RLG00000019149

serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
Physical Location & Seq
Reverse (-)
47402463 .. 47406008
3546 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000019149

Sequence Viewer

Length: 744 bp
ATGTTACTGAAAGCTCTGCTTCTCATCCTCCTTTTCCAACTTTGCACTTCCAAGGACACCATAACATGGAACGAAGAGCAAGTCAAAGATGGTGACCTTTTAGTGTCCAAAGGAAGCAACTTTGAATTGGGTTTCTTCAGCCTTAGAAACTCTAGCTACCGCTATGTTGGAATTTGGTATTCCATGTCAAAGATATCTGAACAAACAGTGGTGTGGGTAGCAAACAGAAACAACCCCATCAATGATACATCAGGAGTTCTCACAATAAACAGGATAAGACAGCCAGAGTTGTTGGAACATGTGGGTATATGTCACCAGAGTATGCAGTTTTTGAAAGATATTCAACAAAAGTTGGATGTCTTTAGCTTCAGGATCATGATATTGGAGATCGTAAGCGGCAAGAAAAACTCTGGTTCTTATCAGGAAGATCATTCCATGAACTTGACAGGAAATATGTGGGGTGAAGACAGAGCTTTAGCTATTCTGGATTCCTCACTAGAGTTATATCAACCAGATGAAGTCTTAAGATGCATTCAAGTTGGGCTCTTATGTGTGCAAGAAGATTCAAAGGACTGGCCTACCATGTCAGCTGCTGTTTTCATGTTGAGTGGTGAAGCATCTCTTTCAACTCCTAAGCAGCCTGCATTTGTTTTTAGAAACAGTGCATGCAGTAATGTTCCATCCCTTACAAATAGATTATGTTCAATAAACTACTTAACAATAACCAATGTGGATGTTCGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

248

Amino Acids

27.94

Weight (kDa)

5.45

Isoelectric Point (pI)

30.86

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 69 - 91 7.5e-06 D-mannose binding lectin
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000112)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g03320 FvH4_3g03322 FvH4_3g03323 FvH4_3g03340 FvH4_3g03350 FvH4_3g03351 FvH4_3g03370 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g06140 FvH4_6g00257 FvH4_6g00257 FvH4_6g00270 FvH4_6g00300 FvH4_6g20800 FvH4_6g20800 FvH4_6g20800 FvH4_6g20800 FvH4_6g20800
malus_domestica MD05G1232700.v1.1 MD05G1327700.v1.1 MD05G1327800.v1.1 MD05G1327900.v1.1 MD05G1328000.v1.1 MD05G1328200.v1.1 MD05G1328300.v1.1 MD05G1328500.v1.1 MD05G1332000.v1.1 MD05G1332100.v1.1 MD10G1307600.v1.1 MD10G1307800.v1.1
prunus_persica Prupe.4G031900_v2.0.a1 Prupe.4G032000_v2.0.a1 Prupe.4G032000_v2.0.a1 Prupe.4G032100_v2.0.a1 Prupe.4G032200_v2.0.a1 Prupe.4G032200_v2.0.a1 Prupe.4G032200_v2.0.a1
pyrus_communis pycom05g30180 pycom05g30190 pycom05g30200 pycom05g30210 pycom10g25920 pycom10g25930
rosa_chinensis RchiOBHm_Chr2g0130831 RchiOBHm_Chr2g0132531 RchiOBHm_Chr2g0132541 RchiOBHm_Chr3g0455681 RchiOBHm_Chr3g0476681 RchiOBHm_Chr3g0476761 RchiOBHm_Chr3g0476771 RchiOBHm_Chr3g0476791 RchiOBHm_Chr3g0476801 RchiOBHm_Chr3g0476811 RchiOBHm_Chr4g0413551 RchiOBHm_Chr4g0413561 RchiOBHm_Chr5g0002911 RchiOBHm_Chr5g0005071 RchiOBHm_Chr5g0005101 RchiOBHm_Chr5g0005111 RchiOBHm_Chr5g0005121 RchiOBHm_Chr5g0005131 RchiOBHm_Chr5g0005141 RchiOBHm_Chr5g0005161 RchiOBHm_Chr5g0005171 RchiOBHm_Chr5g0006341 RchiOBHm_Chr5g0046161 RchiOBHm_Chr5g0046171 RchiOBHm_Chr5g0046181 RchiOBHm_Chr5g0046221 RchiOBHm_Chr5g0046231 RchiOBHm_Chr7g0224061 RchiOBHm_Chr7g0224081 RchiOBHm_Chr7g0224101 RchiOBHm_Chr7g0224111 RchiOBHm_Chr7g0224121
rosa_laevigata RLG00000010193 RLG00000019146 RLG00000019148 RLG00000019149 RLG00000019150 RLG00000023750 RLG00000023751 RLG00000023753 RLG00000029486 RLG00000031068 RLG00000031069 RLG00000031284 RLG00000031285 RLG00000031286 RLG00000031289 RLG00000031290 RLG00000031291 RLG00000031292 RLG00000031293 RLG00000031294 RLG00000031295 RLG00000031296 RLG00000031297 RLG00000031363 RLG00000032618 RLG00000032619
rosa_multiflora Rmu_co8147584.1_g000001 Rmu_co8205828.1_g000001 Rmu_co8373645.1_g000001 Rmu_co8407679.1_g000001 Rmu_co8452561.1_g000001 Rmu_sc0001035.1_g000076 Rmu_sc0001884.1_g000026 Rmu_sc0001884.1_g000027 Rmu_sc0001884.1_g000035 Rmu_sc0002157.1_g000026 Rmu_sc0002399.1_g000006 Rmu_sc0002399.1_g000007 Rmu_sc0002883.1_g000010 Rmu_sc0003629.1_g000014 Rmu_sc0003884.1_g000004 Rmu_sc0007865.1_g000005 Rmu_sc0008085.1_g000013 Rmu_sc0008085.1_g000014 Rmu_sc0008085.1_g000016 Rmu_sc0008085.1_g000018 Rmu_sc0008432.1_g000004 Rmu_sc0008714.1_g000002 Rmu_sc0009296.1_g000008 Rmu_sc0009296.1_g000009 Rmu_sc0009296.1_g000011 Rmu_sc0010281.1_g000001 Rmu_sc0010281.1_g000002 Rmu_sc0010714.1_g000011 Rmu_sc0010714.1_g000016 Rmu_sc0011169.1_g000001 Rmu_sc0011169.1_g000007 Rmu_sc0013603.1_g000006 Rmu_sc0020478.1_g000003 Rmu_sc0020478.1_g000007 Rmu_sc0025106.1_g000012 Rmu_sc0032709.1_g000001 Rmu_sc0033028.1_g000001
rosa_roxburghii Rroxscaffold_1G00069570 Rroxscaffold_1G00069610 Rroxscaffold_1G00069620 Rroxscaffold_1G00070480 Rroxscaffold_1G00070490 Rroxscaffold_1G00070500 Rroxscaffold_1G00070510 Rroxscaffold_1G00070520 Rroxscaffold_1G00070530 Rroxscaffold_1G00070540 Rroxscaffold_1G00070550 Rroxscaffold_1G00070590 Rroxscaffold_1G00072950 Rroxscaffold_1G00073080 Rroxscaffold_2G00111810 Rroxscaffold_2G00111820 Rroxscaffold_2G00113530 Rroxscaffold_2G00113870 Rroxscaffold_6G00405010 Rroxscaffold_6G00405020 Rroxscaffold_6G00423590 Rroxscaffold_6G00424100
rosa_rugosa Rorug02G0293200 Rorug02G0293300 Rorug02G0293400 Rorug02G0305900 Rorug02G0305900 Rorug03G0009100 Rorug03G0157000 Rorug03G0157000 Rorug03G0304900 Rorug04G0400500 Rorug04G0415200 Rorug04G0415300 Rorug04G0415400 Rorug04G0415500 Rorug04G0421100 Rorug05G0068000 Rorug05G0068100 Rorug05G0068200 Rorug05G0068500 Rorug05G0224600 Rorug05G0224700
rosa_samantha Rh2CG331700 Rh2CG341600 Rh2CG341700 Rh2DG381200 Rh3DG071200 Rh3DG233400 Rh3DG233500 Rh3DG233600 Rh5AG043100 Rh5CG026000 Rh5CG047700 Rh5CG047800 Rh5CG047900 Rh5CG048000 Rh5CG048100 Rh5CG048300 Rh5CG056500 Rh5CG340500 Rh5CG340700 Rh5CG340800 Rh7AG365000
rosa_wichuraiana Rw0G002360 Rw0G002370 Rw0G012520 Rw0G018230 Rw0G019190 Rw2G027480 Rw2G029150 Rw3G005520 Rw3G005880 Rw3G005890 Rw3G018840 Rw3G018850 Rw3G018870 Rw3G018880 Rw3G020740 Rw5G002190 Rw5G004180 Rw5G004190 Rw5G004890 Rw5G013960 Rw5G014000 Rw5G028610 Rw7G030910 Rw7G030920

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 66
AciI CCGC 2 cut(s) 160, 396
AclWI GGATC 1 cut(s) 380
AcsI RAATTY 1 cut(s) 171
AcuI CTGAAG 2 cut(s) 121, 352
AfiI CCNNNNNNNGG 1 cut(s) 66
AflII CTTAAG 1 cut(s) 523
AflIII ACRYGT 1 cut(s) 298
AgsI TTSAA 7 cut(s) 125, 334, 344, 536, 567, 627, 705
AluBI AGCT 6 cut(s) 14, 156, 366, 473, 479, 590
AluI AGCT 6 cut(s) 14, 156, 366, 473, 479, 590
AlwI GGATC 1 cut(s) 380
AlwNI CAGNNNCTG 1 cut(s) 593
AoxI GGCC 1 cut(s) 575
ApeKI GCWGC 2 cut(s) 590, 637
ApoI RAATTY 1 cut(s) 171
ArsI GACNNNNNNTTYG 2 cut(s) 66, 98
AsuHPI GGTGA 4 cut(s) 104, 305, 473, 623
BanII GRGCYC 1 cut(s) 546
BbsI GAAGAC 1 cut(s) 471
BbvI GCAGC 2 cut(s) 577, 649
BccI CCATC 3 cut(s) 83, 245, 688
BfaI CTAG 2 cut(s) 153, 497
BfrI CTTAAG 1 cut(s) 523
BisI GCNGC 3 cut(s) 397, 591, 638
BlsI GCNGC 3 cut(s) 398, 592, 639
BmsI GCATC 2 cut(s) 518, 626
BpiI GAAGAC 1 cut(s) 471
Bpu10I CCTNAGC 1 cut(s) 633
BsaJI CCNNGG 1 cut(s) 51
Bsc4I CCNNNNNNNGG 1 cut(s) 66
Bse1I ACTGG 1 cut(s) 578
BseDI CCNNGG 1 cut(s) 51
BseGI GGATG 4 cut(s) 24, 361, 680, 739
BseLI CCNNNNNNNGG 1 cut(s) 66
BseNI ACTGG 1 cut(s) 578
BseXI GCAGC 2 cut(s) 577, 649
BshFI GGCC 1 cut(s) 577
BslI CCNNNNNNNGG 1 cut(s) 66
BsmI GAATGC 1 cut(s) 531
BsnI GGCC 1 cut(s) 577
Bsp1286I GDGCHC 1 cut(s) 546
Bsp143I GATC 3 cut(s) 372, 387, 427
BspACI CCGC 2 cut(s) 160, 396
BspANI GGCC 1 cut(s) 577
BspHI TCATGA 1 cut(s) 375
BspPI GGATC 1 cut(s) 380
BspQI GCTCTTC 1 cut(s) 69
BspTI CTTAAG 1 cut(s) 523
BsrI ACTGG 1 cut(s) 578
BssECI CCNNGG 1 cut(s) 51
BssMI GATC 3 cut(s) 372, 387, 427
BssT1I CCWWGG 1 cut(s) 51
Bst4CI ACNGT 2 cut(s) 208, 662
Bst6I CTCTTC 1 cut(s) 69
BstAFI CTTAAG 1 cut(s) 523
BstC8I GCNNGC 2 cut(s) 642, 667
BstDEI CTNAG 2 cut(s) 143, 633
BstEII GGTNACC 1 cut(s) 92
BstF5I GGATG 4 cut(s) 24, 361, 680, 739
BstKTI GATC 3 cut(s) 375, 390, 430
BstMBI GATC 3 cut(s) 372, 387, 427
BstNSI RCATGY 2 cut(s) 302, 669
BstPI GGTNACC 1 cut(s) 92
BstV1I GCAGC 2 cut(s) 577, 649
BstV2I GAAGAC 1 cut(s) 471
BsuRI GGCC 1 cut(s) 577
BtsCI GGATG 4 cut(s) 24, 361, 680, 739
BtsIMutI CAGTG 2 cut(s) 213, 667
Cac8I GCNNGC 2 cut(s) 642, 667
CaiI CAGNNNCTG 1 cut(s) 593
CciI TCATGA 1 cut(s) 375
CviAII CATG 8 cut(s) 66, 184, 299, 376, 436, 583, 601, 666
DdeI CTNAG 2 cut(s) 143, 633
DpnI GATC 3 cut(s) 374, 389, 429
DpnII GATC 3 cut(s) 372, 387, 427
Eam1104I CTCTTC 1 cut(s) 69
EarI CTCTTC 1 cut(s) 69
Eco130I CCWWGG 1 cut(s) 51
Eco24I GRGCYC 1 cut(s) 546
Eco32I GATATC 1 cut(s) 195
Eco57I CTGAAG 2 cut(s) 121, 352
Eco91I GGTNACC 1 cut(s) 92
EcoO65I GGTNACC 1 cut(s) 92
EcoRV GATATC 1 cut(s) 195
EcoT14I CCWWGG 1 cut(s) 51
EcoT22I ATGCAT 1 cut(s) 533
EcoT38I GRGCYC 1 cut(s) 546
ErhI CCWWGG 1 cut(s) 51
FaeI CATG 8 cut(s) 69, 187, 302, 379, 439, 586, 604, 669
FalI AAGNNNNNCTT 3 cut(s) 35, 606, 638
FatI CATG 8 cut(s) 65, 183, 298, 375, 435, 582, 600, 665
Fnu4HI GCNGC 3 cut(s) 397, 591, 638
FokI GGATG 3 cut(s) 11, 368, 667
FriOI GRGCYC 1 cut(s) 546
Fsp4HI GCNGC 3 cut(s) 397, 591, 638
FspBI CTAG 2 cut(s) 153, 497
GluI GCNGC 3 cut(s) 397, 591, 638
HaeIII GGCC 1 cut(s) 577
Hin1II CATG 8 cut(s) 69, 187, 302, 379, 439, 586, 604, 669
HinfI GANTC 2 cut(s) 488, 563
HphI GGTGA 4 cut(s) 104, 305, 473, 623
Hpy188I TCNGA 1 cut(s) 199
Hpy188III TCNNGA 5 cut(s) 252, 370, 376, 422, 485
HpyCH4III ACNGT 2 cut(s) 208, 662
HpyCH4V TGCA 7 cut(s) 45, 325, 531, 556, 644, 665, 669
HpyF3I CTNAG 2 cut(s) 143, 633
Hsp92II CATG 8 cut(s) 69, 187, 302, 379, 439, 586, 604, 669
Kzo9I GATC 3 cut(s) 372, 387, 427
LguI GCTCTTC 1 cut(s) 69
Lsp1109I GCAGC 2 cut(s) 577, 649
LweI GCATC 2 cut(s) 518, 626
MaeI CTAG 2 cut(s) 153, 497
MaeIII GTNAC 3 cut(s) 3, 92, 311
MalI GATC 3 cut(s) 374, 389, 429
MboI GATC 3 cut(s) 372, 387, 427
MboII GAAGA 5 cut(s) 86, 127, 437, 476, 572
MhlI GDGCHC 1 cut(s) 546
MluCI AATT 2 cut(s) 125, 171
MmeI TCCRAC 4 cut(s) 61, 148, 273, 333
MnlI CCTC 2 cut(s) 38, 502
Mph1103I ATGCAT 1 cut(s) 533
MseI TTAA 2 cut(s) 524, 716
MspA1I CMGCKG 1 cut(s) 590
MspCI CTTAAG 1 cut(s) 523
Mva1269I GAATGC 1 cut(s) 531
NdeII GATC 3 cut(s) 372, 387, 427
NlaIII CATG 8 cut(s) 69, 187, 302, 379, 439, 586, 604, 669
NmuCI GTSAC 2 cut(s) 92, 311
NsiI ATGCAT 1 cut(s) 533
NspI RCATGY 2 cut(s) 302, 669
PaeI GCATGC 1 cut(s) 669
PagI TCATGA 1 cut(s) 375
PciI ACATGT 1 cut(s) 298
PciSI GCTCTTC 1 cut(s) 69
PctI GAATGC 1 cut(s) 531
PfeI GAWTC 2 cut(s) 488, 563
PflMI CCANNNNNTGG 1 cut(s) 66
PkrI GCNGC 3 cut(s) 398, 592, 639
PscI ACATGT 1 cut(s) 298
PspEI GGTNACC 1 cut(s) 92
PstNI CAGNNNCTG 1 cut(s) 593
PvuII CAGCTG 1 cut(s) 590
SapI GCTCTTC 1 cut(s) 69
SaqAI TTAA 2 cut(s) 524, 716
SatI GCNGC 3 cut(s) 397, 591, 638
Sau3AI GATC 3 cut(s) 372, 387, 427
SduI GDGCHC 1 cut(s) 546
SetI ASST 7 cut(s) 16, 99, 158, 368, 475, 481, 592
SfaNI GCATC 2 cut(s) 518, 626
SmlI CTYRAG 1 cut(s) 523
SmoI CTYRAG 1 cut(s) 523
SphI GCATGC 1 cut(s) 669
Sse9I AATT 2 cut(s) 125, 171
SsiI CCGC 2 cut(s) 160, 396
SspMI CTAG 2 cut(s) 153, 497
StyI CCWWGG 1 cut(s) 51
TaaI ACNGT 2 cut(s) 208, 662
TaqI TCGA 1 cut(s) 739
TasI AATT 2 cut(s) 125, 171
TauI GCSGC 1 cut(s) 399
TfiI GAWTC 2 cut(s) 488, 563
Tru1I TTAA 2 cut(s) 524, 716
Tru9I TTAA 2 cut(s) 524, 716
TscAI CASTG 2 cut(s) 213, 667
TseFI GTSAC 2 cut(s) 92, 311
TseI GCWGC 2 cut(s) 590, 637
Tsp45I GTSAC 2 cut(s) 92, 311
TspDTI ATGAA 3 cut(s) 452, 531, 589
TspRI CASTG 2 cut(s) 213, 667
Van91I CCANNNNNTGG 1 cut(s) 66
Vha464I CTTAAG 1 cut(s) 523
XapI RAATTY 1 cut(s) 171
XceI RCATGY 2 cut(s) 302, 669
XspI CTAG 2 cut(s) 153, 497
Zsp2I ATGCAT 1 cut(s) 533
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.