RLG00000010193

serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr2
Physical Location & Seq
Forward (+)
63997355 .. 63998374
1020 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000010193

Sequence Viewer

Length: 714 bp
ATGCTAGTCCTGGAATACATGCCGAACAAGAGCTTGGACTCGTTTCTTTTTGGTAACACAAGAAGGTCTTTAGATTGGCAAAAGCGCTTTGAGATCATCAACGGGGTTGCTCGTGGTATCTTATATCTTCACCAAGATTCTAGACTGAGGATCATTCATAGGGATCTCAAGACTAGCAATGTTCTTCTAGACGCCGACATGAAGCCAAAAATTTCAGATTTCGGCATGGCAAGACTAATCCATGGGGACCAACTGCAGAATAGAACGAACAAAACTGCTGGAACATTTGGTTACATAGCACCAGAATATGCAAACTTCGGACAATTTTCAACAAAATCTGATGTCTATAGTTTCGGGATCATAGTATTGGAGATTGTAAGCGGCAAGAAGAACAGTAGCTCTTATTGGGATTCCACGTACTTGGTACAACATGCATGGGAGCTTTGGAAAGAAGACAGAGCCTTAGAATTGGTGGATTCATCTCTACAGTCCTATCAGCCAGATGAAGTCCACAGATGTATTCATGTTGGTCTTTTGTGTGTGGAAGACGATTCAGAAAACCGACCGGCCATGTCAGATGTTACTTTTATGTTATGTAGTGAGTCATCTCTTCCTTCTCCCATGCAGCCTGCATTTGGCTTCAACATGGGTTCCAGAAATACTCTTGATCCGTCAAACAACGACTTGAGTATAACTGAAATGGAAGGGCGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

238

Amino Acids

27.0

Weight (kDa)

5.37

Isoelectric Point (pI)

49.19

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PK_Tyr_Ser-Thr PF07714 1 - 195 1.3e-34 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 1 - 139 1.4e-29 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000112)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g03320 FvH4_3g03322 FvH4_3g03323 FvH4_3g03340 FvH4_3g03350 FvH4_3g03351 FvH4_3g03370 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g06140 FvH4_6g00257 FvH4_6g00257 FvH4_6g00270 FvH4_6g00300 FvH4_6g20800 FvH4_6g20800 FvH4_6g20800 FvH4_6g20800 FvH4_6g20800
malus_domestica MD05G1232700.v1.1 MD05G1327700.v1.1 MD05G1327800.v1.1 MD05G1327900.v1.1 MD05G1328000.v1.1 MD05G1328200.v1.1 MD05G1328300.v1.1 MD05G1328500.v1.1 MD05G1332000.v1.1 MD05G1332100.v1.1 MD10G1307600.v1.1 MD10G1307800.v1.1
prunus_persica Prupe.4G031900_v2.0.a1 Prupe.4G032000_v2.0.a1 Prupe.4G032000_v2.0.a1 Prupe.4G032100_v2.0.a1 Prupe.4G032200_v2.0.a1 Prupe.4G032200_v2.0.a1 Prupe.4G032200_v2.0.a1
pyrus_communis pycom05g30180 pycom05g30190 pycom05g30200 pycom05g30210 pycom10g25920 pycom10g25930
rosa_chinensis RchiOBHm_Chr2g0130831 RchiOBHm_Chr2g0132531 RchiOBHm_Chr2g0132541 RchiOBHm_Chr3g0455681 RchiOBHm_Chr3g0476681 RchiOBHm_Chr3g0476761 RchiOBHm_Chr3g0476771 RchiOBHm_Chr3g0476791 RchiOBHm_Chr3g0476801 RchiOBHm_Chr3g0476811 RchiOBHm_Chr4g0413551 RchiOBHm_Chr4g0413561 RchiOBHm_Chr5g0002911 RchiOBHm_Chr5g0005071 RchiOBHm_Chr5g0005101 RchiOBHm_Chr5g0005111 RchiOBHm_Chr5g0005121 RchiOBHm_Chr5g0005131 RchiOBHm_Chr5g0005141 RchiOBHm_Chr5g0005161 RchiOBHm_Chr5g0005171 RchiOBHm_Chr5g0006341 RchiOBHm_Chr5g0046161 RchiOBHm_Chr5g0046171 RchiOBHm_Chr5g0046181 RchiOBHm_Chr5g0046221 RchiOBHm_Chr5g0046231 RchiOBHm_Chr7g0224061 RchiOBHm_Chr7g0224081 RchiOBHm_Chr7g0224101 RchiOBHm_Chr7g0224111 RchiOBHm_Chr7g0224121
rosa_laevigata RLG00000010193 RLG00000019146 RLG00000019148 RLG00000019149 RLG00000019150 RLG00000023750 RLG00000023751 RLG00000023753 RLG00000029486 RLG00000031068 RLG00000031069 RLG00000031284 RLG00000031285 RLG00000031286 RLG00000031289 RLG00000031290 RLG00000031291 RLG00000031292 RLG00000031293 RLG00000031294 RLG00000031295 RLG00000031296 RLG00000031297 RLG00000031363 RLG00000032618 RLG00000032619
rosa_multiflora Rmu_co8147584.1_g000001 Rmu_co8205828.1_g000001 Rmu_co8373645.1_g000001 Rmu_co8407679.1_g000001 Rmu_co8452561.1_g000001 Rmu_sc0001035.1_g000076 Rmu_sc0001884.1_g000026 Rmu_sc0001884.1_g000027 Rmu_sc0001884.1_g000035 Rmu_sc0002157.1_g000026 Rmu_sc0002399.1_g000006 Rmu_sc0002399.1_g000007 Rmu_sc0002883.1_g000010 Rmu_sc0003629.1_g000014 Rmu_sc0003884.1_g000004 Rmu_sc0007865.1_g000005 Rmu_sc0008085.1_g000013 Rmu_sc0008085.1_g000014 Rmu_sc0008085.1_g000016 Rmu_sc0008085.1_g000018 Rmu_sc0008432.1_g000004 Rmu_sc0008714.1_g000002 Rmu_sc0009296.1_g000008 Rmu_sc0009296.1_g000009 Rmu_sc0009296.1_g000011 Rmu_sc0010281.1_g000001 Rmu_sc0010281.1_g000002 Rmu_sc0010714.1_g000011 Rmu_sc0010714.1_g000016 Rmu_sc0011169.1_g000001 Rmu_sc0011169.1_g000007 Rmu_sc0013603.1_g000006 Rmu_sc0020478.1_g000003 Rmu_sc0020478.1_g000007 Rmu_sc0025106.1_g000012 Rmu_sc0032709.1_g000001 Rmu_sc0033028.1_g000001
rosa_roxburghii Rroxscaffold_1G00069570 Rroxscaffold_1G00069610 Rroxscaffold_1G00069620 Rroxscaffold_1G00070480 Rroxscaffold_1G00070490 Rroxscaffold_1G00070500 Rroxscaffold_1G00070510 Rroxscaffold_1G00070520 Rroxscaffold_1G00070530 Rroxscaffold_1G00070540 Rroxscaffold_1G00070550 Rroxscaffold_1G00070590 Rroxscaffold_1G00072950 Rroxscaffold_1G00073080 Rroxscaffold_2G00111810 Rroxscaffold_2G00111820 Rroxscaffold_2G00113530 Rroxscaffold_2G00113870 Rroxscaffold_6G00405010 Rroxscaffold_6G00405020 Rroxscaffold_6G00423590 Rroxscaffold_6G00424100
rosa_rugosa Rorug02G0293200 Rorug02G0293300 Rorug02G0293400 Rorug02G0305900 Rorug02G0305900 Rorug03G0009100 Rorug03G0157000 Rorug03G0157000 Rorug03G0304900 Rorug04G0400500 Rorug04G0415200 Rorug04G0415300 Rorug04G0415400 Rorug04G0415500 Rorug04G0421100 Rorug05G0068000 Rorug05G0068100 Rorug05G0068200 Rorug05G0068500 Rorug05G0224600 Rorug05G0224700
rosa_samantha Rh2CG331700 Rh2CG341600 Rh2CG341700 Rh2DG381200 Rh3DG071200 Rh3DG233400 Rh3DG233500 Rh3DG233600 Rh5AG043100 Rh5CG026000 Rh5CG047700 Rh5CG047800 Rh5CG047900 Rh5CG048000 Rh5CG048100 Rh5CG048300 Rh5CG056500 Rh5CG340500 Rh5CG340700 Rh5CG340800 Rh7AG365000
rosa_wichuraiana Rw0G002360 Rw0G002370 Rw0G012520 Rw0G018230 Rw0G019190 Rw2G027480 Rw2G029150 Rw3G005520 Rw3G005880 Rw3G005890 Rw3G018840 Rw3G018850 Rw3G018870 Rw3G018880 Rw3G020740 Rw5G002190 Rw5G004180 Rw5G004190 Rw5G004890 Rw5G013960 Rw5G014000 Rw5G028610 Rw7G030910 Rw7G030920

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 381
AclWI GGATC 4 cut(s) 158, 171, 365, 662
AcoI YGGCCR 1 cut(s) 567
AcsI RAATTY 1 cut(s) 210
AcyI GRCGYC 1 cut(s) 192
AfaI GTAC 2 cut(s) 419, 426
AfeI AGCGCT 1 cut(s) 86
AfiI CCNNNNNNNGG 1 cut(s) 635
AgsI TTSAA 2 cut(s) 330, 643
AjnI CCWGG 1 cut(s) 9
AjuI GAANNNNNNNTTGG 2 cut(s) 17, 49
AluBI AGCT 3 cut(s) 33, 399, 442
AluI AGCT 3 cut(s) 33, 399, 442
AlwI GGATC 4 cut(s) 158, 171, 365, 662
Aor51HI AGCGCT 1 cut(s) 86
AoxI GGCC 1 cut(s) 567
ApeKI GCWGC 1 cut(s) 625
ApoI RAATTY 1 cut(s) 210
AspLEI GCGC 1 cut(s) 87
AspS9I GGNCC 1 cut(s) 247
AsuHPI GGTGA 1 cut(s) 122
AvaII GGWCC 1 cut(s) 247
BauI CACGAG 1 cut(s) 111
BbsI GAAGAC 2 cut(s) 459, 552
BbvI GCAGC 1 cut(s) 637
BciT130I CCWGG 1 cut(s) 11
BfaI CTAG 4 cut(s) 5, 141, 174, 188
BfmI CTRYAG 3 cut(s) 254, 346, 485
BfoI RGCGCY 1 cut(s) 88
BisI GCNGC 2 cut(s) 382, 626
BlsI GCNGC 2 cut(s) 383, 627
Bme1390I CCNGG 1 cut(s) 11
Bme18I GGWCC 1 cut(s) 247
BmgT120I GGNCC 1 cut(s) 247
BmiI GGNNCC 2 cut(s) 248, 652
BmrFI CCNGG 1 cut(s) 11
BpiI GAAGAC 2 cut(s) 459, 552
BpuEI CTTGAG 2 cut(s) 152, 706
BsaAI YACGTR 1 cut(s) 417
BsaHI GRCGYC 1 cut(s) 192
BsaJI CCNNGG 1 cut(s) 241
Bsc4I CCNNNNNNNGG 1 cut(s) 635
Bse118I RCCGGY 1 cut(s) 565
Bse3DI GCAATG 1 cut(s) 184
BseBI CCWGG 1 cut(s) 11
BseDI CCNNGG 1 cut(s) 241
BseLI CCNNNNNNNGG 1 cut(s) 635
BseMI GCAATG 1 cut(s) 184
BseMII CTCAG 1 cut(s) 137
BseXI GCAGC 1 cut(s) 637
Bsh1285I CGRYCG 1 cut(s) 566
BshFI GGCC 1 cut(s) 569
BsiEI CGRYCG 1 cut(s) 566
BsiSI CCGG 1 cut(s) 566
BslFI GGGAC 1 cut(s) 260
BslI CCNNNNNNNGG 1 cut(s) 635
BsmFI GGGAC 1 cut(s) 260
BsnI GGCC 1 cut(s) 569
Bsp143I GATC 5 cut(s) 93, 150, 163, 357, 667
Bsp19I CCATGG 1 cut(s) 241
BspACI CCGC 1 cut(s) 381
BspANI GGCC 1 cut(s) 569
BspCNI CTCAG 1 cut(s) 138
BspLI GGNNCC 2 cut(s) 248, 652
BspMAI CTGCAG 1 cut(s) 258
BspPI GGATC 4 cut(s) 158, 171, 365, 662
BsrDI GCAATG 1 cut(s) 184
BsrFI RCCGGY 1 cut(s) 565
BssAI RCCGGY 1 cut(s) 565
BssECI CCNNGG 1 cut(s) 241
BssMI GATC 5 cut(s) 93, 150, 163, 357, 667
BssNI GRCGYC 1 cut(s) 192
BssSI CACGAG 1 cut(s) 111
BssT1I CCWWGG 1 cut(s) 241
Bst2BI CACGAG 1 cut(s) 111
Bst2UI CCWGG 1 cut(s) 11
Bst4CI ACNGT 2 cut(s) 395, 489
Bst6I CTCTTC 1 cut(s) 615
BstACI GRCGYC 1 cut(s) 192
BstBAI YACGTR 1 cut(s) 417
BstC8I GCNNGC 1 cut(s) 630
BstDEI CTNAG 2 cut(s) 146, 463
BstDSI CCRYGG 1 cut(s) 241
BstH2I RGCGCY 1 cut(s) 88
BstHHI GCGC 1 cut(s) 87
BstKTI GATC 5 cut(s) 96, 153, 166, 360, 670
BstMBI GATC 5 cut(s) 93, 150, 163, 357, 667
BstMCI CGRYCG 1 cut(s) 566
BstNI CCWGG 1 cut(s) 11
BstNSI RCATGY 2 cut(s) 22, 434
BstSCI CCNGG 1 cut(s) 9
BstSFI CTRYAG 3 cut(s) 254, 346, 485
BstV1I GCAGC 1 cut(s) 637
BstV2I GAAGAC 2 cut(s) 459, 552
BstX2I RGATCY 1 cut(s) 163
BstXI CCANNNNNNTGG 1 cut(s) 421
BstYI RGATCY 1 cut(s) 163
BsuRI GGCC 1 cut(s) 569
BtgI CCRYGG 1 cut(s) 241
Cac8I GCNNGC 1 cut(s) 630
CfoI GCGC 1 cut(s) 87
Cfr10I RCCGGY 1 cut(s) 565
Cfr13I GGNCC 1 cut(s) 247
CseI GACGC 1 cut(s) 200
Csp6I GTAC 2 cut(s) 418, 425
CviJI RGCY 9 cut(s) 33, 205, 399, 442, 461, 499, 569, 628, 639
CviKI_1 RGCY 9 cut(s) 33, 205, 399, 442, 461, 499, 569, 628, 639
CviQI GTAC 2 cut(s) 418, 425
DdeI CTNAG 2 cut(s) 146, 463
DpnI GATC 5 cut(s) 95, 152, 165, 359, 669
DpnII GATC 5 cut(s) 93, 150, 163, 357, 667
EaeI YGGCCR 1 cut(s) 567
Eam1104I CTCTTC 1 cut(s) 615
EarI CTCTTC 1 cut(s) 615
Eco130I CCWWGG 1 cut(s) 241
Eco47I GGWCC 1 cut(s) 247
Eco47III AGCGCT 1 cut(s) 86
EcoRII CCWGG 1 cut(s) 9
EcoT14I CCWWGG 1 cut(s) 241
EcoT22I ATGCAT 1 cut(s) 436
ErhI CCWWGG 1 cut(s) 241
FalI AAGNNNNNCTT 2 cut(s) 52, 84
FaqI GGGAC 1 cut(s) 260
Fnu4HI GCNGC 2 cut(s) 382, 626
Fsp4HI GCNGC 2 cut(s) 382, 626
FspBI CTAG 4 cut(s) 5, 141, 174, 188
GlaI GCGC 1 cut(s) 86
GluI GCNGC 2 cut(s) 382, 626
HaeII RGCGCY 1 cut(s) 88
HaeIII GGCC 1 cut(s) 569
HapII CCGG 1 cut(s) 566
HgaI GACGC 1 cut(s) 200
HhaI GCGC 1 cut(s) 87
Hin1I GRCGYC 1 cut(s) 192
Hin6I GCGC 1 cut(s) 85
HinP1I GCGC 1 cut(s) 85
HinfI GANTC 6 cut(s) 38, 137, 410, 476, 551, 602
HpaII CCGG 1 cut(s) 566
HphI GGTGA 1 cut(s) 122
Hpy166II GTNNAC 1 cut(s) 511
Hpy188I TCNGA 5 cut(s) 217, 320, 340, 556, 577
Hpy188III TCNNGA 6 cut(s) 141, 169, 188, 355, 654, 665
Hpy8I GTNNAC 1 cut(s) 511
HpyAV CCTTC 3 cut(s) 57, 624, 698
HpyCH4III ACNGT 2 cut(s) 395, 489
HpyCH4IV ACGT 1 cut(s) 416
HpyCH4V TGCA 5 cut(s) 256, 311, 434, 625, 632
HpyF3I CTNAG 2 cut(s) 146, 463
HpySE526I ACGT 1 cut(s) 416
Hsp92I GRCGYC 1 cut(s) 192
HspAI GCGC 1 cut(s) 85
Kzo9I GATC 5 cut(s) 93, 150, 163, 357, 667
LmnI GCTCC 1 cut(s) 439
LpnPI CCDG 7 cut(s) 23, 264, 315, 513, 579, 642, 667
Lsp1109I GCAGC 1 cut(s) 637
MaeI CTAG 4 cut(s) 5, 141, 174, 188
MaeII ACGT 1 cut(s) 416
MaeIII GTNAC 3 cut(s) 53, 290, 580
MalI GATC 5 cut(s) 95, 152, 165, 359, 669
MboI GATC 5 cut(s) 93, 150, 163, 357, 667
MboII GAAGA 6 cut(s) 119, 176, 400, 464, 557, 602
MflI RGATCY 1 cut(s) 163
MluCI AATT 3 cut(s) 210, 323, 467
MlyI GAGTC 2 cut(s) 32, 611
MnlI CCTC 1 cut(s) 141
Mph1103I ATGCAT 1 cut(s) 436
MspI CCGG 1 cut(s) 566
MspR9I CCNGG 1 cut(s) 11
MvaI CCWGG 1 cut(s) 11
NcoI CCATGG 1 cut(s) 241
NdeII GATC 5 cut(s) 93, 150, 163, 357, 667
NlaIV GGNNCC 2 cut(s) 248, 652
NsiI ATGCAT 1 cut(s) 436
NspI RCATGY 2 cut(s) 22, 434
PfeI GAWTC 4 cut(s) 137, 410, 476, 551
PfoI TCCNGGA 1 cut(s) 9
PkrI GCNGC 2 cut(s) 383, 627
PleI GAGTC 2 cut(s) 32, 610
PpsI GAGTC 2 cut(s) 32, 610
Ppu21I YACGTR 1 cut(s) 417
Psp6I CCWGG 1 cut(s) 9
PspGI CCWGG 1 cut(s) 9
PspN4I GGNNCC 2 cut(s) 248, 652
PspPI GGNCC 1 cut(s) 247
PstI CTGCAG 1 cut(s) 258
PsuI RGATCY 1 cut(s) 163
RsaI GTAC 2 cut(s) 419, 426
RsaNI GTAC 2 cut(s) 418, 425
SatI GCNGC 2 cut(s) 382, 626
Sau3AI GATC 5 cut(s) 93, 150, 163, 357, 667
Sau96I GGNCC 1 cut(s) 247
SchI GAGTC 2 cut(s) 32, 611
ScrFI CCNGG 1 cut(s) 11
SetI ASST 5 cut(s) 35, 68, 401, 419, 444
SfcI CTRYAG 3 cut(s) 254, 346, 485
SinI GGWCC 1 cut(s) 247
SmlI CTYRAG 2 cut(s) 167, 685
SmoI CTYRAG 2 cut(s) 167, 685
Sse9I AATT 3 cut(s) 210, 323, 467
SsiI CCGC 1 cut(s) 381
SspMI CTAG 4 cut(s) 5, 141, 174, 188
StyD4I CCNGG 1 cut(s) 9
StyI CCWWGG 1 cut(s) 241
TaaI ACNGT 2 cut(s) 395, 489
TaiI ACGT 1 cut(s) 419
TasI AATT 3 cut(s) 210, 323, 467
TauI GCSGC 1 cut(s) 384
TfiI GAWTC 4 cut(s) 137, 410, 476, 551
TseI GCWGC 1 cut(s) 625
TspDTI ATGAA 5 cut(s) 146, 215, 468, 512, 519
TspGWI ACGGA 1 cut(s) 660
VpaK11BI GGWCC 1 cut(s) 247
XapI RAATTY 1 cut(s) 210
XbaI TCTAGA 2 cut(s) 140, 187
XceI RCATGY 2 cut(s) 22, 434
XspI CTAG 4 cut(s) 5, 141, 174, 188
Zsp2I ATGCAT 1 cut(s) 436
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.