Rh5CG048100

serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5C
OG0000112
Physical Location & Seq
Reverse (-)
3397350 .. 3400589
3240 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5CG048100.1

Sequence Viewer

Length: 1530 bp
ATGTTACTGAAAGCTCTGCTTCTCATCCTCCTTTTCCAACTGTCCACTTCCAAGGACACCATAACATGGAACGAAGAGCAAGTAAAAGATGGTGACCTTTTAGTGTCCAAAGGAAACAACTTTGAATTGGGTTTCTTCAGCCCCAGAAACTCTAGCTACCGCTATATTGGAATTTGGTATTCCATGTCTCAGCTATCTGACCAAACAGTGGTGTGGGTGGCAAACAGAAACAACCCCATCAATGATACATCAGGTGTTCTCACAATAAACAGGTATGGAAAACTAGTCATTTATGCTCACAATATGGAGAACATTCCTATATGGTCTGCAAATATGTCTCAGTCAGTCATAAACACAAACCCCTTATCTGCACAACTTTTAGATACAGGAAACTTAGTTCTGACCCAGGATGGTGAAAGTGAAAGCTTTATTGTATGGCAGAGTTTTGATTGTCCTACAGATACTCTAATCCCTGGTATGAAACTTGGGGTGAGTTGGAAAACTGGTTTAGAGTGGTTTTTAACGTCTTGGAAGTCACAAGATGACCCTGGAACTGGGGACTACAGCCATAGGCTTTATTGGAATCAGACGGTTGTGCTACAATTTTTTCTGTTTAAGGGTTTAACTACTAGGGTTTGGAGAAGTGATCCTGGGCCTAATTGGCGCAGTTTTGTTAGTAATAATGATGAAACATATTACCTACAGTATAGTGATAACTCTAGAAAATTTAGAATGGTTGTGAATGATTCTGGGTTATTGCAGCATTTGACATGGAATGATGGTGACCATCAATGGAAGGAACTATGGGCTGTACCGAAATACCGTTGTGACATGTATGGACAGTGTGGTGCCTATAGTAAATGTAACCCTGACAATATTAATATGTTTGAGTGCGAGTGTTTACCAGGGTATGAACCTAAATCTATAAATGACTGGAATCAGAATGATGGGTCAGATGGATGTCTGAGTAAGCGAATTGGGAGTGTTGGAGATGGGTTTTTAGAGGTGGCAAGGGTGAAAGCTCCAGACACATCGACAGTAGTAGCACGACTGGATACTGGTATGAGTGCCACAGAGTGCAAGCAGGAGTGTTTGAGAAATTGTTCTTGCACAGCATGTATGAGCTTCAATAATAAAGGGCGCATTGATTGCTTGACATGGTATGGTGAGCTGCTGGATATTGTAGAGCACACGGATGGAGGACAAGTTCTATATGTTCGTGTGGATGAAAACGAATTCAAGTTGTCGAAAAGCGGTGCGATTCTGCCGCCATATTTGCAGCACATTTATGTTGTCGCCGACGAGCTGAAGCAACGGAAGCGAGATTTGAGGATGTACATGAATGTGGACGATTCTTCCGTCGCCGCCGACCTTTGCAACGCGCTGTGGAGGCCTGTGTTATCTCAACCACATAATCAAGGTTTTCTGTTATCTCCTGATGAAACCAGTGAAAATAATAGTCCAAAAATCACACGAAATCTAAAAATTGCAGAAGAAGAATCACCAGCAGGATCATTCAGGGAATCATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
B_lectin DUF3403 PAN_2 Pkinase Pkinase_Tyr S_locus_glycop

Protein Analysis

509

Amino Acids

57.86

Weight (kDa)

5.04

Isoelectric Point (pI)

43.07

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 69 - 178 6.8e-35 D-mannose binding lectin
S_locus_glycop PF00954 223 - 308 5.2e-19 S-locus glycoprotein domain
PAN_2 PF08276 328 - 394 2e-15 PAN-like domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000112)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g03320 FvH4_3g03322 FvH4_3g03323 FvH4_3g03340 FvH4_3g03350 FvH4_3g03351 FvH4_3g03370 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g06140 FvH4_6g00257 FvH4_6g00257 FvH4_6g00270 FvH4_6g00300 FvH4_6g20800 FvH4_6g20800 FvH4_6g20800 FvH4_6g20800 FvH4_6g20800
malus_domestica MD05G1232700.v1.1 MD05G1327700.v1.1 MD05G1327800.v1.1 MD05G1327900.v1.1 MD05G1328000.v1.1 MD05G1328200.v1.1 MD05G1328300.v1.1 MD05G1328500.v1.1 MD05G1332000.v1.1 MD05G1332100.v1.1 MD10G1307600.v1.1 MD10G1307800.v1.1
prunus_persica Prupe.4G031900_v2.0.a1 Prupe.4G032000_v2.0.a1 Prupe.4G032000_v2.0.a1 Prupe.4G032100_v2.0.a1 Prupe.4G032200_v2.0.a1 Prupe.4G032200_v2.0.a1 Prupe.4G032200_v2.0.a1
pyrus_communis pycom05g30180 pycom05g30190 pycom05g30200 pycom05g30210 pycom10g25920 pycom10g25930
rosa_chinensis RchiOBHm_Chr2g0130831 RchiOBHm_Chr2g0132531 RchiOBHm_Chr2g0132541 RchiOBHm_Chr3g0455681 RchiOBHm_Chr3g0476681 RchiOBHm_Chr3g0476761 RchiOBHm_Chr3g0476771 RchiOBHm_Chr3g0476791 RchiOBHm_Chr3g0476801 RchiOBHm_Chr3g0476811 RchiOBHm_Chr4g0413551 RchiOBHm_Chr4g0413561 RchiOBHm_Chr5g0002911 RchiOBHm_Chr5g0005071 RchiOBHm_Chr5g0005101 RchiOBHm_Chr5g0005111 RchiOBHm_Chr5g0005121 RchiOBHm_Chr5g0005131 RchiOBHm_Chr5g0005141 RchiOBHm_Chr5g0005161 RchiOBHm_Chr5g0005171 RchiOBHm_Chr5g0006341 RchiOBHm_Chr5g0046161 RchiOBHm_Chr5g0046171 RchiOBHm_Chr5g0046181 RchiOBHm_Chr5g0046221 RchiOBHm_Chr5g0046231 RchiOBHm_Chr7g0224061 RchiOBHm_Chr7g0224081 RchiOBHm_Chr7g0224101 RchiOBHm_Chr7g0224111 RchiOBHm_Chr7g0224121
rosa_laevigata RLG00000010193 RLG00000019146 RLG00000019148 RLG00000019149 RLG00000019150 RLG00000023750 RLG00000023751 RLG00000023753 RLG00000029486 RLG00000031068 RLG00000031069 RLG00000031284 RLG00000031285 RLG00000031286 RLG00000031289 RLG00000031290 RLG00000031291 RLG00000031292 RLG00000031293 RLG00000031294 RLG00000031295 RLG00000031296 RLG00000031297 RLG00000031363 RLG00000032618 RLG00000032619
rosa_multiflora Rmu_co8147584.1_g000001 Rmu_co8205828.1_g000001 Rmu_co8373645.1_g000001 Rmu_co8407679.1_g000001 Rmu_co8452561.1_g000001 Rmu_sc0001035.1_g000076 Rmu_sc0001884.1_g000026 Rmu_sc0001884.1_g000027 Rmu_sc0001884.1_g000035 Rmu_sc0002157.1_g000026 Rmu_sc0002399.1_g000006 Rmu_sc0002399.1_g000007 Rmu_sc0002883.1_g000010 Rmu_sc0003629.1_g000014 Rmu_sc0003884.1_g000004 Rmu_sc0007865.1_g000005 Rmu_sc0008085.1_g000013 Rmu_sc0008085.1_g000014 Rmu_sc0008085.1_g000016 Rmu_sc0008085.1_g000018 Rmu_sc0008432.1_g000004 Rmu_sc0008714.1_g000002 Rmu_sc0009296.1_g000008 Rmu_sc0009296.1_g000009 Rmu_sc0009296.1_g000011 Rmu_sc0010281.1_g000001 Rmu_sc0010281.1_g000002 Rmu_sc0010714.1_g000011 Rmu_sc0010714.1_g000016 Rmu_sc0011169.1_g000001 Rmu_sc0011169.1_g000007 Rmu_sc0013603.1_g000006 Rmu_sc0020478.1_g000003 Rmu_sc0020478.1_g000007 Rmu_sc0025106.1_g000012 Rmu_sc0032709.1_g000001 Rmu_sc0033028.1_g000001
rosa_roxburghii Rroxscaffold_1G00069570 Rroxscaffold_1G00069610 Rroxscaffold_1G00069620 Rroxscaffold_1G00070480 Rroxscaffold_1G00070490 Rroxscaffold_1G00070500 Rroxscaffold_1G00070510 Rroxscaffold_1G00070520 Rroxscaffold_1G00070530 Rroxscaffold_1G00070540 Rroxscaffold_1G00070550 Rroxscaffold_1G00070590 Rroxscaffold_1G00072950 Rroxscaffold_1G00073080 Rroxscaffold_2G00111810 Rroxscaffold_2G00111820 Rroxscaffold_2G00113530 Rroxscaffold_2G00113870 Rroxscaffold_6G00405010 Rroxscaffold_6G00405020 Rroxscaffold_6G00423590 Rroxscaffold_6G00424100
rosa_rugosa Rorug02G0293200 Rorug02G0293300 Rorug02G0293400 Rorug02G0305900 Rorug02G0305900 Rorug03G0009100 Rorug03G0157000 Rorug03G0157000 Rorug03G0304900 Rorug04G0400500 Rorug04G0415200 Rorug04G0415300 Rorug04G0415400 Rorug04G0415500 Rorug04G0421100 Rorug05G0068000 Rorug05G0068100 Rorug05G0068200 Rorug05G0068500 Rorug05G0224600 Rorug05G0224700
rosa_samantha Rh2CG331700 Rh2CG341600 Rh2CG341700 Rh2DG381200 Rh3DG071200 Rh3DG233400 Rh3DG233500 Rh3DG233600 Rh5AG043100 Rh5CG026000 Rh5CG047700 Rh5CG047800 Rh5CG047900 Rh5CG048000 Rh5CG048100 Rh5CG048300 Rh5CG056500 Rh5CG340500 Rh5CG340700 Rh5CG340800 Rh7AG365000
rosa_wichuraiana Rw0G002360 Rw0G002370 Rw0G012520 Rw0G018230 Rw0G019190 Rw2G027480 Rw2G029150 Rw3G005520 Rw3G005880 Rw3G005890 Rw3G018840 Rw3G018850 Rw3G018870 Rw3G018880 Rw3G020740 Rw5G002190 Rw5G004180 Rw5G004190 Rw5G004890 Rw5G013960 Rw5G014000 Rw5G028610 Rw7G030910 Rw7G030920

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 848
AccB7I CCANNNNNTGG 2 cut(s) 66, 208
AccII CGCG 1 cut(s) 1382
AciI CCGC 4 cut(s) 160, 1254, 1268, 1365
AclWI GGATC 2 cut(s) 641, 1519
AcsI RAATTY 3 cut(s) 171, 725, 1235
AcuI CTGAAG 2 cut(s) 121, 1328
AdeI CACNNNGTG 1 cut(s) 1077
AfaI GTAC 2 cut(s) 813, 1337
AfiI CCNNNNNNNGG 3 cut(s) 66, 208, 554
AflIII ACRYGT 1 cut(s) 831
AgsI TTSAA 3 cut(s) 125, 1129, 1240
AhlI ACTAGT 1 cut(s) 283
AjnI CCWGG 5 cut(s) 405, 472, 547, 649, 904
AloI GAACNNNNNNTCC 4 cut(s) 381, 413, 1191, 1223
AluBI AGCT 8 cut(s) 14, 156, 193, 426, 1022, 1125, 1171, 1306
AluI AGCT 8 cut(s) 14, 156, 193, 426, 1022, 1125, 1171, 1306
Alw21I GWGCWC 1 cut(s) 1191
Alw26I GTCTC 2 cut(s) 192, 342
AlwI GGATC 2 cut(s) 641, 1519
AoxI GGCC 2 cut(s) 653, 1391
ApeKI GCWGC 3 cut(s) 760, 1171, 1279
ApoI RAATTY 3 cut(s) 171, 725, 1235
AseI ATTAAT 1 cut(s) 879
Asp700I GAANNNNTTC 1 cut(s) 1102
AspLEI GCGC 3 cut(s) 666, 1143, 1384
AspS9I GGNCC 1 cut(s) 653
AsuHPI GGTGA 7 cut(s) 104, 425, 502, 794, 1027, 1178, 1494
BanI GGYRCC 1 cut(s) 848
Bbv12I GWGCWC 1 cut(s) 1191
BbvI GCAGC 3 cut(s) 772, 1158, 1291
BccI CCATC 9 cut(s) 83, 245, 404, 773, 795, 941, 950, 986, 1190
BciT130I CCWGG 5 cut(s) 407, 474, 549, 651, 906
BciVI GTATCC 1 cut(s) 1048
BcoDI GTCTC 2 cut(s) 192, 342
BcuI ACTAGT 1 cut(s) 283
BfaI CTAG 4 cut(s) 153, 284, 630, 720
BfmI CTRYAG 4 cut(s) 456, 562, 701, 853
BfuI GTATCC 1 cut(s) 1048
BglI GCCNNNNNGGC 1 cut(s) 661
BisI GCNGC 5 cut(s) 761, 1172, 1268, 1280, 1365
BlsI GCNGC 5 cut(s) 762, 1173, 1269, 1281, 1366
Bme1390I CCNGG 5 cut(s) 407, 474, 549, 651, 906
BmgT120I GGNCC 1 cut(s) 653
BmiI GGNNCC 1 cut(s) 850
BmrFI CCNGG 5 cut(s) 407, 474, 549, 651, 906
BmrI ACTGGG 1 cut(s) 564
BmuI ACTGGG 1 cut(s) 564
BpmI CTGGAG 1 cut(s) 1008
BsaJI CCNNGG 6 cut(s) 51, 405, 472, 547, 650, 905
BsaXI ACNNNNNCTCC 2 cut(s) 1191, 1221
Bsc4I CCNNNNNNNGG 3 cut(s) 66, 208, 554
Bse1I ACTGG 6 cut(s) 508, 559, 938, 1056, 1063, 1446
BseBI CCWGG 5 cut(s) 407, 474, 549, 651, 906
BseDI CCNNGG 6 cut(s) 51, 405, 472, 547, 650, 905
BseGI GGATG 6 cut(s) 24, 415, 965, 1201, 1231, 1338
BseLI CCNNNNNNNGG 3 cut(s) 66, 208, 554
BseMII CTCAG 3 cut(s) 203, 353, 956
BseNI ACTGG 6 cut(s) 508, 559, 938, 1056, 1063, 1446
BseXI GCAGC 3 cut(s) 772, 1158, 1291
BsgI GTGCAG 1 cut(s) 354
Bsh1236I CGCG 1 cut(s) 1382
BshFI GGCC 2 cut(s) 655, 1393
BshNI GGYRCC 1 cut(s) 848
BsiHKAI GWGCWC 1 cut(s) 1191
BslFI GGGAC 1 cut(s) 572
BslI CCNNNNNNNGG 3 cut(s) 66, 208, 554
BsmAI GTCTC 2 cut(s) 192, 342
BsmFI GGGAC 1 cut(s) 572
BsnI GGCC 2 cut(s) 655, 1393
Bsp1286I GDGCHC 1 cut(s) 1191
Bsp1407I TGTACA 1 cut(s) 1335
Bsp143I GATC 2 cut(s) 646, 1511
BspACI CCGC 4 cut(s) 160, 1254, 1268, 1365
BspANI GGCC 2 cut(s) 655, 1393
BspCNI CTCAG 3 cut(s) 202, 352, 957
BspFNI CGCG 1 cut(s) 1382
BspLI GGNNCC 1 cut(s) 850
BspPI GGATC 2 cut(s) 641, 1519
BspQI GCTCTTC 1 cut(s) 69
BspT107I GGYRCC 1 cut(s) 848
BsrGI TGTACA 1 cut(s) 1335
BsrI ACTGG 6 cut(s) 508, 559, 938, 1056, 1063, 1446
BssECI CCNNGG 6 cut(s) 51, 405, 472, 547, 650, 905
BssMI GATC 2 cut(s) 646, 1511
BssT1I CCWWGG 1 cut(s) 51
Bst2UI CCWGG 5 cut(s) 407, 474, 549, 651, 906
Bst4CI ACNGT 7 cut(s) 42, 208, 592, 705, 824, 843, 1039
Bst6I CTCTTC 1 cut(s) 69
BstAPI GCANNNNNTGC 1 cut(s) 1149
BstAUI TGTACA 1 cut(s) 1335
BstC8I GCNNGC 1 cut(s) 1082
BstDEI CTNAG 4 cut(s) 189, 339, 394, 965
BstEII GGTNACC 2 cut(s) 92, 782
BstF5I GGATG 6 cut(s) 24, 415, 965, 1201, 1231, 1338
BstFNI CGCG 1 cut(s) 1382
BstHHI GCGC 3 cut(s) 666, 1143, 1384
BstKTI GATC 2 cut(s) 649, 1514
BstMAI GTCTC 2 cut(s) 192, 342
BstMBI GATC 2 cut(s) 646, 1511
BstMWI GCNNNNNNNGC 5 cut(s) 661, 1149, 1276, 1318, 1390
BstNI CCWGG 5 cut(s) 407, 474, 549, 651, 906
BstNSI RCATGY 2 cut(s) 835, 1119
BstPI GGTNACC 2 cut(s) 92, 782
BstSCI CCNGG 5 cut(s) 405, 472, 547, 649, 904
BstSFI CTRYAG 4 cut(s) 456, 562, 701, 853
BstUI CGCG 1 cut(s) 1382
BstV1I GCAGC 3 cut(s) 772, 1158, 1291
BsuI GTATCC 1 cut(s) 1048
BsuRI GGCC 2 cut(s) 655, 1393
BtsCI GGATG 6 cut(s) 24, 415, 965, 1201, 1231, 1338
BtsIMutI CAGTG 3 cut(s) 213, 848, 1453
Cac8I GCNNGC 1 cut(s) 1082
CfoI GCGC 3 cut(s) 666, 1143, 1384
Cfr13I GGNCC 1 cut(s) 653
Csp6I GTAC 2 cut(s) 812, 1336
CviAII CATG 7 cut(s) 66, 184, 771, 832, 1116, 1158, 1339
CviQI GTAC 2 cut(s) 812, 1336
DdeI CTNAG 4 cut(s) 189, 339, 394, 965
DpnI GATC 2 cut(s) 648, 1513
DpnII GATC 2 cut(s) 646, 1511
DraIII CACNNNGTG 1 cut(s) 1077
Eam1104I CTCTTC 1 cut(s) 69
EarI CTCTTC 1 cut(s) 69
Eco130I CCWWGG 1 cut(s) 51
Eco147I AGGCCT 1 cut(s) 1393
Eco57I CTGAAG 2 cut(s) 121, 1328
Eco91I GGTNACC 2 cut(s) 92, 782
EcoO65I GGTNACC 2 cut(s) 92, 782
EcoRI GAATTC 1 cut(s) 1235
EcoRII CCWGG 5 cut(s) 405, 472, 547, 649, 904
EcoT14I CCWWGG 1 cut(s) 51
ErhI CCWWGG 1 cut(s) 51
FaeI CATG 7 cut(s) 69, 187, 774, 835, 1119, 1161, 1342
FalI AAGNNNNNCTT 1 cut(s) 35
FaqI GGGAC 1 cut(s) 572
FatI CATG 7 cut(s) 65, 183, 770, 831, 1115, 1157, 1338
Fnu4HI GCNGC 5 cut(s) 761, 1172, 1268, 1280, 1365
FokI GGATG 6 cut(s) 11, 422, 972, 1208, 1238, 1345
Fsp4HI GCNGC 5 cut(s) 761, 1172, 1268, 1280, 1365
FspBI CTAG 4 cut(s) 153, 284, 630, 720
GlaI GCGC 3 cut(s) 665, 1142, 1383
GluI GCNGC 5 cut(s) 761, 1172, 1268, 1280, 1365
GsuI CTGGAG 1 cut(s) 1008
HaeIII GGCC 2 cut(s) 655, 1393
HhaI GCGC 3 cut(s) 666, 1143, 1384
Hin1II CATG 7 cut(s) 69, 187, 774, 835, 1119, 1161, 1342
Hin6I GCGC 3 cut(s) 664, 1141, 1382
HinP1I GCGC 3 cut(s) 664, 1141, 1382
HindIII AAGCTT 1 cut(s) 424
HinfI GANTC 7 cut(s) 583, 746, 937, 1261, 1352, 1499, 1523
HphI GGTGA 7 cut(s) 104, 425, 502, 794, 1027, 1178, 1494
Hpy166II GTNNAC 3 cut(s) 45, 902, 1348
Hpy188I TCNGA 6 cut(s) 199, 402, 588, 942, 955, 966
Hpy188III TCNNGA 3 cut(s) 720, 1025, 1436
Hpy8I GTNNAC 3 cut(s) 45, 902, 1348
Hpy99I CGWCG 2 cut(s) 1304, 1364
HpyAV CCTTC 1 cut(s) 790
HpyCH4III ACNGT 7 cut(s) 42, 208, 592, 705, 824, 843, 1039
HpyCH4IV ACGT 1 cut(s) 524
HpyCH4V TGCA 8 cut(s) 329, 371, 760, 1080, 1110, 1279, 1377, 1490
HpyF10VI GCNNNNNNNGC 5 cut(s) 661, 1149, 1276, 1318, 1390
HpyF3I CTNAG 4 cut(s) 189, 339, 394, 965
HpySE526I ACGT 1 cut(s) 524
Hsp92II CATG 7 cut(s) 69, 187, 774, 835, 1119, 1161, 1342
HspAI GCGC 3 cut(s) 664, 1141, 1382
Kzo9I GATC 2 cut(s) 646, 1511
LguI GCTCTTC 1 cut(s) 69
LmnI GCTCC 1 cut(s) 1027
Lsp1109I GCAGC 3 cut(s) 772, 1158, 1291
MaeI CTAG 4 cut(s) 153, 284, 630, 720
MaeII ACGT 1 cut(s) 524
MaeIII GTNAC 6 cut(s) 3, 92, 534, 782, 827, 863
MalI GATC 2 cut(s) 648, 1513
MboI GATC 2 cut(s) 646, 1511
MboII GAAGA 5 cut(s) 86, 127, 1347, 1505, 1508
MhlI GDGCHC 1 cut(s) 1191
MluCI AATT 9 cut(s) 125, 171, 602, 658, 725, 975, 1099, 1235, 1485
MmeI TCCRAC 3 cut(s) 61, 476, 967
MnlI CCTC 5 cut(s) 38, 997, 1193, 1323, 1383
MroXI GAANNNNTTC 1 cut(s) 1102
MseI TTAA 4 cut(s) 521, 615, 623, 879
MslI CAYNNNNRTG 3 cut(s) 1194, 1287, 1343
MspR9I CCNGG 5 cut(s) 407, 474, 549, 651, 906
MvaI CCWGG 5 cut(s) 407, 474, 549, 651, 906
MvnI CGCG 1 cut(s) 1382
MwoI GCNNNNNNNGC 5 cut(s) 661, 1149, 1276, 1318, 1390
NdeII GATC 2 cut(s) 646, 1511
NlaIII CATG 7 cut(s) 69, 187, 774, 835, 1119, 1161, 1342
NlaIV GGNNCC 1 cut(s) 850
NmuCI GTSAC 4 cut(s) 92, 534, 782, 827
NspI RCATGY 2 cut(s) 835, 1119
PceI AGGCCT 1 cut(s) 1393
PciI ACATGT 1 cut(s) 831
PciSI GCTCTTC 1 cut(s) 69
PcsI WCGNNNNNNNCGW 1 cut(s) 1356
PdmI GAANNNNTTC 1 cut(s) 1102
PfeI GAWTC 7 cut(s) 583, 746, 937, 1261, 1352, 1499, 1523
PflMI CCANNNNNTGG 2 cut(s) 66, 208
PkrI GCNGC 5 cut(s) 762, 1173, 1269, 1281, 1366
PscI ACATGT 1 cut(s) 831
PshBI ATTAAT 1 cut(s) 879
Psp6I CCWGG 5 cut(s) 405, 472, 547, 649, 904
PspEI GGTNACC 2 cut(s) 92, 782
PspGI CCWGG 5 cut(s) 405, 472, 547, 649, 904
PspN4I GGNNCC 1 cut(s) 850
PspPI GGNCC 1 cut(s) 653
RsaI GTAC 2 cut(s) 813, 1337
RsaNI GTAC 2 cut(s) 812, 1336
RseI CAYNNNNRTG 3 cut(s) 1194, 1287, 1343
SapI GCTCTTC 1 cut(s) 69
SaqAI TTAA 4 cut(s) 521, 615, 623, 879
SatI GCNGC 5 cut(s) 761, 1172, 1268, 1280, 1365
Sau3AI GATC 2 cut(s) 646, 1511
Sau96I GGNCC 1 cut(s) 653
ScrFI CCNGG 5 cut(s) 407, 474, 549, 651, 906
SduI GDGCHC 1 cut(s) 1191
SfcI CTRYAG 4 cut(s) 456, 562, 701, 853
SmiMI CAYNNNNRTG 3 cut(s) 1194, 1287, 1343
SpeI ACTAGT 1 cut(s) 283
Sse9I AATT 9 cut(s) 125, 171, 602, 658, 725, 975, 1099, 1235, 1485
SseBI AGGCCT 1 cut(s) 1393
SsiI CCGC 4 cut(s) 160, 1254, 1268, 1365
SspI AATATT 1 cut(s) 877
SspMI CTAG 4 cut(s) 153, 284, 630, 720
StuI AGGCCT 1 cut(s) 1393
StyD4I CCNGG 5 cut(s) 405, 472, 547, 649, 904
StyI CCWWGG 1 cut(s) 51
TaaI ACNGT 7 cut(s) 42, 208, 592, 705, 824, 843, 1039
TaiI ACGT 1 cut(s) 527
TaqI TCGA 2 cut(s) 1034, 1247
TasI AATT 9 cut(s) 125, 171, 602, 658, 725, 975, 1099, 1235, 1485
TatI WGTACW 1 cut(s) 1335
TauI GCSGC 2 cut(s) 1270, 1367
TfiI GAWTC 7 cut(s) 583, 746, 937, 1261, 1352, 1499, 1523
Tru1I TTAA 4 cut(s) 521, 615, 623, 879
Tru9I TTAA 4 cut(s) 521, 615, 623, 879
TscAI CASTG 3 cut(s) 213, 848, 1453
TseFI GTSAC 4 cut(s) 92, 534, 782, 827
TseI GCWGC 3 cut(s) 760, 1171, 1279
Tsp45I GTSAC 4 cut(s) 92, 534, 782, 827
TspDTI ATGAA 6 cut(s) 494, 702, 927, 1242, 1355, 1455
TspGWI ACGGA 3 cut(s) 1208, 1330, 1348
TspRI CASTG 3 cut(s) 213, 848, 1453
Van91I CCANNNNNTGG 2 cut(s) 66, 208
VspI ATTAAT 1 cut(s) 879
XapI RAATTY 3 cut(s) 171, 725, 1235
XbaI TCTAGA 1 cut(s) 719
XceI RCATGY 2 cut(s) 835, 1119
XmnI GAANNNNTTC 1 cut(s) 1102
XspI CTAG 4 cut(s) 153, 284, 630, 720
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.