RLG00000029486

serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr6
OG0000112
Physical Location & Seq
Reverse (-)
39399774 .. 39402943
3170 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000029486

Sequence Viewer

Length: 2079 bp
ATGGTTTTGACAGCTCTGCTTCTCTTCCTCCTCTTTCAGCTCTGCACTTCCAAGGACACCATGAGAGGGGGCGAAGAACAATTGAAGGATGTTAATGGTGACTATTTAGTGTCCAAAGAAAGCAAGTTTCAACTGGGTTTCTTCAGCCCTGGAAATTCTAGCTACCGGTATGTTGGAATTTGGTATTCTCAGACTAGAGTATCTGAAAAAACAGTGGTGTGGGTTGCAAACAGAAACAATCCCATCAATGATACCTCTGGTGTGCTCACATTTAACAGGTATGGAGAACTATTCCTTTATGCTCATAACATGGAGAGTATTCCTATATGGCCCACACGTGTGTCTCAGTCGGTCCAAAATGTTGATCCAAGCACTTTATCTGCACAGCTTTTGGATACAGGAAATTTAGTTATGTTCCAGGAAGATAATAATGATATCTTTATATGGCAAAGTTTTGATTATCCTACAGATACTCTGCTTCCAGGAATGAGACTTGGATTGAATAGGAAAACTGGGCTAGAATGGGTTATAACATCCTGGAAATCACAAGATGACCCTGGAACTGGGGACTACGCACATAGGCTTTATCCGAATCAGACTGCAATCCCCCAATTTTTTACATATAAAGGTTCAAGTAAGTACTGGCGACCTAATCCAGGGCCATCTGCTAGTGTGGTCACTAATCAAGACGAAACTTATTATTATTACCTGAATTACACCGATGGAATTGAAAGAACAATTTTGAATGGTTCAGAGTTACAGCGCCTTACATGGAGTGATGGAAACCATCAATGGAAGGAAATCTTTGCTGGACCAACATTCCGGTGTGACTGGTATGGACATTGTGGTGCCAACAGCAAATGTAGCCCAGACAATAATCAGCTGTTAGAGTGTGAATGTCTACCCGGTTTTGAACCAAAATCTGTCAATGAGTGGAATCAGAATGATGGGTCAGATGGATGTGTGAGTAAGCGAATGAAGTTTCTAAGTGTGAGAATGGAGAAGGCATATATGAACATTGAAAAAGAAGAAGGGGTTGTTGATTGTTTGACGTGGTATGATGATTTGATGGATATTTTAGTGTTCACAGAGATTGGACGAGATCTGTATGTTCGTGTGGATCGAATCGAATTAGAACTCCAACAAGATCAAATGGATTTAAGAAAATGCACTGAAGGTCAGTTACCAAATGAGCAGAAGGTTGCTGTAAAAAGGTTGTCTAAAACATCAGGACAAGGGACTGAAGAATTCAAAAATGAAGTTGCACTTATAGCAAGACTTCAACACCGTAATCTCGTAAAACTCTTAGGCTGTTGTATAAGGGGGGGAGAACGAATGTTAGTCCTGGAATACATGCCGAACAAAAGTTTGAACTCATTTCTCTTTGATCACACTAGACGGTCCTTCTTGGATTGGGAAAAGCGCTTTGAAATTATCAACGGGATTGCTCGTGGGATTCTGTATCTTCACCAAGACTCAAGATTGAGGATTATCCATAGAGATCTAAAAACCAGCAATATTCTTCTAGATGCTGAAATGAACCCAAAAATTTCCGATTTTGGCATGGCAAGAATATTTGACAGGGACCAAGTTCAGGATAAAACAAACCGAATTGTTGGAACATATGGCTACATGTCACCAGAGTATGCTGTGTTTGGCAGATTTTCTACTAAATCAGATGTCTTTAGTTTTGGGATCATATTGTTAGAGGTTGTAACTGGCAAAAGAAACAATGGTTTTTCTCAAGAGGATCCTTCCATGAACTTGATAAGACATGTTTGGGACCTCTGGAGAGAAGACAGAGCCTTAGAACTTGTGGATTCGACTCTGGAGTCATATAATTCTGATGAGGTTATGAGATGCATTCAAATTGCGCTCTTGTGCGTGCAAGAAGAATCAAAGGACCGACCAGCCATGTCTGCCATCGTTTTCATGTTGAGTGGTGAAACATCTCCTCCATCTCCTAATCAACCTGCATATGTTTTCAGAAGAACTTCCAGCACTGATGCTGATCCATCAGTACCGAAACGATTATATTCTATAAGCGACTTGACAATAACTGCAGTGGAAGCTCGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
B_lectin DUF3403 PAN_2 Pkinase Pkinase_Tyr S_locus_glycop

Protein Analysis

693

Amino Acids

79.52

Weight (kDa)

5.32

Isoelectric Point (pI)

42.43

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 71 - 181 6.4e-35 D-mannose binding lectin
S_locus_glycop PF00954 227 - 308 1.6e-14 S-locus glycoprotein domain
PK_Tyr_Ser-Thr PF07714 396 - 644 2.1e-45 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 397 - 642 5.8e-41 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000112)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g03320 FvH4_3g03322 FvH4_3g03323 FvH4_3g03340 FvH4_3g03350 FvH4_3g03351 FvH4_3g03370 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g06140 FvH4_6g00257 FvH4_6g00257 FvH4_6g00270 FvH4_6g00300 FvH4_6g20800 FvH4_6g20800 FvH4_6g20800 FvH4_6g20800 FvH4_6g20800
malus_domestica MD05G1232700.v1.1 MD05G1327700.v1.1 MD05G1327800.v1.1 MD05G1327900.v1.1 MD05G1328000.v1.1 MD05G1328200.v1.1 MD05G1328300.v1.1 MD05G1328500.v1.1 MD05G1332000.v1.1 MD05G1332100.v1.1 MD10G1307600.v1.1 MD10G1307800.v1.1
prunus_persica Prupe.4G031900_v2.0.a1 Prupe.4G032000_v2.0.a1 Prupe.4G032000_v2.0.a1 Prupe.4G032100_v2.0.a1 Prupe.4G032200_v2.0.a1 Prupe.4G032200_v2.0.a1 Prupe.4G032200_v2.0.a1
pyrus_communis pycom05g30180 pycom05g30190 pycom05g30200 pycom05g30210 pycom10g25920 pycom10g25930
rosa_chinensis RchiOBHm_Chr2g0130831 RchiOBHm_Chr2g0132531 RchiOBHm_Chr2g0132541 RchiOBHm_Chr3g0455681 RchiOBHm_Chr3g0476681 RchiOBHm_Chr3g0476761 RchiOBHm_Chr3g0476771 RchiOBHm_Chr3g0476791 RchiOBHm_Chr3g0476801 RchiOBHm_Chr3g0476811 RchiOBHm_Chr4g0413551 RchiOBHm_Chr4g0413561 RchiOBHm_Chr5g0002911 RchiOBHm_Chr5g0005071 RchiOBHm_Chr5g0005101 RchiOBHm_Chr5g0005111 RchiOBHm_Chr5g0005121 RchiOBHm_Chr5g0005131 RchiOBHm_Chr5g0005141 RchiOBHm_Chr5g0005161 RchiOBHm_Chr5g0005171 RchiOBHm_Chr5g0006341 RchiOBHm_Chr5g0046161 RchiOBHm_Chr5g0046171 RchiOBHm_Chr5g0046181 RchiOBHm_Chr5g0046221 RchiOBHm_Chr5g0046231 RchiOBHm_Chr7g0224061 RchiOBHm_Chr7g0224081 RchiOBHm_Chr7g0224101 RchiOBHm_Chr7g0224111 RchiOBHm_Chr7g0224121
rosa_laevigata RLG00000010193 RLG00000019146 RLG00000019148 RLG00000019149 RLG00000019150 RLG00000023750 RLG00000023751 RLG00000023753 RLG00000029486 RLG00000031068 RLG00000031069 RLG00000031284 RLG00000031285 RLG00000031286 RLG00000031289 RLG00000031290 RLG00000031291 RLG00000031292 RLG00000031293 RLG00000031294 RLG00000031295 RLG00000031296 RLG00000031297 RLG00000031363 RLG00000032618 RLG00000032619
rosa_multiflora Rmu_co8147584.1_g000001 Rmu_co8205828.1_g000001 Rmu_co8373645.1_g000001 Rmu_co8407679.1_g000001 Rmu_co8452561.1_g000001 Rmu_sc0001035.1_g000076 Rmu_sc0001884.1_g000026 Rmu_sc0001884.1_g000027 Rmu_sc0001884.1_g000035 Rmu_sc0002157.1_g000026 Rmu_sc0002399.1_g000006 Rmu_sc0002399.1_g000007 Rmu_sc0002883.1_g000010 Rmu_sc0003629.1_g000014 Rmu_sc0003884.1_g000004 Rmu_sc0007865.1_g000005 Rmu_sc0008085.1_g000013 Rmu_sc0008085.1_g000014 Rmu_sc0008085.1_g000016 Rmu_sc0008085.1_g000018 Rmu_sc0008432.1_g000004 Rmu_sc0008714.1_g000002 Rmu_sc0009296.1_g000008 Rmu_sc0009296.1_g000009 Rmu_sc0009296.1_g000011 Rmu_sc0010281.1_g000001 Rmu_sc0010281.1_g000002 Rmu_sc0010714.1_g000011 Rmu_sc0010714.1_g000016 Rmu_sc0011169.1_g000001 Rmu_sc0011169.1_g000007 Rmu_sc0013603.1_g000006 Rmu_sc0020478.1_g000003 Rmu_sc0020478.1_g000007 Rmu_sc0025106.1_g000012 Rmu_sc0032709.1_g000001 Rmu_sc0033028.1_g000001
rosa_roxburghii Rroxscaffold_1G00069570 Rroxscaffold_1G00069610 Rroxscaffold_1G00069620 Rroxscaffold_1G00070480 Rroxscaffold_1G00070490 Rroxscaffold_1G00070500 Rroxscaffold_1G00070510 Rroxscaffold_1G00070520 Rroxscaffold_1G00070530 Rroxscaffold_1G00070540 Rroxscaffold_1G00070550 Rroxscaffold_1G00070590 Rroxscaffold_1G00072950 Rroxscaffold_1G00073080 Rroxscaffold_2G00111810 Rroxscaffold_2G00111820 Rroxscaffold_2G00113530 Rroxscaffold_2G00113870 Rroxscaffold_6G00405010 Rroxscaffold_6G00405020 Rroxscaffold_6G00423590 Rroxscaffold_6G00424100
rosa_rugosa Rorug02G0293200 Rorug02G0293300 Rorug02G0293400 Rorug02G0305900 Rorug02G0305900 Rorug03G0009100 Rorug03G0157000 Rorug03G0157000 Rorug03G0304900 Rorug04G0400500 Rorug04G0415200 Rorug04G0415300 Rorug04G0415400 Rorug04G0415500 Rorug04G0421100 Rorug05G0068000 Rorug05G0068100 Rorug05G0068200 Rorug05G0068500 Rorug05G0224600 Rorug05G0224700
rosa_samantha Rh2CG331700 Rh2CG341600 Rh2CG341700 Rh2DG381200 Rh3DG071200 Rh3DG233400 Rh3DG233500 Rh3DG233600 Rh5AG043100 Rh5CG026000 Rh5CG047700 Rh5CG047800 Rh5CG047900 Rh5CG048000 Rh5CG048100 Rh5CG048300 Rh5CG056500 Rh5CG340500 Rh5CG340700 Rh5CG340800 Rh7AG365000
rosa_wichuraiana Rw0G002360 Rw0G002370 Rw0G012520 Rw0G018230 Rw0G019190 Rw2G027480 Rw2G029150 Rw3G005520 Rw3G005880 Rw3G005890 Rw3G018840 Rw3G018850 Rw3G018870 Rw3G018880 Rw3G020740 Rw5G002190 Rw5G004180 Rw5G004190 Rw5G004890 Rw5G013960 Rw5G014000 Rw5G028610 Rw7G030910 Rw7G030920

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 530
AasI GACNNNNNNGTC 1 cut(s) 1831
Acc36I ACCTGC 1 cut(s) 1981
AccB1I GGYRCC 1 cut(s) 848
AccI GTMKAC 1 cut(s) 901
AclWI GGATC 6 cut(s) 359, 1128, 1703, 1745, 1758, 2006
AcsI RAATTY 5 cut(s) 154, 177, 403, 1247, 1548
AcuI CTGAAG 3 cut(s) 127, 1194, 1263
AcvI CACGTG 1 cut(s) 338
AfaI GTAC 2 cut(s) 641, 2022
AfeI AGCGCT 1 cut(s) 1424
AfiI CCNNNNNNNGG 4 cut(s) 66, 563, 656, 1594
AflIII ACRYGT 4 cut(s) 335, 337, 1632, 1774
AgeI ACCGGT 1 cut(s) 165
AjiI CACGTC 1 cut(s) 1053
AjnI CCWGG 7 cut(s) 148, 417, 481, 536, 556, 655, 1344
AleI CACNNNNGTG 1 cut(s) 338
AluBI AGCT 6 cut(s) 14, 40, 162, 388, 883, 2072
AluI AGCT 6 cut(s) 14, 40, 162, 388, 883, 2072
Alw21I GWGCWC 1 cut(s) 267
Alw26I GTCTC 2 cut(s) 348, 484
AlwI GGATC 6 cut(s) 359, 1128, 1703, 1745, 1758, 2006
Aor51HI AGCGCT 1 cut(s) 1424
AoxI GGCC 2 cut(s) 329, 659
ApoI RAATTY 5 cut(s) 154, 177, 403, 1247, 1548
AsiGI ACCGGT 1 cut(s) 165
Asp700I GAANNNNTTC 1 cut(s) 1993
AspLEI GCGC 3 cut(s) 765, 1425, 1876
AspS9I GGNCC 8 cut(s) 330, 352, 659, 812, 1401, 1585, 1783, 1903
AsuC2I CCSGG 1 cut(s) 906
AsuHPI GGTGA 4 cut(s) 110, 1460, 1629, 1955
AvaII GGWCC 6 cut(s) 352, 812, 1401, 1585, 1783, 1903
BaeI ACNNNNGTAYC 2 cut(s) 183, 216
BamHI GGATCC 1 cut(s) 1750
BanI GGYRCC 1 cut(s) 848
BarI GAAGNNNNNNTAC 2 cut(s) 1167, 1199
BauI CACGAG 1 cut(s) 1449
BbrPI CACGTG 1 cut(s) 338
BbsI GAAGAC 1 cut(s) 1803
Bbv12I GWGCWC 1 cut(s) 267
BciT130I CCWGG 7 cut(s) 150, 419, 483, 538, 558, 657, 1346
BciVI GTATCC 1 cut(s) 388
BclI TGATCA 1 cut(s) 1387
BcnI CCSGG 1 cut(s) 906
BcoDI GTCTC 2 cut(s) 348, 484
BfaI CTAG 6 cut(s) 159, 195, 518, 669, 1395, 1526
BfmI CTRYAG 2 cut(s) 465, 2061
BfoI RGCGCY 2 cut(s) 766, 1426
BfuAI ACCTGC 1 cut(s) 1981
BfuI GTATCC 1 cut(s) 388
BglII AGATCT 2 cut(s) 1102, 1501
BmcAI AGTACT 1 cut(s) 641
Bme1390I CCNGG 8 cut(s) 150, 419, 483, 538, 558, 657, 906, 1346
Bme18I GGWCC 6 cut(s) 352, 812, 1401, 1585, 1783, 1903
BmgBI CACGTC 1 cut(s) 1053
BmgT120I GGNCC 8 cut(s) 330, 352, 659, 812, 1401, 1585, 1783, 1903
BmiI GGNNCC 4 cut(s) 850, 1586, 1752, 1784
BmrFI CCNGG 8 cut(s) 150, 419, 483, 538, 558, 657, 906, 1346
BmrI ACTGGG 3 cut(s) 143, 522, 573
BmsI GCATC 3 cut(s) 1519, 1850, 1996
BmuI ACTGGG 3 cut(s) 143, 522, 573
BpiI GAAGAC 1 cut(s) 1803
BpmI CTGGAG 2 cut(s) 1810, 1850
BpuEI CTTGAG 2 cut(s) 1462, 1728
BpuMI CCSGG 1 cut(s) 906
BsaAI YACGTR 1 cut(s) 338
BsaBI GATNNNNATC 1 cut(s) 2010
BsaJI CCNNGG 4 cut(s) 51, 148, 556, 656
BsaWI WCCGGW 2 cut(s) 165, 822
BsaXI ACNNNNNCTCC 2 cut(s) 1939, 1969
Bsc4I CCNNNNNNNGG 4 cut(s) 66, 563, 656, 1594
Bse118I RCCGGY 1 cut(s) 165
Bse1I ACTGG 6 cut(s) 138, 517, 568, 647, 836, 1723
Bse8I GATNNNNATC 1 cut(s) 2010
BseBI CCWGG 7 cut(s) 150, 419, 483, 538, 558, 657, 1346
BseDI CCNNGG 4 cut(s) 51, 148, 556, 656
BseGI GGATG 3 cut(s) 94, 533, 965
BseJI GATNNNNATC 1 cut(s) 2010
BseLI CCNNNNNNNGG 4 cut(s) 66, 563, 656, 1594
BseMII CTCAG 2 cut(s) 203, 359
BseNI ACTGG 6 cut(s) 138, 517, 568, 647, 836, 1723
BseRI GAGGAG 2 cut(s) 20, 1944
BsgI GTGCAG 2 cut(s) 28, 366
BshFI GGCC 2 cut(s) 331, 661
BshNI GGYRCC 1 cut(s) 848
BshTI ACCGGT 1 cut(s) 165
BsiHKAI GWGCWC 1 cut(s) 267
BsiSI CCGG 3 cut(s) 166, 823, 906
BslFI GGGAC 4 cut(s) 581, 1252, 1598, 1796
BslI CCNNNNNNNGG 4 cut(s) 66, 563, 656, 1594
BsmAI GTCTC 2 cut(s) 348, 484
BsmFI GGGAC 4 cut(s) 581, 1252, 1598, 1796
BsmI GAATGC 1 cut(s) 1863
BsnI GGCC 2 cut(s) 331, 661
Bsp1286I GDGCHC 1 cut(s) 267
Bsp143I GATC 9 cut(s) 364, 1102, 1120, 1147, 1387, 1501, 1695, 1750, 2011
BspANI GGCC 2 cut(s) 331, 661
BspCNI CTCAG 2 cut(s) 202, 358
BspLI GGNNCC 4 cut(s) 850, 1586, 1752, 1784
BspMAI CTGCAG 1 cut(s) 2065
BspMI ACCTGC 1 cut(s) 1981
BspPI GGATC 6 cut(s) 359, 1128, 1703, 1745, 1758, 2006
BspT107I GGYRCC 1 cut(s) 848
BsrFI RCCGGY 1 cut(s) 165
BsrI ACTGG 6 cut(s) 138, 517, 568, 647, 836, 1723
BssAI RCCGGY 1 cut(s) 165
BssECI CCNNGG 4 cut(s) 51, 148, 556, 656
BssMI GATC 9 cut(s) 364, 1102, 1120, 1147, 1387, 1501, 1695, 1750, 2011
BssSI CACGAG 1 cut(s) 1449
BssT1I CCWWGG 1 cut(s) 51
Bst2BI CACGAG 1 cut(s) 1449
Bst2UI CCWGG 7 cut(s) 150, 419, 483, 538, 558, 657, 1346
Bst4CI ACNGT 3 cut(s) 214, 1289, 1401
Bst6I CTCTTC 1 cut(s) 29
BstBAI YACGTR 1 cut(s) 338
BstC8I GCNNGC 1 cut(s) 1886
BstDEI CTNAG 5 cut(s) 189, 345, 986, 1306, 1807
BstENI CCTNNNNNAGG 1 cut(s) 654
BstF5I GGATG 3 cut(s) 94, 533, 965
BstH2I RGCGCY 2 cut(s) 766, 1426
BstHHI GCGC 3 cut(s) 765, 1425, 1876
BstKTI GATC 9 cut(s) 367, 1105, 1123, 1150, 1390, 1504, 1698, 1753, 2014
BstMAI GTCTC 2 cut(s) 348, 484
BstMBI GATC 9 cut(s) 364, 1102, 1120, 1147, 1387, 1501, 1695, 1750, 2011
BstMWI GCNNNNNNNGC 4 cut(s) 864, 1271, 1919, 2069
BstNI CCWGG 7 cut(s) 150, 419, 483, 538, 558, 657, 1346
BstNSI RCATGY 3 cut(s) 1357, 1636, 1778
BstSCI CCNGG 8 cut(s) 148, 417, 481, 536, 556, 655, 904, 1344
BstSFI CTRYAG 2 cut(s) 465, 2061
BstV2I GAAGAC 1 cut(s) 1803
BstX2I RGATCY 3 cut(s) 1102, 1501, 1750
BstYI RGATCY 3 cut(s) 1102, 1501, 1750
BsuI GTATCC 1 cut(s) 388
BsuRI GGCC 2 cut(s) 331, 661
BtrI CACGTC 1 cut(s) 1053
BtsCI GGATG 3 cut(s) 94, 533, 965
BtsI GCAGTG 1 cut(s) 2070
BtsIMutI CAGTG 4 cut(s) 219, 1170, 2001, 2070
BveI ACCTGC 1 cut(s) 1981
Cac8I GCNNGC 1 cut(s) 1886
CfoI GCGC 3 cut(s) 765, 1425, 1876
Cfr10I RCCGGY 1 cut(s) 165
Cfr13I GGNCC 8 cut(s) 330, 352, 659, 812, 1401, 1585, 1783, 1903
Csp6I GTAC 2 cut(s) 640, 2021
CspAI ACCGGT 1 cut(s) 165
CviQI GTAC 2 cut(s) 640, 2021
DdeI CTNAG 5 cut(s) 189, 345, 986, 1306, 1807
DpnI GATC 9 cut(s) 366, 1104, 1122, 1149, 1389, 1503, 1697, 1752, 2013
DpnII GATC 9 cut(s) 364, 1102, 1120, 1147, 1387, 1501, 1695, 1750, 2011
DrdI GACNNNNNNGTC 1 cut(s) 1831
DseDI GACNNNNNNGTC 1 cut(s) 1831
Eam1104I CTCTTC 1 cut(s) 29
EarI CTCTTC 1 cut(s) 29
Eco130I CCWWGG 1 cut(s) 51
Eco32I GATATC 1 cut(s) 436
Eco47I GGWCC 6 cut(s) 352, 812, 1401, 1585, 1783, 1903
Eco47III AGCGCT 1 cut(s) 1424
Eco57I CTGAAG 3 cut(s) 127, 1194, 1263
Eco72I CACGTG 1 cut(s) 338
EcoNI CCTNNNNNAGG 1 cut(s) 654
EcoO109I RGGNCCY 1 cut(s) 1783
EcoRI GAATTC 1 cut(s) 1247
EcoRII CCWGG 7 cut(s) 148, 417, 481, 536, 556, 655, 1344
EcoRV GATATC 1 cut(s) 436
EcoT14I CCWWGG 1 cut(s) 51
EcoT22I ATGCAT 1 cut(s) 1865
ErhI CCWWGG 1 cut(s) 51
FalI AAGNNNNNCTT 4 cut(s) 788, 820, 1251, 1283
FaqI GGGAC 4 cut(s) 581, 1252, 1598, 1796
FauNDI CATATG 2 cut(s) 1624, 1978
FbaI TGATCA 1 cut(s) 1387
FblI GTMKAC 1 cut(s) 901
FokI GGATG 3 cut(s) 101, 520, 972
FspBI CTAG 6 cut(s) 159, 195, 518, 669, 1395, 1526
GlaI GCGC 3 cut(s) 764, 1424, 1875
GsuI CTGGAG 2 cut(s) 1810, 1850
HaeII RGCGCY 2 cut(s) 766, 1426
HaeIII GGCC 2 cut(s) 331, 661
HapII CCGG 3 cut(s) 166, 823, 906
HhaI GCGC 3 cut(s) 765, 1425, 1876
Hin6I GCGC 3 cut(s) 763, 1423, 1874
HinP1I GCGC 3 cut(s) 763, 1423, 1874
HinfI GANTC 9 cut(s) 592, 937, 1125, 1456, 1475, 1820, 1825, 1832, 1895
HpaII CCGG 3 cut(s) 166, 823, 906
HphI GGTGA 4 cut(s) 110, 1460, 1629, 1955
Hpy166II GTNNAC 2 cut(s) 902, 1086
Hpy188III TCNNGA 8 cut(s) 686, 1230, 1479, 1526, 1595, 1745, 1789, 1829
Hpy8I GTNNAC 2 cut(s) 902, 1086
HpyAV CCTTC 8 cut(s) 79, 790, 997, 1025, 1169, 1192, 1414, 1764
HpyCH4III ACNGT 3 cut(s) 214, 1289, 1401
HpyCH4IV ACGT 2 cut(s) 337, 1052
HpyF10VI GCNNNNNNNGC 4 cut(s) 864, 1271, 1919, 2069
HpyF3I CTNAG 5 cut(s) 189, 345, 986, 1306, 1807
HpySE526I ACGT 2 cut(s) 337, 1052
HspAI GCGC 3 cut(s) 763, 1423, 1874
Ksp22I TGATCA 1 cut(s) 1387
Kzo9I GATC 9 cut(s) 364, 1102, 1120, 1147, 1387, 1501, 1695, 1750, 2011
LweI GCATC 3 cut(s) 1519, 1850, 1996
MaeI CTAG 6 cut(s) 159, 195, 518, 669, 1395, 1526
MaeII ACGT 2 cut(s) 337, 1052
MaeIII GTNAC 7 cut(s) 98, 676, 756, 827, 1182, 1635, 1714
MalI GATC 9 cut(s) 366, 1104, 1122, 1149, 1389, 1503, 1697, 1752, 2013
MboI GATC 9 cut(s) 364, 1102, 1120, 1147, 1387, 1501, 1695, 1750, 2011
MfeI CAATTG 1 cut(s) 80
MflI RGATCY 3 cut(s) 1102, 1501, 1750
MhlI GDGCHC 1 cut(s) 267
MlyI GAGTC 3 cut(s) 1469, 1819, 1841
MmeI TCCRAC 3 cut(s) 154, 1165, 1597
Mph1103I ATGCAT 1 cut(s) 1865
MroXI GAANNNNTTC 1 cut(s) 1993
MseI TTAA 3 cut(s) 93, 273, 1160
MslI CAYNNNNRTG 3 cut(s) 338, 823, 846
MspA1I CMGCKG 1 cut(s) 883
MspI CCGG 3 cut(s) 166, 823, 906
MspR9I CCNGG 8 cut(s) 150, 419, 483, 538, 558, 657, 906, 1346
MunI CAATTG 1 cut(s) 80
Mva1269I GAATGC 1 cut(s) 1863
MvaI CCWGG 7 cut(s) 150, 419, 483, 538, 558, 657, 1346
MwoI GCNNNNNNNGC 4 cut(s) 864, 1271, 1919, 2069
NciI CCSGG 1 cut(s) 906
NdeI CATATG 2 cut(s) 1624, 1978
NdeII GATC 9 cut(s) 364, 1102, 1120, 1147, 1387, 1501, 1695, 1750, 2011
NlaIV GGNNCC 4 cut(s) 850, 1586, 1752, 1784
NmuCI GTSAC 4 cut(s) 98, 676, 827, 1635
NsiI ATGCAT 1 cut(s) 1865
NspI RCATGY 3 cut(s) 1357, 1636, 1778
OliI CACNNNNGTG 1 cut(s) 338
PciI ACATGT 2 cut(s) 1632, 1774
PcsI WCGNNNNNNNCGW 1 cut(s) 1120
PctI GAATGC 1 cut(s) 1863
PdmI GAANNNNTTC 1 cut(s) 1993
PfeI GAWTC 6 cut(s) 592, 937, 1125, 1456, 1820, 1895
PfoI TCCNGGA 4 cut(s) 417, 481, 536, 1344
PinAI ACCGGT 1 cut(s) 165
PleI GAGTC 3 cut(s) 1469, 1819, 1840
PmaCI CACGTG 1 cut(s) 338
PmlI CACGTG 1 cut(s) 338
PpsI GAGTC 3 cut(s) 1469, 1819, 1840
Ppu21I YACGTR 1 cut(s) 338
PpuMI RGGWCCY 1 cut(s) 1783
PscI ACATGT 2 cut(s) 1632, 1774
PsiI TTATAA 1 cut(s) 530
Psp5II RGGWCCY 1 cut(s) 1783
Psp6I CCWGG 7 cut(s) 148, 417, 481, 536, 556, 655, 1344
PspCI CACGTG 1 cut(s) 338
PspGI CCWGG 7 cut(s) 148, 417, 481, 536, 556, 655, 1344
PspN4I GGNNCC 4 cut(s) 850, 1586, 1752, 1784
PspPI GGNCC 8 cut(s) 330, 352, 659, 812, 1401, 1585, 1783, 1903
PspPPI RGGWCCY 1 cut(s) 1783
PstI CTGCAG 1 cut(s) 2065
PsuI RGATCY 3 cut(s) 1102, 1501, 1750
PvuII CAGCTG 1 cut(s) 883
RsaI GTAC 2 cut(s) 641, 2022
RsaNI GTAC 2 cut(s) 640, 2021
RseI CAYNNNNRTG 3 cut(s) 338, 823, 846
SaqAI TTAA 3 cut(s) 93, 273, 1160
Sau3AI GATC 9 cut(s) 364, 1102, 1120, 1147, 1387, 1501, 1695, 1750, 2011
Sau96I GGNCC 8 cut(s) 330, 352, 659, 812, 1401, 1585, 1783, 1903
ScaI AGTACT 1 cut(s) 641
SchI GAGTC 3 cut(s) 1469, 1819, 1841
ScrFI CCNGG 8 cut(s) 150, 419, 483, 538, 558, 657, 906, 1346
SduI GDGCHC 1 cut(s) 267
SfaNI GCATC 3 cut(s) 1519, 1850, 1996
SfcI CTRYAG 2 cut(s) 465, 2061
SinI GGWCC 6 cut(s) 352, 812, 1401, 1585, 1783, 1903
SmiMI CAYNNNNRTG 3 cut(s) 338, 823, 846
SmlI CTYRAG 2 cut(s) 1477, 1743
SmoI CTYRAG 2 cut(s) 1477, 1743
SspI AATATT 2 cut(s) 1519, 1575
SspMI CTAG 6 cut(s) 159, 195, 518, 669, 1395, 1526
StyD4I CCNGG 8 cut(s) 148, 417, 481, 536, 556, 655, 904, 1344
StyI CCWWGG 1 cut(s) 51
TaaI ACNGT 3 cut(s) 214, 1289, 1401
TaiI ACGT 2 cut(s) 340, 1055
TaqI TCGA 4 cut(s) 1123, 1128, 1823, 2074
TaqII GACCGA 2 cut(s) 340, 1920
TatI WGTACW 1 cut(s) 639
TfiI GAWTC 6 cut(s) 592, 937, 1125, 1456, 1820, 1895
Tru1I TTAA 3 cut(s) 93, 273, 1160
Tru9I TTAA 3 cut(s) 93, 273, 1160
TscAI CASTG 4 cut(s) 219, 1177, 2008, 2070
TseFI GTSAC 4 cut(s) 98, 676, 827, 1635
Tsp45I GTSAC 4 cut(s) 98, 676, 827, 1635
TspDTI ATGAA 6 cut(s) 992, 1028, 1272, 1553, 1775, 1921
TspRI CASTG 4 cut(s) 219, 1177, 2008, 2070
VpaK11BI GGWCC 6 cut(s) 352, 812, 1401, 1585, 1783, 1903
XagI CCTNNNNNAGG 1 cut(s) 654
XapI RAATTY 5 cut(s) 154, 177, 403, 1247, 1548
XbaI TCTAGA 1 cut(s) 1525
XceI RCATGY 3 cut(s) 1357, 1636, 1778
XmiI GTMKAC 1 cut(s) 901
XmnI GAANNNNTTC 1 cut(s) 1993
XspI CTAG 6 cut(s) 159, 195, 518, 669, 1395, 1526
ZrmI AGTACT 1 cut(s) 641
Zsp2I ATGCAT 1 cut(s) 1865
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.