Rh5CG047900

serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5C
OG0000112
Physical Location & Seq
Forward (+)
3370179 .. 3371378
1200 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5CG047900.1

Sequence Viewer

Length: 1200 bp
ATGCCGCTGTTGCATACCAACAAAGTTGCAAATGCCCAAAAAAATGTTCTTCAAAACTCTGCTTCTCTTCTTCCTCTTCCAATTTTGCGATTTCAGGGACACCATAACAACCAAGAACAACTGAAGGATGATGGTAGAGTTTTAGTGTCCAAAAAGAGCAAGTTCGAATTGGGTTTCTTCAGCCCTGGAAATTCTAGCAACCGGTATGTTGGAATTTGGTATTCTCAGACTAGAGTATCTAATAAAACAGTGGTGTGGGTTGCAAACAGGAACAATCCCATCAATGATACCTTTGGTGTGCTCAAAATAAACAGGTATGGAGAACTAGTCCTTTATGCTTATAACAAGGAGAGCACTCCTATTTGGTCTACTAATGTGTCGTGTTTGGTTCAAAATGTTAACACAAGCACTTTATCTGCACAGCTTTTAGATACAGGAAATCTAGTTGTGTTCCAGGATGCTAATAATGAAAACTTTTTATGGCAAAGTTTTGATCATCCCACAGATACTTTAATTCCAGGTATGAAAGTTGGGGTGAATTGGAAAACTGGGCAAGAATGGGTTTTAACATCTTGGAAGTCACAAGATGACCCTGCAATTGGGGACTCTACCTTAAGGCTCTATCCAAATCAGATTGCATCCCCCGAAATTTTTATGTACAAGGGTTTGAGTAAGTATTGGCGAAGTCCAGGGCCATCGCCTAATGTGGTCACTAATCAAGAGGAAACTTATTATCTCATGGATGACACCAATGCAATTACAAGAGCAACAGTGACTGATTCTGCGCACGAGCGCTTTACATGGGATGATGGTGGCCTTCAATGGAAGGAAGAATACTCTGAACCGAAGTCTCTGTGTGACTGGTATGGACAGTGTGGTGCCAACAGCAAATGTAGCCCTGACAACATTAATGCTATGCTGTTTTGGTGTGATTGTTTACCAGGGTATGTGCCTAATTCTATAGGTGATTGGAATCAGAGAAATGGGTCAGGTGGATGTGTGAGTAATCGACCTGGTTTGTTGAAGTGTGGTGATGGACACGGGTTTGTGAAGGTGGCAAGAGTCAAATATCCGGACACATCGATAGCAGCATCGTTAAAATCAGGAATGAGTGACAAAGAGTGTGAGCAGGAGTGCCTAAGAAATTGTTCTTGCACTGCATATTTGAGCACTGAAAATAAGGGACTGTTGATTGCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
B_lectin DUF3403 PAN_2 Pkinase Pkinase_Tyr S_locus_glycop

Protein Analysis

399

Amino Acids

44.62

Weight (kDa)

6.33

Isoelectric Point (pI)

39.57

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 83 - 193 6.4e-37 D-mannose binding lectin
S_locus_glycop PF00954 242 - 319 5.3e-12 S-locus glycoprotein domain
PAN_2 PF08276 343 - 392 1.9e-12 PAN-like domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000112)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g03320 FvH4_3g03322 FvH4_3g03323 FvH4_3g03340 FvH4_3g03350 FvH4_3g03351 FvH4_3g03370 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g06140 FvH4_6g00257 FvH4_6g00257 FvH4_6g00270 FvH4_6g00300 FvH4_6g20800 FvH4_6g20800 FvH4_6g20800 FvH4_6g20800 FvH4_6g20800
malus_domestica MD05G1232700.v1.1 MD05G1327700.v1.1 MD05G1327800.v1.1 MD05G1327900.v1.1 MD05G1328000.v1.1 MD05G1328200.v1.1 MD05G1328300.v1.1 MD05G1328500.v1.1 MD05G1332000.v1.1 MD05G1332100.v1.1 MD10G1307600.v1.1 MD10G1307800.v1.1
prunus_persica Prupe.4G031900_v2.0.a1 Prupe.4G032000_v2.0.a1 Prupe.4G032000_v2.0.a1 Prupe.4G032100_v2.0.a1 Prupe.4G032200_v2.0.a1 Prupe.4G032200_v2.0.a1 Prupe.4G032200_v2.0.a1
pyrus_communis pycom05g30180 pycom05g30190 pycom05g30200 pycom05g30210 pycom10g25920 pycom10g25930
rosa_chinensis RchiOBHm_Chr2g0130831 RchiOBHm_Chr2g0132531 RchiOBHm_Chr2g0132541 RchiOBHm_Chr3g0455681 RchiOBHm_Chr3g0476681 RchiOBHm_Chr3g0476761 RchiOBHm_Chr3g0476771 RchiOBHm_Chr3g0476791 RchiOBHm_Chr3g0476801 RchiOBHm_Chr3g0476811 RchiOBHm_Chr4g0413551 RchiOBHm_Chr4g0413561 RchiOBHm_Chr5g0002911 RchiOBHm_Chr5g0005071 RchiOBHm_Chr5g0005101 RchiOBHm_Chr5g0005111 RchiOBHm_Chr5g0005121 RchiOBHm_Chr5g0005131 RchiOBHm_Chr5g0005141 RchiOBHm_Chr5g0005161 RchiOBHm_Chr5g0005171 RchiOBHm_Chr5g0006341 RchiOBHm_Chr5g0046161 RchiOBHm_Chr5g0046171 RchiOBHm_Chr5g0046181 RchiOBHm_Chr5g0046221 RchiOBHm_Chr5g0046231 RchiOBHm_Chr7g0224061 RchiOBHm_Chr7g0224081 RchiOBHm_Chr7g0224101 RchiOBHm_Chr7g0224111 RchiOBHm_Chr7g0224121
rosa_laevigata RLG00000010193 RLG00000019146 RLG00000019148 RLG00000019149 RLG00000019150 RLG00000023750 RLG00000023751 RLG00000023753 RLG00000029486 RLG00000031068 RLG00000031069 RLG00000031284 RLG00000031285 RLG00000031286 RLG00000031289 RLG00000031290 RLG00000031291 RLG00000031292 RLG00000031293 RLG00000031294 RLG00000031295 RLG00000031296 RLG00000031297 RLG00000031363 RLG00000032618 RLG00000032619
rosa_multiflora Rmu_co8147584.1_g000001 Rmu_co8205828.1_g000001 Rmu_co8373645.1_g000001 Rmu_co8407679.1_g000001 Rmu_co8452561.1_g000001 Rmu_sc0001035.1_g000076 Rmu_sc0001884.1_g000026 Rmu_sc0001884.1_g000027 Rmu_sc0001884.1_g000035 Rmu_sc0002157.1_g000026 Rmu_sc0002399.1_g000006 Rmu_sc0002399.1_g000007 Rmu_sc0002883.1_g000010 Rmu_sc0003629.1_g000014 Rmu_sc0003884.1_g000004 Rmu_sc0007865.1_g000005 Rmu_sc0008085.1_g000013 Rmu_sc0008085.1_g000014 Rmu_sc0008085.1_g000016 Rmu_sc0008085.1_g000018 Rmu_sc0008432.1_g000004 Rmu_sc0008714.1_g000002 Rmu_sc0009296.1_g000008 Rmu_sc0009296.1_g000009 Rmu_sc0009296.1_g000011 Rmu_sc0010281.1_g000001 Rmu_sc0010281.1_g000002 Rmu_sc0010714.1_g000011 Rmu_sc0010714.1_g000016 Rmu_sc0011169.1_g000001 Rmu_sc0011169.1_g000007 Rmu_sc0013603.1_g000006 Rmu_sc0020478.1_g000003 Rmu_sc0020478.1_g000007 Rmu_sc0025106.1_g000012 Rmu_sc0032709.1_g000001 Rmu_sc0033028.1_g000001
rosa_roxburghii Rroxscaffold_1G00069570 Rroxscaffold_1G00069610 Rroxscaffold_1G00069620 Rroxscaffold_1G00070480 Rroxscaffold_1G00070490 Rroxscaffold_1G00070500 Rroxscaffold_1G00070510 Rroxscaffold_1G00070520 Rroxscaffold_1G00070530 Rroxscaffold_1G00070540 Rroxscaffold_1G00070550 Rroxscaffold_1G00070590 Rroxscaffold_1G00072950 Rroxscaffold_1G00073080 Rroxscaffold_2G00111810 Rroxscaffold_2G00111820 Rroxscaffold_2G00113530 Rroxscaffold_2G00113870 Rroxscaffold_6G00405010 Rroxscaffold_6G00405020 Rroxscaffold_6G00423590 Rroxscaffold_6G00424100
rosa_rugosa Rorug02G0293200 Rorug02G0293300 Rorug02G0293400 Rorug02G0305900 Rorug02G0305900 Rorug03G0009100 Rorug03G0157000 Rorug03G0157000 Rorug03G0304900 Rorug04G0400500 Rorug04G0415200 Rorug04G0415300 Rorug04G0415400 Rorug04G0415500 Rorug04G0421100 Rorug05G0068000 Rorug05G0068100 Rorug05G0068200 Rorug05G0068500 Rorug05G0224600 Rorug05G0224700
rosa_samantha Rh2CG331700 Rh2CG341600 Rh2CG341700 Rh2DG381200 Rh3DG071200 Rh3DG233400 Rh3DG233500 Rh3DG233600 Rh5AG043100 Rh5CG026000 Rh5CG047700 Rh5CG047800 Rh5CG047900 Rh5CG048000 Rh5CG048100 Rh5CG048300 Rh5CG056500 Rh5CG340500 Rh5CG340700 Rh5CG340800 Rh7AG365000
rosa_wichuraiana Rw0G002360 Rw0G002370 Rw0G012520 Rw0G018230 Rw0G019190 Rw2G027480 Rw2G029150 Rw3G005520 Rw3G005880 Rw3G005890 Rw3G018840 Rw3G018850 Rw3G018870 Rw3G018880 Rw3G020740 Rw5G002190 Rw5G004180 Rw5G004190 Rw5G004890 Rw5G013960 Rw5G014000 Rw5G028610 Rw7G030910 Rw7G030920

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 342
Acc16I TGCGCA 1 cut(s) 786
AccB1I GGYRCC 1 cut(s) 878
AccI GTMKAC 1 cut(s) 368
AccIII TCCGGA 1 cut(s) 1072
AciI CCGC 1 cut(s) 5
AcsI RAATTY 3 cut(s) 190, 213, 648
AcuI CTGAAG 2 cut(s) 143, 163
AfaI GTAC 1 cut(s) 659
AfeI AGCGCT 1 cut(s) 794
AfiI CCNNNNNNNGG 1 cut(s) 599
AflII CTTAAG 1 cut(s) 613
AgeI ACCGGT 1 cut(s) 201
AgsI TTSAA 4 cut(s) 53, 392, 821, 1024
AhlI ACTAGT 1 cut(s) 325
AjnI CCWGG 6 cut(s) 184, 453, 517, 688, 940, 1012
AjuI GAANNNNNNNTTGG 2 cut(s) 30, 62
AluBI AGCT 1 cut(s) 424
AluI AGCT 1 cut(s) 424
Alw21I GWGCWC 3 cut(s) 303, 356, 1172
Alw26I GTCTC 1 cut(s) 855
AlwNI CAGNNNCTG 1 cut(s) 776
Aor13HI TCCGGA 1 cut(s) 1072
Aor51HI AGCGCT 1 cut(s) 794
AoxI GGCC 2 cut(s) 692, 814
ApeKI GCWGC 1 cut(s) 1088
ApoI RAATTY 3 cut(s) 190, 213, 648
AseI ATTAAT 1 cut(s) 909
AsiGI ACCGGT 1 cut(s) 201
Asp700I GAANNNNTTC 1 cut(s) 1147
AspLEI GCGC 2 cut(s) 787, 795
AspS9I GGNCC 1 cut(s) 692
AsuHPI GGTGA 3 cut(s) 547, 977, 1043
AsuII TTCGAA 1 cut(s) 165
BaeI ACNNNNGTAYC 2 cut(s) 219, 252
BanI GGYRCC 1 cut(s) 878
BarI GAAGNNNNNNTAC 2 cut(s) 818, 850
BauI CACGAG 1 cut(s) 788
Bbv12I GWGCWC 3 cut(s) 303, 356, 1172
BbvI GCAGC 1 cut(s) 1100
BccI CCATC 5 cut(s) 125, 287, 703, 803, 1028
BciT130I CCWGG 6 cut(s) 186, 455, 519, 690, 942, 1014
BclI TGATCA 1 cut(s) 493
BcoDI GTCTC 1 cut(s) 855
BcuI ACTAGT 1 cut(s) 325
BfaI CTAG 4 cut(s) 195, 231, 326, 443
BfmI CTRYAG 1 cut(s) 960
BfoI RGCGCY 1 cut(s) 796
BfrI CTTAAG 1 cut(s) 613
BisI GCNGC 2 cut(s) 5, 1089
BlsI GCNGC 2 cut(s) 6, 1090
Bme1390I CCNGG 6 cut(s) 186, 455, 519, 690, 942, 1014
BmgT120I GGNCC 1 cut(s) 692
BmiI GGNNCC 1 cut(s) 880
BmrFI CCNGG 6 cut(s) 186, 455, 519, 690, 942, 1014
BmrI ACTGGG 1 cut(s) 558
BmsI GCATC 3 cut(s) 448, 647, 1100
BmuI ACTGGG 1 cut(s) 558
Bpu14I TTCGAA 1 cut(s) 165
Bsa29I ATCGAT 1 cut(s) 1082
BsaBI GATNNNNATC 1 cut(s) 972
BsaJI CCNNGG 3 cut(s) 184, 689, 941
BsaWI WCCGGW 2 cut(s) 201, 1072
BsaXI ACNNNNNCTCC 2 cut(s) 312, 342
Bsc4I CCNNNNNNNGG 1 cut(s) 599
Bse118I RCCGGY 1 cut(s) 201
Bse1I ACTGG 2 cut(s) 553, 866
Bse8I GATNNNNATC 1 cut(s) 972
BseAI TCCGGA 1 cut(s) 1072
BseBI CCWGG 6 cut(s) 186, 455, 519, 690, 942, 1014
BseCI ATCGAT 1 cut(s) 1082
BseDI CCNNGG 3 cut(s) 184, 689, 941
BseGI GGATG 7 cut(s) 133, 463, 496, 638, 748, 811, 1001
BseJI GATNNNNATC 1 cut(s) 972
BseLI CCNNNNNNNGG 1 cut(s) 599
BseMII CTCAG 1 cut(s) 239
BseNI ACTGG 2 cut(s) 553, 866
BseXI GCAGC 1 cut(s) 1100
BsgI GTGCAG 1 cut(s) 402
BshFI GGCC 2 cut(s) 694, 816
BshNI GGYRCC 1 cut(s) 878
BshTI ACCGGT 1 cut(s) 201
BshVI ATCGAT 1 cut(s) 1082
BsiHKAI GWGCWC 3 cut(s) 303, 356, 1172
BsiSI CCGG 2 cut(s) 202, 1073
BslFI GGGAC 2 cut(s) 111, 617
BslI CCNNNNNNNGG 1 cut(s) 599
BsmAI GTCTC 1 cut(s) 855
BsmFI GGGAC 2 cut(s) 111, 617
BsnI GGCC 2 cut(s) 694, 816
Bsp119I TTCGAA 1 cut(s) 165
Bsp1286I GDGCHC 3 cut(s) 303, 356, 1172
Bsp13I TCCGGA 1 cut(s) 1072
Bsp1407I TGTACA 1 cut(s) 657
Bsp143I GATC 1 cut(s) 493
BspACI CCGC 1 cut(s) 5
BspANI GGCC 2 cut(s) 694, 816
BspCNI CTCAG 1 cut(s) 238
BspDI ATCGAT 1 cut(s) 1082
BspEI TCCGGA 1 cut(s) 1072
BspLI GGNNCC 1 cut(s) 880
BspT104I TTCGAA 1 cut(s) 165
BspT107I GGYRCC 1 cut(s) 878
BspTI CTTAAG 1 cut(s) 613
BsrFI RCCGGY 1 cut(s) 201
BsrGI TGTACA 1 cut(s) 657
BsrI ACTGG 2 cut(s) 553, 866
BssAI RCCGGY 1 cut(s) 201
BssECI CCNNGG 3 cut(s) 184, 689, 941
BssMI GATC 1 cut(s) 493
BssSI CACGAG 1 cut(s) 788
Bst2BI CACGAG 1 cut(s) 788
Bst2UI CCWGG 6 cut(s) 186, 455, 519, 690, 942, 1014
Bst4CI ACNGT 4 cut(s) 250, 772, 873, 1188
Bst6I CTCTTC 2 cut(s) 72, 81
BstAFI CTTAAG 1 cut(s) 613
BstAUI TGTACA 1 cut(s) 657
BstBI TTCGAA 1 cut(s) 165
BstDEI CTNAG 2 cut(s) 225, 1139
BstF5I GGATG 7 cut(s) 133, 463, 496, 638, 748, 811, 1001
BstH2I RGCGCY 1 cut(s) 796
BstHHI GCGC 2 cut(s) 787, 795
BstKTI GATC 1 cut(s) 496
BstMAI GTCTC 1 cut(s) 855
BstMBI GATC 1 cut(s) 493
BstMWI GCNNNNNNNGC 2 cut(s) 10, 894
BstNI CCWGG 6 cut(s) 186, 455, 519, 690, 942, 1014
BstSCI CCNGG 6 cut(s) 184, 453, 517, 688, 940, 1012
BstSFI CTRYAG 1 cut(s) 960
BstV1I GCAGC 1 cut(s) 1100
Bsu15I ATCGAT 1 cut(s) 1082
BsuRI GGCC 2 cut(s) 694, 816
BsuTUI ATCGAT 1 cut(s) 1082
BtgZI GCGATG 1 cut(s) 681
BtsCI GGATG 7 cut(s) 133, 463, 496, 638, 748, 811, 1001
BtsI GCAGTG 1 cut(s) 1155
BtsIMutI CAGTG 5 cut(s) 255, 777, 878, 1155, 1170
CaiI CAGNNNCTG 1 cut(s) 776
CfoI GCGC 2 cut(s) 787, 795
Cfr10I RCCGGY 1 cut(s) 201
Cfr13I GGNCC 1 cut(s) 692
ClaI ATCGAT 1 cut(s) 1082
CsiI ACCWGGT 1 cut(s) 1012
Csp6I GTAC 1 cut(s) 658
CspAI ACCGGT 1 cut(s) 201
CviAII CATG 2 cut(s) 739, 801
CviJI RGCY 6 cut(s) 183, 424, 619, 694, 816, 897
CviKI_1 RGCY 6 cut(s) 183, 424, 619, 694, 816, 897
CviQI GTAC 1 cut(s) 658
DdeI CTNAG 2 cut(s) 225, 1139
DpnI GATC 1 cut(s) 495
DpnII GATC 1 cut(s) 493
Eam1104I CTCTTC 2 cut(s) 72, 81
EarI CTCTTC 2 cut(s) 72, 81
Eco47III AGCGCT 1 cut(s) 794
Eco57I CTGAAG 2 cut(s) 143, 163
EcoRII CCWGG 6 cut(s) 184, 453, 517, 688, 940, 1012
FaeI CATG 2 cut(s) 742, 804
FaqI GGGAC 2 cut(s) 111, 617
FatI CATG 2 cut(s) 738, 800
FbaI TGATCA 1 cut(s) 493
FblI GTMKAC 1 cut(s) 368
Fnu4HI GCNGC 2 cut(s) 5, 1089
FokI GGATG 7 cut(s) 140, 470, 483, 625, 755, 818, 1008
Fsp4HI GCNGC 2 cut(s) 5, 1089
FspBI CTAG 4 cut(s) 195, 231, 326, 443
FspI TGCGCA 1 cut(s) 786
GlaI GCGC 2 cut(s) 786, 794
GluI GCNGC 2 cut(s) 5, 1089
HaeII RGCGCY 1 cut(s) 796
HaeIII GGCC 2 cut(s) 694, 816
HapII CCGG 2 cut(s) 202, 1073
HhaI GCGC 2 cut(s) 787, 795
Hin1II CATG 2 cut(s) 742, 804
Hin6I GCGC 2 cut(s) 785, 793
HinP1I GCGC 2 cut(s) 785, 793
HincII GTYRAC 1 cut(s) 400
HindII GTYRAC 1 cut(s) 400
HinfI GANTC 4 cut(s) 605, 779, 973, 1062
HpaI GTTAAC 1 cut(s) 400
HpaII CCGG 2 cut(s) 202, 1073
HphI GGTGA 3 cut(s) 547, 977, 1043
Hpy166II GTNNAC 3 cut(s) 369, 400, 938
Hpy188I TCNGA 4 cut(s) 228, 633, 841, 978
Hpy188III TCNNGA 3 cut(s) 719, 1073, 1104
Hpy8I GTNNAC 3 cut(s) 369, 400, 938
HpyAV CCTTC 4 cut(s) 118, 820, 827, 1045
HpyCH4III ACNGT 4 cut(s) 250, 772, 873, 1188
HpyCH4V TGCA 9 cut(s) 13, 29, 263, 419, 596, 638, 755, 1155, 1160
HpyF10VI GCNNNNNNNGC 2 cut(s) 10, 894
HpyF3I CTNAG 2 cut(s) 225, 1139
Hsp92II CATG 2 cut(s) 742, 804
HspAI GCGC 2 cut(s) 785, 793
Kpn2I TCCGGA 1 cut(s) 1072
Ksp22I TGATCA 1 cut(s) 493
KspAI GTTAAC 1 cut(s) 400
Kzo9I GATC 1 cut(s) 493
Lsp1109I GCAGC 1 cut(s) 1100
LweI GCATC 3 cut(s) 448, 647, 1100
MabI ACCWGGT 1 cut(s) 1012
MaeI CTAG 4 cut(s) 195, 231, 326, 443
MaeIII GTNAC 5 cut(s) 579, 709, 772, 857, 1112
MalI GATC 1 cut(s) 495
MboI GATC 1 cut(s) 493
MboII GAAGA 6 cut(s) 41, 59, 62, 68, 169, 842
MfeI CAATTG 1 cut(s) 597
MhlI GDGCHC 3 cut(s) 303, 356, 1172
MlyI GAGTC 2 cut(s) 599, 1071
MmeI TCCRAC 1 cut(s) 190
MnlI CCTC 2 cut(s) 84, 715
MroI TCCGGA 1 cut(s) 1072
MroXI GAANNNNTTC 1 cut(s) 1147
MseI TTAA 6 cut(s) 399, 512, 566, 614, 909, 1097
MspA1I CMGCKG 1 cut(s) 7
MspCI CTTAAG 1 cut(s) 613
MspI CCGG 2 cut(s) 202, 1073
MspR9I CCNGG 6 cut(s) 186, 455, 519, 690, 942, 1014
MunI CAATTG 1 cut(s) 597
MvaI CCWGG 6 cut(s) 186, 455, 519, 690, 942, 1014
MwoI GCNNNNNNNGC 2 cut(s) 10, 894
NdeII GATC 1 cut(s) 493
NlaIII CATG 2 cut(s) 742, 804
NlaIV GGNNCC 1 cut(s) 880
NmuCI GTSAC 5 cut(s) 579, 709, 772, 857, 1112
NsbI TGCGCA 1 cut(s) 786
NspV TTCGAA 1 cut(s) 165
PdmI GAANNNNTTC 1 cut(s) 1147
PfeI GAWTC 2 cut(s) 779, 973
PfoI TCCNGGA 1 cut(s) 453
PinAI ACCGGT 1 cut(s) 201
PkrI GCNGC 2 cut(s) 6, 1090
PleI GAGTC 2 cut(s) 599, 1070
PpsI GAGTC 2 cut(s) 599, 1070
PshBI ATTAAT 1 cut(s) 909
PsiI TTATAA 1 cut(s) 342
Psp6I CCWGG 6 cut(s) 184, 453, 517, 688, 940, 1012
PspGI CCWGG 6 cut(s) 184, 453, 517, 688, 940, 1012
PspN4I GGNNCC 1 cut(s) 880
PspPI GGNCC 1 cut(s) 692
PstNI CAGNNNCTG 1 cut(s) 776
RsaI GTAC 1 cut(s) 659
RsaNI GTAC 1 cut(s) 658
SaqAI TTAA 6 cut(s) 399, 512, 566, 614, 909, 1097
SatI GCNGC 2 cut(s) 5, 1089
Sau3AI GATC 1 cut(s) 493
Sau96I GGNCC 1 cut(s) 692
SchI GAGTC 2 cut(s) 599, 1071
ScrFI CCNGG 6 cut(s) 186, 455, 519, 690, 942, 1014
SduI GDGCHC 3 cut(s) 303, 356, 1172
SetI ASST 9 cut(s) 293, 317, 426, 523, 614, 967, 994, 1015, 1056
SexAI ACCWGGT 1 cut(s) 1012
SfaNI GCATC 3 cut(s) 448, 647, 1100
SfcI CTRYAG 1 cut(s) 960
SfuI TTCGAA 1 cut(s) 165
SmlI CTYRAG 1 cut(s) 613
SmoI CTYRAG 1 cut(s) 613
SpeI ACTAGT 1 cut(s) 325
SsiI CCGC 1 cut(s) 5
SspMI CTAG 4 cut(s) 195, 231, 326, 443
StyD4I CCNGG 6 cut(s) 184, 453, 517, 688, 940, 1012
TaaI ACNGT 4 cut(s) 250, 772, 873, 1188
TaqI TCGA 3 cut(s) 165, 1009, 1082
TatI WGTACW 1 cut(s) 657
TauI GCSGC 1 cut(s) 7
TfiI GAWTC 2 cut(s) 779, 973
Tru1I TTAA 6 cut(s) 399, 512, 566, 614, 909, 1097
Tru9I TTAA 6 cut(s) 399, 512, 566, 614, 909, 1097
TscAI CASTG 5 cut(s) 255, 777, 878, 1162, 1177
TseFI GTSAC 5 cut(s) 579, 709, 772, 857, 1112
TseI GCWGC 1 cut(s) 1088
Tsp45I GTSAC 5 cut(s) 579, 709, 772, 857, 1112
TspDTI ATGAA 2 cut(s) 483, 539
TspRI CASTG 5 cut(s) 255, 777, 878, 1162, 1177
Vha464I CTTAAG 1 cut(s) 613
VspI ATTAAT 1 cut(s) 909
XapI RAATTY 3 cut(s) 190, 213, 648
XmiI GTMKAC 1 cut(s) 368
XmnI GAANNNNTTC 1 cut(s) 1147
XspI CTAG 4 cut(s) 195, 231, 326, 443
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.