Rmu_sc0002399.1_g000006

serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002399.1
OG0000112
Physical Location & Seq
Reverse (-)
16882 .. 20112
3231 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002399.1_g000006.1.cds

Sequence Viewer

Length: 2298 bp
atgctgttgaaatctctgcttctcttcctcctcttccaagtttgcacttccagggacaccttgagatcgaacgaagaactcaaggatgatgatggtggacttctggtgtccaaagaaagcagctttgagttgggtttcttcagtcctggaaattctagcaaccgctatgttgggatttggtattctcaatctaaagtatctgaaaaaacagtggtgtggatcgcaaacagagacaaccccatcaatgatacctctggagttttcaccataaacagaatgatagagatggaatctttgtatggcaaagttttgaactttgattatcctacagatactttaatccctggtatgaaagttgggatgaatcggaaaactgggctagaatgggttttaacatcttggaagtcactagatgaccctggaactggggactatacctttaggcttcataataggggccacattttcacaccccagtcttttatttataaaggtttgtctaagtattggcgaggtgatgcagagccttggcctaattcgatccgaaatgcagaggaaatttcttttttcctttcttataacaccaataaacttacaataatgaagttgatgttttctgggctacatcagcacttggtatggagtgatgctgaccaccaatggaaggagttgtggtcttcaccgaaatacaggtgtgactggtatggacattgtggtgccaacagcaaatgtagccttgacagtggtaatctgttcgagtgtgagtgtctaccggggtatgaaccaaaatctataaatggttggaatgggagagatgggtcagatggatgtgtgagtaaacgagtcaaagtgtcaaagtgtagaaatggagaagggtttgtgaaggtggaaagggtgaaagatccagacgcatcgagagcagcattgttgaaaagaggtatgagtaccaaagagtgtgagcaggagtgcctaagaaattgttcttgcacggcatatgtgaccaaaaagattgaaggggttgttaattgcttgagatggtatgatgacttgatggacattttggtttacacagaggccggacgagatctgtatgttcgtgtggataaaatcgagttagctgagaatgccgcaaactcacaaggattcttcaggaggggcatgcttgttattccagtactgtttgctctgctggccctagtactaataaatgtggttgcctgttggttgcttaagaaaaaagggaagacaaaagtctttgtggatgtggatgaacttgaggaaagcaagagacacccggaattgcaatttttcgatctgaacacactagtagcagccacagataatttctctgatgttaataaacttggcgaaggtggttttggtggtgtttataagggtgagttaccaaatggacagaaggttgctgtgaaaaggctgtctagcagctcaggacaagggattggtgaattcaaaaatgaagttgaactgatagcaggacttcaacacaggaatcttgtgaagcttttaggttgttgtataaagggaggagaaaggatgctagtcctcgaatatatgccgaacaaaagcttggactcatttctttttgatgacactagaaggtccttcttagattggagaaggcgttttgagattatcaatggggttgctcgtgggcttttgtatcttcaccaagactcgagattaaggattattcatagggatctaaaaaccagtaatattcttctagatgatgagatgaccccaaaaatttcagatttcggcatggcaagaatattccatggggaccaacttcaggataacacaaagaaagttgttggaacatatggctatatgtcaccagagtatgcagtgtttgggagattctctatgaaatcggatgtgtttagttttgggattatactattggagattgttagtggcaagagaaacaatggttcttatgaggagaattactccatgaacctgataggacatgtttggcatgtgtggaaagaaggaatagccttagatattgtggattcatcgctacaatcatataagcatgatgaagttttgagatgcattcaagttggactgttgtgcgtgcaagaagattcaaaggaccggccagccatgtcatccattgtgttcatgttgagtggtgaggcatctcttccatctcctaagcagcctgcatttgtcttccgaagaaattccagcaatgctgctgattgctcaagtccaaaagaattgcattctattaacgacttgacaataactattgtgggagctcgataa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
B_lectin DUF3403 PAN_2 Pkinase Pkinase_Tyr S_locus_glycop

Protein Analysis

765

Amino Acids

86.59

Weight (kDa)

7.47

Isoelectric Point (pI)

43.62

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000112)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g03320 FvH4_3g03322 FvH4_3g03323 FvH4_3g03340 FvH4_3g03350 FvH4_3g03351 FvH4_3g03370 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g06140 FvH4_6g00257 FvH4_6g00257 FvH4_6g00270 FvH4_6g00300 FvH4_6g20800 FvH4_6g20800 FvH4_6g20800 FvH4_6g20800 FvH4_6g20800
malus_domestica MD05G1232700.v1.1 MD05G1327700.v1.1 MD05G1327800.v1.1 MD05G1327900.v1.1 MD05G1328000.v1.1 MD05G1328200.v1.1 MD05G1328300.v1.1 MD05G1328500.v1.1 MD05G1332000.v1.1 MD05G1332100.v1.1 MD10G1307600.v1.1 MD10G1307800.v1.1
prunus_persica Prupe.4G031900_v2.0.a1 Prupe.4G032000_v2.0.a1 Prupe.4G032000_v2.0.a1 Prupe.4G032100_v2.0.a1 Prupe.4G032200_v2.0.a1 Prupe.4G032200_v2.0.a1 Prupe.4G032200_v2.0.a1
pyrus_communis pycom05g30180 pycom05g30190 pycom05g30200 pycom05g30210 pycom10g25920 pycom10g25930
rosa_chinensis RchiOBHm_Chr2g0130831 RchiOBHm_Chr2g0132531 RchiOBHm_Chr2g0132541 RchiOBHm_Chr3g0455681 RchiOBHm_Chr3g0476681 RchiOBHm_Chr3g0476761 RchiOBHm_Chr3g0476771 RchiOBHm_Chr3g0476791 RchiOBHm_Chr3g0476801 RchiOBHm_Chr3g0476811 RchiOBHm_Chr4g0413551 RchiOBHm_Chr4g0413561 RchiOBHm_Chr5g0002911 RchiOBHm_Chr5g0005071 RchiOBHm_Chr5g0005101 RchiOBHm_Chr5g0005111 RchiOBHm_Chr5g0005121 RchiOBHm_Chr5g0005131 RchiOBHm_Chr5g0005141 RchiOBHm_Chr5g0005161 RchiOBHm_Chr5g0005171 RchiOBHm_Chr5g0006341 RchiOBHm_Chr5g0046161 RchiOBHm_Chr5g0046171 RchiOBHm_Chr5g0046181 RchiOBHm_Chr5g0046221 RchiOBHm_Chr5g0046231 RchiOBHm_Chr7g0224061 RchiOBHm_Chr7g0224081 RchiOBHm_Chr7g0224101 RchiOBHm_Chr7g0224111 RchiOBHm_Chr7g0224121
rosa_laevigata RLG00000010193 RLG00000019146 RLG00000019148 RLG00000019149 RLG00000019150 RLG00000023750 RLG00000023751 RLG00000023753 RLG00000029486 RLG00000031068 RLG00000031069 RLG00000031284 RLG00000031285 RLG00000031286 RLG00000031289 RLG00000031290 RLG00000031291 RLG00000031292 RLG00000031293 RLG00000031294 RLG00000031295 RLG00000031296 RLG00000031297 RLG00000031363 RLG00000032618 RLG00000032619
rosa_multiflora Rmu_co8147584.1_g000001 Rmu_co8205828.1_g000001 Rmu_co8373645.1_g000001 Rmu_co8407679.1_g000001 Rmu_co8452561.1_g000001 Rmu_sc0001035.1_g000076 Rmu_sc0001884.1_g000026 Rmu_sc0001884.1_g000027 Rmu_sc0001884.1_g000035 Rmu_sc0002157.1_g000026 Rmu_sc0002399.1_g000006 Rmu_sc0002399.1_g000007 Rmu_sc0002883.1_g000010 Rmu_sc0003629.1_g000014 Rmu_sc0003884.1_g000004 Rmu_sc0007865.1_g000005 Rmu_sc0008085.1_g000013 Rmu_sc0008085.1_g000014 Rmu_sc0008085.1_g000016 Rmu_sc0008085.1_g000018 Rmu_sc0008432.1_g000004 Rmu_sc0008714.1_g000002 Rmu_sc0009296.1_g000008 Rmu_sc0009296.1_g000009 Rmu_sc0009296.1_g000011 Rmu_sc0010281.1_g000001 Rmu_sc0010281.1_g000002 Rmu_sc0010714.1_g000011 Rmu_sc0010714.1_g000016 Rmu_sc0011169.1_g000001 Rmu_sc0011169.1_g000007 Rmu_sc0013603.1_g000006 Rmu_sc0020478.1_g000003 Rmu_sc0020478.1_g000007 Rmu_sc0025106.1_g000012 Rmu_sc0032709.1_g000001 Rmu_sc0033028.1_g000001
rosa_roxburghii Rroxscaffold_1G00069570 Rroxscaffold_1G00069610 Rroxscaffold_1G00069620 Rroxscaffold_1G00070480 Rroxscaffold_1G00070490 Rroxscaffold_1G00070500 Rroxscaffold_1G00070510 Rroxscaffold_1G00070520 Rroxscaffold_1G00070530 Rroxscaffold_1G00070540 Rroxscaffold_1G00070550 Rroxscaffold_1G00070590 Rroxscaffold_1G00072950 Rroxscaffold_1G00073080 Rroxscaffold_2G00111810 Rroxscaffold_2G00111820 Rroxscaffold_2G00113530 Rroxscaffold_2G00113870 Rroxscaffold_6G00405010 Rroxscaffold_6G00405020 Rroxscaffold_6G00423590 Rroxscaffold_6G00424100
rosa_rugosa Rorug02G0293200 Rorug02G0293300 Rorug02G0293400 Rorug02G0305900 Rorug02G0305900 Rorug03G0009100 Rorug03G0157000 Rorug03G0157000 Rorug03G0304900 Rorug04G0400500 Rorug04G0415200 Rorug04G0415300 Rorug04G0415400 Rorug04G0415500 Rorug04G0421100 Rorug05G0068000 Rorug05G0068100 Rorug05G0068200 Rorug05G0068500 Rorug05G0224600 Rorug05G0224700
rosa_samantha Rh2CG331700 Rh2CG341600 Rh2CG341700 Rh2DG381200 Rh3DG071200 Rh3DG233400 Rh3DG233500 Rh3DG233600 Rh5AG043100 Rh5CG026000 Rh5CG047700 Rh5CG047800 Rh5CG047900 Rh5CG048000 Rh5CG048100 Rh5CG048300 Rh5CG056500 Rh5CG340500 Rh5CG340700 Rh5CG340800 Rh7AG365000
rosa_wichuraiana Rw0G002360 Rw0G002370 Rw0G012520 Rw0G018230 Rw0G019190 Rw2G027480 Rw2G029150 Rw3G005520 Rw3G005880 Rw3G005890 Rw3G018840 Rw3G018850 Rw3G018870 Rw3G018880 Rw3G020740 Rw5G002190 Rw5G004180 Rw5G004190 Rw5G004890 Rw5G013960 Rw5G014000 Rw5G028610 Rw7G030910 Rw7G030920

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 3 cut(s) 489, 579, 1392
AccB1I GGYRCC 1 cut(s) 716
AccI GTMKAC 1 cut(s) 769
AciI CCGC 2 cut(s) 163, 1128
AclWI GGATC 4 cut(s) 227, 535, 896, 1728
AcoI YGGCCR 1 cut(s) 2126
AcsI RAATTY 5 cut(s) 151, 558, 1466, 1767, 2212
AcuI CTGAAG 3 cut(s) 124, 1132, 1796
AfaI GTAC 3 cut(s) 946, 1176, 1200
AfiI CCNNNNNNNGG 3 cut(s) 425, 664, 1813
AflII CTTAAG 1 cut(s) 1229
AflIII ACRYGT 1 cut(s) 1993
AgsI TTSAA 9 cut(s) 10, 313, 931, 1013, 1471, 1484, 1502, 2087, 2118
AhlI ACTAGT 1 cut(s) 1324
AjnI CCWGG 4 cut(s) 50, 145, 343, 418
AjuI GAANNNNNNNTTGG 4 cut(s) 1362, 1394, 1571, 1603
AluBI AGCT 6 cut(s) 123, 1118, 1446, 1522, 1587, 2291
AluI AGCT 6 cut(s) 123, 1118, 1446, 1522, 1587, 2291
Alw21I GWGCWC 1 cut(s) 2293
Alw26I GTCTC 2 cut(s) 225, 1282
AlwI GGATC 4 cut(s) 227, 535, 896, 1728
Ama87I CYCGRG 1 cut(s) 1696
AoxI GGCC 5 cut(s) 457, 530, 1074, 1191, 2126
ApeKI GCWGC 6 cut(s) 120, 920, 1331, 1443, 2188, 2225
ApoI RAATTY 5 cut(s) 151, 558, 1466, 1767, 2212
Asp700I GAANNNNTTC 2 cut(s) 979, 2212
AspS9I GGNCC 5 cut(s) 457, 1192, 1620, 1804, 2122
AsuC2I CCSGG 2 cut(s) 774, 1295
AsuHPI GGTGA 9 cut(s) 256, 527, 672, 907, 1409, 1475, 1679, 1848, 2174
AvaI CYCGRG 1 cut(s) 1696
AvaII GGWCC 3 cut(s) 1620, 1804, 2122
BanI GGYRCC 1 cut(s) 716
BanII GRGCYC 1 cut(s) 2293
BauI CACGAG 1 cut(s) 1668
BbsI GAAGAC 3 cut(s) 669, 1250, 2194
Bbv12I GWGCWC 1 cut(s) 2293
BbvI GCAGC 6 cut(s) 132, 932, 1343, 1455, 2200, 2212
BccI CCATC 8 cut(s) 86, 248, 280, 809, 818, 1029, 1045, 2185
BceAI ACGGC 1 cut(s) 1005
BciT130I CCWGG 4 cut(s) 52, 147, 345, 420
BcnI CCSGG 2 cut(s) 774, 1295
BcoDI GTCTC 2 cut(s) 225, 1282
BcuI ACTAGT 1 cut(s) 1324
BfaI CTAG 9 cut(s) 156, 380, 410, 1196, 1325, 1440, 1559, 1614, 1745
BfmI CTRYAG 1 cut(s) 327
BfrI CTTAAG 1 cut(s) 1229
BglII AGATCT 1 cut(s) 1084
BisI GCNGC 7 cut(s) 121, 921, 1128, 1332, 1444, 2189, 2226
BlsI GCNGC 7 cut(s) 122, 922, 1129, 1333, 1445, 2190, 2227
BmcAI AGTACT 2 cut(s) 1176, 1200
Bme1390I CCNGG 6 cut(s) 52, 147, 345, 420, 774, 1295
Bme18I GGWCC 3 cut(s) 1620, 1804, 2122
BmeT110I CYCGRG 1 cut(s) 1696
BmgT120I GGNCC 5 cut(s) 457, 1192, 1620, 1804, 2122
BmiI GGNNCC 3 cut(s) 458, 718, 1805
BmrFI CCNGG 6 cut(s) 52, 147, 345, 420, 774, 1295
BmrI ACTGGG 3 cut(s) 384, 435, 469
BmsI GCATC 6 cut(s) 508, 637, 920, 1545, 2069, 2177
BmuI ACTGGG 3 cut(s) 384, 435, 469
BoxI GACNNNNGTC 1 cut(s) 1250
BpiI GAAGAC 3 cut(s) 669, 1250, 2194
BplI GAGNNNNNCTC 2 cut(s) 1958, 1990
BpmI CTGGAG 1 cut(s) 276
Bpu10I CCTNAGC 2 cut(s) 1447, 2184
BpuEI CTTGAG 5 cut(s) 65, 82, 1051, 1295, 2221
BpuMI CCSGG 2 cut(s) 774, 1295
BsaJI CCNNGG 6 cut(s) 51, 343, 418, 527, 773, 1798
BsaXI ACNNNNNCTCC 4 cut(s) 659, 689, 1627, 1657
Bsc4I CCNNNNNNNGG 3 cut(s) 425, 664, 1813
Bse118I RCCGGY 1 cut(s) 2124
Bse1I ACTGG 6 cut(s) 379, 430, 475, 704, 1172, 1731
Bse3DI GCAATG 1 cut(s) 2227
BseBI CCWGG 4 cut(s) 52, 147, 345, 420
BseDI CCNNGG 6 cut(s) 51, 343, 418, 527, 773, 1798
BseGI GGATG 8 cut(s) 91, 366, 833, 1267, 1273, 1560, 1903, 2138
BseLI CCNNNNNNNGG 3 cut(s) 425, 664, 1813
BseMI GCAATG 1 cut(s) 2227
BseMII CTCAG 2 cut(s) 1110, 1461
BseNI ACTGG 6 cut(s) 379, 430, 475, 704, 1172, 1731
BseRI GAGGAG 3 cut(s) 20, 1560, 1979
BseXI GCAGC 6 cut(s) 132, 932, 1343, 1455, 2200, 2212
BshFI GGCC 5 cut(s) 459, 532, 1076, 1193, 2128
BshNI GGYRCC 1 cut(s) 716
BsiHKAI GWGCWC 1 cut(s) 2293
BsiHKCI CYCGRG 1 cut(s) 1696
BsiSI CCGG 4 cut(s) 773, 1077, 1295, 2125
BslFI GGGAC 3 cut(s) 68, 443, 1817
BslI CCNNNNNNNGG 3 cut(s) 425, 664, 1813
BsmAI GTCTC 2 cut(s) 225, 1282
BsmFI GGGAC 3 cut(s) 68, 443, 1817
BsmI GAATGC 3 cut(s) 1129, 2082, 2254
BsnI GGCC 5 cut(s) 459, 532, 1076, 1193, 2128
BsoBI CYCGRG 1 cut(s) 1696
Bsp1286I GDGCHC 1 cut(s) 2293
Bsp143I GATC 7 cut(s) 65, 219, 540, 901, 1084, 1312, 1720
Bsp19I CCATGG 1 cut(s) 1798
BspACI CCGC 2 cut(s) 163, 1128
BspANI GGCC 5 cut(s) 459, 532, 1076, 1193, 2128
BspCNI CTCAG 2 cut(s) 1111, 1460
BspLI GGNNCC 3 cut(s) 458, 718, 1805
BspPI GGATC 4 cut(s) 227, 535, 896, 1728
BspT107I GGYRCC 1 cut(s) 716
BspTI CTTAAG 1 cut(s) 1229
BsrDI GCAATG 1 cut(s) 2227
BsrFI RCCGGY 1 cut(s) 2124
BsrI ACTGG 6 cut(s) 379, 430, 475, 704, 1172, 1731
BssAI RCCGGY 1 cut(s) 2124
BssECI CCNNGG 6 cut(s) 51, 343, 418, 527, 773, 1798
BssMI GATC 7 cut(s) 65, 219, 540, 901, 1084, 1312, 1720
BssSI CACGAG 1 cut(s) 1668
BssT1I CCWWGG 2 cut(s) 527, 1798
Bst2BI CACGAG 1 cut(s) 1668
Bst2UI CCWGG 4 cut(s) 52, 147, 345, 420
Bst4CI ACNGT 4 cut(s) 211, 743, 1179, 2097
Bst6I CTCTTC 3 cut(s) 29, 38, 2178
BstAFI CTTAAG 1 cut(s) 1229
BstC8I GCNNGC 5 cut(s) 1160, 1191, 2105, 2130, 2193
BstDEI CTNAG 7 cut(s) 501, 971, 1119, 1447, 1627, 2026, 2184
BstDSI CCRYGG 1 cut(s) 1798
BstF5I GGATG 8 cut(s) 91, 366, 833, 1267, 1273, 1560, 1903, 2138
BstKTI GATC 7 cut(s) 68, 222, 543, 904, 1087, 1315, 1723
BstMAI GTCTC 2 cut(s) 225, 1282
BstMBI GATC 7 cut(s) 65, 219, 540, 901, 1084, 1312, 1720
BstMWI GCNNNNNNNGC 5 cut(s) 628, 732, 917, 1124, 1190
BstNI CCWGG 4 cut(s) 52, 147, 345, 420
BstNSI RCATGY 3 cut(s) 1162, 1997, 2006
BstPAI GACNNNNGTC 1 cut(s) 1250
BstSCI CCNGG 6 cut(s) 50, 145, 343, 418, 772, 1293
BstSFI CTRYAG 1 cut(s) 327
BstV1I GCAGC 6 cut(s) 132, 932, 1343, 1455, 2200, 2212
BstV2I GAAGAC 3 cut(s) 669, 1250, 2194
BstX2I RGATCY 3 cut(s) 901, 1084, 1720
BstYI RGATCY 3 cut(s) 901, 1084, 1720
BsuRI GGCC 5 cut(s) 459, 532, 1076, 1193, 2128
BtgI CCRYGG 1 cut(s) 1798
BtgZI GCGATG 1 cut(s) 2028
BtsCI GGATG 8 cut(s) 91, 366, 833, 1267, 1273, 1560, 1903, 2138
BtsI GCAGTG 1 cut(s) 1875
BtsIMutI CAGTG 3 cut(s) 216, 748, 1875
Cac8I GCNNGC 5 cut(s) 1160, 1191, 2105, 2130, 2193
Cfr10I RCCGGY 1 cut(s) 2124
Cfr13I GGNCC 5 cut(s) 457, 1192, 1620, 1804, 2122
CseI GACGC 1 cut(s) 917
Csp6I GTAC 3 cut(s) 945, 1175, 1199
CviAII CATG 9 cut(s) 1159, 1783, 1799, 1978, 1994, 2003, 2063, 2134, 2152
CviQI GTAC 3 cut(s) 945, 1175, 1199
DdeI CTNAG 7 cut(s) 501, 971, 1119, 1447, 1627, 2026, 2184
DpnI GATC 7 cut(s) 67, 221, 542, 903, 1086, 1314, 1722
DpnII GATC 7 cut(s) 65, 219, 540, 901, 1084, 1312, 1720
EaeI YGGCCR 1 cut(s) 2126
Eam1104I CTCTTC 3 cut(s) 29, 38, 2178
EarI CTCTTC 3 cut(s) 29, 38, 2178
Ecl136II GAGCTC 1 cut(s) 2291
Eco130I CCWWGG 2 cut(s) 527, 1798
Eco24I GRGCYC 1 cut(s) 2293
Eco47I GGWCC 3 cut(s) 1620, 1804, 2122
Eco53kI GAGCTC 1 cut(s) 2291
Eco57I CTGAAG 3 cut(s) 124, 1132, 1796
Eco88I CYCGRG 1 cut(s) 1696
EcoICRI GAGCTC 1 cut(s) 2291
EcoO109I RGGNCCY 1 cut(s) 1620
EcoRI GAATTC 1 cut(s) 1466
EcoRII CCWGG 4 cut(s) 50, 145, 343, 418
EcoT14I CCWWGG 2 cut(s) 527, 1798
EcoT22I ATGCAT 1 cut(s) 2084
EcoT38I GRGCYC 1 cut(s) 2293
ErhI CCWWGG 2 cut(s) 527, 1798
FaeI CATG 9 cut(s) 1162, 1786, 1802, 1981, 1997, 2006, 2066, 2137, 2155
FaqI GGGAC 3 cut(s) 68, 443, 1817
FatI CATG 9 cut(s) 1158, 1782, 1798, 1977, 1993, 2002, 2062, 2133, 2151
FauNDI CATATG 2 cut(s) 994, 1843
FblI GTMKAC 1 cut(s) 769
Fnu4HI GCNGC 7 cut(s) 121, 921, 1128, 1332, 1444, 2189, 2226
FokI GGATG 8 cut(s) 98, 373, 840, 1274, 1280, 1567, 1910, 2125
FriOI GRGCYC 1 cut(s) 2293
Fsp4HI GCNGC 7 cut(s) 121, 921, 1128, 1332, 1444, 2189, 2226
FspBI CTAG 9 cut(s) 156, 380, 410, 1196, 1325, 1440, 1559, 1614, 1745
GluI GCNGC 7 cut(s) 121, 921, 1128, 1332, 1444, 2189, 2226
GsuI CTGGAG 1 cut(s) 276
HaeIII GGCC 5 cut(s) 459, 532, 1076, 1193, 2128
HapII CCGG 4 cut(s) 773, 1077, 1295, 2125
HgaI GACGC 1 cut(s) 917
Hin1II CATG 9 cut(s) 1162, 1786, 1802, 1981, 1997, 2006, 2066, 2137, 2155
HindIII AAGCTT 2 cut(s) 1520, 1585
HpaII CCGG 4 cut(s) 773, 1077, 1295, 2125
HphI GGTGA 9 cut(s) 256, 527, 672, 907, 1409, 1475, 1679, 1848, 2174
Hpy166II GTNNAC 4 cut(s) 98, 770, 839, 1066
Hpy188I TCNGA 9 cut(s) 202, 369, 545, 823, 1317, 1351, 1774, 1897, 2207
Hpy188III TCNNGA 8 cut(s) 255, 905, 915, 1150, 1449, 1698, 1745, 1814
Hpy8I GTNNAC 4 cut(s) 98, 770, 839, 1066
HpyCH4III ACNGT 4 cut(s) 211, 743, 1179, 2097
HpyF10VI GCNNNNNNNGC 5 cut(s) 628, 732, 917, 1124, 1190
HpyF3I CTNAG 7 cut(s) 501, 971, 1119, 1447, 1627, 2026, 2184
Hsp92II CATG 9 cut(s) 1162, 1786, 1802, 1981, 1997, 2006, 2066, 2137, 2155
Kzo9I GATC 7 cut(s) 65, 219, 540, 901, 1084, 1312, 1720
LmnI GCTCC 1 cut(s) 2288
Lsp1109I GCAGC 6 cut(s) 132, 932, 1343, 1455, 2200, 2212
LweI GCATC 6 cut(s) 508, 637, 920, 1545, 2069, 2177
MaeI CTAG 9 cut(s) 156, 380, 410, 1196, 1325, 1440, 1559, 1614, 1745
MaeIII GTNAC 5 cut(s) 405, 695, 997, 1401, 1854
MalI GATC 7 cut(s) 67, 221, 542, 903, 1086, 1314, 1722
MboI GATC 7 cut(s) 65, 219, 540, 901, 1084, 1312, 1720
MflI RGATCY 3 cut(s) 901, 1084, 1720
MhlI GDGCHC 1 cut(s) 2293
MlyI GAGTC 3 cut(s) 852, 1586, 1688
MmeI TCCRAC 3 cut(s) 782, 1816, 2071
Mph1103I ATGCAT 1 cut(s) 2084
MroXI GAANNNNTTC 2 cut(s) 979, 2212
MseI TTAA 7 cut(s) 338, 392, 1023, 1230, 1356, 1703, 2262
MslI CAYNNNNRTG 1 cut(s) 714
MspCI CTTAAG 1 cut(s) 1229
MspI CCGG 4 cut(s) 773, 1077, 1295, 2125
MspR9I CCNGG 6 cut(s) 52, 147, 345, 420, 774, 1295
Mva1269I GAATGC 3 cut(s) 1129, 2082, 2254
MvaI CCWGG 4 cut(s) 52, 147, 345, 420
MwoI GCNNNNNNNGC 5 cut(s) 628, 732, 917, 1124, 1190
NciI CCSGG 2 cut(s) 774, 1295
NcoI CCATGG 1 cut(s) 1798
NdeI CATATG 2 cut(s) 994, 1843
NdeII GATC 7 cut(s) 65, 219, 540, 901, 1084, 1312, 1720
NlaIII CATG 9 cut(s) 1162, 1786, 1802, 1981, 1997, 2006, 2066, 2137, 2155
NlaIV GGNNCC 3 cut(s) 458, 718, 1805
NmuCI GTSAC 4 cut(s) 405, 695, 997, 1854
NsiI ATGCAT 1 cut(s) 2084
NspI RCATGY 3 cut(s) 1162, 1997, 2006
PaeI GCATGC 1 cut(s) 1162
PaeR7I CTCGAG 1 cut(s) 1696
PciI ACATGT 1 cut(s) 1993
PctI GAATGC 3 cut(s) 1129, 2082, 2254
PdmI GAANNNNTTC 2 cut(s) 979, 2212
PfeI GAWTC 7 cut(s) 290, 364, 1143, 1510, 1881, 2039, 2114
PfoI TCCNGGA 1 cut(s) 145
PkrI GCNGC 7 cut(s) 122, 922, 1129, 1333, 1445, 2190, 2227
PleI GAGTC 3 cut(s) 851, 1586, 1688
PpsI GAGTC 3 cut(s) 851, 1586, 1688
PpuMI RGGWCCY 1 cut(s) 1620
PscI ACATGT 1 cut(s) 1993
PshAI GACNNNNGTC 1 cut(s) 1250
PsiI TTATAA 3 cut(s) 489, 579, 1392
Psp124BI GAGCTC 1 cut(s) 2293
Psp5II RGGWCCY 1 cut(s) 1620
Psp6I CCWGG 4 cut(s) 50, 145, 343, 418
PspGI CCWGG 4 cut(s) 50, 145, 343, 418
PspN4I GGNNCC 3 cut(s) 458, 718, 1805
PspPI GGNCC 5 cut(s) 457, 1192, 1620, 1804, 2122
PspPPI RGGWCCY 1 cut(s) 1620
PsuI RGATCY 3 cut(s) 901, 1084, 1720
RsaI GTAC 3 cut(s) 946, 1176, 1200
RsaNI GTAC 3 cut(s) 945, 1175, 1199
RseI CAYNNNNRTG 1 cut(s) 714
SacI GAGCTC 1 cut(s) 2293
SaqAI TTAA 7 cut(s) 338, 392, 1023, 1230, 1356, 1703, 2262
SatI GCNGC 7 cut(s) 121, 921, 1128, 1332, 1444, 2189, 2226
Sau3AI GATC 7 cut(s) 65, 219, 540, 901, 1084, 1312, 1720
Sau96I GGNCC 5 cut(s) 457, 1192, 1620, 1804, 2122
ScaI AGTACT 2 cut(s) 1176, 1200
SchI GAGTC 3 cut(s) 852, 1586, 1688
ScrFI CCNGG 6 cut(s) 52, 147, 345, 420, 774, 1295
SduI GDGCHC 1 cut(s) 2293
SfaNI GCATC 6 cut(s) 508, 637, 920, 1545, 2069, 2177
SfcI CTRYAG 1 cut(s) 327
Sfr274I CTCGAG 1 cut(s) 1696
SinI GGWCC 3 cut(s) 1620, 1804, 2122
SlaI CTCGAG 1 cut(s) 1696
SmiMI CAYNNNNRTG 1 cut(s) 714
SmlI CTYRAG 7 cut(s) 61, 80, 1030, 1229, 1274, 1696, 2236
SmoI CTYRAG 7 cut(s) 61, 80, 1030, 1229, 1274, 1696, 2236
SpeI ACTAGT 1 cut(s) 1324
SphI GCATGC 1 cut(s) 1162
SsiI CCGC 2 cut(s) 163, 1128
SspI AATATT 2 cut(s) 1738, 1794
SspMI CTAG 9 cut(s) 156, 380, 410, 1196, 1325, 1440, 1559, 1614, 1745
SstI GAGCTC 1 cut(s) 2293
StyD4I CCNGG 6 cut(s) 50, 145, 343, 418, 772, 1293
StyI CCWWGG 2 cut(s) 527, 1798
TaaI ACNGT 4 cut(s) 211, 743, 1179, 2097
TaqI TCGA 9 cut(s) 68, 539, 756, 914, 1110, 1311, 1566, 1697, 2293
TatI WGTACW 2 cut(s) 1174, 1198
TauI GCSGC 1 cut(s) 1130
TfiI GAWTC 7 cut(s) 290, 364, 1143, 1510, 1881, 2039, 2114
Tru1I TTAA 7 cut(s) 338, 392, 1023, 1230, 1356, 1703, 2262
Tru9I TTAA 7 cut(s) 338, 392, 1023, 1230, 1356, 1703, 2262
TscAI CASTG 3 cut(s) 216, 748, 1875
TseFI GTSAC 4 cut(s) 405, 695, 997, 1854
TseI GCWGC 6 cut(s) 120, 920, 1331, 1443, 2188, 2225
Tsp45I GTSAC 4 cut(s) 405, 695, 997, 1854
TspRI CASTG 3 cut(s) 216, 748, 1875
Vha464I CTTAAG 1 cut(s) 1229
VpaK11BI GGWCC 3 cut(s) 1620, 1804, 2122
XapI RAATTY 5 cut(s) 151, 558, 1466, 1767, 2212
XbaI TCTAGA 1 cut(s) 1744
XceI RCATGY 3 cut(s) 1162, 1997, 2006
XhoI CTCGAG 1 cut(s) 1696
XmiI GTMKAC 1 cut(s) 769
XmnI GAANNNNTTC 2 cut(s) 979, 2212
XspI CTAG 9 cut(s) 156, 380, 410, 1196, 1325, 1440, 1559, 1614, 1745
ZrmI AGTACT 2 cut(s) 1176, 1200
Zsp2I ATGCAT 1 cut(s) 2084
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.