Prupe.4G031900_v2.0.a1

serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
OG0000112
Physical Location & Seq
Forward (+)
1482396 .. 1486146
3751 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G031900.1

Sequence Viewer

Length: 2427 bp
ATGTTTCTCAAAGCTTTGCTTGTGTTCTTCCTCCTCCTCTTTCCCTTTTGCTCATCCATTGACACCATAGCACTGAACCAACTTGTGAAAGATGGTGACTTTATAGTGTCCAAAGAAAACAACTTTGAATTAGGCTTCTTCAGCCCCGGCAATTCGAGCTTTCGCTATGTTGGGATTTGGTATGCTAATAAGTCTGAAAAGGCAGTGGTTTGGGTTGCAAACAGAAACAACCCCATCAATGATACCTCTGGTGTTCTCACAATCAACAGGTACGGAAAATTGGTTCTTTATGCTCACAATATTGACAACGTTTCTATTTGGTCAACAAATGTGTCGGTCGAAACCACAAGCACTCGTGTAGCTCAGCTTTTAGATACAGGCAATTTACTGCTTTTCCCGGATAGTATTAGTAAAAGTGAAAGCTTTATATGGCAGAGTTTTGATTACCCTACAGATACTCTACTTTCCGGAATGAAAGTTGGGTTGAATTGGAAAACTGGGATGGAATGGATCATAACATCTTGGAAGTCCCAAAATGACCCTGGAATGGGGAACTATAGCTTGAGGCTCAATTCCAATCAGACTGCTACGCCTGAATATTTTTTGTACAAGGGTTTGACCAAATATTGGAGAATGGATCCAGGGCCAAGGCCCATTTTTGTGACGGATAATGAAGAAATGTACTATTCCTTTTCGTCTGATAACACCTCAGTAGTTAGATCGGTGGTGACGGATTATGGGGTTAATCAACAACTGCTATGGAGTGAGGCTACTAATAAATGGGAGGAGCTCTGGGCTGCACCAAAATACCGGTGTGACCCATATGGCCACTGTGGTGCCAACAGCAAATGTAGCCCTGACAATATTAATAGGTTTGAGTGTGACTGCCTACCAGGGTATGAACCAAAATCTCAAAATGCTTGGAATGGGAGAGATGGGTCAGATGGGTGTGTGAGTAAGCGAGTGGGGGTGTCAAAGTGTGGGAATGGGGAAGGGTTTGTGAAGGTGGCACGGGTGAAAGAGCCAGACACATCGGAAGCAACACAATTGTTAGCAAGTATCAGTGCCAATGAGTGTGAGCAGGTGTGCTTACGCAATTGTTCCTGCACGGCATATATACACATAGAATGGGACGATCGCAATGATTGCTTGGTATGGTACGGTGAGTTGCTGGACATTTTAGTCCGCTCAGAGCTAGGACAAGATCTATATGTTCGGGTGGACAAAATGGAATTAGCTGATAATACCAGGAAATCGAAAGGTTTTCTCAAAAGGAGGGGTTTGCTGGCTATTGCAATAGTGGCTGTGCTTCTCGCATTCGTACTAATCATTGTGTTTGTGTACTGGTGGCTGAAGAGAAAGACGACGATAAAAGACTTTGTGGAGGCGGATGAACTTGAGGAAACTAGGAGACACCCAGAGCTGCAATTTTTCCATCTGAACGCAATAATAGTAGCCACAGACAACTTCTCTCCTGTCAATAAACTTGGCCAAGGTGGTTTTGGCACTGTTTATAAAGGTCTGTTAGCAAATGATCAGAAGATTGCTGTAAAAAGATTGTCCAAAACTTCAGGACAAGGAATTGAAGAATTCAAAAATGAAGTTGCTCTGATAGCTAGACTTCAACACAGAAATCTTGTGAAACTTTTGGGCTGTTGTATAAAGGGAGAAGAAAGGATGTTAGTTCTGGAACACTTGCCAAACAAAAGCTTGGACTCCATTCTTTTTGATCACGCTAAAAGATCCTTGTTGGATTGGAAAAAGCGGTTTGAAATTATCAATGGGGTTGCTCGTGGGATTCTGTATCTTCACCAGGACTCAAGACTTAGGATAATCCATAGGGATCTAAAAACCAGTAATGTTCTTCTAGATGCTGAGATGAACCCAAAAGTTTCAGATTTTGGCATGGCAAGAATATTCCATGGGGACAAACTGCAGGATAAGACCAATAGAGTTGTTGGAACATATGGCTATATGTCACCAGAGTATGCAGTGTTCGGGAGATATTCAACGAAATCAGATGTCTTTAGTTTTGGGATCATATTGTTAGAGATTGTAAGCGGCAAGAAAAACAGCTGTTCTTATCAGCAGGATGAATCGCTAAACTTGATAGGACATGTTTGGCAGCTGTGGAGAGAAGATAGAGCCTTAGAAATTGTGGATTCATCTGTAGCGTCATATGTGCCTGATGAAGTCATGAGATGCATTCAAGTTGGTCTCTTGTGTGTGCAAGAAGATCCAAAGGACCGACCAAGCATGTCAACTGTTGTCTTCATGTTGAGTGGTGAAGCATCTCCTCCATCTCCTAAGCAGCCTGCATTTGTCTTCAGAAAAAGTTCCGGCAATGATGCTGCTGATCCATCAATTCCAAAAGGATCAGATTCGTCTATTAACGACTTGACAATAACTAAACTTGAATCTCGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
B_lectin DUF3403 PAN_2 Pkinase Pkinase_Tyr S_locus_glycop

Protein Analysis

809

Amino Acids

91.3

Weight (kDa)

6.51

Isoelectric Point (pI)

37.36

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000112)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g03320 FvH4_3g03322 FvH4_3g03323 FvH4_3g03340 FvH4_3g03350 FvH4_3g03351 FvH4_3g03370 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g06140 FvH4_6g00257 FvH4_6g00257 FvH4_6g00270 FvH4_6g00300 FvH4_6g20800 FvH4_6g20800 FvH4_6g20800 FvH4_6g20800 FvH4_6g20800
malus_domestica MD05G1232700.v1.1 MD05G1327700.v1.1 MD05G1327800.v1.1 MD05G1327900.v1.1 MD05G1328000.v1.1 MD05G1328200.v1.1 MD05G1328300.v1.1 MD05G1328500.v1.1 MD05G1332000.v1.1 MD05G1332100.v1.1 MD10G1307600.v1.1 MD10G1307800.v1.1
prunus_persica Prupe.4G031900_v2.0.a1 Prupe.4G032000_v2.0.a1 Prupe.4G032000_v2.0.a1 Prupe.4G032100_v2.0.a1 Prupe.4G032200_v2.0.a1 Prupe.4G032200_v2.0.a1 Prupe.4G032200_v2.0.a1
pyrus_communis pycom05g30180 pycom05g30190 pycom05g30200 pycom05g30210 pycom10g25920 pycom10g25930
rosa_chinensis RchiOBHm_Chr2g0130831 RchiOBHm_Chr2g0132531 RchiOBHm_Chr2g0132541 RchiOBHm_Chr3g0455681 RchiOBHm_Chr3g0476681 RchiOBHm_Chr3g0476761 RchiOBHm_Chr3g0476771 RchiOBHm_Chr3g0476791 RchiOBHm_Chr3g0476801 RchiOBHm_Chr3g0476811 RchiOBHm_Chr4g0413551 RchiOBHm_Chr4g0413561 RchiOBHm_Chr5g0002911 RchiOBHm_Chr5g0005071 RchiOBHm_Chr5g0005101 RchiOBHm_Chr5g0005111 RchiOBHm_Chr5g0005121 RchiOBHm_Chr5g0005131 RchiOBHm_Chr5g0005141 RchiOBHm_Chr5g0005161 RchiOBHm_Chr5g0005171 RchiOBHm_Chr5g0006341 RchiOBHm_Chr5g0046161 RchiOBHm_Chr5g0046171 RchiOBHm_Chr5g0046181 RchiOBHm_Chr5g0046221 RchiOBHm_Chr5g0046231 RchiOBHm_Chr7g0224061 RchiOBHm_Chr7g0224081 RchiOBHm_Chr7g0224101 RchiOBHm_Chr7g0224111 RchiOBHm_Chr7g0224121
rosa_laevigata RLG00000010193 RLG00000019146 RLG00000019148 RLG00000019149 RLG00000019150 RLG00000023750 RLG00000023751 RLG00000023753 RLG00000029486 RLG00000031068 RLG00000031069 RLG00000031284 RLG00000031285 RLG00000031286 RLG00000031289 RLG00000031290 RLG00000031291 RLG00000031292 RLG00000031293 RLG00000031294 RLG00000031295 RLG00000031296 RLG00000031297 RLG00000031363 RLG00000032618 RLG00000032619
rosa_multiflora Rmu_co8147584.1_g000001 Rmu_co8205828.1_g000001 Rmu_co8373645.1_g000001 Rmu_co8407679.1_g000001 Rmu_co8452561.1_g000001 Rmu_sc0001035.1_g000076 Rmu_sc0001884.1_g000026 Rmu_sc0001884.1_g000027 Rmu_sc0001884.1_g000035 Rmu_sc0002157.1_g000026 Rmu_sc0002399.1_g000006 Rmu_sc0002399.1_g000007 Rmu_sc0002883.1_g000010 Rmu_sc0003629.1_g000014 Rmu_sc0003884.1_g000004 Rmu_sc0007865.1_g000005 Rmu_sc0008085.1_g000013 Rmu_sc0008085.1_g000014 Rmu_sc0008085.1_g000016 Rmu_sc0008085.1_g000018 Rmu_sc0008432.1_g000004 Rmu_sc0008714.1_g000002 Rmu_sc0009296.1_g000008 Rmu_sc0009296.1_g000009 Rmu_sc0009296.1_g000011 Rmu_sc0010281.1_g000001 Rmu_sc0010281.1_g000002 Rmu_sc0010714.1_g000011 Rmu_sc0010714.1_g000016 Rmu_sc0011169.1_g000001 Rmu_sc0011169.1_g000007 Rmu_sc0013603.1_g000006 Rmu_sc0020478.1_g000003 Rmu_sc0020478.1_g000007 Rmu_sc0025106.1_g000012 Rmu_sc0032709.1_g000001 Rmu_sc0033028.1_g000001
rosa_roxburghii Rroxscaffold_1G00069570 Rroxscaffold_1G00069610 Rroxscaffold_1G00069620 Rroxscaffold_1G00070480 Rroxscaffold_1G00070490 Rroxscaffold_1G00070500 Rroxscaffold_1G00070510 Rroxscaffold_1G00070520 Rroxscaffold_1G00070530 Rroxscaffold_1G00070540 Rroxscaffold_1G00070550 Rroxscaffold_1G00070590 Rroxscaffold_1G00072950 Rroxscaffold_1G00073080 Rroxscaffold_2G00111810 Rroxscaffold_2G00111820 Rroxscaffold_2G00113530 Rroxscaffold_2G00113870 Rroxscaffold_6G00405010 Rroxscaffold_6G00405020 Rroxscaffold_6G00423590 Rroxscaffold_6G00424100
rosa_rugosa Rorug02G0293200 Rorug02G0293300 Rorug02G0293400 Rorug02G0305900 Rorug02G0305900 Rorug03G0009100 Rorug03G0157000 Rorug03G0157000 Rorug03G0304900 Rorug04G0400500 Rorug04G0415200 Rorug04G0415300 Rorug04G0415400 Rorug04G0415500 Rorug04G0421100 Rorug05G0068000 Rorug05G0068100 Rorug05G0068200 Rorug05G0068500 Rorug05G0224600 Rorug05G0224700
rosa_samantha Rh2CG331700 Rh2CG341600 Rh2CG341700 Rh2DG381200 Rh3DG071200 Rh3DG233400 Rh3DG233500 Rh3DG233600 Rh5AG043100 Rh5CG026000 Rh5CG047700 Rh5CG047800 Rh5CG047900 Rh5CG048000 Rh5CG048100 Rh5CG048300 Rh5CG056500 Rh5CG340500 Rh5CG340700 Rh5CG340800 Rh7AG365000
rosa_wichuraiana Rw0G002360 Rw0G002370 Rw0G012520 Rw0G018230 Rw0G019190 Rw2G027480 Rw2G029150 Rw3G005520 Rw3G005880 Rw3G005890 Rw3G018840 Rw3G018850 Rw3G018870 Rw3G018880 Rw3G020740 Rw5G002190 Rw5G004180 Rw5G004190 Rw5G004890 Rw5G013960 Rw5G014000 Rw5G028610 Rw7G030910 Rw7G030920

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1515
AarI CACCTGC 1 cut(s) 1072
AasI GACNNNNNNGTC 1 cut(s) 1181
Acc36I ACCTGC 1 cut(s) 1072
AccB1I GGYRCC 1 cut(s) 836
AccB7I CCANNNNNTGG 1 cut(s) 627
AccBSI CCGCTC 1 cut(s) 1188
AccIII TCCGGA 1 cut(s) 467
AciI CCGC 4 cut(s) 1186, 1388, 1765, 2061
AclI AACGTT 1 cut(s) 309
AclWI GGATC 9 cut(s) 518, 632, 645, 1737, 1851, 2045, 2231, 2351, 2383
AcoI YGGCCR 2 cut(s) 826, 1489
AcsI RAATTY 1 cut(s) 1589
AcuI CTGAAG 4 cut(s) 124, 1373, 1554, 2311
AfaI GTAC 6 cut(s) 272, 608, 683, 1160, 1323, 1343
AfiI CCNNNNNNNGG 3 cut(s) 547, 548, 627
AflIII ACRYGT 1 cut(s) 2116
AgeI ACCGGT 1 cut(s) 810
AgsI TTSAA 9 cut(s) 128, 487, 1586, 1594, 1625, 1772, 2010, 2210, 2417
AjnI CCWGG 5 cut(s) 541, 640, 892, 1247, 1812
AleI CACNNNNGTG 1 cut(s) 834
AloI GAACNNNNNNTCC 2 cut(s) 267, 299
Alw21I GWGCWC 1 cut(s) 792
Alw26I GTCTC 2 cut(s) 1405, 2222
AlwI GGATC 9 cut(s) 518, 632, 645, 1737, 1851, 2045, 2231, 2351, 2383
Aor13HI TCCGGA 1 cut(s) 467
AoxI GGCC 4 cut(s) 644, 650, 826, 1489
ApeKI GCWGC 5 cut(s) 797, 1423, 2125, 2311, 2351
ApoI RAATTY 1 cut(s) 1589
AseI ATTAAT 1 cut(s) 867
AsiGI ACCGGT 1 cut(s) 810
Asp700I GAANNNNTTC 1 cut(s) 2335
AspS9I GGNCC 3 cut(s) 644, 651, 2245
AsuC2I CCSGG 2 cut(s) 147, 398
AsuHPI GGTGA 7 cut(s) 107, 739, 1027, 1175, 1802, 1971, 2297
AvaII GGWCC 1 cut(s) 2245
BalI TGGCCA 2 cut(s) 828, 1491
BamHI GGATCC 1 cut(s) 637
BanI GGYRCC 1 cut(s) 836
BanII GRGCYC 1 cut(s) 792
BauI CACGAG 2 cut(s) 354, 1791
BbsI GAAGAC 2 cut(s) 2263, 2317
Bbv12I GWGCWC 1 cut(s) 792
BbvI GCAGC 5 cut(s) 784, 1410, 2137, 2323, 2338
BccI CCATC 8 cut(s) 86, 242, 496, 929, 938, 1443, 2308, 2368
BceAI ACGGC 1 cut(s) 1125
BciT130I CCWGG 5 cut(s) 543, 642, 894, 1249, 1814
BclI TGATCA 2 cut(s) 1534, 1729
BcnI CCSGG 2 cut(s) 147, 398
BcoDI GTCTC 2 cut(s) 1405, 2222
BfaI CTAG 4 cut(s) 1196, 1407, 1617, 1868
BfmI CTRYAG 4 cut(s) 450, 556, 1934, 2169
BfuAI ACCTGC 1 cut(s) 1072
BglII AGATCT 1 cut(s) 1204
BisI GCNGC 6 cut(s) 798, 1424, 2062, 2126, 2312, 2352
BlpI GCTNAGC 1 cut(s) 363
BlsI GCNGC 6 cut(s) 799, 1425, 2063, 2127, 2313, 2353
Bme1390I CCNGG 7 cut(s) 147, 398, 543, 642, 894, 1249, 1814
Bme18I GGWCC 1 cut(s) 2245
BmgT120I GGNCC 3 cut(s) 644, 651, 2245
BmiI GGNNCC 2 cut(s) 639, 838
BmrFI CCNGG 7 cut(s) 147, 398, 543, 642, 894, 1249, 1814
BmrI ACTGGG 1 cut(s) 507
BmsI GCATC 4 cut(s) 1861, 2192, 2300, 2338
BmuI ACTGGG 1 cut(s) 507
BpiI GAAGAC 2 cut(s) 2263, 2317
Bpu10I CCTNAGC 1 cut(s) 2307
Bpu1102I GCTNAGC 1 cut(s) 363
BpuEI CTTGAG 3 cut(s) 583, 1418, 1804
BpuMI CCSGG 2 cut(s) 147, 398
BsaI GGTCTC 1 cut(s) 2222
BsaJI CCNNGG 7 cut(s) 145, 541, 641, 647, 893, 1492, 1921
BsaWI WCCGGW 2 cut(s) 467, 810
Bsc4I CCNNNNNNNGG 3 cut(s) 547, 548, 627
Bse118I RCCGGY 1 cut(s) 810
Bse1I ACTGG 3 cut(s) 502, 1349, 1854
Bse3DI GCAATG 2 cut(s) 1147, 2350
BseAI TCCGGA 1 cut(s) 467
BseBI CCWGG 5 cut(s) 543, 642, 894, 1249, 1814
BseDI CCNNGG 7 cut(s) 145, 541, 641, 647, 893, 1492, 1921
BseGI GGATG 5 cut(s) 53, 507, 1396, 1683, 2098
BseLI CCNNNNNNNGG 3 cut(s) 547, 548, 627
BseMI GCAATG 2 cut(s) 1147, 2350
BseMII CTCAG 4 cut(s) 377, 723, 1203, 1866
BseNI ACTGG 3 cut(s) 502, 1349, 1854
BseRI GAGGAG 4 cut(s) 23, 26, 800, 2286
BseXI GCAGC 5 cut(s) 784, 1410, 2137, 2323, 2338
BsgI GTGCAG 2 cut(s) 783, 1090
Bsh1285I CGRYCG 2 cut(s) 339, 1138
BshFI GGCC 4 cut(s) 646, 652, 828, 1491
BshNI GGYRCC 1 cut(s) 836
BshTI ACCGGT 1 cut(s) 810
BsiEI CGRYCG 2 cut(s) 339, 1138
BsiHKAI GWGCWC 1 cut(s) 792
BsiSI CCGG 5 cut(s) 147, 398, 468, 811, 2340
BslFI GGGAC 3 cut(s) 514, 1145, 1940
BslI CCNNNNNNNGG 3 cut(s) 547, 548, 627
BsmAI GTCTC 2 cut(s) 1405, 2222
BsmFI GGGAC 3 cut(s) 514, 1145, 1940
BsmI GAATGC 2 cut(s) 1316, 2205
BsnI GGCC 4 cut(s) 646, 652, 828, 1491
Bso31I GGTCTC 1 cut(s) 2222
Bsp1286I GDGCHC 1 cut(s) 792
Bsp13I TCCGGA 1 cut(s) 467
Bsp1407I TGTACA 1 cut(s) 606
Bsp1720I GCTNAGC 1 cut(s) 363
Bsp19I CCATGG 1 cut(s) 1921
BspACI CCGC 4 cut(s) 1186, 1388, 1765, 2061
BspANI GGCC 4 cut(s) 646, 652, 828, 1491
BspCNI CTCAG 4 cut(s) 376, 722, 1202, 1867
BspEI TCCGGA 1 cut(s) 467
BspHI TCATGA 1 cut(s) 2196
BspLI GGNNCC 2 cut(s) 639, 838
BspMAI CTGCAG 1 cut(s) 1938
BspMI ACCTGC 1 cut(s) 1072
BspPI GGATC 9 cut(s) 518, 632, 645, 1737, 1851, 2045, 2231, 2351, 2383
BspT107I GGYRCC 1 cut(s) 836
BspTNI GGTCTC 1 cut(s) 2222
BsrBI CCGCTC 1 cut(s) 1188
BsrDI GCAATG 2 cut(s) 1147, 2350
BsrFI RCCGGY 1 cut(s) 810
BsrGI TGTACA 1 cut(s) 606
BsrI ACTGG 3 cut(s) 502, 1349, 1854
BssAI RCCGGY 1 cut(s) 810
BssECI CCNNGG 7 cut(s) 145, 541, 641, 647, 893, 1492, 1921
BssSI CACGAG 2 cut(s) 354, 1791
BssT1I CCWWGG 3 cut(s) 647, 1492, 1921
Bst2BI CACGAG 2 cut(s) 354, 1791
Bst2UI CCWGG 5 cut(s) 543, 642, 894, 1249, 1814
Bst4CI ACNGT 4 cut(s) 833, 1163, 1510, 2266
Bst6I CTCTTC 1 cut(s) 1349
BstAPI GCANNNNNTGC 1 cut(s) 1146
BstAUI TGTACA 1 cut(s) 606
BstC8I GCNNGC 2 cut(s) 1287, 2316
BstDEI CTNAG 7 cut(s) 363, 709, 1189, 1826, 1875, 2149, 2307
BstDSI CCRYGG 1 cut(s) 1921
BstF5I GGATG 5 cut(s) 53, 507, 1396, 1683, 2098
BstMAI GTCTC 2 cut(s) 1405, 2222
BstMCI CGRYCG 2 cut(s) 339, 1138
BstMWI GCNNNNNNNGC 6 cut(s) 141, 156, 852, 1146, 1301, 1613
BstNI CCWGG 5 cut(s) 543, 642, 894, 1249, 1814
BstNSI RCATGY 2 cut(s) 2120, 2260
BstSCI CCNGG 7 cut(s) 145, 396, 541, 640, 892, 1247, 1812
BstSFI CTRYAG 4 cut(s) 450, 556, 1934, 2169
BstV1I GCAGC 5 cut(s) 784, 1410, 2137, 2323, 2338
BstV2I GAAGAC 2 cut(s) 2263, 2317
BstX2I RGATCY 5 cut(s) 637, 1204, 1742, 1843, 2236
BstYI RGATCY 5 cut(s) 637, 1204, 1742, 1843, 2236
BsuRI GGCC 4 cut(s) 646, 652, 828, 1491
BtgI CCRYGG 1 cut(s) 1921
BtsCI GGATG 5 cut(s) 53, 507, 1396, 1683, 2098
BtsI GCAGTG 2 cut(s) 210, 1998
BtsIMutI CAGTG 6 cut(s) 71, 210, 829, 1069, 1506, 1998
BveI ACCTGC 1 cut(s) 1072
Cac8I GCNNGC 2 cut(s) 1287, 2316
CciI TCATGA 1 cut(s) 2196
Cfr10I RCCGGY 1 cut(s) 810
Cfr13I GGNCC 3 cut(s) 644, 651, 2245
CseI GACGC 1 cut(s) 2163
Csp6I GTAC 6 cut(s) 271, 607, 682, 1159, 1322, 1342
CspAI ACCGGT 1 cut(s) 810
CviAII CATG 6 cut(s) 1906, 1922, 2117, 2197, 2257, 2275
CviQI GTAC 6 cut(s) 271, 607, 682, 1159, 1322, 1342
DdeI CTNAG 7 cut(s) 363, 709, 1189, 1826, 1875, 2149, 2307
DrdI GACNNNNNNGTC 1 cut(s) 1181
DseDI GACNNNNNNGTC 1 cut(s) 1181
EaeI YGGCCR 2 cut(s) 826, 1489
Eam1104I CTCTTC 1 cut(s) 1349
EarI CTCTTC 1 cut(s) 1349
EciI GGCGGA 1 cut(s) 1403
Ecl136II GAGCTC 1 cut(s) 790
Eco130I CCWWGG 3 cut(s) 647, 1492, 1921
Eco24I GRGCYC 1 cut(s) 792
Eco31I GGTCTC 1 cut(s) 2222
Eco47I GGWCC 1 cut(s) 2245
Eco53kI GAGCTC 1 cut(s) 790
Eco57I CTGAAG 4 cut(s) 124, 1373, 1554, 2311
EcoICRI GAGCTC 1 cut(s) 790
EcoRI GAATTC 1 cut(s) 1589
EcoRII CCWGG 5 cut(s) 541, 640, 892, 1247, 1812
EcoT14I CCWWGG 3 cut(s) 647, 1492, 1921
EcoT22I ATGCAT 1 cut(s) 2207
EcoT38I GRGCYC 1 cut(s) 792
ErhI CCWWGG 3 cut(s) 647, 1492, 1921
FaeI CATG 6 cut(s) 1909, 1925, 2120, 2200, 2260, 2278
FalI AAGNNNNNCTT 1 cut(s) 35
FaqI GGGAC 3 cut(s) 514, 1145, 1940
FatI CATG 6 cut(s) 1905, 1921, 2116, 2196, 2256, 2274
FauNDI CATATG 3 cut(s) 823, 1966, 2179
FbaI TGATCA 2 cut(s) 1534, 1729
Fnu4HI GCNGC 6 cut(s) 798, 1424, 2062, 2126, 2312, 2352
FokI GGATG 5 cut(s) 40, 514, 1403, 1690, 2105
FriOI GRGCYC 1 cut(s) 792
Fsp4HI GCNGC 6 cut(s) 798, 1424, 2062, 2126, 2312, 2352
FspBI CTAG 4 cut(s) 1196, 1407, 1617, 1868
GluI GCNGC 6 cut(s) 798, 1424, 2062, 2126, 2312, 2352
HaeIII GGCC 4 cut(s) 646, 652, 828, 1491
HapII CCGG 5 cut(s) 147, 398, 468, 811, 2340
HgaI GACGC 1 cut(s) 2163
Hin1II CATG 6 cut(s) 1909, 1925, 2120, 2200, 2260, 2278
HincII GTYRAC 2 cut(s) 324, 2262
HindII GTYRAC 2 cut(s) 324, 2262
HindIII AAGCTT 3 cut(s) 12, 421, 1708
HinfI GANTC 7 cut(s) 1715, 1798, 1817, 2096, 2162, 2381, 2417
HpaII CCGG 5 cut(s) 147, 398, 468, 811, 2340
HphI GGTGA 7 cut(s) 107, 739, 1027, 1175, 1802, 1971, 2297
Hpy166II GTNNAC 4 cut(s) 324, 1222, 1342, 2262
Hpy188III TCNNGA 8 cut(s) 468, 1572, 1688, 1821, 1868, 1999, 2197, 2421
Hpy8I GTNNAC 4 cut(s) 324, 1222, 1342, 2262
Hpy99I CGWCG 1 cut(s) 1369
HpyAV CCTTC 2 cut(s) 986, 997
HpyCH4III ACNGT 4 cut(s) 833, 1163, 1510, 2266
HpyCH4IV ACGT 1 cut(s) 309
HpyF10VI GCNNNNNNNGC 6 cut(s) 141, 156, 852, 1146, 1301, 1613
HpyF3I CTNAG 7 cut(s) 363, 709, 1189, 1826, 1875, 2149, 2307
HpySE526I ACGT 1 cut(s) 309
Hsp92II CATG 6 cut(s) 1909, 1925, 2120, 2200, 2260, 2278
Kpn2I TCCGGA 1 cut(s) 467
Ksp22I TGATCA 2 cut(s) 1534, 1729
LmnI GCTCC 1 cut(s) 787
Lsp1109I GCAGC 5 cut(s) 784, 1410, 2137, 2323, 2338
LweI GCATC 4 cut(s) 1861, 2192, 2300, 2338
MaeI CTAG 4 cut(s) 1196, 1407, 1617, 1868
MaeII ACGT 1 cut(s) 309
MaeIII GTNAC 6 cut(s) 95, 661, 727, 815, 881, 1977
MbiI CCGCTC 1 cut(s) 1188
MfeI CAATTG 2 cut(s) 1046, 1096
MflI RGATCY 5 cut(s) 637, 1204, 1742, 1843, 2236
MhlI GDGCHC 1 cut(s) 792
MlsI TGGCCA 2 cut(s) 828, 1491
MluNI TGGCCA 2 cut(s) 828, 1491
MlyI GAGTC 2 cut(s) 1709, 1811
MmeI TCCRAC 2 cut(s) 1731, 1939
Mox20I TGGCCA 2 cut(s) 828, 1491
Mph1103I ATGCAT 1 cut(s) 2207
MroI TCCGGA 1 cut(s) 467
MroXI GAANNNNTTC 1 cut(s) 2335
MscI TGGCCA 2 cut(s) 828, 1491
MseI TTAA 3 cut(s) 744, 867, 2391
MslI CAYNNNNRTG 2 cut(s) 659, 834
Msp20I TGGCCA 2 cut(s) 828, 1491
MspA1I CMGCKG 2 cut(s) 2076, 2128
MspI CCGG 5 cut(s) 147, 398, 468, 811, 2340
MspR9I CCNGG 7 cut(s) 147, 398, 543, 642, 894, 1249, 1814
MunI CAATTG 2 cut(s) 1046, 1096
Mva1269I GAATGC 2 cut(s) 1316, 2205
MvaI CCWGG 5 cut(s) 543, 642, 894, 1249, 1814
MwoI GCNNNNNNNGC 6 cut(s) 141, 156, 852, 1146, 1301, 1613
NciI CCSGG 2 cut(s) 147, 398
NcoI CCATGG 1 cut(s) 1921
NdeI CATATG 3 cut(s) 823, 1966, 2179
NlaIII CATG 6 cut(s) 1909, 1925, 2120, 2200, 2260, 2278
NlaIV GGNNCC 2 cut(s) 639, 838
NmuCI GTSAC 6 cut(s) 95, 661, 727, 815, 881, 1977
NsiI ATGCAT 1 cut(s) 2207
NspI RCATGY 2 cut(s) 2120, 2260
OliI CACNNNNGTG 1 cut(s) 834
PagI TCATGA 1 cut(s) 2196
PaqCI CACCTGC 1 cut(s) 1072
PciI ACATGT 1 cut(s) 2116
PctI GAATGC 2 cut(s) 1316, 2205
PdmI GAANNNNTTC 1 cut(s) 2335
PfeI GAWTC 5 cut(s) 1798, 2096, 2162, 2381, 2417
PflMI CCANNNNNTGG 1 cut(s) 627
PfoI TCCNGGA 1 cut(s) 396
PinAI ACCGGT 1 cut(s) 810
PkrI GCNGC 6 cut(s) 799, 1425, 2063, 2127, 2313, 2353
Ple19I CGATCG 1 cut(s) 1138
PleI GAGTC 2 cut(s) 1709, 1811
PpsI GAGTC 2 cut(s) 1709, 1811
PscI ACATGT 1 cut(s) 2116
PshBI ATTAAT 1 cut(s) 867
PsiI TTATAA 1 cut(s) 1515
Psp124BI GAGCTC 1 cut(s) 792
Psp1406I AACGTT 1 cut(s) 309
Psp6I CCWGG 5 cut(s) 541, 640, 892, 1247, 1812
PspGI CCWGG 5 cut(s) 541, 640, 892, 1247, 1812
PspN4I GGNNCC 2 cut(s) 639, 838
PspPI GGNCC 3 cut(s) 644, 651, 2245
PsrI GAACNNNNNNTAC 2 cut(s) 1979, 2011
PstI CTGCAG 1 cut(s) 1938
PsuI RGATCY 5 cut(s) 637, 1204, 1742, 1843, 2236
PvuI CGATCG 1 cut(s) 1138
PvuII CAGCTG 2 cut(s) 2076, 2128
RsaI GTAC 6 cut(s) 272, 608, 683, 1160, 1323, 1343
RsaNI GTAC 6 cut(s) 271, 607, 682, 1159, 1322, 1342
RseI CAYNNNNRTG 2 cut(s) 659, 834
SacI GAGCTC 1 cut(s) 792
SaqAI TTAA 3 cut(s) 744, 867, 2391
SatI GCNGC 6 cut(s) 798, 1424, 2062, 2126, 2312, 2352
Sau96I GGNCC 3 cut(s) 644, 651, 2245
SchI GAGTC 2 cut(s) 1709, 1811
ScrFI CCNGG 7 cut(s) 147, 398, 543, 642, 894, 1249, 1814
SduI GDGCHC 1 cut(s) 792
SfaNI GCATC 4 cut(s) 1861, 2192, 2300, 2338
SfcI CTRYAG 4 cut(s) 450, 556, 1934, 2169
SinI GGWCC 1 cut(s) 2245
SmiMI CAYNNNNRTG 2 cut(s) 659, 834
SmlI CTYRAG 3 cut(s) 562, 1397, 1819
SmoI CTYRAG 3 cut(s) 562, 1397, 1819
SsiI CCGC 4 cut(s) 1186, 1388, 1765, 2061
SspI AATATT 5 cut(s) 301, 599, 626, 865, 1917
SspMI CTAG 4 cut(s) 1196, 1407, 1617, 1868
SstI GAGCTC 1 cut(s) 792
StyD4I CCNGG 7 cut(s) 145, 396, 541, 640, 892, 1247, 1812
StyI CCWWGG 3 cut(s) 647, 1492, 1921
TaaI ACNGT 4 cut(s) 833, 1163, 1510, 2266
TaiI ACGT 1 cut(s) 312
TaqI TCGA 4 cut(s) 155, 339, 1256, 2422
TaqII GACCGA 2 cut(s) 325, 2262
TatI WGTACW 3 cut(s) 606, 681, 1341
TauI GCSGC 1 cut(s) 2064
TfiI GAWTC 5 cut(s) 1798, 2096, 2162, 2381, 2417
Tru1I TTAA 3 cut(s) 744, 867, 2391
Tru9I TTAA 3 cut(s) 744, 867, 2391
TscAI CASTG 6 cut(s) 78, 210, 836, 1069, 1513, 1998
TseFI GTSAC 6 cut(s) 95, 661, 727, 815, 881, 1977
TseI GCWGC 5 cut(s) 797, 1423, 2125, 2311, 2351
Tsp45I GTSAC 6 cut(s) 95, 661, 727, 815, 881, 1977
TspGWI ACGGA 3 cut(s) 288, 680, 746
TspRI CASTG 6 cut(s) 78, 210, 836, 1069, 1513, 1998
Van91I CCANNNNNTGG 1 cut(s) 627
VpaK11BI GGWCC 1 cut(s) 2245
VspI ATTAAT 1 cut(s) 867
XapI RAATTY 1 cut(s) 1589
XbaI TCTAGA 1 cut(s) 1867
XceI RCATGY 2 cut(s) 2120, 2260
XcmI CCANNNNNNNNNTGG 2 cut(s) 539, 1499
XmnI GAANNNNTTC 1 cut(s) 2335
XspI CTAG 4 cut(s) 1196, 1407, 1617, 1868
Zsp2I ATGCAT 1 cut(s) 2207
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.