RchiOBHm_Chr7g0224081

serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
Physical Location & Seq
Forward (+)
45940899 .. 45941701
803 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ20064

Sequence Viewer

Length: 516 bp
ATGAAAGTTGGACTGAATTGGAAAACTGGGCTAGAATGGGTTTTAACATCTTGGAAGTCACAAGATGACCCCGGAACTGGGGACCATACCTTTAGGCTTCATTCAGATCAGAGTACTACCTCCCCCCAATATTTTATGTATAAAGGTTTGAGAAAATATTGGCGAAGTGATCCAGGGCCAGGGCCTAGTTTGGTCACTAATCAAGAGGAAACTTATTATATCCTAAATTACACCGATGCAATTACGAGAATGACGTTGACTGATTCTGATGGACTCAAATTAAATACAATTACATGCATAGAAATGCGTGTAATCAAGTGCCTCAGAAATTGTTCTTGCACTGCATATTTGAGCATTGAAAATGAAGGGATTGTTGATTGCTTGATATGGTATGATGACTTGATGGACATTTTAGTGTACACAGAGCTTGGACGAGATCTCTACGTTCGTGTGAATGCAACCGTGTTAGGTACTAATCTGCTTGCAATGGAAGCAAACTCAACTAACTACATATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

171

Amino Acids

19.58

Weight (kDa)

4.84

Isoelectric Point (pI)

31.5

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PAN_2 PF08276 105 - 137 1.4e-08 PAN-like domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000112)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g03320 FvH4_3g03322 FvH4_3g03323 FvH4_3g03340 FvH4_3g03350 FvH4_3g03351 FvH4_3g03370 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g06140 FvH4_6g00257 FvH4_6g00257 FvH4_6g00270 FvH4_6g00300 FvH4_6g20800 FvH4_6g20800 FvH4_6g20800 FvH4_6g20800 FvH4_6g20800
malus_domestica MD05G1232700.v1.1 MD05G1327700.v1.1 MD05G1327800.v1.1 MD05G1327900.v1.1 MD05G1328000.v1.1 MD05G1328200.v1.1 MD05G1328300.v1.1 MD05G1328500.v1.1 MD05G1332000.v1.1 MD05G1332100.v1.1 MD10G1307600.v1.1 MD10G1307800.v1.1
prunus_persica Prupe.4G031900_v2.0.a1 Prupe.4G032000_v2.0.a1 Prupe.4G032000_v2.0.a1 Prupe.4G032100_v2.0.a1 Prupe.4G032200_v2.0.a1 Prupe.4G032200_v2.0.a1 Prupe.4G032200_v2.0.a1
pyrus_communis pycom05g30180 pycom05g30190 pycom05g30200 pycom05g30210 pycom10g25920 pycom10g25930
rosa_chinensis RchiOBHm_Chr2g0130831 RchiOBHm_Chr2g0132531 RchiOBHm_Chr2g0132541 RchiOBHm_Chr3g0455681 RchiOBHm_Chr3g0476681 RchiOBHm_Chr3g0476761 RchiOBHm_Chr3g0476771 RchiOBHm_Chr3g0476791 RchiOBHm_Chr3g0476801 RchiOBHm_Chr3g0476811 RchiOBHm_Chr4g0413551 RchiOBHm_Chr4g0413561 RchiOBHm_Chr5g0002911 RchiOBHm_Chr5g0005071 RchiOBHm_Chr5g0005101 RchiOBHm_Chr5g0005111 RchiOBHm_Chr5g0005121 RchiOBHm_Chr5g0005131 RchiOBHm_Chr5g0005141 RchiOBHm_Chr5g0005161 RchiOBHm_Chr5g0005171 RchiOBHm_Chr5g0006341 RchiOBHm_Chr5g0046161 RchiOBHm_Chr5g0046171 RchiOBHm_Chr5g0046181 RchiOBHm_Chr5g0046221 RchiOBHm_Chr5g0046231 RchiOBHm_Chr7g0224061 RchiOBHm_Chr7g0224081 RchiOBHm_Chr7g0224101 RchiOBHm_Chr7g0224111 RchiOBHm_Chr7g0224121
rosa_laevigata RLG00000010193 RLG00000019146 RLG00000019148 RLG00000019149 RLG00000019150 RLG00000023750 RLG00000023751 RLG00000023753 RLG00000029486 RLG00000031068 RLG00000031069 RLG00000031284 RLG00000031285 RLG00000031286 RLG00000031289 RLG00000031290 RLG00000031291 RLG00000031292 RLG00000031293 RLG00000031294 RLG00000031295 RLG00000031296 RLG00000031297 RLG00000031363 RLG00000032618 RLG00000032619
rosa_multiflora Rmu_co8147584.1_g000001 Rmu_co8205828.1_g000001 Rmu_co8373645.1_g000001 Rmu_co8407679.1_g000001 Rmu_co8452561.1_g000001 Rmu_sc0001035.1_g000076 Rmu_sc0001884.1_g000026 Rmu_sc0001884.1_g000027 Rmu_sc0001884.1_g000035 Rmu_sc0002157.1_g000026 Rmu_sc0002399.1_g000006 Rmu_sc0002399.1_g000007 Rmu_sc0002883.1_g000010 Rmu_sc0003629.1_g000014 Rmu_sc0003884.1_g000004 Rmu_sc0007865.1_g000005 Rmu_sc0008085.1_g000013 Rmu_sc0008085.1_g000014 Rmu_sc0008085.1_g000016 Rmu_sc0008085.1_g000018 Rmu_sc0008432.1_g000004 Rmu_sc0008714.1_g000002 Rmu_sc0009296.1_g000008 Rmu_sc0009296.1_g000009 Rmu_sc0009296.1_g000011 Rmu_sc0010281.1_g000001 Rmu_sc0010281.1_g000002 Rmu_sc0010714.1_g000011 Rmu_sc0010714.1_g000016 Rmu_sc0011169.1_g000001 Rmu_sc0011169.1_g000007 Rmu_sc0013603.1_g000006 Rmu_sc0020478.1_g000003 Rmu_sc0020478.1_g000007 Rmu_sc0025106.1_g000012 Rmu_sc0032709.1_g000001 Rmu_sc0033028.1_g000001
rosa_roxburghii Rroxscaffold_1G00069570 Rroxscaffold_1G00069610 Rroxscaffold_1G00069620 Rroxscaffold_1G00070480 Rroxscaffold_1G00070490 Rroxscaffold_1G00070500 Rroxscaffold_1G00070510 Rroxscaffold_1G00070520 Rroxscaffold_1G00070530 Rroxscaffold_1G00070540 Rroxscaffold_1G00070550 Rroxscaffold_1G00070590 Rroxscaffold_1G00072950 Rroxscaffold_1G00073080 Rroxscaffold_2G00111810 Rroxscaffold_2G00111820 Rroxscaffold_2G00113530 Rroxscaffold_2G00113870 Rroxscaffold_6G00405010 Rroxscaffold_6G00405020 Rroxscaffold_6G00423590 Rroxscaffold_6G00424100
rosa_rugosa Rorug02G0293200 Rorug02G0293300 Rorug02G0293400 Rorug02G0305900 Rorug02G0305900 Rorug03G0009100 Rorug03G0157000 Rorug03G0157000 Rorug03G0304900 Rorug04G0400500 Rorug04G0415200 Rorug04G0415300 Rorug04G0415400 Rorug04G0415500 Rorug04G0421100 Rorug05G0068000 Rorug05G0068100 Rorug05G0068200 Rorug05G0068500 Rorug05G0224600 Rorug05G0224700
rosa_samantha Rh2CG331700 Rh2CG341600 Rh2CG341700 Rh2DG381200 Rh3DG071200 Rh3DG233400 Rh3DG233500 Rh3DG233600 Rh5AG043100 Rh5CG026000 Rh5CG047700 Rh5CG047800 Rh5CG047900 Rh5CG048000 Rh5CG048100 Rh5CG048300 Rh5CG056500 Rh5CG340500 Rh5CG340700 Rh5CG340800 Rh7AG365000
rosa_wichuraiana Rw0G002360 Rw0G002370 Rw0G012520 Rw0G018230 Rw0G019190 Rw2G027480 Rw2G029150 Rw3G005520 Rw3G005880 Rw3G005890 Rw3G018840 Rw3G018850 Rw3G018870 Rw3G018880 Rw3G020740 Rw5G002190 Rw5G004180 Rw5G004190 Rw5G004890 Rw5G013960 Rw5G014000 Rw5G028610 Rw7G030910 Rw7G030920

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 1 cut(s) 164
AfaI GTAC 3 cut(s) 115, 419, 472
AfiI CCNNNNNNNGG 3 cut(s) 77, 78, 179
AgsI TTSAA 1 cut(s) 359
AjnI CCWGG 2 cut(s) 172, 178
AluBI AGCT 1 cut(s) 427
AluI AGCT 1 cut(s) 427
AlwI GGATC 1 cut(s) 164
AoxI GGCC 2 cut(s) 176, 182
Asp700I GAANNNNTTC 1 cut(s) 331
AspS9I GGNCC 3 cut(s) 82, 176, 182
AsuC2I CCSGG 1 cut(s) 72
AvaII GGWCC 1 cut(s) 82
BccI CCATC 2 cut(s) 263, 397
BciT130I CCWGG 2 cut(s) 174, 180
BcnI CCSGG 1 cut(s) 72
BfaI CTAG 2 cut(s) 32, 186
BglII AGATCT 1 cut(s) 436
BmcAI AGTACT 1 cut(s) 115
Bme1390I CCNGG 3 cut(s) 72, 174, 180
Bme18I GGWCC 1 cut(s) 82
BmgT120I GGNCC 3 cut(s) 82, 176, 182
BmiI GGNNCC 1 cut(s) 83
BmrFI CCNGG 3 cut(s) 72, 174, 180
BmrI ACTGGG 2 cut(s) 36, 87
BmsI GCATC 1 cut(s) 226
BmuI ACTGGG 2 cut(s) 36, 87
BpuMI CCSGG 1 cut(s) 72
BsaJI CCNNGG 3 cut(s) 70, 173, 179
Bsc4I CCNNNNNNNGG 3 cut(s) 77, 78, 179
Bse1I ACTGG 2 cut(s) 31, 82
Bse3DI GCAATG 1 cut(s) 492
BseBI CCWGG 2 cut(s) 174, 180
BseDI CCNNGG 3 cut(s) 70, 173, 179
BseLI CCNNNNNNNGG 3 cut(s) 77, 78, 179
BseMI GCAATG 1 cut(s) 492
BseMII CTCAG 1 cut(s) 337
BseNI ACTGG 2 cut(s) 31, 82
BshFI GGCC 2 cut(s) 178, 184
BsiSI CCGG 1 cut(s) 72
BslFI GGGAC 1 cut(s) 95
BslI CCNNNNNNNGG 3 cut(s) 77, 78, 179
BsmFI GGGAC 1 cut(s) 95
BsmI GAATGC 1 cut(s) 460
BsnI GGCC 2 cut(s) 178, 184
Bsp1407I TGTACA 1 cut(s) 417
Bsp143I GATC 3 cut(s) 106, 169, 436
BspANI GGCC 2 cut(s) 178, 184
BspCNI CTCAG 1 cut(s) 336
BspLI GGNNCC 1 cut(s) 83
BspPI GGATC 1 cut(s) 164
BsrDI GCAATG 1 cut(s) 492
BsrGI TGTACA 1 cut(s) 417
BsrI ACTGG 2 cut(s) 31, 82
BssECI CCNNGG 3 cut(s) 70, 173, 179
BssMI GATC 3 cut(s) 106, 169, 436
Bst2UI CCWGG 2 cut(s) 174, 180
Bst4CI ACNGT 1 cut(s) 463
BstAUI TGTACA 1 cut(s) 417
BstC8I GCNNGC 1 cut(s) 483
BstDEI CTNAG 1 cut(s) 323
BstKTI GATC 3 cut(s) 109, 172, 439
BstMBI GATC 3 cut(s) 106, 169, 436
BstMWI GCNNNNNNNGC 1 cut(s) 491
BstNI CCWGG 2 cut(s) 174, 180
BstNSI RCATGY 1 cut(s) 297
BstSCI CCNGG 3 cut(s) 70, 172, 178
BstX2I RGATCY 1 cut(s) 436
BstYI RGATCY 1 cut(s) 436
BsuRI GGCC 2 cut(s) 178, 184
BtsI GCAGTG 1 cut(s) 339
BtsIMutI CAGTG 1 cut(s) 339
Cac8I GCNNGC 1 cut(s) 483
Cfr13I GGNCC 3 cut(s) 82, 176, 182
Csp6I GTAC 3 cut(s) 114, 418, 471
CviAII CATG 1 cut(s) 294
CviJI RGCY 5 cut(s) 31, 97, 178, 184, 427
CviKI_1 RGCY 5 cut(s) 31, 97, 178, 184, 427
CviQI GTAC 3 cut(s) 114, 418, 471
DdeI CTNAG 1 cut(s) 323
DpnI GATC 3 cut(s) 108, 171, 438
DpnII GATC 3 cut(s) 106, 169, 436
Eco47I GGWCC 1 cut(s) 82
EcoO109I RGGNCCY 1 cut(s) 182
EcoRII CCWGG 2 cut(s) 172, 178
EcoT22I ATGCAT 1 cut(s) 299
FaeI CATG 1 cut(s) 297
FaqI GGGAC 1 cut(s) 95
FatI CATG 1 cut(s) 293
FspBI CTAG 2 cut(s) 32, 186
HaeIII GGCC 2 cut(s) 178, 184
HapII CCGG 1 cut(s) 72
Hin1II CATG 1 cut(s) 297
HincII GTYRAC 1 cut(s) 258
HindII GTYRAC 1 cut(s) 258
HinfI GANTC 2 cut(s) 263, 273
HpaII CCGG 1 cut(s) 72
Hpy166II GTNNAC 3 cut(s) 258, 418, 420
Hpy188I TCNGA 4 cut(s) 106, 111, 268, 326
Hpy188III TCNNGA 1 cut(s) 203
Hpy8I GTNNAC 3 cut(s) 258, 418, 420
HpyAV CCTTC 1 cut(s) 359
HpyCH4III ACNGT 1 cut(s) 463
HpyCH4IV ACGT 2 cut(s) 254, 444
HpyCH4V TGCA 6 cut(s) 239, 297, 339, 344, 458, 485
HpyF10VI GCNNNNNNNGC 1 cut(s) 491
HpyF3I CTNAG 1 cut(s) 323
HpySE526I ACGT 2 cut(s) 254, 444
Hsp92II CATG 1 cut(s) 297
Kzo9I GATC 3 cut(s) 106, 169, 436
LpnPI CCDG 7 cut(s) 12, 63, 85, 159, 165, 186, 192
LweI GCATC 1 cut(s) 226
MaeI CTAG 2 cut(s) 32, 186
MaeII ACGT 2 cut(s) 254, 444
MaeIII GTNAC 2 cut(s) 57, 193
MalI GATC 3 cut(s) 108, 171, 438
MboI GATC 3 cut(s) 106, 169, 436
MflI RGATCY 1 cut(s) 436
MluCI AATT 6 cut(s) 16, 226, 240, 278, 288, 328
MlyI GAGTC 1 cut(s) 267
MnlI CCTC 3 cut(s) 130, 199, 332
Mph1103I ATGCAT 1 cut(s) 299
MroXI GAANNNNTTC 1 cut(s) 331
MseI TTAA 2 cut(s) 44, 281
MslI CAYNNNNRTG 2 cut(s) 302, 413
MspI CCGG 1 cut(s) 72
MspR9I CCNGG 3 cut(s) 72, 174, 180
Mva1269I GAATGC 1 cut(s) 460
MvaI CCWGG 2 cut(s) 174, 180
MwoI GCNNNNNNNGC 1 cut(s) 491
NciI CCSGG 1 cut(s) 72
NdeII GATC 3 cut(s) 106, 169, 436
NlaIII CATG 1 cut(s) 297
NlaIV GGNNCC 1 cut(s) 83
NmuCI GTSAC 2 cut(s) 57, 193
NsiI ATGCAT 1 cut(s) 299
NspI RCATGY 1 cut(s) 297
PcsI WCGNNNNNNNCGW 1 cut(s) 251
PctI GAATGC 1 cut(s) 460
PdmI GAANNNNTTC 1 cut(s) 331
PfeI GAWTC 1 cut(s) 263
PleI GAGTC 1 cut(s) 267
PpsI GAGTC 1 cut(s) 267
Psp6I CCWGG 2 cut(s) 172, 178
PspGI CCWGG 2 cut(s) 172, 178
PspN4I GGNNCC 1 cut(s) 83
PspPI GGNCC 3 cut(s) 82, 176, 182
PsuI RGATCY 1 cut(s) 436
RsaI GTAC 3 cut(s) 115, 419, 472
RsaNI GTAC 3 cut(s) 114, 418, 471
RseI CAYNNNNRTG 2 cut(s) 302, 413
SaqAI TTAA 2 cut(s) 44, 281
Sau3AI GATC 3 cut(s) 106, 169, 436
Sau96I GGNCC 3 cut(s) 82, 176, 182
ScaI AGTACT 1 cut(s) 115
SchI GAGTC 1 cut(s) 267
ScrFI CCNGG 3 cut(s) 72, 174, 180
SetI ASST 7 cut(s) 92, 122, 148, 257, 429, 447, 472
SfaNI GCATC 1 cut(s) 226
SinI GGWCC 1 cut(s) 82
SmiMI CAYNNNNRTG 2 cut(s) 302, 413
Sse9I AATT 6 cut(s) 16, 226, 240, 278, 288, 328
SspI AATATT 2 cut(s) 131, 158
SspMI CTAG 2 cut(s) 32, 186
StyD4I CCNGG 3 cut(s) 70, 172, 178
TaaI ACNGT 1 cut(s) 463
TaiI ACGT 2 cut(s) 257, 447
TasI AATT 6 cut(s) 16, 226, 240, 278, 288, 328
TatI WGTACW 2 cut(s) 113, 417
TfiI GAWTC 1 cut(s) 263
Tru1I TTAA 2 cut(s) 44, 281
Tru9I TTAA 2 cut(s) 44, 281
TscAI CASTG 1 cut(s) 346
TseFI GTSAC 2 cut(s) 57, 193
Tsp45I GTSAC 2 cut(s) 57, 193
TspDTI ATGAA 3 cut(s) 17, 89, 378
TspRI CASTG 1 cut(s) 346
VpaK11BI GGWCC 1 cut(s) 82
XceI RCATGY 1 cut(s) 297
XmnI GAANNNNTTC 1 cut(s) 331
XspI CTAG 2 cut(s) 32, 186
ZrmI AGTACT 1 cut(s) 115
Zsp2I ATGCAT 1 cut(s) 299
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.