Rmu_sc0002399.1_g000007

serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002399.1
OG0000112
Physical Location & Seq
Reverse (-)
24686 .. 27894
3209 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002399.1_g000007.1.cds

Sequence Viewer

Length: 2433 bp
atgttattgaaatctttgcttctcttcctcctcttccaattttgcacttgcagggacaccatcagatggaatgaacaacaactgaaggatgttgatggtgaagttttggtgtccaaagaaaacaactttgagttgggtttcttcagccccggcgattctagccaccggtacgttggtatttggtattctcaatctaaaatatctgcaaaaacagtggtgtggatcgcaaacagagacagccccgtcaatgatacctctggagttctcacaatgaacaggtatggagaattagctctttatgcttataacatggagaacattcctatatggtccacaaatgcgtcacagtcggtccaaaacacagacgccttatatagatatgtacagcttttagatactggaaacttggttgtgttccgggatggtagaaatggaagcttgattttgtggcaaagttttgattatcctacagatactctaatcccaggtatgaaatctgggttgaattggcaaaaagggctagattggcatttaacatcttggaagtcacaagatgaccctggaaagggggactatgcctttagggtcgatccgaatcacaatgctactccccaatattttgtctacaagggttacactaagtattggcgaatggatgcagggccatggcctaattttgtcagtaatgccaacgaaatgtataatactctgccttataacagcaatgctatttcaatagtaaggctgaaggattccgggttacttcagcacctaatatggaatgatgctgaccatcaatgggtggaaatgtggtcttcgccaaaatacccttgtgactggtatggacattgtggtgctaacagcaaatgtagccctgacaatatttattactttgagtgtgagtgtattccagggtatgagccaaaatctgtagatgggtggaatcagagaaatggaactgatggatgtgtgagtaatcgagtaagtgtgtcaaagtgtaggaatggagaagggtttgtgaaggtggcaagggtaaaagatccagacacatcgaatgtagcaaggttgagaacaagtatgagtgccaaacagtgtgagcaggagtgcttgaaaaattgttcttgcacggcttatatgagcattacactggaaagggtcgtcaattgcttgacatggtttgatgacttgatggacatgttagtttacacaaagctcggacgagatctatatgttcgtgtggataaaatctcattagctgaggccagaaactcacaaggtttcttcaggagtggcaaggtccttattccaatactaactgctttggtggcactactactaatcattatactttccttgtggttgcttaagaaaaagaggaagacaagagactatttggatgcggaggaacttgaggaaagtaagagacacccggaattgcaatttttcgatcttaacacactaattgcagccacagacaacttctctgatgccaataaacttggccaaggtggttttggcattgtttataagggtgagttaccaaacgaacaaatagttgctataaaaagattgtccagaacttcaggacagggaatcgaagaattcaaaaacgaagttgcactaatagccagacttcaacacaggaatcttgtgaaacttttaggctgctgtataaagggagaagaaaggatattggttctggaatacatgccgaacaaaagcttggactcctttctttttgataacacaaggaggtcactcttaaattgggaaaagcgttttgaaattatcaatggggttgctcgtggggttctatatcttcatcgggactcaagattgaggattatccacagggatctgaaaaccagtaatgtccttttagatgccgagttagacccaaaaatttctgatttcggcatggcaagaatatttcaaggggaccaactcctggaaaagacaaatagagttgtcggaacatatggctacatgtcaccagaatatgcagtatttgggagattttctacgaaatcggatgtgtttagttttgggatcatactattggagattgttagtggcaagagaaacaatggttcttatgagatgcattattccataaacttgataggacatgtatggcaactttgggtagaagacaaagtcttggaaattgtggattcatcactagagatttatcagcttgatgaagtcttgagatgcattcaagttgggcttttgtgcgtgcaagaagatttgaaggaccgaccagccatgtcagccgtcgtgttcatgttgagtggtgaaacatctcttccatctcctaagcagcctgcatttgttttcagaacctgttccagcattgttgatgatcccttcattccaaatgaatcatattctagtaatagtttgacaataactaacatggaagctcgataa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
B_lectin DUF3403 PAN_2 Pkinase Pkinase_Tyr S_locus_glycop

Protein Analysis

810

Amino Acids

92.57

Weight (kDa)

6.15

Isoelectric Point (pI)

38.51

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000112)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g03320 FvH4_3g03322 FvH4_3g03323 FvH4_3g03340 FvH4_3g03350 FvH4_3g03351 FvH4_3g03370 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g06140 FvH4_6g00257 FvH4_6g00257 FvH4_6g00270 FvH4_6g00300 FvH4_6g20800 FvH4_6g20800 FvH4_6g20800 FvH4_6g20800 FvH4_6g20800
malus_domestica MD05G1232700.v1.1 MD05G1327700.v1.1 MD05G1327800.v1.1 MD05G1327900.v1.1 MD05G1328000.v1.1 MD05G1328200.v1.1 MD05G1328300.v1.1 MD05G1328500.v1.1 MD05G1332000.v1.1 MD05G1332100.v1.1 MD10G1307600.v1.1 MD10G1307800.v1.1
prunus_persica Prupe.4G031900_v2.0.a1 Prupe.4G032000_v2.0.a1 Prupe.4G032000_v2.0.a1 Prupe.4G032100_v2.0.a1 Prupe.4G032200_v2.0.a1 Prupe.4G032200_v2.0.a1 Prupe.4G032200_v2.0.a1
pyrus_communis pycom05g30180 pycom05g30190 pycom05g30200 pycom05g30210 pycom10g25920 pycom10g25930
rosa_chinensis RchiOBHm_Chr2g0130831 RchiOBHm_Chr2g0132531 RchiOBHm_Chr2g0132541 RchiOBHm_Chr3g0455681 RchiOBHm_Chr3g0476681 RchiOBHm_Chr3g0476761 RchiOBHm_Chr3g0476771 RchiOBHm_Chr3g0476791 RchiOBHm_Chr3g0476801 RchiOBHm_Chr3g0476811 RchiOBHm_Chr4g0413551 RchiOBHm_Chr4g0413561 RchiOBHm_Chr5g0002911 RchiOBHm_Chr5g0005071 RchiOBHm_Chr5g0005101 RchiOBHm_Chr5g0005111 RchiOBHm_Chr5g0005121 RchiOBHm_Chr5g0005131 RchiOBHm_Chr5g0005141 RchiOBHm_Chr5g0005161 RchiOBHm_Chr5g0005171 RchiOBHm_Chr5g0006341 RchiOBHm_Chr5g0046161 RchiOBHm_Chr5g0046171 RchiOBHm_Chr5g0046181 RchiOBHm_Chr5g0046221 RchiOBHm_Chr5g0046231 RchiOBHm_Chr7g0224061 RchiOBHm_Chr7g0224081 RchiOBHm_Chr7g0224101 RchiOBHm_Chr7g0224111 RchiOBHm_Chr7g0224121
rosa_laevigata RLG00000010193 RLG00000019146 RLG00000019148 RLG00000019149 RLG00000019150 RLG00000023750 RLG00000023751 RLG00000023753 RLG00000029486 RLG00000031068 RLG00000031069 RLG00000031284 RLG00000031285 RLG00000031286 RLG00000031289 RLG00000031290 RLG00000031291 RLG00000031292 RLG00000031293 RLG00000031294 RLG00000031295 RLG00000031296 RLG00000031297 RLG00000031363 RLG00000032618 RLG00000032619
rosa_multiflora Rmu_co8147584.1_g000001 Rmu_co8205828.1_g000001 Rmu_co8373645.1_g000001 Rmu_co8407679.1_g000001 Rmu_co8452561.1_g000001 Rmu_sc0001035.1_g000076 Rmu_sc0001884.1_g000026 Rmu_sc0001884.1_g000027 Rmu_sc0001884.1_g000035 Rmu_sc0002157.1_g000026 Rmu_sc0002399.1_g000006 Rmu_sc0002399.1_g000007 Rmu_sc0002883.1_g000010 Rmu_sc0003629.1_g000014 Rmu_sc0003884.1_g000004 Rmu_sc0007865.1_g000005 Rmu_sc0008085.1_g000013 Rmu_sc0008085.1_g000014 Rmu_sc0008085.1_g000016 Rmu_sc0008085.1_g000018 Rmu_sc0008432.1_g000004 Rmu_sc0008714.1_g000002 Rmu_sc0009296.1_g000008 Rmu_sc0009296.1_g000009 Rmu_sc0009296.1_g000011 Rmu_sc0010281.1_g000001 Rmu_sc0010281.1_g000002 Rmu_sc0010714.1_g000011 Rmu_sc0010714.1_g000016 Rmu_sc0011169.1_g000001 Rmu_sc0011169.1_g000007 Rmu_sc0013603.1_g000006 Rmu_sc0020478.1_g000003 Rmu_sc0020478.1_g000007 Rmu_sc0025106.1_g000012 Rmu_sc0032709.1_g000001 Rmu_sc0033028.1_g000001
rosa_roxburghii Rroxscaffold_1G00069570 Rroxscaffold_1G00069610 Rroxscaffold_1G00069620 Rroxscaffold_1G00070480 Rroxscaffold_1G00070490 Rroxscaffold_1G00070500 Rroxscaffold_1G00070510 Rroxscaffold_1G00070520 Rroxscaffold_1G00070530 Rroxscaffold_1G00070540 Rroxscaffold_1G00070550 Rroxscaffold_1G00070590 Rroxscaffold_1G00072950 Rroxscaffold_1G00073080 Rroxscaffold_2G00111810 Rroxscaffold_2G00111820 Rroxscaffold_2G00113530 Rroxscaffold_2G00113870 Rroxscaffold_6G00405010 Rroxscaffold_6G00405020 Rroxscaffold_6G00423590 Rroxscaffold_6G00424100
rosa_rugosa Rorug02G0293200 Rorug02G0293300 Rorug02G0293400 Rorug02G0305900 Rorug02G0305900 Rorug03G0009100 Rorug03G0157000 Rorug03G0157000 Rorug03G0304900 Rorug04G0400500 Rorug04G0415200 Rorug04G0415300 Rorug04G0415400 Rorug04G0415500 Rorug04G0421100 Rorug05G0068000 Rorug05G0068100 Rorug05G0068200 Rorug05G0068500 Rorug05G0224600 Rorug05G0224700
rosa_samantha Rh2CG331700 Rh2CG341600 Rh2CG341700 Rh2DG381200 Rh3DG071200 Rh3DG233400 Rh3DG233500 Rh3DG233600 Rh5AG043100 Rh5CG026000 Rh5CG047700 Rh5CG047800 Rh5CG047900 Rh5CG048000 Rh5CG048100 Rh5CG048300 Rh5CG056500 Rh5CG340500 Rh5CG340700 Rh5CG340800 Rh7AG365000
rosa_wichuraiana Rw0G002360 Rw0G002370 Rw0G012520 Rw0G018230 Rw0G019190 Rw2G027480 Rw2G029150 Rw3G005520 Rw3G005880 Rw3G005890 Rw3G018840 Rw3G018850 Rw3G018870 Rw3G018880 Rw3G020740 Rw5G002190 Rw5G004180 Rw5G004190 Rw5G004890 Rw5G013960 Rw5G014000 Rw5G028610 Rw7G030910 Rw7G030920

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 3 cut(s) 306, 717, 1527
AasI GACNNNNNNGTC 1 cut(s) 242
AccB7I CCANNNNNTGG 2 cut(s) 66, 1948
AccI GTMKAC 1 cut(s) 624
AciI CCGC 1 cut(s) 1400
AclWI GGATC 6 cut(s) 230, 584, 1034, 1863, 2057, 2360
AcoI YGGCCR 1 cut(s) 1501
AcsI RAATTY 2 cut(s) 1601, 1902
AcuI CTGAAG 6 cut(s) 104, 127, 749, 767, 1267, 1566
AcyI GRCGYC 1 cut(s) 366
AfaI GTAC 2 cut(s) 170, 384
AfiI CCNNNNNNNGG 5 cut(s) 66, 565, 566, 799, 1948
AflII CTTAAG 1 cut(s) 1364
AflIII ACRYGT 3 cut(s) 1194, 1986, 2128
AgeI ACCGGT 1 cut(s) 165
AjnI CCWGG 4 cut(s) 484, 559, 910, 1947
AjuI GAANNNNNNNTTGG 2 cut(s) 1706, 1738
AluBI AGCT 8 cut(s) 293, 388, 438, 1213, 1256, 1722, 2197, 2426
AluI AGCT 8 cut(s) 293, 388, 438, 1213, 1256, 1722, 2197, 2426
Alw26I GTCTC 3 cut(s) 228, 1380, 1417
AlwI GGATC 6 cut(s) 230, 584, 1034, 1863, 2057, 2360
AlwNI CAGNNNCTG 1 cut(s) 2346
AoxI GGCC 4 cut(s) 662, 668, 1260, 1501
ApeKI GCWGC 3 cut(s) 1466, 1665, 2323
ApoI RAATTY 2 cut(s) 1601, 1902
AsiGI ACCGGT 1 cut(s) 165
Asp700I GAANNNNTTC 1 cut(s) 2347
AspS9I GGNCC 6 cut(s) 330, 352, 662, 1297, 1939, 2257
AsuC2I CCSGG 4 cut(s) 150, 419, 757, 1430
AsuHPI GGTGA 4 cut(s) 110, 1544, 1983, 2309
AvaII GGWCC 5 cut(s) 330, 352, 1297, 1939, 2257
BaeI ACNNNNGTAYC 2 cut(s) 160, 193
BalI TGGCCA 1 cut(s) 1503
BauI CACGAG 1 cut(s) 1803
BbsI GAAGAC 3 cut(s) 807, 1385, 2157
BbvCI CCTCAGC 1 cut(s) 1257
BbvI GCAGC 3 cut(s) 1478, 1652, 2335
BccI CCATC 9 cut(s) 60, 68, 89, 416, 801, 929, 956, 1183, 2320
BceAI ACGGC 2 cut(s) 1143, 2261
BciT130I CCWGG 4 cut(s) 486, 561, 912, 1949
BcnI CCSGG 4 cut(s) 150, 419, 757, 1430
BcoDI GTCTC 3 cut(s) 228, 1380, 1417
BfaI CTAG 4 cut(s) 159, 521, 2183, 2394
BfmI CTRYAG 2 cut(s) 468, 930
BfrI CTTAAG 1 cut(s) 1364
BglII AGATCT 1 cut(s) 1222
BisI GCNGC 3 cut(s) 1467, 1666, 2324
BlsI GCNGC 3 cut(s) 1468, 1667, 2325
Bme1390I CCNGG 8 cut(s) 150, 419, 486, 561, 757, 912, 1430, 1949
Bme18I GGWCC 5 cut(s) 330, 352, 1297, 1939, 2257
BmgT120I GGNCC 6 cut(s) 330, 352, 662, 1297, 1939, 2257
BmiI GGNNCC 1 cut(s) 1940
BmrFI CCNGG 8 cut(s) 150, 419, 486, 561, 757, 912, 1430, 1949
BmsI GCATC 7 cut(s) 646, 775, 1387, 1477, 1873, 2091, 2204
BpiI GAAGAC 3 cut(s) 807, 1385, 2157
BpmI CTGGAG 1 cut(s) 279
Bpu10I CCTNAGC 2 cut(s) 1257, 2319
BpuEI CTTGAG 3 cut(s) 1430, 1816, 2230
BpuMI CCSGG 4 cut(s) 150, 419, 757, 1430
BsaBI GATNNNNATC 1 cut(s) 594
BsaHI GRCGYC 1 cut(s) 366
BsaJI CCNNGG 6 cut(s) 148, 484, 559, 665, 911, 1504
BsaWI WCCGGW 1 cut(s) 165
Bsc4I CCNNNNNNNGG 5 cut(s) 66, 565, 566, 799, 1948
Bse118I RCCGGY 1 cut(s) 165
Bse1I ACTGG 4 cut(s) 403, 842, 1152, 1866
Bse3DI GCAATG 1 cut(s) 730
Bse8I GATNNNNATC 1 cut(s) 594
BseBI CCWGG 4 cut(s) 486, 561, 912, 1949
BseDI CCNNGG 6 cut(s) 148, 484, 559, 665, 911, 1504
BseGI GGATG 6 cut(s) 94, 427, 661, 971, 1402, 2038
BseJI GATNNNNATC 1 cut(s) 594
BseLI CCNNNNNNNGG 5 cut(s) 66, 565, 566, 799, 1948
BseMI GCAATG 1 cut(s) 730
BseMII CTCAG 1 cut(s) 1248
BseNI ACTGG 4 cut(s) 403, 842, 1152, 1866
BseRI GAGGAG 1 cut(s) 20
BseXI GCAGC 3 cut(s) 1478, 1652, 2335
BshFI GGCC 4 cut(s) 664, 670, 1262, 1503
BshTI ACCGGT 1 cut(s) 165
BsiSI CCGG 5 cut(s) 150, 166, 418, 756, 1430
BslFI GGGAC 4 cut(s) 68, 584, 1841, 1952
BslI CCNNNNNNNGG 5 cut(s) 66, 565, 566, 799, 1948
BsmAI GTCTC 3 cut(s) 228, 1380, 1417
BsmFI GGGAC 4 cut(s) 68, 584, 1841, 1952
BsmI GAATGC 1 cut(s) 2217
BsnI GGCC 4 cut(s) 664, 670, 1262, 1503
Bsp1407I TGTACA 1 cut(s) 382
Bsp143I GATC 8 cut(s) 222, 589, 1039, 1222, 1447, 1855, 2049, 2365
Bsp19I CCATGG 1 cut(s) 665
BspACI CCGC 1 cut(s) 1400
BspANI GGCC 4 cut(s) 664, 670, 1262, 1503
BspCNI CTCAG 1 cut(s) 1249
BspLI GGNNCC 1 cut(s) 1940
BspPI GGATC 6 cut(s) 230, 584, 1034, 1863, 2057, 2360
BspTI CTTAAG 1 cut(s) 1364
BsrDI GCAATG 1 cut(s) 730
BsrFI RCCGGY 1 cut(s) 165
BsrGI TGTACA 1 cut(s) 382
BsrI ACTGG 4 cut(s) 403, 842, 1152, 1866
BssAI RCCGGY 1 cut(s) 165
BssECI CCNNGG 6 cut(s) 148, 484, 559, 665, 911, 1504
BssMI GATC 8 cut(s) 222, 589, 1039, 1222, 1447, 1855, 2049, 2365
BssNI GRCGYC 1 cut(s) 366
BssSI CACGAG 1 cut(s) 1803
BssT1I CCWWGG 2 cut(s) 665, 1504
Bst2BI CACGAG 1 cut(s) 1803
Bst2UI CCWGG 4 cut(s) 486, 561, 912, 1949
Bst4CI ACNGT 3 cut(s) 214, 348, 1092
Bst6I CTCTTC 3 cut(s) 29, 38, 2313
BstACI GRCGYC 1 cut(s) 366
BstAFI CTTAAG 1 cut(s) 1364
BstAUI TGTACA 1 cut(s) 382
BstC8I GCNNGC 2 cut(s) 2240, 2328
BstDEI CTNAG 3 cut(s) 639, 1257, 2319
BstDSI CCRYGG 1 cut(s) 665
BstF5I GGATG 6 cut(s) 94, 427, 661, 971, 1402, 2038
BstKTI GATC 8 cut(s) 225, 592, 1042, 1225, 1450, 1858, 2052, 2368
BstMAI GTCTC 3 cut(s) 228, 1380, 1417
BstMBI GATC 8 cut(s) 222, 589, 1039, 1222, 1447, 1855, 2049, 2365
BstMWI GCNNNNNNNGC 8 cut(s) 159, 299, 517, 526, 870, 1325, 1625, 2273
BstNI CCWGG 4 cut(s) 486, 561, 912, 1949
BstNSI RCATGY 4 cut(s) 1198, 1711, 1990, 2132
BstSCI CCNGG 8 cut(s) 148, 417, 484, 559, 755, 910, 1428, 1947
BstSFI CTRYAG 2 cut(s) 468, 930
BstV1I GCAGC 3 cut(s) 1478, 1652, 2335
BstV2I GAAGAC 3 cut(s) 807, 1385, 2157
BstX2I RGATCY 3 cut(s) 1039, 1222, 1855
BstYI RGATCY 3 cut(s) 1039, 1222, 1855
BsuRI GGCC 4 cut(s) 664, 670, 1262, 1503
BtgI CCRYGG 1 cut(s) 665
BtsCI GGATG 6 cut(s) 94, 427, 661, 971, 1402, 2038
BtsIMutI CAGTG 3 cut(s) 219, 1097, 1145
Cac8I GCNNGC 2 cut(s) 2240, 2328
CaiI CAGNNNCTG 1 cut(s) 2346
Cfr10I RCCGGY 1 cut(s) 165
Cfr13I GGNCC 6 cut(s) 330, 352, 662, 1297, 1939, 2257
CseI GACGC 2 cut(s) 330, 374
Csp6I GTAC 2 cut(s) 169, 383
CspAI ACCGGT 1 cut(s) 165
CspCI CAANNNNNGTGG 2 cut(s) 195, 230
CviQI GTAC 2 cut(s) 169, 383
DdeI CTNAG 3 cut(s) 639, 1257, 2319
DpnI GATC 8 cut(s) 224, 591, 1041, 1224, 1449, 1857, 2051, 2367
DpnII GATC 8 cut(s) 222, 589, 1039, 1222, 1447, 1855, 2049, 2365
DrdI GACNNNNNNGTC 1 cut(s) 242
DseDI GACNNNNNNGTC 1 cut(s) 242
EaeI YGGCCR 1 cut(s) 1501
Eam1104I CTCTTC 3 cut(s) 29, 38, 2313
EarI CTCTTC 3 cut(s) 29, 38, 2313
Eco130I CCWWGG 2 cut(s) 665, 1504
Eco47I GGWCC 5 cut(s) 330, 352, 1297, 1939, 2257
Eco57I CTGAAG 6 cut(s) 104, 127, 749, 767, 1267, 1566
EcoO109I RGGNCCY 1 cut(s) 1297
EcoRI GAATTC 1 cut(s) 1601
EcoRII CCWGG 4 cut(s) 484, 559, 910, 1947
EcoT14I CCWWGG 2 cut(s) 665, 1504
EcoT22I ATGCAT 2 cut(s) 2106, 2219
ErhI CCWWGG 2 cut(s) 665, 1504
FalI AAGNNNNNCTT 2 cut(s) 2214, 2246
FaqI GGGAC 4 cut(s) 68, 584, 1841, 1952
FauNDI CATATG 1 cut(s) 1978
FblI GTMKAC 1 cut(s) 624
Fnu4HI GCNGC 3 cut(s) 1467, 1666, 2324
FokI GGATG 6 cut(s) 101, 434, 668, 978, 1409, 2045
Fsp4HI GCNGC 3 cut(s) 1467, 1666, 2324
FspBI CTAG 4 cut(s) 159, 521, 2183, 2394
GluI GCNGC 3 cut(s) 1467, 1666, 2324
GsuI CTGGAG 1 cut(s) 279
HaeIII GGCC 4 cut(s) 664, 670, 1262, 1503
HapII CCGG 5 cut(s) 150, 166, 418, 756, 1430
HgaI GACGC 2 cut(s) 330, 374
Hin1I GRCGYC 1 cut(s) 366
HindIII AAGCTT 2 cut(s) 436, 1720
HpaII CCGG 5 cut(s) 150, 166, 418, 756, 1430
HphI GGTGA 4 cut(s) 110, 1544, 1983, 2309
Hpy166II GTNNAC 3 cut(s) 333, 625, 1204
Hpy188III TCNNGA 9 cut(s) 258, 1043, 1285, 1575, 1584, 1700, 1826, 1833, 2209
Hpy8I GTNNAC 3 cut(s) 333, 625, 1204
Hpy99I CGWCG 1 cut(s) 2282
HpyAV CCTTC 6 cut(s) 79, 742, 1004, 1015, 2248, 2380
HpyCH4III ACNGT 3 cut(s) 214, 348, 1092
HpyCH4IV ACGT 1 cut(s) 171
HpyF10VI GCNNNNNNNGC 8 cut(s) 159, 299, 517, 526, 870, 1325, 1625, 2273
HpyF3I CTNAG 3 cut(s) 639, 1257, 2319
HpySE526I ACGT 1 cut(s) 171
Hsp92I GRCGYC 1 cut(s) 366
Kzo9I GATC 8 cut(s) 222, 589, 1039, 1222, 1447, 1855, 2049, 2365
Lsp1109I GCAGC 3 cut(s) 1478, 1652, 2335
LweI GCATC 7 cut(s) 646, 775, 1387, 1477, 1873, 2091, 2204
MaeI CTAG 4 cut(s) 159, 521, 2183, 2394
MaeII ACGT 1 cut(s) 171
MaeIII GTNAC 8 cut(s) 342, 546, 632, 759, 833, 1536, 1755, 1989
MalI GATC 8 cut(s) 224, 591, 1041, 1224, 1449, 1857, 2051, 2367
MboI GATC 8 cut(s) 222, 589, 1039, 1222, 1447, 1855, 2049, 2365
MfeI CAATTG 1 cut(s) 1162
MflI RGATCY 3 cut(s) 1039, 1222, 1855
MlsI TGGCCA 1 cut(s) 1503
MluNI TGGCCA 1 cut(s) 1503
MlyI GAGTC 2 cut(s) 1721, 1823
MmeI TCCRAC 1 cut(s) 1951
MnlI CCTC 9 cut(s) 38, 41, 265, 1252, 1368, 1396, 1405, 1746, 1833
Mox20I TGGCCA 1 cut(s) 1503
Mph1103I ATGCAT 2 cut(s) 2106, 2219
MroXI GAANNNNTTC 1 cut(s) 2347
MscI TGGCCA 1 cut(s) 1503
MseI TTAA 4 cut(s) 533, 1365, 1452, 1763
MslI CAYNNNNRTG 1 cut(s) 852
Msp20I TGGCCA 1 cut(s) 1503
MspCI CTTAAG 1 cut(s) 1364
MspI CCGG 5 cut(s) 150, 166, 418, 756, 1430
MspR9I CCNGG 8 cut(s) 150, 419, 486, 561, 757, 912, 1430, 1949
MunI CAATTG 1 cut(s) 1162
Mva1269I GAATGC 1 cut(s) 2217
MvaI CCWGG 4 cut(s) 486, 561, 912, 1949
MwoI GCNNNNNNNGC 8 cut(s) 159, 299, 517, 526, 870, 1325, 1625, 2273
NciI CCSGG 4 cut(s) 150, 419, 757, 1430
NcoI CCATGG 1 cut(s) 665
NdeI CATATG 1 cut(s) 1978
NdeII GATC 8 cut(s) 222, 589, 1039, 1222, 1447, 1855, 2049, 2365
NlaIV GGNNCC 1 cut(s) 1940
NmeAIII GCCGAG 1 cut(s) 1912
NmuCI GTSAC 5 cut(s) 342, 546, 833, 1755, 1989
NsiI ATGCAT 2 cut(s) 2106, 2219
NspI RCATGY 4 cut(s) 1198, 1711, 1990, 2132
PciI ACATGT 3 cut(s) 1194, 1986, 2128
PctI GAATGC 1 cut(s) 2217
PdmI GAANNNNTTC 1 cut(s) 2347
PfeI GAWTC 8 cut(s) 155, 595, 752, 943, 1593, 1645, 2174, 2384
PflFI GACNNNGTC 1 cut(s) 2156
PflMI CCANNNNNTGG 2 cut(s) 66, 1948
PfoI TCCNGGA 2 cut(s) 417, 1947
PinAI ACCGGT 1 cut(s) 165
PkrI GCNGC 3 cut(s) 1468, 1667, 2325
PleI GAGTC 2 cut(s) 1721, 1823
PpsI GAGTC 2 cut(s) 1721, 1823
PpuMI RGGWCCY 1 cut(s) 1297
PscI ACATGT 3 cut(s) 1194, 1986, 2128
PsiI TTATAA 3 cut(s) 306, 717, 1527
Psp5II RGGWCCY 1 cut(s) 1297
Psp6I CCWGG 4 cut(s) 484, 559, 910, 1947
PspGI CCWGG 4 cut(s) 484, 559, 910, 1947
PspN4I GGNNCC 1 cut(s) 1940
PspPI GGNCC 6 cut(s) 330, 352, 662, 1297, 1939, 2257
PspPPI RGGWCCY 1 cut(s) 1297
PstNI CAGNNNCTG 1 cut(s) 2346
PsuI RGATCY 3 cut(s) 1039, 1222, 1855
PsyI GACNNNGTC 1 cut(s) 2156
RsaI GTAC 2 cut(s) 170, 384
RsaNI GTAC 2 cut(s) 169, 383
RseI CAYNNNNRTG 1 cut(s) 852
SaqAI TTAA 4 cut(s) 533, 1365, 1452, 1763
SatI GCNGC 3 cut(s) 1467, 1666, 2324
Sau3AI GATC 8 cut(s) 222, 589, 1039, 1222, 1447, 1855, 2049, 2365
Sau96I GGNCC 6 cut(s) 330, 352, 662, 1297, 1939, 2257
SchI GAGTC 2 cut(s) 1721, 1823
ScrFI CCNGG 8 cut(s) 150, 419, 486, 561, 757, 912, 1430, 1949
SfaNI GCATC 7 cut(s) 646, 775, 1387, 1477, 1873, 2091, 2204
SfcI CTRYAG 2 cut(s) 468, 930
SinI GGWCC 5 cut(s) 330, 352, 1297, 1939, 2257
SmiMI CAYNNNNRTG 1 cut(s) 852
SmlI CTYRAG 4 cut(s) 1364, 1409, 1831, 2209
SmoI CTYRAG 4 cut(s) 1364, 1409, 1831, 2209
SsiI CCGC 1 cut(s) 1400
SspI AATATT 3 cut(s) 617, 883, 1929
SspMI CTAG 4 cut(s) 159, 521, 2183, 2394
StyD4I CCNGG 8 cut(s) 148, 417, 484, 559, 755, 910, 1428, 1947
StyI CCWWGG 2 cut(s) 665, 1504
TaaI ACNGT 3 cut(s) 214, 348, 1092
TaiI ACGT 1 cut(s) 174
TaqI TCGA 6 cut(s) 588, 979, 1052, 1446, 1596, 2428
TaqII GACCGA 2 cut(s) 340, 2274
TatI WGTACW 1 cut(s) 382
TfiI GAWTC 8 cut(s) 155, 595, 752, 943, 1593, 1645, 2174, 2384
Tru1I TTAA 4 cut(s) 533, 1365, 1452, 1763
Tru9I TTAA 4 cut(s) 533, 1365, 1452, 1763
TscAI CASTG 3 cut(s) 219, 1097, 1152
TseFI GTSAC 5 cut(s) 342, 546, 833, 1755, 1989
TseI GCWGC 3 cut(s) 1466, 1665, 2323
Tsp45I GTSAC 5 cut(s) 342, 546, 833, 1755, 1989
TspDTI ATGAA 9 cut(s) 87, 287, 506, 1811, 2166, 2217, 2275, 2362, 2397
TspRI CASTG 3 cut(s) 219, 1097, 1152
Tth111I GACNNNGTC 1 cut(s) 2156
Van91I CCANNNNNTGG 2 cut(s) 66, 1948
Vha464I CTTAAG 1 cut(s) 1364
VpaK11BI GGWCC 5 cut(s) 330, 352, 1297, 1939, 2257
XapI RAATTY 2 cut(s) 1601, 1902
XceI RCATGY 4 cut(s) 1198, 1711, 1990, 2132
XcmI CCANNNNNNNNNTGG 2 cut(s) 170, 1511
XmiI GTMKAC 1 cut(s) 624
XmnI GAANNNNTTC 1 cut(s) 2347
XspI CTAG 4 cut(s) 159, 521, 2183, 2394
Zsp2I ATGCAT 2 cut(s) 2106, 2219
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.