divergent subfamily of APPLE domains
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 2 cut(s) | 175, 653 |
| AclWI | GGATC | 7 cut(s) | 147, 261, 345, 510, 543, 749, 781 |
| AcoI | YGGCCR | 2 cut(s) | 318, 722 |
| AcsI | RAATTY | 2 cut(s) | 50, 413 |
| AcuI | CTGAAG | 1 cut(s) | 81 |
| AfaI | GTAC | 1 cut(s) | 407 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 720 |
| AgsI | TTSAA | 9 cut(s) | 33, 47, 55, 86, 231, 331, 420, 620, 739 |
| AjnI | CCWGG | 1 cut(s) | 495 |
| AluBI | AGCT | 1 cut(s) | 704 |
| AluI | AGCT | 1 cut(s) | 704 |
| Alw21I | GWGCWC | 1 cut(s) | 706 |
| Alw26I | GTCTC | 1 cut(s) | 347 |
| AlwI | GGATC | 7 cut(s) | 147, 261, 345, 510, 543, 749, 781 |
| AoxI | GGCC | 3 cut(s) | 318, 659, 722 |
| ApeKI | GCWGC | 1 cut(s) | 650 |
| ApoI | RAATTY | 2 cut(s) | 50, 413 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 678 |
| AspLEI | GCGC | 1 cut(s) | 628 |
| AsuHPI | GGTGA | 2 cut(s) | 212, 381 |
| BalI | TGGCCA | 1 cut(s) | 320 |
| BanII | GRGCYC | 1 cut(s) | 706 |
| BauI | CACGAG | 1 cut(s) | 201 |
| Bbv12I | GWGCWC | 1 cut(s) | 706 |
| BbvI | GCAGC | 1 cut(s) | 662 |
| BccI | CCATC | 2 cut(s) | 164, 757 |
| BceAI | ACGGC | 1 cut(s) | 737 |
| BciT130I | CCWGG | 1 cut(s) | 497 |
| BcoDI | GTCTC | 1 cut(s) | 347 |
| BfaI | CTAG | 1 cut(s) | 278 |
| BfmI | CTRYAG | 1 cut(s) | 810 |
| BisI | GCNGC | 1 cut(s) | 651 |
| BlsI | GCNGC | 1 cut(s) | 652 |
| Bme1390I | CCNGG | 1 cut(s) | 497 |
| BmiI | GGNNCC | 1 cut(s) | 373 |
| BmrFI | CCNGG | 1 cut(s) | 497 |
| BmsI | GCATC | 4 cut(s) | 271, 602, 637, 719 |
| BsaBI | GATNNNNATC | 1 cut(s) | 138 |
| BsaWI | WCCGGW | 1 cut(s) | 391 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 720 |
| Bse3DI | GCAATG | 1 cut(s) | 274 |
| Bse8I | GATNNNNATC | 1 cut(s) | 138 |
| BseBI | CCWGG | 1 cut(s) | 497 |
| BseGI | GGATG | 1 cut(s) | 710 |
| BseJI | GATNNNNATC | 1 cut(s) | 138 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 720 |
| BseMI | GCAATG | 1 cut(s) | 274 |
| BseMII | CTCAG | 1 cut(s) | 599 |
| BseXI | GCAGC | 1 cut(s) | 662 |
| BshFI | GGCC | 3 cut(s) | 320, 661, 724 |
| BsiHKAI | GWGCWC | 1 cut(s) | 706 |
| BsiSI | CCGG | 1 cut(s) | 392 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 720 |
| BsmAI | GTCTC | 1 cut(s) | 347 |
| BsmBI | CGTCTC | 1 cut(s) | 347 |
| BsmI | GAATGC | 2 cut(s) | 615, 728 |
| BsnI | GGCC | 3 cut(s) | 320, 661, 724 |
| Bsp1286I | GDGCHC | 1 cut(s) | 706 |
| Bsp143I | GATC | 8 cut(s) | 139, 152, 253, 337, 502, 535, 754, 773 |
| BspACI | CCGC | 2 cut(s) | 175, 653 |
| BspANI | GGCC | 3 cut(s) | 320, 661, 724 |
| BspCNI | CTCAG | 1 cut(s) | 600 |
| BspLI | GGNNCC | 1 cut(s) | 373 |
| BspPI | GGATC | 7 cut(s) | 147, 261, 345, 510, 543, 749, 781 |
| BsrDI | GCAATG | 1 cut(s) | 274 |
| BssMI | GATC | 8 cut(s) | 139, 152, 253, 337, 502, 535, 754, 773 |
| BssSI | CACGAG | 1 cut(s) | 201 |
| Bst2BI | CACGAG | 1 cut(s) | 201 |
| Bst2UI | CCWGG | 1 cut(s) | 497 |
| Bst4CI | ACNGT | 1 cut(s) | 811 |
| BstC8I | GCNNGC | 2 cut(s) | 638, 726 |
| BstDEI | CTNAG | 1 cut(s) | 608 |
| BstF5I | GGATG | 1 cut(s) | 710 |
| BstHHI | GCGC | 1 cut(s) | 628 |
| BstKTI | GATC | 8 cut(s) | 142, 155, 256, 340, 505, 538, 757, 776 |
| BstMAI | GTCTC | 1 cut(s) | 347 |
| BstMBI | GATC | 8 cut(s) | 139, 152, 253, 337, 502, 535, 754, 773 |
| BstNI | CCWGG | 1 cut(s) | 497 |
| BstSCI | CCNGG | 1 cut(s) | 495 |
| BstSFI | CTRYAG | 1 cut(s) | 810 |
| BstV1I | GCAGC | 1 cut(s) | 662 |
| BstX2I | RGATCY | 3 cut(s) | 152, 253, 535 |
| BstYI | RGATCY | 3 cut(s) | 152, 253, 535 |
| BsuRI | GGCC | 3 cut(s) | 320, 661, 724 |
| BtgZI | GCGATG | 1 cut(s) | 58 |
| BtsCI | GGATG | 1 cut(s) | 710 |
| BtsI | GCAGTG | 1 cut(s) | 408 |
| BtsIMutI | CAGTG | 1 cut(s) | 408 |
| Cac8I | GCNNGC | 2 cut(s) | 638, 726 |
| CfoI | GCGC | 1 cut(s) | 628 |
| Csp6I | GTAC | 1 cut(s) | 406 |
| CviAII | CATG | 4 cut(s) | 25, 316, 350, 527 |
| CviJI | RGCY | 6 cut(s) | 295, 320, 557, 661, 704, 724 |
| CviKI_1 | RGCY | 6 cut(s) | 295, 320, 557, 661, 704, 724 |
| CviQI | GTAC | 1 cut(s) | 406 |
| DdeI | CTNAG | 1 cut(s) | 608 |
| DpnI | GATC | 8 cut(s) | 141, 154, 255, 339, 504, 537, 756, 775 |
| DpnII | GATC | 8 cut(s) | 139, 152, 253, 337, 502, 535, 754, 773 |
| EaeI | YGGCCR | 2 cut(s) | 318, 722 |
| Ecl136II | GAGCTC | 1 cut(s) | 704 |
| Eco24I | GRGCYC | 1 cut(s) | 706 |
| Eco53kI | GAGCTC | 1 cut(s) | 704 |
| Eco57I | CTGAAG | 1 cut(s) | 81 |
| EcoICRI | GAGCTC | 1 cut(s) | 704 |
| EcoRI | GAATTC | 1 cut(s) | 50 |
| EcoRII | CCWGG | 1 cut(s) | 495 |
| EcoT22I | ATGCAT | 1 cut(s) | 617 |
| EcoT38I | GRGCYC | 1 cut(s) | 706 |
| Esp3I | CGTCTC | 1 cut(s) | 347 |
| FaeI | CATG | 4 cut(s) | 28, 319, 353, 530 |
| FatI | CATG | 4 cut(s) | 24, 315, 349, 526 |
| Fnu4HI | GCNGC | 1 cut(s) | 651 |
| FokI | GGATG | 1 cut(s) | 697 |
| FriOI | GRGCYC | 1 cut(s) | 706 |
| Fsp4HI | GCNGC | 1 cut(s) | 651 |
| FspBI | CTAG | 1 cut(s) | 278 |
| GlaI | GCGC | 1 cut(s) | 627 |
| GluI | GCNGC | 1 cut(s) | 651 |
| HaeIII | GGCC | 3 cut(s) | 320, 661, 724 |
| HapII | CCGG | 1 cut(s) | 392 |
| HhaI | GCGC | 1 cut(s) | 628 |
| Hin1II | CATG | 4 cut(s) | 28, 319, 353, 530 |
| Hin6I | GCGC | 1 cut(s) | 626 |
| HinP1I | GCGC | 1 cut(s) | 626 |
| HinfI | GANTC | 3 cut(s) | 94, 227, 572 |
| HpaII | CCGG | 1 cut(s) | 392 |
| HphI | GGTGA | 2 cut(s) | 212, 381 |
| Hpy166II | GTNNAC | 1 cut(s) | 406 |
| Hpy188I | TCNGA | 3 cut(s) | 307, 673, 795 |
| Hpy188III | TCNNGA | 4 cut(s) | 33, 131, 278, 607 |
| Hpy8I | GTNNAC | 1 cut(s) | 406 |
| HpyCH4III | ACNGT | 1 cut(s) | 811 |
| HpyCH4V | TGCA | 6 cut(s) | 401, 615, 640, 650, 710, 744 |
| HpyF3I | CTNAG | 1 cut(s) | 608 |
| Hsp92II | CATG | 4 cut(s) | 28, 319, 353, 530 |
| HspAI | GCGC | 1 cut(s) | 626 |
| Kzo9I | GATC | 8 cut(s) | 139, 152, 253, 337, 502, 535, 754, 773 |
| LpnPI | CCDG | 9 cut(s) | 76, 277, 334, 405, 482, 509, 620, 650, 738 |
| Lsp1109I | GCAGC | 1 cut(s) | 662 |
| LweI | GCATC | 4 cut(s) | 271, 602, 637, 719 |
| MaeI | CTAG | 1 cut(s) | 278 |
| MaeIII | GTNAC | 1 cut(s) | 387 |
| MalI | GATC | 8 cut(s) | 141, 154, 255, 339, 504, 537, 756, 775 |
| MboI | GATC | 8 cut(s) | 139, 152, 253, 337, 502, 535, 754, 773 |
| MboII | GAAGA | 5 cut(s) | 59, 162, 209, 266, 727 |
| MflI | RGATCY | 3 cut(s) | 152, 253, 535 |
| MhlI | GDGCHC | 1 cut(s) | 706 |
| MlsI | TGGCCA | 1 cut(s) | 320 |
| MluCI | AATT | 6 cut(s) | 50, 240, 413, 514, 621, 787 |
| MluNI | TGGCCA | 1 cut(s) | 320 |
| MmeI | TCCRAC | 2 cut(s) | 349, 438 |
| MnlI | CCTC | 2 cut(s) | 493, 726 |
| Mox20I | TGGCCA | 1 cut(s) | 320 |
| Mph1103I | ATGCAT | 1 cut(s) | 617 |
| MroXI | GAANNNNTTC | 1 cut(s) | 678 |
| MscI | TGGCCA | 1 cut(s) | 320 |
| MslI | CAYNNNNRTG | 1 cut(s) | 597 |
| Msp20I | TGGCCA | 1 cut(s) | 320 |
| MspA1I | CMGCKG | 1 cut(s) | 653 |
| MspI | CCGG | 1 cut(s) | 392 |
| MspR9I | CCNGG | 1 cut(s) | 497 |
| Mva1269I | GAATGC | 2 cut(s) | 615, 728 |
| MvaI | CCWGG | 1 cut(s) | 497 |
| NdeII | GATC | 8 cut(s) | 139, 152, 253, 337, 502, 535, 754, 773 |
| NlaIII | CATG | 4 cut(s) | 28, 319, 353, 530 |
| NlaIV | GGNNCC | 1 cut(s) | 373 |
| NmuCI | GTSAC | 1 cut(s) | 387 |
| NsiI | ATGCAT | 1 cut(s) | 617 |
| PctI | GAATGC | 2 cut(s) | 615, 728 |
| PdmI | GAANNNNTTC | 1 cut(s) | 678 |
| PfeI | GAWTC | 3 cut(s) | 94, 227, 572 |
| PflFI | GACNNNGTC | 1 cut(s) | 185 |
| PkrI | GCNGC | 1 cut(s) | 652 |
| Psp124BI | GAGCTC | 1 cut(s) | 706 |
| Psp6I | CCWGG | 1 cut(s) | 495 |
| PspGI | CCWGG | 1 cut(s) | 495 |
| PspN4I | GGNNCC | 1 cut(s) | 373 |
| PsuI | RGATCY | 3 cut(s) | 152, 253, 535 |
| PsyI | GACNNNGTC | 1 cut(s) | 185 |
| RsaI | GTAC | 1 cut(s) | 407 |
| RsaNI | GTAC | 1 cut(s) | 406 |
| RseI | CAYNNNNRTG | 1 cut(s) | 597 |
| SacI | GAGCTC | 1 cut(s) | 706 |
| SatI | GCNGC | 1 cut(s) | 651 |
| Sau3AI | GATC | 8 cut(s) | 139, 152, 253, 337, 502, 535, 754, 773 |
| ScrFI | CCNGG | 1 cut(s) | 497 |
| SduI | GDGCHC | 1 cut(s) | 706 |
| SetI | ASST | 5 cut(s) | 236, 377, 526, 706, 817 |
| SfaNI | GCATC | 4 cut(s) | 271, 602, 637, 719 |
| SfcI | CTRYAG | 1 cut(s) | 810 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 597 |
| Sse9I | AATT | 6 cut(s) | 50, 240, 413, 514, 621, 787 |
| SsiI | CCGC | 2 cut(s) | 175, 653 |
| SspI | AATATT | 1 cut(s) | 327 |
| SspMI | CTAG | 1 cut(s) | 278 |
| SstI | GAGCTC | 1 cut(s) | 706 |
| StyD4I | CCNGG | 1 cut(s) | 495 |
| TaaI | ACNGT | 1 cut(s) | 811 |
| TaqI | TCGA | 1 cut(s) | 817 |
| TasI | AATT | 6 cut(s) | 50, 240, 413, 514, 621, 787 |
| TfiI | GAWTC | 3 cut(s) | 94, 227, 572 |
| TscAI | CASTG | 1 cut(s) | 408 |
| TseFI | GTSAC | 1 cut(s) | 387 |
| TseI | GCWGC | 1 cut(s) | 650 |
| Tsp45I | GTSAC | 1 cut(s) | 387 |
| TspDTI | ATGAA | 5 cut(s) | 132, 305, 564, 615, 721 |
| TspRI | CASTG | 1 cut(s) | 408 |
| Tth111I | GACNNNGTC | 1 cut(s) | 185 |
| XapI | RAATTY | 2 cut(s) | 50, 413 |
| XbaI | TCTAGA | 1 cut(s) | 277 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 565 |
| XmnI | GAANNNNTTC | 1 cut(s) | 678 |
| XspI | CTAG | 1 cut(s) | 278 |
| Zsp2I | ATGCAT | 1 cut(s) | 617 |