164, 196
AsuHPI GGTGA 1 cut(s) 101
BanI GGYRCC 1 cut(s) 146
BbsI GAAGAC 1 cut(s) 174
BbvI GCAGC 1 cut(s) 127
BciT130I CCWGG 1 cut(s) 144
BfaI CTAG 1 cut(s) 186
BisI GCNGC 1 cut(s) 116
BlsI GCNGC 1 cut(s) 117
BmcAI AGTACT 1 cut(s) 221
Bme1390I CCNGG 1 cut(s) 144
BmiI GGNNCC 1 cut(s) 148
BmrFI CCNGG 1 cut(s) 144
BpiI GAAGAC 1 cut(s) 174
Bpu10I CCTNAGC 1 cut(s) 111
BsaBI GATNNNNATC 1 cut(s) 156
BsaJI CCNNGG 2 cut(s) 142, 195
Bse8I GATNNNNATC 1 cut(s) 156
BseBI CCWGG 1 cut(s) 144
BseDI CCNNGG 2 cut(s) 142, 195
BseJI GATNNNNATC 1 cut(s) 156
BseXI GCAGC 1 cut(s) 127
BshNI GGYRCC 1 cut(s) 146
Bsp1407I TGTACA 1 cut(s) 31
Bsp143I GATC 1 cut(s) 157
Bsp19I CCATGG 1 cut(s) 195
BspLI GGNNCC 1 cut(s) 148
BspPI GGATC 1 cut(s) 152
BspT107I GGYRCC 1 cut(s) 146
BsrGI TGTACA 1 cut(s) 31
BssECI CCNNGG 2 cut(s) 142, 195
BssMI GATC 1 cut(s) 157
BssNAI GTATAC 1 cut(s) 11
BssT1I CCWWGG 1 cut(s) 195
Bst1107I GTATAC 1 cut(s) 11
Bst2UI CCWGG 1 cut(s) 144
Bst4CI ACNGT 1 cut(s) 176
Bst6I CTCTTC 1 cut(s) 105
BstAUI TGTACA 1 cut(s) 31
BstC8I GCNNGC 1 cut(s) 120
BstDEI CTNAG 1 cut(s) 111
BstDSI CCRYGG 1 cut(s) 195
BstKTI GATC 1 cut(s) 160
BstMBI GATC 1 cut(s) 157
BstNI CCWGG 1 cut(s) 144
BstSCI CCNGG 1 cut(s) 142
BstV1I GCAGC 1 cut(s) 127
BstV2I GAAGAC 1 cut(s) 174
BstZ17I GTATAC 1 cut(s) 11
BtgI CCRYGG 1 cut(s) 195
Cac8I GCNNGC 1 cut(s) 120
Csp6I GTAC 2 cut(s) 32, 220
CviAII CATG 2 cut(s) 79, 196
CviJI RGCY 3 cut(s) 68, 118, 189
CviKI_1 RGCY 3 cut(s) 68, 118, 189
CviQI GTAC 2 cut(s) 32, 220
DdeI CTNAG 1 cut(s) 111
DpnI GATC 1 cut(s) 159
DpnII GATC 1 cut(s) 157
Eam1104I CTCTTC 1 cut(s) 105
EarI CTCTTC 1 cut(s) 105
Eco130I CCWWGG 1 cut(s) 195
EcoRII CCWGG 1 cut(s) 142
EcoT14I CCWWGG 1 cut(s) 195
ErhI CCWWGG 1 cut(s) 195
FaeI CATG 2 cut(s) 82, 199
FaiI YATR 4 cut(s) 11, 62, 80, 197
FalI AAGNNNNNCTT 3 cut(s) 38, 84, 116
FatI CATG 2 cut(s) 78, 195
FblI GTMKAC 1 cut(s) 10
Fnu4HI GCNGC 1 cut(s) 116
Fsp4HI GCNGC 1 cut(s) 116
FspBI CTAG 1 cut(s) 186
GluI GCNGC 1 cut(s) 116
Hin1II CATG 2 cut(s) 82, 199
HinfI GANTC 1 cut(s) 41
HphI GGTGA 1 cut(s) 101
Hpy166II GTNNAC 4 cut(s) 11, 32, 130, 202
Hpy188I TCNGA 1 cut(s) 211
Hpy8I GTNNAC 4 cut(s) 11, 32, 130, 202
HpyCH4III ACNGT 1 cut(s) 176
HpyCH4V TGCA 1 cut(s) 20
HpyF3I CTNAG 1 cut(s) 111
Hsp92II CATG 2 cut(s) 82, 199
Kzo9I GATC 1 cut(s) 157
LpnPI CCDG 4 cut(s) 69, 129, 132, 156
Lsp1109I GCAGC 1 cut(s) 127
MaeI CTAG 1 cut(s) 186
MalI GATC 1 cut(s) 159
MboI GATC 1 cut(s) 157
MboII GAAGA 3 cut(s) 92, 147, 174
MluCI AATT 1 cut(s) 205
MnlI CCTC 1 cut(s) 108
MseI TTAA 1 cut(s) 229
MslI CAYNNNNRTG 1 cut(s) 25
MspR9I CCNGG 1 cut(s) 144
MvaI CCWGG 1 cut(s) 144
NcoI CCATGG 1 cut(s) 195
NdeII GATC 1 cut(s) 157
NlaIII CATG 2 cut(s) 82, 199
NlaIV GGNNCC 1 cut(s) 148
OliI CACNNNNGTG 1 cut(s) 25
PfeI GAWTC 1 cut(s) 41
PkrI GCNGC 1 cut(s) 117
Psp6I CCWGG 1 cut(s) 142
PspGI CCWGG 1 cut(s) 142
PspN4I GGNNCC 1 cut(s) 148
RsaI GTAC 2 cut(s) 33, 221
RsaNI GTAC 2 cut(s) 32, 220
RseI CAYNNNNRTG 1 cut(s) 25
SaqAI TTAA 1 cut(s) 229
SatI GCNGC 1 cut(s) 116
Sau3AI GATC 1 cut(s) 157
ScaI AGTACT 1 cut(s) 221
ScrFI CCNGG 1 cut(s) 144
SetI ASST 3 cut(s) 58, 100, 191
SmiMI CAYNNNNRTG 1 cut(s) 25
Sse9I AATT 1 cut(s) 205
SspMI CTAG 1 cut(s) 186
StyD4I CCNGG 1 cut(s) 142
StyI CCWWGG 1 cut(s) 195
TaaI ACNGT 1 cut(s) 176
TaqII GACCGA 1 cut(s) 66
TasI AATT 1 cut(s) 205
TatI WGTACW 2 cut(s) 31, 219
TfiI GAWTC 1 cut(s) 41
Tru1I TTAA 1 cut(s) 229
Tru9I TTAA 1 cut(s) 229
TseI GCWGC 1 cut(s) 115
TspDTI ATGAA 1 cut(s) 67
XmiI GTMKAC 1 cut(s) 10
XspI CTAG 1 cut(s) 186
ZrmI AGTACT 1 cut(s) 221
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.