Rroxscaffold_6G00405010

serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000006
OG0000112
Physical Location & Seq
Reverse (-)
27493073 .. 27499947
6875 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_6G00405010.1

Sequence Viewer

Length: 1479 bp
ATGCTGTTGAAATCTCTGCTTCTCTTCCTCCTCTTCCAAGTTTGCACTTCCAGGGACACTTTGAGTTCGAACGAAGAACTGAAGGATGATGATGGTGGACTTCTGGTGTCCAAAGAAAGCAGCTTTGAGTTGGGTTTCTTCAGCCCTGGAAATTCTAGCAACCGCTATGTTGGGATTTGGTATTCTCAATCTAAAGTATCTGAAAAAACAGTGGTGTGGATCGCAAACAGAGACAACCCCATCAATGATACCTCTGGAGTTTTCACCATAAACAGGTATGGAGACCTAGTTCTTTATGCTTATAACATGGAGACCAGTCCTATATGGTCTGCAGATGTGTCTCTTTCAATCAAAAACTCCAGCACCTTATCTGCGTATGTACAGCTTTTGGATACAGGAAACTTAGTTATGTTCCAGAATGATAGAGACGGAATCTTTGAATGGCAAAGTTTTGATTATCCTACAGATACTTTAATCCCTGGTATGAAAGTTGGGATGAATTTGAAAACTGGGCTAGAATGGGTTTTAACATCTTGGAAGTCACAAGATGACCCTGGAACTGGGGATTATACCTTTAGGTTTCATAATTGGGGCCACATTTTCACACCCCACTCTTTTATTTATAAAGGTTTGTCTAAGTATTGGCGAGGTGATACAGAGCCTTGGCCTAATTCGATCCGAAATGCAGAGGAAATTTCTTTTTTCCTTTCTTATAACACCAATAAACTTACAATAATGAAGTTGAAGTTTTCTGGGCTACATCAGCACTTGGTATGGAGTGATGCTGACCATCAATGGAAGGAATTGTGGTCTTCACCGAAATACAGGTGTGACTGGTATGGACATTGTGGTGCCAACAGCAAATGTAACCTTGACAGTGGTAATCTGTTCGAGTGTGAGTGTCTACCGGGGTATGAACCAAAATCTATAAATGGTTGGAATGGGAGAGATGGGTCAGATGGATGTGTGAGTAAACGAGTCAAAGTGACAAAGTGTAGAAATGGAGAAGGGTTTGTGAAGGTGGAAAGGGTGAAAGATCCAGACGCATCGAGAGCAGCATCGTTGAAAAGAGGTATGAGTACCAAAGAGTGTGAGCAGGAGTGCCTAAGAAATTGTTCTTGCACGGCATATATGACCAAAAAGATTGAAGGGGTTATTAATTGCTTGACATGGTATGATGACTTGATGGACATTTTGGTTTACACAGAGGCCGGACGAGATCTGTATGTTCGTGTGGATAAAATTGAGTTAGCTGAGAATGCCGCAAACTCACAAGGATTCTTCAGGAGGGGCATGCTTGTTGTTCCAATACTGTTTGCACTGCTGGCCCTAGTACTAATAAATGTGCTTGCCTGTTGGTTGCTTAAGAAAAAAGGGAAGACAAAAGTCTTTGTGGATGTGGATGAACTTGAGGAAAGCAAGAGACACCCGGAATTGCAATTTTTTGATCTGAACACACTAGTAGCAGCCACGAGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
B_lectin DUF3403 PAN_2 Pkinase Pkinase_Tyr S_locus_glycop

Protein Analysis

492

Amino Acids

56.06

Weight (kDa)

5.99

Isoelectric Point (pI)

34.08

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 70 - 180 2e-34 D-mannose binding lectin
S_locus_glycop PF00954 228 - 309 1.2e-15 S-locus glycoprotein domain
PAN_2 PF08276 332 - 398 1.1e-17 PAN-like domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000112)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g03320 FvH4_3g03322 FvH4_3g03323 FvH4_3g03340 FvH4_3g03350 FvH4_3g03351 FvH4_3g03370 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g06140 FvH4_6g00257 FvH4_6g00257 FvH4_6g00270 FvH4_6g00300 FvH4_6g20800 FvH4_6g20800 FvH4_6g20800 FvH4_6g20800 FvH4_6g20800
malus_domestica MD05G1232700.v1.1 MD05G1327700.v1.1 MD05G1327800.v1.1 MD05G1327900.v1.1 MD05G1328000.v1.1 MD05G1328200.v1.1 MD05G1328300.v1.1 MD05G1328500.v1.1 MD05G1332000.v1.1 MD05G1332100.v1.1 MD10G1307600.v1.1 MD10G1307800.v1.1
prunus_persica Prupe.4G031900_v2.0.a1 Prupe.4G032000_v2.0.a1 Prupe.4G032000_v2.0.a1 Prupe.4G032100_v2.0.a1 Prupe.4G032200_v2.0.a1 Prupe.4G032200_v2.0.a1 Prupe.4G032200_v2.0.a1
pyrus_communis pycom05g30180 pycom05g30190 pycom05g30200 pycom05g30210 pycom10g25920 pycom10g25930
rosa_chinensis RchiOBHm_Chr2g0130831 RchiOBHm_Chr2g0132531 RchiOBHm_Chr2g0132541 RchiOBHm_Chr3g0455681 RchiOBHm_Chr3g0476681 RchiOBHm_Chr3g0476761 RchiOBHm_Chr3g0476771 RchiOBHm_Chr3g0476791 RchiOBHm_Chr3g0476801 RchiOBHm_Chr3g0476811 RchiOBHm_Chr4g0413551 RchiOBHm_Chr4g0413561 RchiOBHm_Chr5g0002911 RchiOBHm_Chr5g0005071 RchiOBHm_Chr5g0005101 RchiOBHm_Chr5g0005111 RchiOBHm_Chr5g0005121 RchiOBHm_Chr5g0005131 RchiOBHm_Chr5g0005141 RchiOBHm_Chr5g0005161 RchiOBHm_Chr5g0005171 RchiOBHm_Chr5g0006341 RchiOBHm_Chr5g0046161 RchiOBHm_Chr5g0046171 RchiOBHm_Chr5g0046181 RchiOBHm_Chr5g0046221 RchiOBHm_Chr5g0046231 RchiOBHm_Chr7g0224061 RchiOBHm_Chr7g0224081 RchiOBHm_Chr7g0224101 RchiOBHm_Chr7g0224111 RchiOBHm_Chr7g0224121
rosa_laevigata RLG00000010193 RLG00000019146 RLG00000019148 RLG00000019149 RLG00000019150 RLG00000023750 RLG00000023751 RLG00000023753 RLG00000029486 RLG00000031068 RLG00000031069 RLG00000031284 RLG00000031285 RLG00000031286 RLG00000031289 RLG00000031290 RLG00000031291 RLG00000031292 RLG00000031293 RLG00000031294 RLG00000031295 RLG00000031296 RLG00000031297 RLG00000031363 RLG00000032618 RLG00000032619
rosa_multiflora Rmu_co8147584.1_g000001 Rmu_co8205828.1_g000001 Rmu_co8373645.1_g000001 Rmu_co8407679.1_g000001 Rmu_co8452561.1_g000001 Rmu_sc0001035.1_g000076 Rmu_sc0001884.1_g000026 Rmu_sc0001884.1_g000027 Rmu_sc0001884.1_g000035 Rmu_sc0002157.1_g000026 Rmu_sc0002399.1_g000006 Rmu_sc0002399.1_g000007 Rmu_sc0002883.1_g000010 Rmu_sc0003629.1_g000014 Rmu_sc0003884.1_g000004 Rmu_sc0007865.1_g000005 Rmu_sc0008085.1_g000013 Rmu_sc0008085.1_g000014 Rmu_sc0008085.1_g000016 Rmu_sc0008085.1_g000018 Rmu_sc0008432.1_g000004 Rmu_sc0008714.1_g000002 Rmu_sc0009296.1_g000008 Rmu_sc0009296.1_g000009 Rmu_sc0009296.1_g000011 Rmu_sc0010281.1_g000001 Rmu_sc0010281.1_g000002 Rmu_sc0010714.1_g000011 Rmu_sc0010714.1_g000016 Rmu_sc0011169.1_g000001 Rmu_sc0011169.1_g000007 Rmu_sc0013603.1_g000006 Rmu_sc0020478.1_g000003 Rmu_sc0020478.1_g000007 Rmu_sc0025106.1_g000012 Rmu_sc0032709.1_g000001 Rmu_sc0033028.1_g000001
rosa_roxburghii Rroxscaffold_1G00069570 Rroxscaffold_1G00069610 Rroxscaffold_1G00069620 Rroxscaffold_1G00070480 Rroxscaffold_1G00070490 Rroxscaffold_1G00070500 Rroxscaffold_1G00070510 Rroxscaffold_1G00070520 Rroxscaffold_1G00070530 Rroxscaffold_1G00070540 Rroxscaffold_1G00070550 Rroxscaffold_1G00070590 Rroxscaffold_1G00072950 Rroxscaffold_1G00073080 Rroxscaffold_2G00111810 Rroxscaffold_2G00111820 Rroxscaffold_2G00113530 Rroxscaffold_2G00113870 Rroxscaffold_6G00405010 Rroxscaffold_6G00405020 Rroxscaffold_6G00423590 Rroxscaffold_6G00424100
rosa_rugosa Rorug02G0293200 Rorug02G0293300 Rorug02G0293400 Rorug02G0305900 Rorug02G0305900 Rorug03G0009100 Rorug03G0157000 Rorug03G0157000 Rorug03G0304900 Rorug04G0400500 Rorug04G0415200 Rorug04G0415300 Rorug04G0415400 Rorug04G0415500 Rorug04G0421100 Rorug05G0068000 Rorug05G0068100 Rorug05G0068200 Rorug05G0068500 Rorug05G0224600 Rorug05G0224700
rosa_samantha Rh2CG331700 Rh2CG341600 Rh2CG341700 Rh2DG381200 Rh3DG071200 Rh3DG233400 Rh3DG233500 Rh3DG233600 Rh5AG043100 Rh5CG026000 Rh5CG047700 Rh5CG047800 Rh5CG047900 Rh5CG048000 Rh5CG048100 Rh5CG048300 Rh5CG056500 Rh5CG340500 Rh5CG340700 Rh5CG340800 Rh7AG365000
rosa_wichuraiana Rw0G002360 Rw0G002370 Rw0G012520 Rw0G018230 Rw0G019190 Rw2G027480 Rw2G029150 Rw3G005520 Rw3G005880 Rw3G005890 Rw3G018840 Rw3G018850 Rw3G018870 Rw3G018880 Rw3G020740 Rw5G002190 Rw5G004180 Rw5G004190 Rw5G004890 Rw5G013960 Rw5G014000 Rw5G028610 Rw7G030910 Rw7G030920

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 3 cut(s) 303, 624, 714
AccB1I GGYRCC 1 cut(s) 851
AccI GTMKAC 1 cut(s) 904
AciI CCGC 2 cut(s) 163, 1263
AclWI GGATC 3 cut(s) 227, 670, 1031
AcsI RAATTY 3 cut(s) 151, 499, 693
AcuI CTGAAG 3 cut(s) 101, 124, 1267
AfaI GTAC 3 cut(s) 381, 1081, 1335
AfiI CCNNNNNNNGG 2 cut(s) 273, 560
AflII CTTAAG 1 cut(s) 1364
AgsI TTSAA 7 cut(s) 10, 348, 440, 505, 745, 1066, 1148
AhlI ACTAGT 1 cut(s) 1459
AjnI CCWGG 4 cut(s) 50, 145, 478, 553
AloI GAACNNNNNNTCC 2 cut(s) 273, 305
AluBI AGCT 3 cut(s) 123, 385, 1253
AluI AGCT 3 cut(s) 123, 385, 1253
Alw26I GTCTC 6 cut(s) 225, 276, 305, 345, 420, 1417
AlwI GGATC 3 cut(s) 227, 670, 1031
AoxI GGCC 4 cut(s) 592, 665, 1209, 1326
ApeKI GCWGC 3 cut(s) 120, 1055, 1466
ApoI RAATTY 3 cut(s) 151, 499, 693
ArsI GACNNNNNNTTYG 2 cut(s) 419, 451
AseI ATTAAT 1 cut(s) 1158
Asp700I GAANNNNTTC 1 cut(s) 1114
AspS9I GGNCC 2 cut(s) 592, 1327
AsuC2I CCSGG 2 cut(s) 909, 1430
AsuHPI GGTGA 4 cut(s) 256, 662, 807, 1042
AsuII TTCGAA 1 cut(s) 68
BanI GGYRCC 1 cut(s) 851
BauI CACGAG 1 cut(s) 1471
BbsI GAAGAC 2 cut(s) 804, 1385
BbvI GCAGC 2 cut(s) 132, 1067
BccI CCATC 6 cut(s) 86, 248, 798, 944, 953, 1180
BceAI ACGGC 1 cut(s) 1140
BciT130I CCWGG 4 cut(s) 52, 147, 480, 555
BciVI GTATCC 1 cut(s) 385
BcnI CCSGG 2 cut(s) 909, 1430
BcoDI GTCTC 6 cut(s) 225, 276, 305, 345, 420, 1417
BcuI ACTAGT 1 cut(s) 1459
BfaI CTAG 5 cut(s) 156, 287, 515, 1331, 1460
BfmI CTRYAG 2 cut(s) 330, 462
BfrI CTTAAG 1 cut(s) 1364
BfuI GTATCC 1 cut(s) 385
BglII AGATCT 1 cut(s) 1219
BisI GCNGC 4 cut(s) 121, 1056, 1263, 1467
BlsI GCNGC 4 cut(s) 122, 1057, 1264, 1468
BmcAI AGTACT 1 cut(s) 1335
Bme1390I CCNGG 6 cut(s) 52, 147, 480, 555, 909, 1430
BmgT120I GGNCC 2 cut(s) 592, 1327
BmiI GGNNCC 2 cut(s) 593, 853
BmrFI CCNGG 6 cut(s) 52, 147, 480, 555, 909, 1430
BmrI ACTGGG 2 cut(s) 519, 570
BmsI GCATC 3 cut(s) 772, 1055, 1067
BmuI ACTGGG 2 cut(s) 519, 570
BoxI GACNNNNGTC 1 cut(s) 1385
BpiI GAAGAC 2 cut(s) 804, 1385
BpmI CTGGAG 2 cut(s) 276, 343
Bpu14I TTCGAA 1 cut(s) 68
BpuEI CTTGAG 1 cut(s) 1430
BpuMI CCSGG 2 cut(s) 909, 1430
BsaI GGTCTC 2 cut(s) 276, 305
BsaJI CCNNGG 6 cut(s) 51, 145, 478, 553, 662, 908
BsaXI ACNNNNNCTCC 2 cut(s) 273, 303
Bsc4I CCNNNNNNNGG 2 cut(s) 273, 560
Bse1I ACTGG 4 cut(s) 315, 514, 565, 839
BseBI CCWGG 4 cut(s) 52, 147, 480, 555
BseDI CCNNGG 6 cut(s) 51, 145, 478, 553, 662, 908
BseGI GGATG 5 cut(s) 91, 501, 968, 1402, 1408
BseLI CCNNNNNNNGG 2 cut(s) 273, 560
BseMII CTCAG 1 cut(s) 1245
BseNI ACTGG 4 cut(s) 315, 514, 565, 839
BseRI GAGGAG 1 cut(s) 20
BseXI GCAGC 2 cut(s) 132, 1067
BshFI GGCC 4 cut(s) 594, 667, 1211, 1328
BshNI GGYRCC 1 cut(s) 851
BsiSI CCGG 3 cut(s) 908, 1212, 1430
BslFI GGGAC 1 cut(s) 68
BslI CCNNNNNNNGG 2 cut(s) 273, 560
BsmAI GTCTC 6 cut(s) 225, 276, 305, 345, 420, 1417
BsmBI CGTCTC 1 cut(s) 420
BsmFI GGGAC 1 cut(s) 68
BsmI GAATGC 1 cut(s) 1264
BsnI GGCC 4 cut(s) 594, 667, 1211, 1328
Bso31I GGTCTC 2 cut(s) 276, 305
Bsp119I TTCGAA 1 cut(s) 68
Bsp1407I TGTACA 1 cut(s) 379
Bsp143I GATC 5 cut(s) 219, 675, 1036, 1219, 1447
BspACI CCGC 2 cut(s) 163, 1263
BspANI GGCC 4 cut(s) 594, 667, 1211, 1328
BspCNI CTCAG 1 cut(s) 1246
BspLI GGNNCC 2 cut(s) 593, 853
BspMAI CTGCAG 1 cut(s) 334
BspPI GGATC 3 cut(s) 227, 670, 1031
BspT104I TTCGAA 1 cut(s) 68
BspT107I GGYRCC 1 cut(s) 851
BspTI CTTAAG 1 cut(s) 1364
BspTNI GGTCTC 2 cut(s) 276, 305
BsrGI TGTACA 1 cut(s) 379
BsrI ACTGG 4 cut(s) 315, 514, 565, 839
BssECI CCNNGG 6 cut(s) 51, 145, 478, 553, 662, 908
BssMI GATC 5 cut(s) 219, 675, 1036, 1219, 1447
BssSI CACGAG 1 cut(s) 1471
BssT1I CCWWGG 1 cut(s) 662
Bst2BI CACGAG 1 cut(s) 1471
Bst2UI CCWGG 4 cut(s) 52, 147, 480, 555
Bst4CI ACNGT 3 cut(s) 211, 878, 1314
Bst6I CTCTTC 2 cut(s) 29, 38
BstAFI CTTAAG 1 cut(s) 1364
BstAUI TGTACA 1 cut(s) 379
BstBI TTCGAA 1 cut(s) 68
BstC8I GCNNGC 3 cut(s) 1295, 1326, 1350
BstDEI CTNAG 4 cut(s) 403, 636, 1106, 1254
BstF5I GGATG 5 cut(s) 91, 501, 968, 1402, 1408
BstKTI GATC 5 cut(s) 222, 678, 1039, 1222, 1450
BstMAI GTCTC 6 cut(s) 225, 276, 305, 345, 420, 1417
BstMBI GATC 5 cut(s) 219, 675, 1036, 1219, 1447
BstMWI GCNNNNNNNGC 4 cut(s) 763, 1052, 1259, 1325
BstNI CCWGG 4 cut(s) 52, 147, 480, 555
BstNSI RCATGY 1 cut(s) 1297
BstPAI GACNNNNGTC 1 cut(s) 1385
BstSCI CCNGG 6 cut(s) 50, 145, 478, 553, 907, 1428
BstSFI CTRYAG 2 cut(s) 330, 462
BstV1I GCAGC 2 cut(s) 132, 1067
BstV2I GAAGAC 2 cut(s) 804, 1385
BstX2I RGATCY 2 cut(s) 1036, 1219
BstYI RGATCY 2 cut(s) 1036, 1219
BsuI GTATCC 1 cut(s) 385
BsuRI GGCC 4 cut(s) 594, 667, 1211, 1328
BtsCI GGATG 5 cut(s) 91, 501, 968, 1402, 1408
BtsI GCAGTG 1 cut(s) 1319
BtsIMutI CAGTG 3 cut(s) 216, 883, 1319
Cac8I GCNNGC 3 cut(s) 1295, 1326, 1350
Cfr13I GGNCC 2 cut(s) 592, 1327
CseI GACGC 1 cut(s) 1052
Csp6I GTAC 3 cut(s) 380, 1080, 1334
CviAII CATG 3 cut(s) 307, 1170, 1294
CviQI GTAC 3 cut(s) 380, 1080, 1334
DdeI CTNAG 4 cut(s) 403, 636, 1106, 1254
DpnI GATC 5 cut(s) 221, 677, 1038, 1221, 1449
DpnII GATC 5 cut(s) 219, 675, 1036, 1219, 1447
Eam1104I CTCTTC 2 cut(s) 29, 38
EarI CTCTTC 2 cut(s) 29, 38
Eco130I CCWWGG 1 cut(s) 662
Eco31I GGTCTC 2 cut(s) 276, 305
Eco57I CTGAAG 3 cut(s) 101, 124, 1267
EcoRII CCWGG 4 cut(s) 50, 145, 478, 553
EcoT14I CCWWGG 1 cut(s) 662
ErhI CCWWGG 1 cut(s) 662
Esp3I CGTCTC 1 cut(s) 420
FaeI CATG 3 cut(s) 310, 1173, 1297
FaqI GGGAC 1 cut(s) 68
FatI CATG 3 cut(s) 306, 1169, 1293
FblI GTMKAC 1 cut(s) 904
Fnu4HI GCNGC 4 cut(s) 121, 1056, 1263, 1467
FokI GGATG 5 cut(s) 98, 508, 975, 1409, 1415
Fsp4HI GCNGC 4 cut(s) 121, 1056, 1263, 1467
FspBI CTAG 5 cut(s) 156, 287, 515, 1331, 1460
GluI GCNGC 4 cut(s) 121, 1056, 1263, 1467
GsuI CTGGAG 2 cut(s) 276, 343
HaeIII GGCC 4 cut(s) 594, 667, 1211, 1328
HapII CCGG 3 cut(s) 908, 1212, 1430
HgaI GACGC 1 cut(s) 1052
Hin1II CATG 3 cut(s) 310, 1173, 1297
HinfI GANTC 3 cut(s) 432, 978, 1278
HpaII CCGG 3 cut(s) 908, 1212, 1430
HphI GGTGA 4 cut(s) 256, 662, 807, 1042
Hpy166II GTNNAC 4 cut(s) 98, 905, 974, 1201
Hpy188I TCNGA 4 cut(s) 202, 680, 958, 1452
Hpy188III TCNNGA 5 cut(s) 255, 415, 1040, 1050, 1285
Hpy8I GTNNAC 4 cut(s) 98, 905, 974, 1201
HpyAV CCTTC 5 cut(s) 76, 793, 1001, 1012, 1142
HpyCH4III ACNGT 3 cut(s) 211, 878, 1314
HpyCH4V TGCA 6 cut(s) 45, 332, 686, 1122, 1319, 1438
HpyF10VI GCNNNNNNNGC 4 cut(s) 763, 1052, 1259, 1325
HpyF3I CTNAG 4 cut(s) 403, 636, 1106, 1254
Hsp92II CATG 3 cut(s) 310, 1173, 1297
Kzo9I GATC 5 cut(s) 219, 675, 1036, 1219, 1447
Lsp1109I GCAGC 2 cut(s) 132, 1067
LweI GCATC 3 cut(s) 772, 1055, 1067
MaeI CTAG 5 cut(s) 156, 287, 515, 1331, 1460
MaeIII GTNAC 4 cut(s) 540, 830, 866, 985
MalI GATC 5 cut(s) 221, 677, 1038, 1221, 1449
MboI GATC 5 cut(s) 219, 675, 1036, 1219, 1447
MboII GAAGA 7 cut(s) 16, 25, 86, 130, 804, 1273, 1390
MflI RGATCY 2 cut(s) 1036, 1219
MlyI GAGTC 1 cut(s) 987
MmeI TCCRAC 1 cut(s) 917
MnlI CCTC 9 cut(s) 38, 41, 262, 641, 682, 1064, 1201, 1281, 1405
MroXI GAANNNNTTC 1 cut(s) 1114
MseI TTAA 4 cut(s) 473, 527, 1158, 1365
MslI CAYNNNNRTG 1 cut(s) 849
MspCI CTTAAG 1 cut(s) 1364
MspI CCGG 3 cut(s) 908, 1212, 1430
MspR9I CCNGG 6 cut(s) 52, 147, 480, 555, 909, 1430
Mva1269I GAATGC 1 cut(s) 1264
MvaI CCWGG 4 cut(s) 52, 147, 480, 555
MwoI GCNNNNNNNGC 4 cut(s) 763, 1052, 1259, 1325
NciI CCSGG 2 cut(s) 909, 1430
NdeII GATC 5 cut(s) 219, 675, 1036, 1219, 1447
NlaIII CATG 3 cut(s) 310, 1173, 1297
NlaIV GGNNCC 2 cut(s) 593, 853
NmuCI GTSAC 3 cut(s) 540, 830, 985
NspI RCATGY 1 cut(s) 1297
NspV TTCGAA 1 cut(s) 68
PaeI GCATGC 1 cut(s) 1297
PctI GAATGC 1 cut(s) 1264
PdmI GAANNNNTTC 1 cut(s) 1114
PfeI GAWTC 2 cut(s) 432, 1278
PkrI GCNGC 4 cut(s) 122, 1057, 1264, 1468
PleI GAGTC 1 cut(s) 986
PpsI GAGTC 1 cut(s) 986
PshAI GACNNNNGTC 1 cut(s) 1385
PshBI ATTAAT 1 cut(s) 1158
PsiI TTATAA 3 cut(s) 303, 624, 714
Psp6I CCWGG 4 cut(s) 50, 145, 478, 553
PspGI CCWGG 4 cut(s) 50, 145, 478, 553
PspN4I GGNNCC 2 cut(s) 593, 853
PspPI GGNCC 2 cut(s) 592, 1327
PstI CTGCAG 1 cut(s) 334
PsuI RGATCY 2 cut(s) 1036, 1219
RsaI GTAC 3 cut(s) 381, 1081, 1335
RsaNI GTAC 3 cut(s) 380, 1080, 1334
RseI CAYNNNNRTG 1 cut(s) 849
SaqAI TTAA 4 cut(s) 473, 527, 1158, 1365
SatI GCNGC 4 cut(s) 121, 1056, 1263, 1467
Sau3AI GATC 5 cut(s) 219, 675, 1036, 1219, 1447
Sau96I GGNCC 2 cut(s) 592, 1327
ScaI AGTACT 1 cut(s) 1335
SchI GAGTC 1 cut(s) 987
ScrFI CCNGG 6 cut(s) 52, 147, 480, 555, 909, 1430
SfaNI GCATC 3 cut(s) 772, 1055, 1067
SfcI CTRYAG 2 cut(s) 330, 462
SfuI TTCGAA 1 cut(s) 68
SmiMI CAYNNNNRTG 1 cut(s) 849
SmlI CTYRAG 2 cut(s) 1364, 1409
SmoI CTYRAG 2 cut(s) 1364, 1409
SpeI ACTAGT 1 cut(s) 1459
SphI GCATGC 1 cut(s) 1297
SsiI CCGC 2 cut(s) 163, 1263
SspMI CTAG 5 cut(s) 156, 287, 515, 1331, 1460
StyD4I CCNGG 6 cut(s) 50, 145, 478, 553, 907, 1428
StyI CCWWGG 1 cut(s) 662
TaaI ACNGT 3 cut(s) 211, 878, 1314
TaqI TCGA 4 cut(s) 68, 674, 891, 1049
TatI WGTACW 2 cut(s) 379, 1333
TauI GCSGC 1 cut(s) 1265
TfiI GAWTC 2 cut(s) 432, 1278
Tru1I TTAA 4 cut(s) 473, 527, 1158, 1365
Tru9I TTAA 4 cut(s) 473, 527, 1158, 1365
TscAI CASTG 3 cut(s) 216, 883, 1326
TseFI GTSAC 3 cut(s) 540, 830, 985
TseI GCWGC 3 cut(s) 120, 1055, 1466
Tsp45I GTSAC 3 cut(s) 540, 830, 985
TspDTI ATGAA 6 cut(s) 500, 512, 572, 752, 930, 1419
TspGWI ACGGA 1 cut(s) 444
TspRI CASTG 3 cut(s) 216, 883, 1326
Vha464I CTTAAG 1 cut(s) 1364
VspI ATTAAT 1 cut(s) 1158
XapI RAATTY 3 cut(s) 151, 499, 693
XceI RCATGY 1 cut(s) 1297
XmiI GTMKAC 1 cut(s) 904
XmnI GAANNNNTTC 1 cut(s) 1114
XspI CTAG 5 cut(s) 156, 287, 515, 1331, 1460
ZrmI AGTACT 1 cut(s) 1335
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.