Rroxscaffold_6G00424100

serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000006
OG0000112
Physical Location & Seq
Reverse (-)
45320643 .. 45323225
2583 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_6G00424100.1

Sequence Viewer

Length: 1824 bp
ATGCCACTGTTTCACACCTACAAAGTTGCTAATGCGCAGAAAATGTTATTCAAAGCTCTGCTTCTCTTCCTCCTCTTCCGATTTTGCGAATCCAGGGACACCATAACATGGAACCAAGAACAACTGAAGGATGATGGTGGAGTTTTAGTGTCCAAACAGAGCAAGTTCGAATTGGGTTTCTTCAGCCCCGGAAATTCTAGCTACCGGTATGTCGGAATTTGGTATCCTCAGACTGAAGTATCTAATAAAACAGTGGTGTGGGTTGCAAACAGGAACAATCCCATCAATGATACCTCTGGTGTGCTCACAATAAACAGGTATGGAGAACTAGTCCTTTATGCTTATAAAATGGAGAGCACTCCTATTTGGTCTACTAATGTGTCGCGGTCGATTCAAAATGTTAACACAACCACTTTATCTGCACAGCTTTTAGATACAGGAAATCTAGTTGTGTTCCAGGATGATAATAATGAAATCTCTATATGGCAAAGTTTTGATCATCCTACAGATACTTTAATTCGAGGTATGAAAGTTGGGGTGAACTGGAAAACTGGGCTAGAATGGGTTTTAACATCTTGGAAGTCACAAGATGACCCTGGAACTGGGGACTATACCCTTAGGCTCTATCCAAATCAGATTGCATCCCCCAATTTTTTATGTACAAGGGGTCGAAACGCCTTACATGGGATGATGGTGGTCTTCAATGGGAGGAAGACTTCTCTGCACCGAAGTCCCGGTGTGACTGGGTATGTGCCTAATTCTATTAGTGATTGGAATCATAAAAATGGGACACGTGGATGTGTGAGTAATCGACTTGGTTTGTTGAAGTGTGGAGATGGAGACGGGTTTGTGAAGGTGGCAAGAGTTAAATATCCTGACACATCGATGGGAGCATTGTTAAAATCAGGTATGAGTGCCAAAGAGTGTGAGCAGGAGTGCCTAAGAAATTGTTCTTGCACCGCATATTTGAGCACAGAATATGAAGGGCTTGTTGATTGCTTGACATGGTTTGATGACTTGATGGACATTTTAGTGTACACAGAGCTTGGACAAGATCTCTACGTTCGTGTGAATGCAACCGTGTTAGCTGCAAATGCCAGAAGATCAGAAGGTTTCTTGGAAAGGAGGGGAATGCTGGCTATTCCAATACCGTCTGCTGTGCTAGCATTGGTACTAATCATTATGCTTGCACGTTGGTGGGGTAAGAAGAACAGGAACACAAAAGGCATAGACTTTGTGGAGGCAGACGAGCTTCTGGAAAACCAGAGAAACCCTGAATTGCAATTTTTCGATCTTGACACAATAATAGCAGCCACAGACCACTTCTCTCGTGTCAATGAACTTGGCCATGGTGGTTTTGGCTCTGTTTATAAGGGTCAGCTACCAAATGAAGAGAAAGTTGCTGTGAAAAGATTGTCCCAAACTTCAGGACAAGGGATCGAAGAATTCAAAAATGAAGTTGCAGTTATAGCAAGACTTCAACACAGGAATCTTGTGAAACTTTTAGGCTGTTGTATAAAGGGAGAAGAAAGGATGTTAGTGCTAGAATACATGCCTAACAAAAGCTTGAACTCCTTTCTTTTCGATAACACAAGACGGTCCATCTTGGATTGGGAAAAGCGCTTTGAAATAATCAACGGGATTGCTCGTGGGATTTTGTATCTTCACCAAGACTCAAGATTGAGGATCATCCATAGAGATCTGAAAACTAGCAATATTCTTCTAGATACGAAGATGAACCCAAAAATTTCTGATTTTGGCATGGCTAGAATATTCCACGGAGATCAACCGCAAGATAAGACGAGCCGTATTGTTGGAACATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
B_lectin DUF3403 PAN_2 Pkinase Pkinase_Tyr S_locus_glycop

Protein Analysis

607

Amino Acids

68.74

Weight (kDa)

8.6

Isoelectric Point (pI)

36.7

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 84 - 194 1.2e-34 D-mannose binding lectin
PAN_2 PF08276 277 - 343 3.6e-18 PAN-like domain
Pkinase PF00069 443 - 605 3.7e-34 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 445 - 598 5.5e-36 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000112)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g03320 FvH4_3g03322 FvH4_3g03323 FvH4_3g03340 FvH4_3g03350 FvH4_3g03351 FvH4_3g03370 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g06140 FvH4_6g00257 FvH4_6g00257 FvH4_6g00270 FvH4_6g00300 FvH4_6g20800 FvH4_6g20800 FvH4_6g20800 FvH4_6g20800 FvH4_6g20800
malus_domestica MD05G1232700.v1.1 MD05G1327700.v1.1 MD05G1327800.v1.1 MD05G1327900.v1.1 MD05G1328000.v1.1 MD05G1328200.v1.1 MD05G1328300.v1.1 MD05G1328500.v1.1 MD05G1332000.v1.1 MD05G1332100.v1.1 MD10G1307600.v1.1 MD10G1307800.v1.1
prunus_persica Prupe.4G031900_v2.0.a1 Prupe.4G032000_v2.0.a1 Prupe.4G032000_v2.0.a1 Prupe.4G032100_v2.0.a1 Prupe.4G032200_v2.0.a1 Prupe.4G032200_v2.0.a1 Prupe.4G032200_v2.0.a1
pyrus_communis pycom05g30180 pycom05g30190 pycom05g30200 pycom05g30210 pycom10g25920 pycom10g25930
rosa_chinensis RchiOBHm_Chr2g0130831 RchiOBHm_Chr2g0132531 RchiOBHm_Chr2g0132541 RchiOBHm_Chr3g0455681 RchiOBHm_Chr3g0476681 RchiOBHm_Chr3g0476761 RchiOBHm_Chr3g0476771 RchiOBHm_Chr3g0476791 RchiOBHm_Chr3g0476801 RchiOBHm_Chr3g0476811 RchiOBHm_Chr4g0413551 RchiOBHm_Chr4g0413561 RchiOBHm_Chr5g0002911 RchiOBHm_Chr5g0005071 RchiOBHm_Chr5g0005101 RchiOBHm_Chr5g0005111 RchiOBHm_Chr5g0005121 RchiOBHm_Chr5g0005131 RchiOBHm_Chr5g0005141 RchiOBHm_Chr5g0005161 RchiOBHm_Chr5g0005171 RchiOBHm_Chr5g0006341 RchiOBHm_Chr5g0046161 RchiOBHm_Chr5g0046171 RchiOBHm_Chr5g0046181 RchiOBHm_Chr5g0046221 RchiOBHm_Chr5g0046231 RchiOBHm_Chr7g0224061 RchiOBHm_Chr7g0224081 RchiOBHm_Chr7g0224101 RchiOBHm_Chr7g0224111 RchiOBHm_Chr7g0224121
rosa_laevigata RLG00000010193 RLG00000019146 RLG00000019148 RLG00000019149 RLG00000019150 RLG00000023750 RLG00000023751 RLG00000023753 RLG00000029486 RLG00000031068 RLG00000031069 RLG00000031284 RLG00000031285 RLG00000031286 RLG00000031289 RLG00000031290 RLG00000031291 RLG00000031292 RLG00000031293 RLG00000031294 RLG00000031295 RLG00000031296 RLG00000031297 RLG00000031363 RLG00000032618 RLG00000032619
rosa_multiflora Rmu_co8147584.1_g000001 Rmu_co8205828.1_g000001 Rmu_co8373645.1_g000001 Rmu_co8407679.1_g000001 Rmu_co8452561.1_g000001 Rmu_sc0001035.1_g000076 Rmu_sc0001884.1_g000026 Rmu_sc0001884.1_g000027 Rmu_sc0001884.1_g000035 Rmu_sc0002157.1_g000026 Rmu_sc0002399.1_g000006 Rmu_sc0002399.1_g000007 Rmu_sc0002883.1_g000010 Rmu_sc0003629.1_g000014 Rmu_sc0003884.1_g000004 Rmu_sc0007865.1_g000005 Rmu_sc0008085.1_g000013 Rmu_sc0008085.1_g000014 Rmu_sc0008085.1_g000016 Rmu_sc0008085.1_g000018 Rmu_sc0008432.1_g000004 Rmu_sc0008714.1_g000002 Rmu_sc0009296.1_g000008 Rmu_sc0009296.1_g000009 Rmu_sc0009296.1_g000011 Rmu_sc0010281.1_g000001 Rmu_sc0010281.1_g000002 Rmu_sc0010714.1_g000011 Rmu_sc0010714.1_g000016 Rmu_sc0011169.1_g000001 Rmu_sc0011169.1_g000007 Rmu_sc0013603.1_g000006 Rmu_sc0020478.1_g000003 Rmu_sc0020478.1_g000007 Rmu_sc0025106.1_g000012 Rmu_sc0032709.1_g000001 Rmu_sc0033028.1_g000001
rosa_roxburghii Rroxscaffold_1G00069570 Rroxscaffold_1G00069610 Rroxscaffold_1G00069620 Rroxscaffold_1G00070480 Rroxscaffold_1G00070490 Rroxscaffold_1G00070500 Rroxscaffold_1G00070510 Rroxscaffold_1G00070520 Rroxscaffold_1G00070530 Rroxscaffold_1G00070540 Rroxscaffold_1G00070550 Rroxscaffold_1G00070590 Rroxscaffold_1G00072950 Rroxscaffold_1G00073080 Rroxscaffold_2G00111810 Rroxscaffold_2G00111820 Rroxscaffold_2G00113530 Rroxscaffold_2G00113870 Rroxscaffold_6G00405010 Rroxscaffold_6G00405020 Rroxscaffold_6G00423590 Rroxscaffold_6G00424100
rosa_rugosa Rorug02G0293200 Rorug02G0293300 Rorug02G0293400 Rorug02G0305900 Rorug02G0305900 Rorug03G0009100 Rorug03G0157000 Rorug03G0157000 Rorug03G0304900 Rorug04G0400500 Rorug04G0415200 Rorug04G0415300 Rorug04G0415400 Rorug04G0415500 Rorug04G0421100 Rorug05G0068000 Rorug05G0068100 Rorug05G0068200 Rorug05G0068500 Rorug05G0224600 Rorug05G0224700
rosa_samantha Rh2CG331700 Rh2CG341600 Rh2CG341700 Rh2DG381200 Rh3DG071200 Rh3DG233400 Rh3DG233500 Rh3DG233600 Rh5AG043100 Rh5CG026000 Rh5CG047700 Rh5CG047800 Rh5CG047900 Rh5CG048000 Rh5CG048100 Rh5CG048300 Rh5CG056500 Rh5CG340500 Rh5CG340700 Rh5CG340800 Rh7AG365000
rosa_wichuraiana Rw0G002360 Rw0G002370 Rw0G012520 Rw0G018230 Rw0G019190 Rw2G027480 Rw2G029150 Rw3G005520 Rw3G005880 Rw3G005890 Rw3G018840 Rw3G018850 Rw3G018870 Rw3G018880 Rw3G020740 Rw5G002190 Rw5G004180 Rw5G004190 Rw5G004890 Rw5G013960 Rw5G014000 Rw5G028610 Rw7G030910 Rw7G030920

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 345, 1371
Acc16I TGCGCA 1 cut(s) 36
AccB7I CCANNNNNTGG 1 cut(s) 108
AccI GTMKAC 1 cut(s) 371
AccII CGCG 1 cut(s) 385
AciI CCGC 3 cut(s) 385, 960, 1790
AclWI GGATC 2 cut(s) 1445, 1694
AcoI YGGCCR 1 cut(s) 1345
AcsI RAATTY 4 cut(s) 193, 216, 1445, 1746
AcuI CTGAAG 4 cut(s) 146, 166, 255, 1410
AcvI CACGTG 1 cut(s) 794
AfaI GTAC 3 cut(s) 661, 1037, 1173
AfeI AGCGCT 1 cut(s) 1622
AfiI CCNNNNNNNGG 3 cut(s) 108, 602, 684
AflIII ACRYGT 1 cut(s) 791
AgeI ACCGGT 1 cut(s) 204
AgsI TTSAA 8 cut(s) 52, 395, 703, 826, 1450, 1481, 1570, 1628
AhlI ACTAGT 1 cut(s) 328
AjnI CCWGG 3 cut(s) 92, 456, 595
AleI CACNNNNGTG 1 cut(s) 1195
AluBI AGCT 8 cut(s) 56, 201, 427, 1045, 1088, 1252, 1381, 1566
AluI AGCT 8 cut(s) 56, 201, 427, 1045, 1088, 1252, 1381, 1566
Alw21I GWGCWC 3 cut(s) 306, 359, 974
Alw26I GTCTC 1 cut(s) 834
AlwI GGATC 2 cut(s) 1445, 1694
Aor51HI AGCGCT 1 cut(s) 1622
AoxI GGCC 1 cut(s) 1345
ApeKI GCWGC 2 cut(s) 1088, 1310
ApoI RAATTY 4 cut(s) 193, 216, 1445, 1746
AsiGI ACCGGT 1 cut(s) 204
Asp700I GAANNNNTTC 1 cut(s) 949
AspLEI GCGC 2 cut(s) 37, 1623
AspS9I GGNCC 1 cut(s) 1599
AsuC2I CCSGG 2 cut(s) 189, 735
AsuHPI GGTGA 2 cut(s) 550, 1658
AsuII TTCGAA 1 cut(s) 168
AsuNHI GCTAGC 1 cut(s) 1162
AvaII GGWCC 1 cut(s) 1599
AxyI CCTNAGG 1 cut(s) 617
BaeI ACNNNNGTAYC 2 cut(s) 222, 255
BalI TGGCCA 1 cut(s) 1347
BauI CACGAG 2 cut(s) 1329, 1647
BbrPI CACGTG 1 cut(s) 794
BbsI GAAGAC 2 cut(s) 691, 719
Bbv12I GWGCWC 3 cut(s) 306, 359, 974
BbvI GCAGC 2 cut(s) 1075, 1322
BccI CCATC 7 cut(s) 128, 290, 685, 830, 880, 1015, 1610
BceAI ACGGC 1 cut(s) 1791
BciT130I CCWGG 3 cut(s) 94, 458, 597
BciVI GTATCC 1 cut(s) 234
BclI TGATCA 1 cut(s) 496
BcnI CCSGG 2 cut(s) 189, 735
BcoDI GTCTC 1 cut(s) 834
BcuI ACTAGT 1 cut(s) 328
BfaI CTAG 9 cut(s) 198, 329, 446, 557, 1163, 1544, 1710, 1724, 1767
BfmI CTRYAG 1 cut(s) 504
BfoI RGCGCY 1 cut(s) 1624
BfuI GTATCC 1 cut(s) 234
BglII AGATCT 2 cut(s) 1054, 1699
BisI GCNGC 2 cut(s) 1089, 1311
BlsI GCNGC 2 cut(s) 1090, 1312
Bme1390I CCNGG 5 cut(s) 94, 189, 458, 597, 735
Bme18I GGWCC 1 cut(s) 1599
BmgT120I GGNCC 1 cut(s) 1599
BmiI GGNNCC 1 cut(s) 113
BmrFI CCNGG 5 cut(s) 94, 189, 458, 597, 735
BmrI ACTGGG 3 cut(s) 561, 612, 753
BmsI GCATC 1 cut(s) 650
BmtI GCTAGC 1 cut(s) 1166
BmuI ACTGGG 3 cut(s) 561, 612, 753
BpiI GAAGAC 2 cut(s) 691, 719
Bpu14I TTCGAA 1 cut(s) 168
BpuEI CTTGAG 1 cut(s) 1660
BpuMI CCSGG 2 cut(s) 189, 735
Bsa29I ATCGAT 1 cut(s) 884
BsaAI YACGTR 1 cut(s) 794
BsaBI GATNNNNATC 1 cut(s) 774
BsaJI CCNNGG 5 cut(s) 93, 187, 595, 1348, 1777
BsaWI WCCGGW 1 cut(s) 204
BsaXI ACNNNNNCTCC 4 cut(s) 132, 162, 315, 345
Bsc4I CCNNNNNNNGG 3 cut(s) 108, 602, 684
Bse118I RCCGGY 1 cut(s) 204
Bse1I ACTGG 4 cut(s) 548, 556, 607, 748
Bse21I CCTNAGG 1 cut(s) 617
Bse8I GATNNNNATC 1 cut(s) 774
BseBI CCWGG 3 cut(s) 94, 458, 597
BseCI ATCGAT 1 cut(s) 884
BseDI CCNNGG 5 cut(s) 93, 187, 595, 1348, 1777
BseGI GGATG 8 cut(s) 136, 466, 499, 641, 693, 803, 1539, 1689
BseJI GATNNNNATC 1 cut(s) 774
BseLI CCNNNNNNNGG 3 cut(s) 108, 602, 684
BseMII CTCAG 1 cut(s) 242
BseNI ACTGG 4 cut(s) 548, 556, 607, 748
BseRI GAGGAG 1 cut(s) 62
BseXI GCAGC 2 cut(s) 1075, 1322
BsgI GTGCAG 2 cut(s) 405, 707
Bsh1236I CGCG 1 cut(s) 385
Bsh1285I CGRYCG 1 cut(s) 389
BshFI GGCC 1 cut(s) 1347
BshTI ACCGGT 1 cut(s) 204
BshVI ATCGAT 1 cut(s) 884
BsiEI CGRYCG 1 cut(s) 389
BsiHKAI GWGCWC 3 cut(s) 306, 359, 974
BsiSI CCGG 3 cut(s) 189, 205, 735
BslFI GGGAC 5 cut(s) 110, 620, 717, 802, 1402
BslI CCNNNNNNNGG 3 cut(s) 108, 602, 684
BsmAI GTCTC 1 cut(s) 834
BsmBI CGTCTC 1 cut(s) 834
BsmFI GGGAC 5 cut(s) 110, 620, 717, 802, 1402
BsmI GAATGC 2 cut(s) 1078, 1137
BsnI GGCC 1 cut(s) 1347
Bsp119I TTCGAA 1 cut(s) 168
Bsp1286I GDGCHC 3 cut(s) 306, 359, 974
Bsp1407I TGTACA 2 cut(s) 659, 1035
Bsp143I GATC 8 cut(s) 496, 1054, 1103, 1291, 1437, 1686, 1699, 1783
Bsp19I CCATGG 1 cut(s) 1348
BspACI CCGC 3 cut(s) 385, 960, 1790
BspANI GGCC 1 cut(s) 1347
BspCNI CTCAG 1 cut(s) 241
BspDI ATCGAT 1 cut(s) 884
BspFNI CGCG 1 cut(s) 385
BspLI GGNNCC 1 cut(s) 113
BspOI GCTAGC 1 cut(s) 1166
BspPI GGATC 2 cut(s) 1445, 1694
BspT104I TTCGAA 1 cut(s) 168
BsrFI RCCGGY 1 cut(s) 204
BsrGI TGTACA 2 cut(s) 659, 1035
BsrI ACTGG 4 cut(s) 548, 556, 607, 748
BssAI RCCGGY 1 cut(s) 204
BssECI CCNNGG 5 cut(s) 93, 187, 595, 1348, 1777
BssMI GATC 8 cut(s) 496, 1054, 1103, 1291, 1437, 1686, 1699, 1783
BssSI CACGAG 2 cut(s) 1329, 1647
BssT1I CCWWGG 1 cut(s) 1348
Bst2BI CACGAG 2 cut(s) 1329, 1647
Bst2UI CCWGG 3 cut(s) 94, 458, 597
Bst4CI ACNGT 5 cut(s) 9, 253, 1081, 1152, 1599
Bst6I CTCTTC 3 cut(s) 71, 80, 1386
BstAUI TGTACA 2 cut(s) 659, 1035
BstBAI YACGTR 1 cut(s) 794
BstBI TTCGAA 1 cut(s) 168
BstC8I GCNNGC 3 cut(s) 1137, 1164, 1188
BstDEI CTNAG 3 cut(s) 228, 617, 941
BstDSI CCRYGG 2 cut(s) 1348, 1777
BstF5I GGATG 8 cut(s) 136, 466, 499, 641, 693, 803, 1539, 1689
BstFNI CGCG 1 cut(s) 385
BstH2I RGCGCY 1 cut(s) 1624
BstHHI GCGC 2 cut(s) 37, 1623
BstKTI GATC 8 cut(s) 499, 1057, 1106, 1294, 1440, 1689, 1702, 1786
BstMAI GTCTC 1 cut(s) 834
BstMBI GATC 8 cut(s) 496, 1054, 1103, 1291, 1437, 1686, 1699, 1783
BstMCI CGRYCG 1 cut(s) 389
BstMWI GCNNNNNNNGC 3 cut(s) 1094, 1163, 1469
BstNI CCWGG 3 cut(s) 94, 458, 597
BstNSI RCATGY 1 cut(s) 1555
BstSCI CCNGG 5 cut(s) 92, 187, 456, 595, 733
BstSFI CTRYAG 1 cut(s) 504
BstUI CGCG 1 cut(s) 385
BstV1I GCAGC 2 cut(s) 1075, 1322
BstV2I GAAGAC 2 cut(s) 691, 719
BstX2I RGATCY 2 cut(s) 1054, 1699
BstYI RGATCY 2 cut(s) 1054, 1699
Bsu15I ATCGAT 1 cut(s) 884
Bsu36I CCTNAGG 1 cut(s) 617
BsuI GTATCC 1 cut(s) 234
BsuRI GGCC 1 cut(s) 1347
BsuTUI ATCGAT 1 cut(s) 884
BtgI CCRYGG 2 cut(s) 1348, 1777
BtsCI GGATG 8 cut(s) 136, 466, 499, 641, 693, 803, 1539, 1689
BtsIMutI CAGTG 2 cut(s) 5, 258
Cac8I GCNNGC 3 cut(s) 1137, 1164, 1188
CfoI GCGC 2 cut(s) 37, 1623
Cfr10I RCCGGY 1 cut(s) 204
Cfr13I GGNCC 1 cut(s) 1599
ClaI ATCGAT 1 cut(s) 884
Csp6I GTAC 3 cut(s) 660, 1036, 1172
CspAI ACCGGT 1 cut(s) 204
CviAII CATG 6 cut(s) 108, 683, 1005, 1349, 1552, 1762
CviQI GTAC 3 cut(s) 660, 1036, 1172
DdeI CTNAG 3 cut(s) 228, 617, 941
DpnI GATC 8 cut(s) 498, 1056, 1105, 1293, 1439, 1688, 1701, 1785
DpnII GATC 8 cut(s) 496, 1054, 1103, 1291, 1437, 1686, 1699, 1783
EaeI YGGCCR 1 cut(s) 1345
Eam1104I CTCTTC 3 cut(s) 71, 80, 1386
EarI CTCTTC 3 cut(s) 71, 80, 1386
Eco130I CCWWGG 1 cut(s) 1348
Eco47I GGWCC 1 cut(s) 1599
Eco47III AGCGCT 1 cut(s) 1622
Eco57I CTGAAG 4 cut(s) 146, 166, 255, 1410
Eco72I CACGTG 1 cut(s) 794
Eco81I CCTNAGG 1 cut(s) 617
EcoRI GAATTC 1 cut(s) 1445
EcoRII CCWGG 3 cut(s) 92, 456, 595
EcoT14I CCWWGG 1 cut(s) 1348
ErhI CCWWGG 1 cut(s) 1348
Esp3I CGTCTC 1 cut(s) 834
FaeI CATG 6 cut(s) 111, 686, 1008, 1352, 1555, 1765
FalI AAGNNNNNCTT 2 cut(s) 45, 77
FaqI GGGAC 5 cut(s) 110, 620, 717, 802, 1402
FatI CATG 6 cut(s) 107, 682, 1004, 1348, 1551, 1761
FbaI TGATCA 1 cut(s) 496
FblI GTMKAC 1 cut(s) 371
Fnu4HI GCNGC 2 cut(s) 1089, 1311
FokI GGATG 8 cut(s) 143, 473, 486, 628, 700, 810, 1546, 1676
Fsp4HI GCNGC 2 cut(s) 1089, 1311
FspBI CTAG 9 cut(s) 198, 329, 446, 557, 1163, 1544, 1710, 1724, 1767
FspI TGCGCA 1 cut(s) 36
GlaI GCGC 2 cut(s) 36, 1622
GluI GCNGC 2 cut(s) 1089, 1311
HaeII RGCGCY 1 cut(s) 1624
HaeIII GGCC 1 cut(s) 1347
HapII CCGG 3 cut(s) 189, 205, 735
HhaI GCGC 2 cut(s) 37, 1623
Hin1II CATG 6 cut(s) 111, 686, 1008, 1352, 1555, 1765
Hin6I GCGC 2 cut(s) 35, 1621
HinP1I GCGC 2 cut(s) 35, 1621
HincII GTYRAC 1 cut(s) 403
HindII GTYRAC 1 cut(s) 403
HindIII AAGCTT 1 cut(s) 1564
HinfI GANTC 5 cut(s) 89, 391, 775, 1489, 1673
HpaI GTTAAC 1 cut(s) 403
HpaII CCGG 3 cut(s) 189, 205, 735
HphI GGTGA 2 cut(s) 550, 1658
Hpy166II GTNNAC 5 cut(s) 372, 403, 541, 1036, 1038
Hpy188I TCNGA 7 cut(s) 80, 215, 231, 636, 1108, 1704, 1753
Hpy188III TCNNGA 6 cut(s) 875, 1256, 1295, 1428, 1677, 1724
Hpy8I GTNNAC 5 cut(s) 372, 403, 541, 1036, 1038
HpyAV CCTTC 4 cut(s) 121, 847, 977, 1103
HpyCH4III ACNGT 5 cut(s) 9, 253, 1081, 1152, 1599
HpyCH4IV ACGT 3 cut(s) 793, 1062, 1192
HpyF10VI GCNNNNNNNGC 3 cut(s) 1094, 1163, 1469
HpyF3I CTNAG 3 cut(s) 228, 617, 941
HpySE526I ACGT 3 cut(s) 793, 1062, 1192
Hsp92II CATG 6 cut(s) 111, 686, 1008, 1352, 1555, 1765
HspAI GCGC 2 cut(s) 35, 1621
Ksp22I TGATCA 1 cut(s) 496
KspAI GTTAAC 1 cut(s) 403
Kzo9I GATC 8 cut(s) 496, 1054, 1103, 1291, 1437, 1686, 1699, 1783
LmnI GCTCC 1 cut(s) 890
Lsp1109I GCAGC 2 cut(s) 1075, 1322
LweI GCATC 1 cut(s) 650
MaeI CTAG 9 cut(s) 198, 329, 446, 557, 1163, 1544, 1710, 1724, 1767
MaeII ACGT 3 cut(s) 793, 1062, 1192
MaeIII GTNAC 2 cut(s) 582, 739
MalI GATC 8 cut(s) 498, 1056, 1105, 1293, 1439, 1688, 1701, 1785
MboI GATC 8 cut(s) 496, 1054, 1103, 1291, 1437, 1686, 1699, 1783
MflI RGATCY 2 cut(s) 1054, 1699
MhlI GDGCHC 3 cut(s) 306, 359, 974
MlsI TGGCCA 1 cut(s) 1347
MluNI TGGCCA 1 cut(s) 1347
MlyI GAGTC 1 cut(s) 1667
MmeI TCCRAC 2 cut(s) 193, 1795
MnlI CCTC 9 cut(s) 80, 83, 237, 304, 515, 702, 1119, 1234, 1677
Mox20I TGGCCA 1 cut(s) 1347
MroXI GAANNNNTTC 1 cut(s) 949
MscI TGGCCA 1 cut(s) 1347
MseI TTAA 5 cut(s) 402, 515, 569, 867, 899
MslI CAYNNNNRTG 5 cut(s) 783, 796, 884, 1031, 1195
Msp20I TGGCCA 1 cut(s) 1347
MspI CCGG 3 cut(s) 189, 205, 735
MspR9I CCNGG 5 cut(s) 94, 189, 458, 597, 735
Mva1269I GAATGC 2 cut(s) 1078, 1137
MvaI CCWGG 3 cut(s) 94, 458, 597
MvnI CGCG 1 cut(s) 385
MwoI GCNNNNNNNGC 3 cut(s) 1094, 1163, 1469
NciI CCSGG 2 cut(s) 189, 735
NcoI CCATGG 1 cut(s) 1348
NdeII GATC 8 cut(s) 496, 1054, 1103, 1291, 1437, 1686, 1699, 1783
NheI GCTAGC 1 cut(s) 1162
NlaIII CATG 6 cut(s) 111, 686, 1008, 1352, 1555, 1765
NlaIV GGNNCC 1 cut(s) 113
NmuCI GTSAC 2 cut(s) 582, 739
NsbI TGCGCA 1 cut(s) 36
NspI RCATGY 1 cut(s) 1555
NspV TTCGAA 1 cut(s) 168
OliI CACNNNNGTG 1 cut(s) 1195
PctI GAATGC 2 cut(s) 1078, 1137
PdmI GAANNNNTTC 1 cut(s) 949
PfeI GAWTC 4 cut(s) 89, 391, 775, 1489
PflMI CCANNNNNTGG 1 cut(s) 108
PfoI TCCNGGA 1 cut(s) 456
PinAI ACCGGT 1 cut(s) 204
PkrI GCNGC 2 cut(s) 1090, 1312
PleI GAGTC 1 cut(s) 1667
PmaCI CACGTG 1 cut(s) 794
PmlI CACGTG 1 cut(s) 794
PpsI GAGTC 1 cut(s) 1667
Ppu21I YACGTR 1 cut(s) 794
PsiI TTATAA 2 cut(s) 345, 1371
Psp6I CCWGG 3 cut(s) 92, 456, 595
PspCI CACGTG 1 cut(s) 794
PspGI CCWGG 3 cut(s) 92, 456, 595
PspN4I GGNNCC 1 cut(s) 113
PspPI GGNCC 1 cut(s) 1599
PsuI RGATCY 2 cut(s) 1054, 1699
RsaI GTAC 3 cut(s) 661, 1037, 1173
RsaNI GTAC 3 cut(s) 660, 1036, 1172
RseI CAYNNNNRTG 5 cut(s) 783, 796, 884, 1031, 1195
SaqAI TTAA 5 cut(s) 402, 515, 569, 867, 899
SatI GCNGC 2 cut(s) 1089, 1311
Sau3AI GATC 8 cut(s) 496, 1054, 1103, 1291, 1437, 1686, 1699, 1783
Sau96I GGNCC 1 cut(s) 1599
SchI GAGTC 1 cut(s) 1667
ScrFI CCNGG 5 cut(s) 94, 189, 458, 597, 735
SduI GDGCHC 3 cut(s) 306, 359, 974
SfaNI GCATC 1 cut(s) 650
SfcI CTRYAG 1 cut(s) 504
SfuI TTCGAA 1 cut(s) 168
SinI GGWCC 1 cut(s) 1599
SmiMI CAYNNNNRTG 5 cut(s) 783, 796, 884, 1031, 1195
SmlI CTYRAG 1 cut(s) 1675
SmoI CTYRAG 1 cut(s) 1675
SpeI ACTAGT 1 cut(s) 328
SsiI CCGC 3 cut(s) 385, 960, 1790
SspI AATATT 2 cut(s) 1717, 1773
SspMI CTAG 9 cut(s) 198, 329, 446, 557, 1163, 1544, 1710, 1724, 1767
StyD4I CCNGG 5 cut(s) 92, 187, 456, 595, 733
StyI CCWWGG 1 cut(s) 1348
TaaI ACNGT 5 cut(s) 9, 253, 1081, 1152, 1599
TaiI ACGT 3 cut(s) 796, 1065, 1195
TaqI TCGA 9 cut(s) 168, 389, 520, 670, 811, 884, 1290, 1440, 1584
TatI WGTACW 2 cut(s) 659, 1035
TfiI GAWTC 4 cut(s) 89, 391, 775, 1489
Tru1I TTAA 5 cut(s) 402, 515, 569, 867, 899
Tru9I TTAA 5 cut(s) 402, 515, 569, 867, 899
TscAI CASTG 2 cut(s) 12, 258
TseFI GTSAC 2 cut(s) 582, 739
TseI GCWGC 2 cut(s) 1088, 1310
Tsp45I GTSAC 2 cut(s) 582, 739
TspDTI ATGAA 7 cut(s) 486, 542, 996, 1353, 1404, 1470, 1751
TspGWI ACGGA 1 cut(s) 1794
TspRI CASTG 2 cut(s) 12, 258
Van91I CCANNNNNTGG 1 cut(s) 108
VpaK11BI GGWCC 1 cut(s) 1599
XapI RAATTY 4 cut(s) 193, 216, 1445, 1746
XbaI TCTAGA 1 cut(s) 1723
XceI RCATGY 1 cut(s) 1555
XcmI CCANNNNNNNNNTGG 1 cut(s) 1355
XmiI GTMKAC 1 cut(s) 371
XmnI GAANNNNTTC 1 cut(s) 949
XspI CTAG 9 cut(s) 198, 329, 446, 557, 1163, 1544, 1710, 1724, 1767
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.