RLG00000031295

serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
Physical Location & Seq
Reverse (-)
3824852 .. 3825886
1035 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000031295

Sequence Viewer

Length: 1035 bp
ATGTTACTGAAAGCTCTACTTCTCATCCTCCTTTTCCAACTGTCCATAACATGGAACGAAGAGCAAGTAAACGATGGTAACCTTTTAGTGTCCAAAGGAAACAACTTTGAATTGGGTTTCTTCAGCCCCAGAAACTCTAGCTACCGCTATGTTGGAATTTGGTATTCCATGTCTCAGATATCTGACCAAACAGTGGTGTGGGTGGCAAACAGAAACAACCCCATCAATGATCCATCAGGCGTTGTCACAATAAACAGGTATGGAAAACTAGTCATTTATGCTCACAATATGGAGAACGTTCCTATATGGTCTGCAAATATGTCTCGGTCAGTCATAAACACAAACCTCTTATCTGCACAACTTTTAGATACAGGAAACTTAGTTCTGACCCAGGATGGTAAAACTGAAAGCTTTATTATATGGCAGGGTTTTGATTACCCTGCAGATACTCTAATCCCTGGTATGAAACTTGGGGTGAGTTGGAAAACTGGTTTAGAGTGGTTTTTAACATCTTGGAAGTCACAAGATGACCCTGGAACTGGGGACTATAGCCATAGGCTTCATTGGAACCAGACGGCTATGCTACAATATTTTCTGTTCAAGGGTTTAACTACTAGGGTTTGGAGAAGTGATCCTGAGCCTCGGCGCAGTTTTGTAATTAGTAATAAGGATGAAACGTATTACCTACAATCTAGTGATAACTCCACTATAAAATTTAGAATGGTTGTGAATGATTCTGGGTTATTGCAGCATTTGACATGGAATGATGGTGACCATCAATGGAAGGAACTATGGGCTGCACCGAAATACCGTTGTGACTTGTATGGACAGTGTGGTGCCTATAGTAAATGTAACCCTGACAATATTAATATGTTTGAGTGTGAGTGTTTACCAGGGTATGAACCTAAATCTATAAATGACTGGAATCAGAATGATGGGTCAGAGGGGTGTCTGAGTAAGCGAGTTGGAGTGTCAAAGTGTGGAGTTGAAGATGGATTTTTAGAGGTGGCAAGGGTGAAAGCTCTAGACCATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

345

Amino Acids

39.31

Weight (kDa)

5.57

Isoelectric Point (pI)

34.44

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 64 - 173 1.3e-33 D-mannose binding lectin
S_locus_glycop PF00954 216 - 304 4.3e-19 S-locus glycoprotein domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000112)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g03320 FvH4_3g03322 FvH4_3g03323 FvH4_3g03340 FvH4_3g03350 FvH4_3g03351 FvH4_3g03370 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g06140 FvH4_6g00257 FvH4_6g00257 FvH4_6g00270 FvH4_6g00300 FvH4_6g20800 FvH4_6g20800 FvH4_6g20800 FvH4_6g20800 FvH4_6g20800
malus_domestica MD05G1232700.v1.1 MD05G1327700.v1.1 MD05G1327800.v1.1 MD05G1327900.v1.1 MD05G1328000.v1.1 MD05G1328200.v1.1 MD05G1328300.v1.1 MD05G1328500.v1.1 MD05G1332000.v1.1 MD05G1332100.v1.1 MD10G1307600.v1.1 MD10G1307800.v1.1
prunus_persica Prupe.4G031900_v2.0.a1 Prupe.4G032000_v2.0.a1 Prupe.4G032000_v2.0.a1 Prupe.4G032100_v2.0.a1 Prupe.4G032200_v2.0.a1 Prupe.4G032200_v2.0.a1 Prupe.4G032200_v2.0.a1
pyrus_communis pycom05g30180 pycom05g30190 pycom05g30200 pycom05g30210 pycom10g25920 pycom10g25930
rosa_chinensis RchiOBHm_Chr2g0130831 RchiOBHm_Chr2g0132531 RchiOBHm_Chr2g0132541 RchiOBHm_Chr3g0455681 RchiOBHm_Chr3g0476681 RchiOBHm_Chr3g0476761 RchiOBHm_Chr3g0476771 RchiOBHm_Chr3g0476791 RchiOBHm_Chr3g0476801 RchiOBHm_Chr3g0476811 RchiOBHm_Chr4g0413551 RchiOBHm_Chr4g0413561 RchiOBHm_Chr5g0002911 RchiOBHm_Chr5g0005071 RchiOBHm_Chr5g0005101 RchiOBHm_Chr5g0005111 RchiOBHm_Chr5g0005121 RchiOBHm_Chr5g0005131 RchiOBHm_Chr5g0005141 RchiOBHm_Chr5g0005161 RchiOBHm_Chr5g0005171 RchiOBHm_Chr5g0006341 RchiOBHm_Chr5g0046161 RchiOBHm_Chr5g0046171 RchiOBHm_Chr5g0046181 RchiOBHm_Chr5g0046221 RchiOBHm_Chr5g0046231 RchiOBHm_Chr7g0224061 RchiOBHm_Chr7g0224081 RchiOBHm_Chr7g0224101 RchiOBHm_Chr7g0224111 RchiOBHm_Chr7g0224121
rosa_laevigata RLG00000010193 RLG00000019146 RLG00000019148 RLG00000019149 RLG00000019150 RLG00000023750 RLG00000023751 RLG00000023753 RLG00000029486 RLG00000031068 RLG00000031069 RLG00000031284 RLG00000031285 RLG00000031286 RLG00000031289 RLG00000031290 RLG00000031291 RLG00000031292 RLG00000031293 RLG00000031294 RLG00000031295 RLG00000031296 RLG00000031297 RLG00000031363 RLG00000032618 RLG00000032619
rosa_multiflora Rmu_co8147584.1_g000001 Rmu_co8205828.1_g000001 Rmu_co8373645.1_g000001 Rmu_co8407679.1_g000001 Rmu_co8452561.1_g000001 Rmu_sc0001035.1_g000076 Rmu_sc0001884.1_g000026 Rmu_sc0001884.1_g000027 Rmu_sc0001884.1_g000035 Rmu_sc0002157.1_g000026 Rmu_sc0002399.1_g000006 Rmu_sc0002399.1_g000007 Rmu_sc0002883.1_g000010 Rmu_sc0003629.1_g000014 Rmu_sc0003884.1_g000004 Rmu_sc0007865.1_g000005 Rmu_sc0008085.1_g000013 Rmu_sc0008085.1_g000014 Rmu_sc0008085.1_g000016 Rmu_sc0008085.1_g000018 Rmu_sc0008432.1_g000004 Rmu_sc0008714.1_g000002 Rmu_sc0009296.1_g000008 Rmu_sc0009296.1_g000009 Rmu_sc0009296.1_g000011 Rmu_sc0010281.1_g000001 Rmu_sc0010281.1_g000002 Rmu_sc0010714.1_g000011 Rmu_sc0010714.1_g000016 Rmu_sc0011169.1_g000001 Rmu_sc0011169.1_g000007 Rmu_sc0013603.1_g000006 Rmu_sc0020478.1_g000003 Rmu_sc0020478.1_g000007 Rmu_sc0025106.1_g000012 Rmu_sc0032709.1_g000001 Rmu_sc0033028.1_g000001
rosa_roxburghii Rroxscaffold_1G00069570 Rroxscaffold_1G00069610 Rroxscaffold_1G00069620 Rroxscaffold_1G00070480 Rroxscaffold_1G00070490 Rroxscaffold_1G00070500 Rroxscaffold_1G00070510 Rroxscaffold_1G00070520 Rroxscaffold_1G00070530 Rroxscaffold_1G00070540 Rroxscaffold_1G00070550 Rroxscaffold_1G00070590 Rroxscaffold_1G00072950 Rroxscaffold_1G00073080 Rroxscaffold_2G00111810 Rroxscaffold_2G00111820 Rroxscaffold_2G00113530 Rroxscaffold_2G00113870 Rroxscaffold_6G00405010 Rroxscaffold_6G00405020 Rroxscaffold_6G00423590 Rroxscaffold_6G00424100
rosa_rugosa Rorug02G0293200 Rorug02G0293300 Rorug02G0293400 Rorug02G0305900 Rorug02G0305900 Rorug03G0009100 Rorug03G0157000 Rorug03G0157000 Rorug03G0304900 Rorug04G0400500 Rorug04G0415200 Rorug04G0415300 Rorug04G0415400 Rorug04G0415500 Rorug04G0421100 Rorug05G0068000 Rorug05G0068100 Rorug05G0068200 Rorug05G0068500 Rorug05G0224600 Rorug05G0224700
rosa_samantha Rh2CG331700 Rh2CG341600 Rh2CG341700 Rh2DG381200 Rh3DG071200 Rh3DG233400 Rh3DG233500 Rh3DG233600 Rh5AG043100 Rh5CG026000 Rh5CG047700 Rh5CG047800 Rh5CG047900 Rh5CG048000 Rh5CG048100 Rh5CG048300 Rh5CG056500 Rh5CG340500 Rh5CG340700 Rh5CG340800 Rh7AG365000
rosa_wichuraiana Rw0G002360 Rw0G002370 Rw0G012520 Rw0G018230 Rw0G019190 Rw2G027480 Rw2G029150 Rw3G005520 Rw3G005880 Rw3G005890 Rw3G018840 Rw3G018850 Rw3G018870 Rw3G018880 Rw3G020740 Rw5G002190 Rw5G004180 Rw5G004190 Rw5G004890 Rw5G013960 Rw5G014000 Rw5G028610 Rw7G030910 Rw7G030920

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 836
AccB7I CCANNNNNTGG 2 cut(s) 51, 193
AciI CCGC 1 cut(s) 145
AclI AACGTT 1 cut(s) 297
AclWI GGATC 2 cut(s) 224, 626
AcsI RAATTY 2 cut(s) 156, 713
AcuI CTGAAG 1 cut(s) 106
AfiI CCNNNNNNNGG 3 cut(s) 51, 193, 539
AgsI TTSAA 3 cut(s) 110, 601, 989
AhlI ACTAGT 1 cut(s) 268
AjnI CCWGG 4 cut(s) 390, 457, 532, 892
AloI GAACNNNNNNTCC 2 cut(s) 366, 398
AluBI AGCT 4 cut(s) 14, 141, 411, 1022
AluI AGCT 4 cut(s) 14, 141, 411, 1022
Alw26I GTCTC 2 cut(s) 177, 327
AlwI GGATC 2 cut(s) 224, 626
ApeKI GCWGC 2 cut(s) 748, 797
ApoI RAATTY 2 cut(s) 156, 713
AseI ATTAAT 1 cut(s) 867
AspLEI GCGC 1 cut(s) 648
AsuHPI GGTGA 3 cut(s) 487, 782, 1027
BanI GGYRCC 1 cut(s) 836
BbvI GCAGC 2 cut(s) 760, 784
BccI CCATC 8 cut(s) 68, 230, 241, 389, 761, 783, 929, 986
BceAI ACGGC 1 cut(s) 591
BciT130I CCWGG 4 cut(s) 392, 459, 534, 894
BcoDI GTCTC 2 cut(s) 177, 327
BcuI ACTAGT 1 cut(s) 268
BfaI CTAG 5 cut(s) 138, 269, 615, 693, 1025
BfmI CTRYAG 3 cut(s) 441, 547, 841
BisI GCNGC 2 cut(s) 749, 798
BlsI GCNGC 2 cut(s) 750, 799
Bme1390I CCNGG 4 cut(s) 392, 459, 534, 894
BmiI GGNNCC 2 cut(s) 569, 838
BmrFI CCNGG 4 cut(s) 392, 459, 534, 894
BmrI ACTGGG 1 cut(s) 549
BmuI ACTGGG 1 cut(s) 549
Bpu10I CCTNAGC 1 cut(s) 636
BsaJI CCNNGG 5 cut(s) 390, 457, 532, 641, 893
Bsc4I CCNNNNNNNGG 3 cut(s) 51, 193, 539
Bse1I ACTGG 3 cut(s) 493, 544, 926
BseBI CCWGG 4 cut(s) 392, 459, 534, 894
BseDI CCNNGG 5 cut(s) 390, 457, 532, 641, 893
BseGI GGATG 3 cut(s) 24, 400, 676
BseLI CCNNNNNNNGG 3 cut(s) 51, 193, 539
BseMII CTCAG 3 cut(s) 188, 627, 944
BseNI ACTGG 3 cut(s) 493, 544, 926
BseXI GCAGC 2 cut(s) 760, 784
BsgI GTGCAG 2 cut(s) 339, 783
BshNI GGYRCC 1 cut(s) 836
BslFI GGGAC 1 cut(s) 557
BslI CCNNNNNNNGG 3 cut(s) 51, 193, 539
BsmAI GTCTC 2 cut(s) 177, 327
BsmFI GGGAC 1 cut(s) 557
Bsp143I GATC 2 cut(s) 229, 631
BspACI CCGC 1 cut(s) 145
BspCNI CTCAG 3 cut(s) 187, 628, 945
BspLI GGNNCC 2 cut(s) 569, 838
BspMAI CTGCAG 1 cut(s) 445
BspPI GGATC 2 cut(s) 224, 626
BspQI GCTCTTC 1 cut(s) 54
BspT107I GGYRCC 1 cut(s) 836
BsrI ACTGG 3 cut(s) 493, 544, 926
BssECI CCNNGG 5 cut(s) 390, 457, 532, 641, 893
BssMI GATC 2 cut(s) 229, 631
Bst2UI CCWGG 4 cut(s) 392, 459, 534, 894
Bst4CI ACNGT 4 cut(s) 42, 193, 812, 831
Bst6I CTCTTC 1 cut(s) 54
BstDEI CTNAG 4 cut(s) 174, 379, 636, 953
BstEII GGTNACC 2 cut(s) 77, 770
BstF5I GGATG 3 cut(s) 24, 400, 676
BstHHI GCGC 1 cut(s) 648
BstKTI GATC 2 cut(s) 232, 634
BstMAI GTCTC 2 cut(s) 177, 327
BstMBI GATC 2 cut(s) 229, 631
BstNI CCWGG 4 cut(s) 392, 459, 534, 894
BstPI GGTNACC 2 cut(s) 77, 770
BstSCI CCNGG 4 cut(s) 390, 457, 532, 892
BstSFI CTRYAG 3 cut(s) 441, 547, 841
BstV1I GCAGC 2 cut(s) 760, 784
BtsCI GGATG 3 cut(s) 24, 400, 676
BtsIMutI CAGTG 2 cut(s) 198, 836
CfoI GCGC 1 cut(s) 648
CviAII CATG 3 cut(s) 51, 169, 759
DdeI CTNAG 4 cut(s) 174, 379, 636, 953
DpnI GATC 2 cut(s) 231, 633
DpnII GATC 2 cut(s) 229, 631
Eam1104I CTCTTC 1 cut(s) 54
EarI CTCTTC 1 cut(s) 54
Eco32I GATATC 1 cut(s) 180
Eco57I CTGAAG 1 cut(s) 106
Eco91I GGTNACC 2 cut(s) 77, 770
EcoO65I GGTNACC 2 cut(s) 77, 770
EcoRII CCWGG 4 cut(s) 390, 457, 532, 892
EcoRV GATATC 1 cut(s) 180
FaeI CATG 3 cut(s) 54, 172, 762
FalI AAGNNNNNCTT 1 cut(s) 35
FaqI GGGAC 1 cut(s) 557
FatI CATG 3 cut(s) 50, 168, 758
Fnu4HI GCNGC 2 cut(s) 749, 798
FokI GGATG 3 cut(s) 11, 407, 683
Fsp4HI GCNGC 2 cut(s) 749, 798
FspBI CTAG 5 cut(s) 138, 269, 615, 693, 1025
GlaI GCGC 1 cut(s) 647
GluI GCNGC 2 cut(s) 749, 798
HhaI GCGC 1 cut(s) 648
Hin1II CATG 3 cut(s) 54, 172, 762
Hin6I GCGC 1 cut(s) 646
HinP1I GCGC 1 cut(s) 646
HindIII AAGCTT 1 cut(s) 409
HinfI GANTC 2 cut(s) 734, 925
HphI GGTGA 3 cut(s) 487, 782, 1027
Hpy166II GTNNAC 2 cut(s) 70, 890
Hpy188I TCNGA 6 cut(s) 177, 184, 387, 930, 943, 954
Hpy188III TCNNGA 2 cut(s) 635, 1025
Hpy8I GTNNAC 2 cut(s) 70, 890
HpyAV CCTTC 1 cut(s) 778
HpyCH4III ACNGT 4 cut(s) 42, 193, 812, 831
HpyCH4IV ACGT 2 cut(s) 297, 677
HpyCH4V TGCA 5 cut(s) 314, 356, 443, 748, 800
HpyF3I CTNAG 4 cut(s) 174, 379, 636, 953
HpySE526I ACGT 2 cut(s) 297, 677
Hsp92II CATG 3 cut(s) 54, 172, 762
HspAI GCGC 1 cut(s) 646
Kzo9I GATC 2 cut(s) 229, 631
LguI GCTCTTC 1 cut(s) 54
Lsp1109I GCAGC 2 cut(s) 760, 784
MaeI CTAG 5 cut(s) 138, 269, 615, 693, 1025
MaeII ACGT 2 cut(s) 297, 677
MaeIII GTNAC 7 cut(s) 3, 77, 244, 519, 770, 815, 851
MalI GATC 2 cut(s) 231, 633
MboI GATC 2 cut(s) 229, 631
MboII GAAGA 3 cut(s) 71, 112, 1001
MluCI AATT 4 cut(s) 110, 156, 657, 713
MmeI TCCRAC 4 cut(s) 61, 133, 461, 946
MnlI CCTC 5 cut(s) 38, 356, 651, 937, 997
MseI TTAA 3 cut(s) 506, 608, 867
MspR9I CCNGG 4 cut(s) 392, 459, 534, 894
MvaI CCWGG 4 cut(s) 392, 459, 534, 894
NdeII GATC 2 cut(s) 229, 631
NlaIII CATG 3 cut(s) 54, 172, 762
NlaIV GGNNCC 2 cut(s) 569, 838
NmeAIII GCCGAG 1 cut(s) 622
NmuCI GTSAC 4 cut(s) 244, 519, 770, 815
PciSI GCTCTTC 1 cut(s) 54
PfeI GAWTC 2 cut(s) 734, 925
PflMI CCANNNNNTGG 2 cut(s) 51, 193
PkrI GCNGC 2 cut(s) 750, 799
PshBI ATTAAT 1 cut(s) 867
Psp1406I AACGTT 1 cut(s) 297
Psp6I CCWGG 4 cut(s) 390, 457, 532, 892
PspEI GGTNACC 2 cut(s) 77, 770
PspGI CCWGG 4 cut(s) 390, 457, 532, 892
PspN4I GGNNCC 2 cut(s) 569, 838
PstI CTGCAG 1 cut(s) 445
SapI GCTCTTC 1 cut(s) 54
SaqAI TTAA 3 cut(s) 506, 608, 867
SatI GCNGC 2 cut(s) 749, 798
Sau3AI GATC 2 cut(s) 229, 631
ScrFI CCNGG 4 cut(s) 392, 459, 534, 894
SfcI CTRYAG 3 cut(s) 441, 547, 841
SpeI ACTAGT 1 cut(s) 268
Sse9I AATT 4 cut(s) 110, 156, 657, 713
SsiI CCGC 1 cut(s) 145
SspI AATATT 2 cut(s) 590, 865
SspMI CTAG 5 cut(s) 138, 269, 615, 693, 1025
StyD4I CCNGG 4 cut(s) 390, 457, 532, 892
TaaI ACNGT 4 cut(s) 42, 193, 812, 831
TaiI ACGT 2 cut(s) 300, 680
TaqII GACCGA 1 cut(s) 315
TasI AATT 4 cut(s) 110, 156, 657, 713
TfiI GAWTC 2 cut(s) 734, 925
Tru1I TTAA 3 cut(s) 506, 608, 867
Tru9I TTAA 3 cut(s) 506, 608, 867
TscAI CASTG 2 cut(s) 198, 836
TseFI GTSAC 4 cut(s) 244, 519, 770, 815
TseI GCWGC 2 cut(s) 748, 797
Tsp45I GTSAC 4 cut(s) 244, 519, 770, 815
TspDTI ATGAA 4 cut(s) 479, 551, 687, 915
TspRI CASTG 2 cut(s) 198, 836
Van91I CCANNNNNTGG 2 cut(s) 51, 193
VspI ATTAAT 1 cut(s) 867
XapI RAATTY 2 cut(s) 156, 713
XbaI TCTAGA 1 cut(s) 1024
XspI CTAG 5 cut(s) 138, 269, 615, 693, 1025
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.