Rmu_sc0008085.1_g000016

serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0008085.1
OG0000112
Physical Location & Seq
Forward (+)
47771 .. 51237
3467 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0008085.1_g000016.1.cds

Sequence Viewer

Length: 2589 bp
atgctgttgaaatctctgcttctcttcctcctcttccaagtttgcacttccagggacaccttgagatcgaacgaagaactcaaggatgatgatggtggacttctggtgtccaaagaaagcagctttgagttgggtttcttcagccctggaaattctagcaaccgctatgttgggatttggtattctcaatctaaagtatctgaaaaaacagtggtgtggatcgcaaacagagacaaccccatcaatgatacctctggagttttcaccataaacaggtatggagacctagttctttatgcttataacatggagaccagtcctatttggtctgcagatgtgccttattcagtcaaaaacactggcaccttatctgcgtatgtacagctgttggatacaggaaacttagttatgttccagaatgatagagacggaatctttgtatggcaaagttttgattatcctacagatactttaatccctggtatgaaagttgggatgaatcggaaaactgggctagaatgggttttaacatcttggaagtcagcttataacatggagaccagtcctatatggtctgcagatgcgtctctttcagtcaaaaacaccagcaccttatctgcatatgtacagcttttggatacaggaaacttagttatgttccagaatgatagagacggaatctttgtatggcaaagttttgattatcctacagatactttaatccctggtatgaaagttgggatgaatcggaaaactgggctagaatgggttttaacatcttggaagtcactagatgaccctggaactggggactatacctttaggcttcataataggggccacattttcacaccccagtcttttatttataaaggtttgtctaagtattggcgaggtgatacagagccttggcctaattcgatccgaaatgcagaggaaatgtcttttttccttacctataacaccaataaacttacaataatgaagttgatgttttctgggctacatcagcacttggtatggagtgatgctgaccatcaatggaaggagttgtggtcttcaccgaaatacaggtgtgactggtatggacattgtggtgccaacagcaaatgtagccttgacagtggtaatctgttcgagtgtgagtgtctaccggggtatgaaccaaaatctataaatggttggaatgggagagatgggtcagatggatgtgtgagtaaacgagtcaaagtgtcaaagtgtagaaatggagaagggtttgtgaaggtggaaagggtgaaagatccagacgcatcgagagcagcattgttgaaaagaggtatgagtaccaaagagtgtgagcaggagtgcctaagaaattgttcttgcacggcatatgtgaccaaaaagattgaaggggttgttaattgcttgacatggtatgatgacttgatggacattttggtttacacagaggccggacgagatctgtatgttcgtgtggataaaattgagttagtactaataaatgtgattgcctgttggttgcttaagaaaaaagggaagacaaaagtctttgtggaggtggatgaacttgaggaaagcaagagatacccggaattgcaattttttgatctgaacacactagtagcagccacagataatttctctggtgttaataaacttggcgaaggtggttttggtggtgtttataagggtgagttaccaaatggacagaaggttgctgtgaaaaggctgtctagcagctcaggacaaggggttggtgaattcaaaaatgaagttgaactgatagcaggacttcaacacaggaatcttgtgaagcttttaggttgctgtataaagggaggagaaaggatgctagtcctcgaatatatgccgaacaaaagcttggactcatttctttttgataacacaagaaagtccttcttagattggggaaggcgttttgaaattatcaatggggttgctcgtgggcttttgtatcttcaccaagactcgagattaaggattattcatagggatctaaaaaccagcaatattcttctagatgatgagatgaccccaaaaatttcagattttggcagggcaagaatattccatagggaccaacttcacgataacacaaacaaagttgttggaacatttggctacatgtcaccagagtatgcagtgtttggaagattctctacgaaatcggatgtgttcagttttgggattgtactattggagattgttagtggcaagagaaacaatggttcttatgaggagaaatactccatgaacctgataggacatgtttggcatgtgtggaaagaaggaatagccttagatattgtggattcatcgctacaatcatataagcatgatgaagtcttgagatgcattcaaattggactgttgtgcgtgcaagaagattccaaggaccggccagccatgtcatccgttgtgttcatgttgagtggtgtggcatctcttccatctcctaagcagcctgcatttgtcttcagaagaaattccagcagtgctgctgattcaaaagaattgcattctattaacgacttaacaataactattgtgggagctcgataa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
B_lectin DUF3403 PAN_2 Pkinase Pkinase_Tyr S_locus_glycop

Protein Analysis

862

Amino Acids

97.54

Weight (kDa)

6.75

Isoelectric Point (pI)

35.59

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000112)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g03320 FvH4_3g03322 FvH4_3g03323 FvH4_3g03340 FvH4_3g03350 FvH4_3g03351 FvH4_3g03370 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g06140 FvH4_6g00257 FvH4_6g00257 FvH4_6g00270 FvH4_6g00300 FvH4_6g20800 FvH4_6g20800 FvH4_6g20800 FvH4_6g20800 FvH4_6g20800
malus_domestica MD05G1232700.v1.1 MD05G1327700.v1.1 MD05G1327800.v1.1 MD05G1327900.v1.1 MD05G1328000.v1.1 MD05G1328200.v1.1 MD05G1328300.v1.1 MD05G1328500.v1.1 MD05G1332000.v1.1 MD05G1332100.v1.1 MD10G1307600.v1.1 MD10G1307800.v1.1
prunus_persica Prupe.4G031900_v2.0.a1 Prupe.4G032000_v2.0.a1 Prupe.4G032000_v2.0.a1 Prupe.4G032100_v2.0.a1 Prupe.4G032200_v2.0.a1 Prupe.4G032200_v2.0.a1 Prupe.4G032200_v2.0.a1
pyrus_communis pycom05g30180 pycom05g30190 pycom05g30200 pycom05g30210 pycom10g25920 pycom10g25930
rosa_chinensis RchiOBHm_Chr2g0130831 RchiOBHm_Chr2g0132531 RchiOBHm_Chr2g0132541 RchiOBHm_Chr3g0455681 RchiOBHm_Chr3g0476681 RchiOBHm_Chr3g0476761 RchiOBHm_Chr3g0476771 RchiOBHm_Chr3g0476791 RchiOBHm_Chr3g0476801 RchiOBHm_Chr3g0476811 RchiOBHm_Chr4g0413551 RchiOBHm_Chr4g0413561 RchiOBHm_Chr5g0002911 RchiOBHm_Chr5g0005071 RchiOBHm_Chr5g0005101 RchiOBHm_Chr5g0005111 RchiOBHm_Chr5g0005121 RchiOBHm_Chr5g0005131 RchiOBHm_Chr5g0005141 RchiOBHm_Chr5g0005161 RchiOBHm_Chr5g0005171 RchiOBHm_Chr5g0006341 RchiOBHm_Chr5g0046161 RchiOBHm_Chr5g0046171 RchiOBHm_Chr5g0046181 RchiOBHm_Chr5g0046221 RchiOBHm_Chr5g0046231 RchiOBHm_Chr7g0224061 RchiOBHm_Chr7g0224081 RchiOBHm_Chr7g0224101 RchiOBHm_Chr7g0224111 RchiOBHm_Chr7g0224121
rosa_laevigata RLG00000010193 RLG00000019146 RLG00000019148 RLG00000019149 RLG00000019150 RLG00000023750 RLG00000023751 RLG00000023753 RLG00000029486 RLG00000031068 RLG00000031069 RLG00000031284 RLG00000031285 RLG00000031286 RLG00000031289 RLG00000031290 RLG00000031291 RLG00000031292 RLG00000031293 RLG00000031294 RLG00000031295 RLG00000031296 RLG00000031297 RLG00000031363 RLG00000032618 RLG00000032619
rosa_multiflora Rmu_co8147584.1_g000001 Rmu_co8205828.1_g000001 Rmu_co8373645.1_g000001 Rmu_co8407679.1_g000001 Rmu_co8452561.1_g000001 Rmu_sc0001035.1_g000076 Rmu_sc0001884.1_g000026 Rmu_sc0001884.1_g000027 Rmu_sc0001884.1_g000035 Rmu_sc0002157.1_g000026 Rmu_sc0002399.1_g000006 Rmu_sc0002399.1_g000007 Rmu_sc0002883.1_g000010 Rmu_sc0003629.1_g000014 Rmu_sc0003884.1_g000004 Rmu_sc0007865.1_g000005 Rmu_sc0008085.1_g000013 Rmu_sc0008085.1_g000014 Rmu_sc0008085.1_g000016 Rmu_sc0008085.1_g000018 Rmu_sc0008432.1_g000004 Rmu_sc0008714.1_g000002 Rmu_sc0009296.1_g000008 Rmu_sc0009296.1_g000009 Rmu_sc0009296.1_g000011 Rmu_sc0010281.1_g000001 Rmu_sc0010281.1_g000002 Rmu_sc0010714.1_g000011 Rmu_sc0010714.1_g000016 Rmu_sc0011169.1_g000001 Rmu_sc0011169.1_g000007 Rmu_sc0013603.1_g000006 Rmu_sc0020478.1_g000003 Rmu_sc0020478.1_g000007 Rmu_sc0025106.1_g000012 Rmu_sc0032709.1_g000001 Rmu_sc0033028.1_g000001
rosa_roxburghii Rroxscaffold_1G00069570 Rroxscaffold_1G00069610 Rroxscaffold_1G00069620 Rroxscaffold_1G00070480 Rroxscaffold_1G00070490 Rroxscaffold_1G00070500 Rroxscaffold_1G00070510 Rroxscaffold_1G00070520 Rroxscaffold_1G00070530 Rroxscaffold_1G00070540 Rroxscaffold_1G00070550 Rroxscaffold_1G00070590 Rroxscaffold_1G00072950 Rroxscaffold_1G00073080 Rroxscaffold_2G00111810 Rroxscaffold_2G00111820 Rroxscaffold_2G00113530 Rroxscaffold_2G00113870 Rroxscaffold_6G00405010 Rroxscaffold_6G00405020 Rroxscaffold_6G00423590 Rroxscaffold_6G00424100
rosa_rugosa Rorug02G0293200 Rorug02G0293300 Rorug02G0293400 Rorug02G0305900 Rorug02G0305900 Rorug03G0009100 Rorug03G0157000 Rorug03G0157000 Rorug03G0304900 Rorug04G0400500 Rorug04G0415200 Rorug04G0415300 Rorug04G0415400 Rorug04G0415500 Rorug04G0421100 Rorug05G0068000 Rorug05G0068100 Rorug05G0068200 Rorug05G0068500 Rorug05G0224600 Rorug05G0224700
rosa_samantha Rh2CG331700 Rh2CG341600 Rh2CG341700 Rh2DG381200 Rh3DG071200 Rh3DG233400 Rh3DG233500 Rh3DG233600 Rh5AG043100 Rh5CG026000 Rh5CG047700 Rh5CG047800 Rh5CG047900 Rh5CG048000 Rh5CG048100 Rh5CG048300 Rh5CG056500 Rh5CG340500 Rh5CG340700 Rh5CG340800 Rh7AG365000
rosa_wichuraiana Rw0G002360 Rw0G002370 Rw0G012520 Rw0G018230 Rw0G019190 Rw2G027480 Rw2G029150 Rw3G005520 Rw3G005880 Rw3G005890 Rw3G018840 Rw3G018850 Rw3G018870 Rw3G018880 Rw3G020740 Rw5G002190 Rw5G004180 Rw5G004190 Rw5G004890 Rw5G013960 Rw5G014000 Rw5G028610 Rw7G030910 Rw7G030920

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 4 cut(s) 303, 549, 870, 1692
AccB1I GGYRCC 2 cut(s) 362, 1097
AccI GTMKAC 1 cut(s) 1150
AciI CCGC 1 cut(s) 163
AclWI GGATC 4 cut(s) 227, 916, 1277, 2028
AcoI YGGCCR 1 cut(s) 2426
AcsI RAATTY 4 cut(s) 151, 1766, 2067, 2512
AcuI CTGAAG 2 cut(s) 124, 2488
AfaI GTAC 5 cut(s) 381, 627, 1327, 1500, 2220
AfiI CCNNNNNNNGG 3 cut(s) 273, 806, 2424
AflII CTTAAG 1 cut(s) 1529
AflIII ACRYGT 2 cut(s) 2151, 2293
AgsI TTSAA 9 cut(s) 10, 1312, 1394, 1771, 1784, 1802, 1949, 2387, 2535
AhlI ACTAGT 1 cut(s) 1624
AjnI CCWGG 5 cut(s) 50, 145, 478, 724, 799
AjuI GAANNNNNNNTTGG 4 cut(s) 1662, 1694, 1871, 1903
AloI GAACNNNNNNTCC 2 cut(s) 273, 305
AluBI AGCT 8 cut(s) 123, 385, 545, 631, 1746, 1822, 1887, 2582
AluI AGCT 8 cut(s) 123, 385, 545, 631, 1746, 1822, 1887, 2582
Alw21I GWGCWC 1 cut(s) 2584
Alw26I GTCTC 7 cut(s) 225, 276, 305, 420, 551, 591, 666
AlwI GGATC 4 cut(s) 227, 916, 1277, 2028
Ama87I CYCGRG 1 cut(s) 1996
AoxI GGCC 4 cut(s) 838, 911, 1455, 2426
ApeKI GCWGC 6 cut(s) 120, 1301, 1631, 1743, 2488, 2525
ApoI RAATTY 4 cut(s) 151, 1766, 2067, 2512
ArsI GACNNNNNNTTYG 4 cut(s) 419, 451, 665, 697
Asp700I GAANNNNTTC 2 cut(s) 1360, 2512
AspS9I GGNCC 3 cut(s) 838, 2104, 2422
AsuC2I CCSGG 2 cut(s) 1155, 1595
AsuHPI GGTGA 8 cut(s) 256, 908, 1053, 1288, 1709, 1775, 1979, 2148
AvaI CYCGRG 1 cut(s) 1996
AvaII GGWCC 2 cut(s) 2104, 2422
BanI GGYRCC 2 cut(s) 362, 1097
BanII GRGCYC 1 cut(s) 2584
BarI GAAGNNNNNNTAC 2 cut(s) 2170, 2202
BauI CACGAG 1 cut(s) 1968
BbsI GAAGAC 3 cut(s) 1050, 1550, 2494
Bbv12I GWGCWC 1 cut(s) 2584
BbvI GCAGC 6 cut(s) 132, 1313, 1643, 1755, 2500, 2512
BccI CCATC 7 cut(s) 86, 248, 1044, 1190, 1199, 1426, 2485
BceAI ACGGC 1 cut(s) 1386
BciT130I CCWGG 5 cut(s) 52, 147, 480, 726, 801
BciVI GTATCC 2 cut(s) 385, 631
BcnI CCSGG 2 cut(s) 1155, 1595
BcoDI GTCTC 7 cut(s) 225, 276, 305, 420, 551, 591, 666
BcuI ACTAGT 1 cut(s) 1624
BfaI CTAG 9 cut(s) 156, 287, 515, 761, 791, 1625, 1740, 1859, 2045
BfmI CTRYAG 4 cut(s) 330, 462, 576, 708
BfrI CTTAAG 1 cut(s) 1529
BfuI GTATCC 2 cut(s) 385, 631
BglII AGATCT 1 cut(s) 1465
BisI GCNGC 6 cut(s) 121, 1302, 1632, 1744, 2489, 2526
BlsI GCNGC 6 cut(s) 122, 1303, 1633, 1745, 2490, 2527
BmcAI AGTACT 1 cut(s) 1500
Bme1390I CCNGG 7 cut(s) 52, 147, 480, 726, 801, 1155, 1595
Bme18I GGWCC 2 cut(s) 2104, 2422
BmeT110I CYCGRG 1 cut(s) 1996
BmgT120I GGNCC 3 cut(s) 838, 2104, 2422
BmiI GGNNCC 4 cut(s) 364, 839, 1099, 2105
BmrFI CCNGG 7 cut(s) 52, 147, 480, 726, 801, 1155, 1595
BmrI ACTGGG 4 cut(s) 519, 765, 816, 850
BmsI GCATC 6 cut(s) 571, 1018, 1301, 1845, 2369, 2477
BmuI ACTGGG 4 cut(s) 519, 765, 816, 850
BoxI GACNNNNGTC 1 cut(s) 1550
BpiI GAAGAC 3 cut(s) 1050, 1550, 2494
BplI GAGNNNNNCTC 2 cut(s) 2258, 2290
BpmI CTGGAG 1 cut(s) 276
Bpu10I CCTNAGC 2 cut(s) 1747, 2484
BpuEI CTTGAG 4 cut(s) 65, 82, 1595, 2395
BpuMI CCSGG 2 cut(s) 1155, 1595
BsaI GGTCTC 3 cut(s) 276, 305, 551
BsaJI CCNNGG 8 cut(s) 51, 145, 478, 724, 799, 908, 1154, 2418
BsaXI ACNNNNNCTCC 4 cut(s) 273, 303, 1040, 1070
Bsc4I CCNNNNNNNGG 3 cut(s) 273, 806, 2424
Bse118I RCCGGY 1 cut(s) 2424
Bse1I ACTGG 8 cut(s) 315, 364, 514, 561, 760, 811, 856, 1085
BseBI CCWGG 5 cut(s) 52, 147, 480, 726, 801
BseDI CCNNGG 8 cut(s) 51, 145, 478, 724, 799, 908, 1154, 2418
BseGI GGATG 8 cut(s) 91, 501, 747, 1214, 1573, 1860, 2203, 2438
BseLI CCNNNNNNNGG 3 cut(s) 273, 806, 2424
BseMII CTCAG 1 cut(s) 1761
BseNI ACTGG 8 cut(s) 315, 364, 514, 561, 760, 811, 856, 1085
BseRI GAGGAG 3 cut(s) 20, 1860, 2279
BseXI GCAGC 6 cut(s) 132, 1313, 1643, 1755, 2500, 2512
BshFI GGCC 4 cut(s) 840, 913, 1457, 2428
BshNI GGYRCC 2 cut(s) 362, 1097
BsiHKAI GWGCWC 1 cut(s) 2584
BsiHKCI CYCGRG 1 cut(s) 1996
BsiSI CCGG 4 cut(s) 1154, 1458, 1595, 2425
BslFI GGGAC 3 cut(s) 68, 824, 2117
BslI CCNNNNNNNGG 3 cut(s) 273, 806, 2424
BsmAI GTCTC 7 cut(s) 225, 276, 305, 420, 551, 591, 666
BsmBI CGTCTC 3 cut(s) 420, 591, 666
BsmFI GGGAC 3 cut(s) 68, 824, 2117
BsmI GAATGC 2 cut(s) 2382, 2545
BsnI GGCC 4 cut(s) 840, 913, 1457, 2428
Bso31I GGTCTC 3 cut(s) 276, 305, 551
BsoBI CYCGRG 1 cut(s) 1996
Bsp1286I GDGCHC 1 cut(s) 2584
Bsp1407I TGTACA 2 cut(s) 379, 625
Bsp143I GATC 7 cut(s) 65, 219, 921, 1282, 1465, 1612, 2020
BspACI CCGC 1 cut(s) 163
BspANI GGCC 4 cut(s) 840, 913, 1457, 2428
BspCNI CTCAG 1 cut(s) 1760
BspLI GGNNCC 4 cut(s) 364, 839, 1099, 2105
BspMAI CTGCAG 2 cut(s) 334, 580
BspPI GGATC 4 cut(s) 227, 916, 1277, 2028
BspT107I GGYRCC 2 cut(s) 362, 1097
BspTI CTTAAG 1 cut(s) 1529
BspTNI GGTCTC 3 cut(s) 276, 305, 551
BsrFI RCCGGY 1 cut(s) 2424
BsrGI TGTACA 2 cut(s) 379, 625
BsrI ACTGG 8 cut(s) 315, 364, 514, 561, 760, 811, 856, 1085
BssAI RCCGGY 1 cut(s) 2424
BssECI CCNNGG 8 cut(s) 51, 145, 478, 724, 799, 908, 1154, 2418
BssMI GATC 7 cut(s) 65, 219, 921, 1282, 1465, 1612, 2020
BssSI CACGAG 1 cut(s) 1968
BssT1I CCWWGG 2 cut(s) 908, 2418
Bst2BI CACGAG 1 cut(s) 1968
Bst2UI CCWGG 5 cut(s) 52, 147, 480, 726, 801
Bst4CI ACNGT 3 cut(s) 211, 1124, 2397
Bst6I CTCTTC 3 cut(s) 29, 38, 2478
BstAFI CTTAAG 1 cut(s) 1529
BstAUI TGTACA 2 cut(s) 379, 625
BstC8I GCNNGC 3 cut(s) 2405, 2430, 2493
BstDEI CTNAG 8 cut(s) 403, 649, 882, 1352, 1747, 1927, 2326, 2484
BstF5I GGATG 8 cut(s) 91, 501, 747, 1214, 1573, 1860, 2203, 2438
BstKTI GATC 7 cut(s) 68, 222, 924, 1285, 1468, 1615, 2023
BstMAI GTCTC 7 cut(s) 225, 276, 305, 420, 551, 591, 666
BstMBI GATC 7 cut(s) 65, 219, 921, 1282, 1465, 1612, 2020
BstMWI GCNNNNNNNGC 3 cut(s) 1009, 1113, 1298
BstNI CCWGG 5 cut(s) 52, 147, 480, 726, 801
BstNSI RCATGY 3 cut(s) 2155, 2297, 2306
BstPAI GACNNNNGTC 1 cut(s) 1550
BstSCI CCNGG 7 cut(s) 50, 145, 478, 724, 799, 1153, 1593
BstSFI CTRYAG 4 cut(s) 330, 462, 576, 708
BstV1I GCAGC 6 cut(s) 132, 1313, 1643, 1755, 2500, 2512
BstV2I GAAGAC 3 cut(s) 1050, 1550, 2494
BstX2I RGATCY 3 cut(s) 1282, 1465, 2020
BstYI RGATCY 3 cut(s) 1282, 1465, 2020
BsuI GTATCC 2 cut(s) 385, 631
BsuRI GGCC 4 cut(s) 840, 913, 1457, 2428
BtgZI GCGATG 1 cut(s) 2328
BtsCI GGATG 8 cut(s) 91, 501, 747, 1214, 1573, 1860, 2203, 2438
BtsI GCAGTG 2 cut(s) 2175, 2527
BtsIMutI CAGTG 5 cut(s) 216, 357, 1129, 2175, 2527
Cac8I GCNNGC 3 cut(s) 2405, 2430, 2493
Cfr10I RCCGGY 1 cut(s) 2424
Cfr13I GGNCC 3 cut(s) 838, 2104, 2422
CseI GACGC 2 cut(s) 573, 1298
Csp6I GTAC 5 cut(s) 380, 626, 1326, 1499, 2219
CviQI GTAC 5 cut(s) 380, 626, 1326, 1499, 2219
DdeI CTNAG 8 cut(s) 403, 649, 882, 1352, 1747, 1927, 2326, 2484
DpnI GATC 7 cut(s) 67, 221, 923, 1284, 1467, 1614, 2022
DpnII GATC 7 cut(s) 65, 219, 921, 1282, 1465, 1612, 2020
EaeI YGGCCR 1 cut(s) 2426
Eam1104I CTCTTC 3 cut(s) 29, 38, 2478
EarI CTCTTC 3 cut(s) 29, 38, 2478
Ecl136II GAGCTC 1 cut(s) 2582
Eco130I CCWWGG 2 cut(s) 908, 2418
Eco24I GRGCYC 1 cut(s) 2584
Eco31I GGTCTC 3 cut(s) 276, 305, 551
Eco47I GGWCC 2 cut(s) 2104, 2422
Eco53kI GAGCTC 1 cut(s) 2582
Eco57I CTGAAG 2 cut(s) 124, 2488
Eco88I CYCGRG 1 cut(s) 1996
EcoICRI GAGCTC 1 cut(s) 2582
EcoRI GAATTC 1 cut(s) 1766
EcoRII CCWGG 5 cut(s) 50, 145, 478, 724, 799
EcoT14I CCWWGG 2 cut(s) 908, 2418
EcoT22I ATGCAT 1 cut(s) 2384
EcoT38I GRGCYC 1 cut(s) 2584
ErhI CCWWGG 2 cut(s) 908, 2418
Esp3I CGTCTC 3 cut(s) 420, 591, 666
FalI AAGNNNNNCTT 2 cut(s) 1910, 1942
FaqI GGGAC 3 cut(s) 68, 824, 2117
FauNDI CATATG 2 cut(s) 622, 1375
FblI GTMKAC 1 cut(s) 1150
Fnu4HI GCNGC 6 cut(s) 121, 1302, 1632, 1744, 2489, 2526
FokI GGATG 8 cut(s) 98, 508, 754, 1221, 1580, 1867, 2210, 2425
FriOI GRGCYC 1 cut(s) 2584
Fsp4HI GCNGC 6 cut(s) 121, 1302, 1632, 1744, 2489, 2526
FspBI CTAG 9 cut(s) 156, 287, 515, 761, 791, 1625, 1740, 1859, 2045
GluI GCNGC 6 cut(s) 121, 1302, 1632, 1744, 2489, 2526
GsuI CTGGAG 1 cut(s) 276
HaeIII GGCC 4 cut(s) 840, 913, 1457, 2428
HapII CCGG 4 cut(s) 1154, 1458, 1595, 2425
HgaI GACGC 2 cut(s) 573, 1298
HindIII AAGCTT 2 cut(s) 1820, 1885
HpaII CCGG 4 cut(s) 1154, 1458, 1595, 2425
HphI GGTGA 8 cut(s) 256, 908, 1053, 1288, 1709, 1775, 1979, 2148
Hpy166II GTNNAC 4 cut(s) 98, 1151, 1220, 1447
Hpy188I TCNGA 9 cut(s) 202, 504, 750, 926, 1204, 1617, 2074, 2197, 2507
Hpy8I GTNNAC 4 cut(s) 98, 1151, 1220, 1447
HpyAV CCTTC 9 cut(s) 1039, 1247, 1258, 1388, 1664, 1711, 1932, 1933, 2309
HpyCH4III ACNGT 3 cut(s) 211, 1124, 2397
HpyF10VI GCNNNNNNNGC 3 cut(s) 1009, 1113, 1298
HpyF3I CTNAG 8 cut(s) 403, 649, 882, 1352, 1747, 1927, 2326, 2484
Kzo9I GATC 7 cut(s) 65, 219, 921, 1282, 1465, 1612, 2020
LmnI GCTCC 1 cut(s) 2579
Lsp1109I GCAGC 6 cut(s) 132, 1313, 1643, 1755, 2500, 2512
LweI GCATC 6 cut(s) 571, 1018, 1301, 1845, 2369, 2477
MaeI CTAG 9 cut(s) 156, 287, 515, 761, 791, 1625, 1740, 1859, 2045
MaeIII GTNAC 5 cut(s) 786, 1076, 1378, 1701, 2154
MalI GATC 7 cut(s) 67, 221, 923, 1284, 1467, 1614, 2022
MboI GATC 7 cut(s) 65, 219, 921, 1282, 1465, 1612, 2020
MflI RGATCY 3 cut(s) 1282, 1465, 2020
MhlI GDGCHC 1 cut(s) 2584
MlyI GAGTC 3 cut(s) 1233, 1886, 1988
MmeI TCCRAC 3 cut(s) 369, 1163, 2116
Mph1103I ATGCAT 1 cut(s) 2384
MroXI GAANNNNTTC 2 cut(s) 1360, 2512
MslI CAYNNNNRTG 1 cut(s) 1095
MspA1I CMGCKG 1 cut(s) 385
MspCI CTTAAG 1 cut(s) 1529
MspI CCGG 4 cut(s) 1154, 1458, 1595, 2425
MspR9I CCNGG 7 cut(s) 52, 147, 480, 726, 801, 1155, 1595
Mva1269I GAATGC 2 cut(s) 2382, 2545
MvaI CCWGG 5 cut(s) 52, 147, 480, 726, 801
MwoI GCNNNNNNNGC 3 cut(s) 1009, 1113, 1298
NciI CCSGG 2 cut(s) 1155, 1595
NdeI CATATG 2 cut(s) 622, 1375
NdeII GATC 7 cut(s) 65, 219, 921, 1282, 1465, 1612, 2020
NlaIV GGNNCC 4 cut(s) 364, 839, 1099, 2105
NmuCI GTSAC 4 cut(s) 786, 1076, 1378, 2154
NsiI ATGCAT 1 cut(s) 2384
NspI RCATGY 3 cut(s) 2155, 2297, 2306
PaeR7I CTCGAG 1 cut(s) 1996
PciI ACATGT 2 cut(s) 2151, 2293
PctI GAATGC 2 cut(s) 2382, 2545
PdmI GAANNNNTTC 2 cut(s) 1360, 2512
PfeI GAWTC 9 cut(s) 432, 499, 678, 745, 1810, 2181, 2339, 2414, 2531
PkrI GCNGC 6 cut(s) 122, 1303, 1633, 1745, 2490, 2527
PleI GAGTC 3 cut(s) 1232, 1886, 1988
PpsI GAGTC 3 cut(s) 1232, 1886, 1988
PscI ACATGT 2 cut(s) 2151, 2293
PshAI GACNNNNGTC 1 cut(s) 1550
PsiI TTATAA 4 cut(s) 303, 549, 870, 1692
Psp124BI GAGCTC 1 cut(s) 2584
Psp6I CCWGG 5 cut(s) 50, 145, 478, 724, 799
PspGI CCWGG 5 cut(s) 50, 145, 478, 724, 799
PspN4I GGNNCC 4 cut(s) 364, 839, 1099, 2105
PspPI GGNCC 3 cut(s) 838, 2104, 2422
PstI CTGCAG 2 cut(s) 334, 580
PsuI RGATCY 3 cut(s) 1282, 1465, 2020
PvuII CAGCTG 1 cut(s) 385
RsaI GTAC 5 cut(s) 381, 627, 1327, 1500, 2220
RsaNI GTAC 5 cut(s) 380, 626, 1326, 1499, 2219
RseI CAYNNNNRTG 1 cut(s) 1095
SacI GAGCTC 1 cut(s) 2584
SatI GCNGC 6 cut(s) 121, 1302, 1632, 1744, 2489, 2526
Sau3AI GATC 7 cut(s) 65, 219, 921, 1282, 1465, 1612, 2020
Sau96I GGNCC 3 cut(s) 838, 2104, 2422
ScaI AGTACT 1 cut(s) 1500
SchI GAGTC 3 cut(s) 1233, 1886, 1988
ScrFI CCNGG 7 cut(s) 52, 147, 480, 726, 801, 1155, 1595
SduI GDGCHC 1 cut(s) 2584
SfaNI GCATC 6 cut(s) 571, 1018, 1301, 1845, 2369, 2477
SfcI CTRYAG 4 cut(s) 330, 462, 576, 708
Sfr274I CTCGAG 1 cut(s) 1996
SinI GGWCC 2 cut(s) 2104, 2422
SlaI CTCGAG 1 cut(s) 1996
SmiMI CAYNNNNRTG 1 cut(s) 1095
SmlI CTYRAG 6 cut(s) 61, 80, 1529, 1574, 1996, 2374
SmoI CTYRAG 6 cut(s) 61, 80, 1529, 1574, 1996, 2374
SpeI ACTAGT 1 cut(s) 1624
SsiI CCGC 1 cut(s) 163
SspI AATATT 2 cut(s) 2038, 2094
SspMI CTAG 9 cut(s) 156, 287, 515, 761, 791, 1625, 1740, 1859, 2045
SstI GAGCTC 1 cut(s) 2584
StyD4I CCNGG 7 cut(s) 50, 145, 478, 724, 799, 1153, 1593
StyI CCWWGG 2 cut(s) 908, 2418
TaaI ACNGT 3 cut(s) 211, 1124, 2397
TaqI TCGA 7 cut(s) 68, 920, 1137, 1295, 1866, 1997, 2584
TatI WGTACW 4 cut(s) 379, 625, 1498, 2218
TfiI GAWTC 9 cut(s) 432, 499, 678, 745, 1810, 2181, 2339, 2414, 2531
TscAI CASTG 5 cut(s) 216, 364, 1129, 2175, 2527
TseFI GTSAC 4 cut(s) 786, 1076, 1378, 2154
TseI GCWGC 6 cut(s) 120, 1301, 1631, 1743, 2488, 2525
Tsp45I GTSAC 4 cut(s) 786, 1076, 1378, 2154
TspGWI ACGGA 3 cut(s) 444, 690, 2431
TspRI CASTG 5 cut(s) 216, 364, 1129, 2175, 2527
Vha464I CTTAAG 1 cut(s) 1529
VpaK11BI GGWCC 2 cut(s) 2104, 2422
XapI RAATTY 4 cut(s) 151, 1766, 2067, 2512
XbaI TCTAGA 1 cut(s) 2044
XceI RCATGY 3 cut(s) 2155, 2297, 2306
XhoI CTCGAG 1 cut(s) 1996
XmiI GTMKAC 1 cut(s) 1150
XmnI GAANNNNTTC 2 cut(s) 1360, 2512
XspI CTAG 9 cut(s) 156, 287, 515, 761, 791, 1625, 1740, 1859, 2045
ZrmI AGTACT 1 cut(s) 1500
Zsp2I ATGCAT 1 cut(s) 2384
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.